mRNA_17186 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353964 vs. uniprot
Match: A0A836CHR8_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHR8_9STRA) HSP 1 Score: 1350 bits (3495), Expect = 0.000e+0 Identity = 803/803 (100.00%), Postives = 803/803 (100.00%), Query Frame = 1
Query: 1 MGKRKHSSKDASEEEHLEAIALLQASAAAAEAKGDYAKALKRRRRLVKLTREDEDVQELEGMLHDGQMYLVDCNSGQVFTAERDDDGELVEVGRRDPLTRQVRIVAPPAVAGGVSSGGAGHEAQAVADGSGAGADAETAAKAAKLQRKLAKANAAGDDAXXXXXXXXXXXLGTDGSGTATTQAHRVVLDTGGSGSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACEAXXXXXXXXXXXAAGGVTGYSGELSRSGVPFGKWFPNATRVPGAQYDADVRISIVLFYTYVDPLWSPLRQQEAIRMAVKKAATLLPARRSARVQCAARQRLSAPHVPSMRSDDAYVRWMRAVFLGCELNLGGRLRVAREGFNATVSGTHAGVRAFADALRQRAARELWHTRRSAAARGAGGKWKASRRERAARSCQPRSFDAAFADTDFKYIDDLPLTQGGPKQPLAAPPLSKRGRCNPAPAARRAFSFTRAAAACCRGGVPLTAFKDLSVFPVNELVHYGITPEAAPLGRGGVHLPAEEYHKKMXXXXXXXXXXXXXXXXDNTVIIDVRNAYESAIGHFQPPAAEATLATASGGGDLVDPLMRVSTEFPRWLAAEDTKAKLAGKNVLMYCTGGKHFEVISXXXXXXXXXXXXXXXXXXXIRCERASALLRQEYGNDVGGVYQLQGGIEAYLKKFPEGGFWKGKNFTFDKRSAISAYAKQDTEKQEVLGECCMCAAKWDKYEGKRRCTTCPVPLLICQACLTKKADKDAANAHLLRCPLCKAEGKTVPDNRPRNGTSKTLEWNY 2409
MGKRKHSSKDASEEEHLEAIALLQASAAAAEAKGDYAKALKRRRRLVKLTREDEDVQELEGMLHDGQMYLVDCNSGQVFTAERDDDGELVEVGRRDPLTRQVRIVAPPAVAGGVSSGGAGHEAQAVADGSGAGADAETAAKAAKLQRKLAKANAAGDDAXXXXXXXXXXXLGTDGSGTATTQAHRVVLDTGGSGSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACEAXXXXXXXXXXXAAGGVTGYSGELSRSGVPFGKWFPNATRVPGAQYDADVRISIVLFYTYVDPLWSPLRQQEAIRMAVKKAATLLPARRSARVQCAARQRLSAPHVPSMRSDDAYVRWMRAVFLGCELNLGGRLRVAREGFNATVSGTHAGVRAFADALRQRAARELWHTRRSAAARGAGGKWKASRRERAARSCQPRSFDAAFADTDFKYIDDLPLTQGGPKQPLAAPPLSKRGRCNPAPAARRAFSFTRAAAACCRGGVPLTAFKDLSVFPVNELVHYGITPEAAPLGRGGVHLPAEEYHKKMXXXXXXXXXXXXXXXXDNTVIIDVRNAYESAIGHFQPPAAEATLATASGGGDLVDPLMRVSTEFPRWLAAEDTKAKLAGKNVLMYCTGGKHFEVISXXXXXXXXXXXXXXXXXXXIRCERASALLRQEYGNDVGGVYQLQGGIEAYLKKFPEGGFWKGKNFTFDKRSAISAYAKQDTEKQEVLGECCMCAAKWDKYEGKRRCTTCPVPLLICQACLTKKADKDAANAHLLRCPLCKAEGKTVPDNRPRNGTSKTLEWNY
Sbjct: 1 MGKRKHSSKDASEEEHLEAIALLQASAAAAEAKGDYAKALKRRRRLVKLTREDEDVQELEGMLHDGQMYLVDCNSGQVFTAERDDDGELVEVGRRDPLTRQVRIVAPPAVAGGVSSGGAGHEAQAVADGSGAGADAETAAKAAKLQRKLAKANAAGDDAXXXXXXXXXXXLGTDGSGTATTQAHRVVLDTGGSGSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACEAXXXXXXXXXXXAAGGVTGYSGELSRSGVPFGKWFPNATRVPGAQYDADVRISIVLFYTYVDPLWSPLRQQEAIRMAVKKAATLLPARRSARVQCAARQRLSAPHVPSMRSDDAYVRWMRAVFLGCELNLGGRLRVAREGFNATVSGTHAGVRAFADALRQRAARELWHTRRSAAARGAGGKWKASRRERAARSCQPRSFDAAFADTDFKYIDDLPLTQGGPKQPLAAPPLSKRGRCNPAPAARRAFSFTRAAAACCRGGVPLTAFKDLSVFPVNELVHYGITPEAAPLGRGGVHLPAEEYHKKMXXXXXXXXXXXXXXXXDNTVIIDVRNAYESAIGHFQPPAAEATLATASGGGDLVDPLMRVSTEFPRWLAAEDTKAKLAGKNVLMYCTGGKHFEVISXXXXXXXXXXXXXXXXXXXIRCERASALLRQEYGNDVGGVYQLQGGIEAYLKKFPEGGFWKGKNFTFDKRSAISAYAKQDTEKQEVLGECCMCAAKWDKYEGKRRCTTCPVPLLICQACLTKKADKDAANAHLLRCPLCKAEGKTVPDNRPRNGTSKTLEWNY 803
BLAST of jgi.p|Trimin1|353964 vs. uniprot
Match: A0A0L0GDD9_9EUKA (Rhodanese domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GDD9_9EUKA) HSP 1 Score: 273 bits (697), Expect = 2.400e-78 Identity = 172/438 (39.27%), Postives = 213/438 (48.63%), Query Frame = 1
Query: 1099 LNLGGRLRVAREGFNATVSGTHAGVRAFADALRQRAARELWHTRRSAAARGAGGKWKASRRERAARSCQPRSFDAAFADTDFKYIDDLPLTQGGPKQPLAAPPLSKRGRCNPAPAARRAFSFTRAAAACCRGGVPLTAFKDLSVFPVNELVHYGITPEAAPLGRGGVHLPAEEYHKKMXXXXXXXXXXXXXXXXDNTVIIDVRNAYESAIGHFQPPAAEATLATASGGGDLVDPLMRVSTEFPRWLAAEDTKAKLAGKNVLMYCTGGKHFEVISXXXXXXXXXXXXXXXXXXXIRCERASALLRQEYGNDVGGVYQLQGGIEAYLKKFPEGGFWKGKNFTFDKRSA--------ISAYAKQDTEKQE---------VLGECCMCAAKWDKYEGKRRCTTCPVPLLICQACLTKKADKDAANAHLLRCPLCKAEGKTVP 2361
L LGGRLRVA EG N+T+SGT VR FADAL AA+ G G D+KYIDDLP P AFKDL + PVNELV YG+ + APL GG HL ++YH+KM ++TVIIDVRN YE+ IG F E GG +DP MR ST+F +WLA ++TKA+L GK VLMYCTGG +RCERASALL E G D+GG++QLQGGIE YL++FPEGG W+GKN+ FDKR A + + +K+E VLG+CC+CA +WD+Y GK++C TC VP+L+C AC T K DK +RCPLC + TVP
Sbjct: 61 LQLGGRLRVANEGINSTMSGTADAVREFADALTNWAAKA-----------GKG--------------------PFLNPTPDYKYIDDLP---------------------------------------------PDRAFKDLKILPVNELVFYGVDEKHAPLVNGGTHLDPKDYHQKMKE--------------NDTVIIDVRNHYEAEIGRFDGQEKE-------GGAKYIDPKMRKSTDFKQWLAKDETKAELKGKQVLMYCTGG--------------------------VRCERASALLNTEMGKDLGGIFQLQGGIEKYLQEFPEGGHWQGKNYVFDKREAFGVGNLAGVGGVVEGGKKKKEKAGKGLSEGVLGKCCVCACEWDRYIGKKKCYTCGVPVLMCSACCTLKPDKTPGKELTVRCPLCVQQNITVP 375
BLAST of jgi.p|Trimin1|353964 vs. uniprot
Match: A0A7S2YFB6_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YFB6_9STRA) HSP 1 Score: 262 bits (670), Expect = 3.870e-74 Identity = 187/569 (32.86%), Postives = 238/569 (41.83%), Query Frame = 1
Query: 784 ELSRSGVPFGKWFPNATRVPGAQYD-ADVRISIVLFYTYVDPLWSPLRQQEAIRMAVKKAATLLPARRSARVQCAARQRLSAPHVPSMRSDDAYVRWMRAVFLGCELNLGGRLRVAREGFNATVSGTHAG--------VRAFADALRQRAARELWHTRRSAAARGAGGKWKASRRERAARSCQPRSFDAAFADTDFKYIDDLPLTQGGPKQPLAAPPLSKRGRCNPAPAARRAFSFTRAAAACCRGGVPLTAFKDLSVFPVNELVHYGITPEAAPLGRGGVHLPAEEYHKKMXXXXXXXXXXXXXXXXDNTVIIDVRNAYESAIGHFQPPAAEATL-------------ATASGGGDLVDPLMRVSTEFPRWLAAEDTKAKLAGKNVLMYCTGGKHFEVISXXXXXXXXXXXXXXXXXXXIRCERASALLRQEYGNDVGGVYQLQGGIEAYLKKFPEGGFWKGKNFTFDKRSAISAY-----------------AKQDTEKQEVLGE--CCMCAAKWDKYEGKRRCTTCPVPLLICQACLTKKADKDAANAHLLRCPLCKAEGKTVPDN 2367
E + P GKWFPNA + A ++S+VLFY YVDPLW Q+ + + A T + LGGR+RVAREG NAT+S + +R F L Q F F TDFK+IDDL G + FKD VFPV ELV+YG+ + APL +GG HL A+++HKK+ +TV++DVRN YE+AIG F +T A A+GG VDP MR ST+F WL +TK +L GK VL+YCTGG +RCERASA L G V GVYQLQGGIE YL+ +P+GG+W+GKNF FDKR AI +K + E L E CC+C WD+Y GK++C TC VP+L+C AC++ KA+KD N L+RCPLC E TV N
Sbjct: 90 EKAHGAKPLGKWFPNAVIIKSKDPPVATSKVSLVLFYQYVDPLWPESVTQQLMAYLCQIAQTRV--------------------------------------------LGGRIRVAREGVNATISSRDSSSGISAVNTIRHFTQDLLQ--------------------------------------FHDVFKKTDFKFIDDL----SGDRH-----------------------------------------FKDFKVFPVKELVYYGLDGDKAPLHKGGTHLSAQDFHKKLADK--------------DTVVVDVRNHYEAAIGRFDGQTVASTEEKGGTKNKDDAPNAAANGGATYVDPKMRKSTDFANWLNKSETKKQLEGKQVLLYCTGG--------------------------VRCERASAYLNNNMGEQVAGVYQLQGGIERYLQAYPDGGYWRGKNFVFDKREAIGIDNPDGDGGVVGNKKKHKPSKDKKSEGEFLPEMKCCICQKPWDRYIGKKKCLTCGVPVLMCDACMSSKANKDDQN--LIRCPLCIEEDVTVRAN 489
BLAST of jgi.p|Trimin1|353964 vs. uniprot
Match: A0A0V0QT17_PSEPJ (Rhodanese-like domain n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QT17_PSEPJ) HSP 1 Score: 264 bits (675), Expect = 1.630e-73 Identity = 181/493 (36.71%), Postives = 225/493 (45.64%), Query Frame = 1
Query: 871 ISIVLFYTYVDPLWSPLRQQEAIRMAVKKAATLLPARRSARVQCAARQRLSAPHVPSMRSDDAYVRWMRAVFLGCELNLGGRLRVAREGFNATVSGTHAGVRAFADALRQRAARELWHTRRSAAARGAGGKWKASRRERAARSCQPRSFDAAFADTDFKYIDDLPLTQGGPKQPLAAPPLSKRGRCNPAPAARRAFSFTRAAAACCRGGVPLTAFKDLSVFPVNELVHYGITPEAAPLGR-GGVHLPAEEYHKKMXXXXXXXXXXXXXXXXDNTVIIDVRNAYESAIGHFQPPAAEATLATASGGGDLVDPLMRVSTEFPRWLAAEDTKAKLAGKNVLMYCTGGKHFEVISXXXXXXXXXXXXXXXXXXXIRCERASALLRQEYGNDVGGVYQLQGGIEAYLKKFPEGGFWKGKNFTFDKRSAISAYAKQDTEKQEVLGECCMCAAKWDKYEGKRRCTTCPVPLLICQACLTKKADKDAANAHLLRCPLCKAE 2346
I+IVLFY Y++P W+ R +EA+R + +G EL LGGRLRVA EGFN T+SGT+ VR FA+ LR KW +P+SF+ FK+ID LP QG T F +L VF V ELV+YG+ + GGVHLP +EYHKKM DN+VIIDVRN YES IG FQPP + + +DP R STE P WL ++ + KL GKNVLMYCTGG +RCERASA L++E G V VYQL+GGIE Y+K+FPEGGFW GKN+TFDKR A AY K D +VL +C C WD+Y GK+RC+ C VPLL+C+ C +K DK LRC LC+ +
Sbjct: 276 ITIVLFYQYIEPEWTHPRFKEALRFTQQ--------------------------------------------IGKELGLGGRLRVAYEGFNGTISGTYDNVRQFAEELR---------------------KW------------EPQSFNKTL----FKFIDGLP--QG-------------------------------------------THFPNLKVFEVKELVNYGLDGFQPNIKEYGGVHLPPKEYHKKMME--------------DNSVIIDVRNTYESIIGRFQPPDNKKC--------EFIDPEWRKSTELPEWLRKQEIRDKLKGKNVLMYCTGG--------------------------VRCERASAYLKKEMGEQVKNVYQLEGGIEQYMKEFPEGGFWVGKNYTFDKRFAFGAYGK-DYRTDDVLSQCSGCKKPWDRYRGKKRCSACLVPLLVCKECQDQKLDK----LKNLRCTLCEQQ 589
BLAST of jgi.p|Trimin1|353964 vs. uniprot
Match: A0A835YMN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMN1_9STRA) HSP 1 Score: 262 bits (669), Expect = 5.340e-72 Identity = 186/524 (35.50%), Postives = 232/524 (44.27%), Query Frame = 1
Query: 871 ISIVLFYTYVDPLWSPLRQQEAIRMAVKKAATLLPARRSARVQCAARQRLSAPHVPSMRSDDAYVRWMRAVFLGCELNLGGRLRVAREGFNATVSGTHAGVRAFADALRQRAARELWHTRRSAAARGAGGKWKASRRERAARSCQPRSFDAAFADTDFKYIDDLPLTQGGPKQPLAAPPLSKRGRCNPAPAARRAFSFTRAAAACCRGGVPLTAFKDLSVFPVNELVHYGITPEAAPLGRG-GVHLPAEEYHKKMXXXXXXXXXXXXXXXXDNTVIIDVRNAYESAIGHFQPPAAEATLATASGGGDLVDPLMRVSTEFPRWLAAEDTKAKLAGKNVLMYCTGGKHFEVISXXXXXXXXXXXXXXXXXXXIRCERASALLRQEYGNDVGGVYQLQGGIEAYLKKFPEGGFWKGKNFTFDKRSAISAYAKQDTEKQE----------VLGECCMCAAKWDKYEGKRRCTTCPVPLLICQACLTKKADKDAANAHLLRCPLCKAEGKTVPDNRPRNGTSKTLEWNY 2409
+++VLFY YV+P W+ +EA++ CA DA G + GR+RVAREG N+T++GT G RAFA+ LR+ WK F +TDFK+ D LP Q AFK+L+VFPV+ELV YG+ + AP G G+HL A++YH+ M NTVIIDVRNAYESAIGHF PP SGG +L+DP MR ST+FP WL +E+TK KL GKNV+MYCTGG +RCERA+ALLRQ DV VYQL+GGI YL++F +GGFW GKN+ FDKR A A + E + VLG C C WD Y GKR+C C VPLL+C+ C ADK LRCP C +G P +TLE Y
Sbjct: 159 VTLVLFYQYVEPCWTAAEHEEALQF------------------CA----------------DA----------GKRCGITGRVRVAREGLNSTITGTKDGARAFAEELRR---------------------WKPQH----------------FGETDFKFTDSLPNGQ---------------------------------------------AFKELNVFPVSELVGYGLAHDKAPPLTGTGIHLNAQDYHEMMKQP--------------NTVIIDVRNAYESAIGHFAPP---------SGGAELIDPRMRKSTDFPGWLDSEETKKKLQGKNVMMYCTGG--------------------------VRCERATALLRQ-LDVDVKDVYQLKGGIHRYLEEFRDGGFWAGKNYVFDKRFAHGAVEPKQPEGESQGEDNGGRPGVLGNCASCDCPWDMYRGKRKCAACGVPLLVCRDCQAGNADKKKR----LRCPTCVQDGVL-----PTKSKDRTLEGIY 497
BLAST of jgi.p|Trimin1|353964 vs. uniprot
Match: A0A7S4JRU8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JRU8_9STRA) HSP 1 Score: 243 bits (621), Expect = 1.250e-65 Identity = 195/632 (30.85%), Postives = 250/632 (39.56%), Query Frame = 1
Query: 769 TGYSGELSRSGVPFGKWFPNATRVPGAQYDADVRISIVLFYTYVDPLWSPLRQQEAIRMAVKKAATLLPARRSARVQCAARQRLSAPHVPSMRSDDAYVRWMRAVFLGCELNLGGRLRVAREGFNATVS--------GTHAGVRAFADALRQRAARELWHTRRSAAARGAGGKWKASRRERAARSCQPRSFDAAFADTDFKYIDDLPLTQGGPKQPLAAPPLSKRGRCNPAPAARRAFSFTRAAAACCRGGVPLTAFKDLSVFPVNELVHYGITPEAAPLGRGGVHLPAEEYHKKMXXXXXXXXXXXXXXXXDNTVIIDVRNAYESAIGHFQ-----------------PPAAEATLATASG-------------------------------------------GGDLVDPLMRVSTEFPRWLAAEDTKAKLAGKNVLMYCTGGKHFEVISXXXXXXXXXXXXXXXXXXXIRCERASALLRQEYGNDVGGVYQLQGGIEAYLKKFPEGGFWKGKNFTFDKRSAISA-----------------YAKQDTEKQEV---------------LGECCMCAAKWDKYEGKRRCTTCPVPLLICQACLTKKADKDAANAHL-LRCPLCKAEGKTVP 2361
+G + E+ R G+ K PN G + + S+VLFY YV P +SP R A +++ + + NLGGR+RVA EG NATVS G G R+ AA L H A S FA TDFKYID LP P FK+L + PV ELV YGI + APL +GGVHL A EYHK + ++ V+IDVRN YE+AIG F +ATLA G + +DPLMR ST+FP WL+ DTK+KLAGK VLMYCTGG +RCERASA L + G +V GVYQL+GGIE YLK FP+GG+W+GKNF FDKR A+ A + Q T K++ + CC+C++ WD+Y GK+RC TC VP+L+C AC++ + D+ + L +RCPLCK EG TVP
Sbjct: 143 SGSAAEVDRDGI---KSEPNE----GGARRREAKASLVLFYQYVSPRFSPERVA------------------------------------------ALTEYLKRIAVA--RNLGGRIRVAAEGLNATVSSIDAPETSGDGGGDETVGKGGRRSAAESLRHF--------------------AXXXXXXDSRLKPFASTDFKYIDGLP---------------------------------------------PDRHFKELKILPVKELVFYGIDKKDAPLDKGGVHLDAPEYHKMLGR--------------EDAVVIDVRNHYEAAIGRFDGQQRHKTKEEXXXXXXXXXXGDATLAEEKSKEGQASEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEYLDPLMRKSTDFPSWLSRPDTKSKLAGKTVLMYCTGG--------------------------VRCERASAYLNTQMGGEVKGVYQLKGGIERYLKAFPDGGYWRGKNFVFDKREAVGAESTAGDGGVIQKKKGDKMSAQKTAKKKKKERDSGDDAEGVSDDMARCCVCSSPWDRYVGKKRCYTCGVPVLMCDACMSSRPDRRGSGRELDVRCPLCKEEGVTVP 618
BLAST of jgi.p|Trimin1|353964 vs. uniprot
Match: A0A7S3QDX3_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QDX3_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.840e-64 Identity = 161/464 (34.70%), Postives = 210/464 (45.26%), Query Frame = 1
Query: 1102 NLGGRLRVAREGFNATVSGTHAGVRAFADALRQRAARELWHTRRSAAARGAGGKWKASRRERAARSCQPRSFDAAFADTDFKYIDDLPLTQGGPKQPLAAPPLSKRGRCNPAPAARRAFSFTRAAAACCRGGVPLTAFKDLSVFPVNELVHYGITPEAAPLGRGGVHLPAEEYHKKMXXXXXXXXXXXXXXXXDNTVIIDVRNAYESAIGHFQ-PPAAEATLATA--------SGGGDLVDPLMRVSTEFPRWLAAEDTKAKLAGKNVLMYCTGGKHFEVISXXXXXXXXXXXXXXXXXXXIRCERASALLRQEYGNDVGGVYQLQGGIEAYLKKFPEGGFWKGKNFTFDKRSAISA-----------------YAKQDTEKQEVLGECCMCAAKWDKYEGKRRCTTCPVPLLICQACLTKKADKDAANAHLLRCPLCKAEGKTVP-------DNRPRNGTSKT 2394
N+GGR+RVA+EG N+T+S + A+ L H + ++FD F TDFK+IDDL P FK+L V PV ELV YGI E A GGVHL A +YH+ + +N V+IDVRN YE+ IG F A++ T G + +DP MR ST+F +WLA ++TK KL K VLMYCTGG IRCERASA L++E G++V GV+QLQGGIE YLK FP+GGFW+GKNF FDKR A+SA + +CC+C KWD+Y GK++C TC VP+L+C+ C++ K DK +RCPLC E TVP +N +N SK+
Sbjct: 318 NIGGRIRVAQEGVNSTLSAIDMPTKDGLTAMET-----LRHVIQDL-----------------------KNFDPVFNSTDFKFIDDLS---------------------------------------------PDRHFKELKVIPVQELVFYGIREEDAACQEGGVHLDATQYHEMLKK--------------ENAVVIDVRNHYEAVIGRFDGQDASDKGKGTXXXXXXXEKKSGAEYLDPKMRKSTDFTQWLAKDETKQKLKDKTVLMYCTGG--------------------------IRCERASAYLKREMGSEVEGVFQLQGGIERYLKAFPDGGFWRGKNFVFDKREAVSANDVNGDGGVIKNKXXXXXXXXXXXXXNLPAKCCVCEQKWDRYVGKKKCWTCGVPVLMCEQCMSLKPDKTPGMELKVRCPLCVEENVTVPASEVEFTENGVKNKDSKS 668
BLAST of jgi.p|Trimin1|353964 vs. uniprot
Match: A0A7S1ZZ35_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZZ35_9STRA) HSP 1 Score: 244 bits (623), Expect = 2.450e-64 Identity = 163/474 (34.39%), Postives = 208/474 (43.88%), Query Frame = 1
Query: 1087 LGCELNLGGRLRVAREGFNATVSGTHAGVRAFADALRQRAARELWHTRRSAAARGAGGKWKASRRERAARSCQPRSFDAA-FADTDFKYIDDLPLTQGGPKQPLAAPPLSKRGRCNPAPAARRAFSFTRAAAACCRGGVPLTAFKDLSVFPVNELVHYGITPEAAPLGRGGVHLPAEEYHKKMXXXXXXXXXXXXXXXXDNTVIIDVRNAYESAIGHFQPPAAEATLATAS-----------------GGGDLVDPLMRVSTEFPRWLAAEDTKAKLAGKNVLMYCTGGKHFEVISXXXXXXXXXXXXXXXXXXXIRCERASALLRQEYGNDVGGVYQLQGGIEAYLKKFPEGGFWKGKNFTFDKRSAISAYAKQ-----------------------------DTEKQEVLGECCMCAAKWDKYEGKRRCTTCPVPLLICQACLTKKADKDAANAHLLRCPLCKAEGKTVPDN 2367
+G E NLGGR+RVA EG NAT+S + D R + H + +FD+A F+ TDFKYIDDL P FK+L + PV ELV+YGI + APLG GGVHL EYH+ + D+ V+IDVRN YE+ IG F A+ G + VDPLMR ST+FP WL+ T+AKL K VLMYCTGG +RCERASA L+ + GN+V GVYQL+GGIE YL+ F +GG+W GKNF FDKR AI Q + ++ G+CC+C WD+Y GK++C TC VP+L+C +C++KK DK +RCPLC E TVP N
Sbjct: 581 VGRERNLGGRIRVASEGVNATISSVT--TKKDGDTTLMDPTRTIRHFTQDLI-----------------------NFDSATFSLTDFKYIDDL---------------------------------------------APDRHFKELKILPVKELVYYGIKEKDAPLGEGGVHLDPVEYHEMLGR--------------DDAVVIDVRNHYEADIGRFDGQMKRKCKEKATVTDDDAKKEKKNSPSDGSGAEYVDPLMRKSTDFPEWLSKPSTQAKLKDKTVLMYCTGG--------------------------VRCERASAYLKSQIGNEVKGVYQLKGGIEKYLQTFKDGGYWTGKNFVFDKREAIGVGNVQGDGGVIRKTPAQXXXXXXXXXXXXTSEESEANGDQIQGKCCICKVPWDRYVGKKKCYTCGVPVLMCDSCMSKKPDKTPGMELSVRCPLCVKENITVPAN 944
BLAST of jgi.p|Trimin1|353964 vs. uniprot
Match: A0A7S4N8T4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8T4_9STRA) HSP 1 Score: 234 bits (596), Expect = 3.150e-64 Identity = 154/447 (34.45%), Postives = 195/447 (43.62%), Query Frame = 1
Query: 1309 RSFDAA---FADTDFKYIDDLPLTQGGPKQPLAAPPLSKRGRCNPAPAARRAFSFTRAAAACCRGGVPLTAFKDLSVFPVNELVHYGITPEAAPLGRGGVHLPAEEYHKKMXXXXXXXXXXXXXXXXDNTVIIDVRNAYESAIGHFQ-----------------PPAAEATLATASG-------------------------------------------GGDLVDPLMRVSTEFPRWLAAEDTKAKLAGKNVLMYCTGGKHFEVISXXXXXXXXXXXXXXXXXXXIRCERASALLRQEYGNDVGGVYQLQGGIEAYLKKFPEGGFWKGKNFTFDKRSAISA-----------------YAKQDTEKQEV---------------LGECCMCAAKWDKYEGKRRCTTCPVPLLICQACLTKKADKDAANAHL-LRCPLCKAEGKTVP 2361
R FD+ FA TDFKYID LP P FK+L + PV ELV YGI + APL +GGVHL A EYHK + ++ V+IDVRN YE+AIG F +ATLA G + +DPLMR ST+FP WL+ DTK+KLAGK VLMYCTGG +RCERASA L + G +V GVYQL+GGIE YLK FP+GG+W+GKNF FDKR A+ A + Q T K++ + CC+C++ WD+Y GK+RC TC VP+L+C AC++ + D+ + L +RCPLCK EG TVP
Sbjct: 21 RRFDSRLKPFASTDFKYIDGLP---------------------------------------------PDRHFKELKILPVKELVFYGIDKKDAPLDKGGVHLDAPEYHKMLGR--------------EDAVVIDVRNHYEAAIGRFDGQQRHKTKEEXXXXXXXXXXGDATLAEEKSKEGQASEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEYLDPLMRKSTDFPSWLSRPDTKSKLAGKTVLMYCTGG--------------------------VRCERASAYLNTQMGGEVKGVYQLKGGIERYLKAFPDGGYWRGKNFVFDKREAVGAESTAGDGGVIQKKKGDKMSAQKTAKKKKKERDSGDDAEGVSDDMARCCVCSSPWDRYVGKKRCYTCGVPVLMCDACMSSRPDRRGSGRELDVRCPLCKEEGVTVP 382
BLAST of jgi.p|Trimin1|353964 vs. uniprot
Match: B7FU46_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FU46_PHATC) HSP 1 Score: 231 bits (588), Expect = 5.670e-63 Identity = 165/546 (30.22%), Postives = 228/546 (41.76%), Query Frame = 1
Query: 805 PFGKWFPNATRVPGA-QYDADVRISIVLFYTYVDPLWSPLRQQEAIRMAVKKAATLLPARRSARVQCAARQRLSAPHVPSMRSDDAYVRWMRAVFLGCELNLGGRLRVAREGFNATVSGTHAGVRAFADALRQRAARELWHTRRSAAARGAGGKWKASRRERAARSCQPRSFDAAFADTDFKYIDDLPLTQGGPKQPLAAPPLSKRGRCNPAPAARRAFSFTRAAAACCRGGVPLTAFKDLSVFPVNELVHYGITPEAAPLGRGGVHLPAEEYHKKMXXXXXXXXXXXXXXXXDNTVIIDVRNAYESAIGHFQPPAAEATLATASGGGDLVDPLMRVSTEFPRWLAAEDTKAKLAGKNVLMYCTGGKHFEVISXXXXXXXXXXXXXXXXXXXIRCERASALLRQEYGNDVGGVYQLQGGIEAYLKKFPEGGFWKGKNFTFDKRSAISA--------YAKQDTEKQEVLGECCMCAAKWDKYEGKRRCTTCPVPLLICQACLTKKADKDAANAHLLRCPLCKAEGKTVPDNR---PRNGTSKTLEWN 2406
P GKWFP A + + + S+VLFY Y++P W E++ + L RR+ LGGR+RVA EG NAT+S D AA L H R + F F TDFK+ID L + F + +FPV ELV YG++ E APL +GGVHL E+HK++ + TV++DVRN YE+ IG F + G + VDP+MR ST+F WL T+ +L GK VL+YCTGG +RCERASA L Q+ G+++ GVYQL+GGIE YL+ FP+GG W+GKNF FDKR A+ ++ + ++ +CC+C WD+Y GK++C TC VP+L+C +C++ ++ L+RCPLC E TV NG + T N
Sbjct: 80 PLGKWFPKAMVLKSTLPENLSSKASLVLFYQYINPAWP-----ESVVQTLMGFLYELAQRRT---------------------------------------LGGRIRVAPEGVNATISSV--------DTENSTAATTLRHFARDL-----------------------QRFHEGFLQTDFKFIDGLSTDRH---------------------------------------------FTNFKMFPVQELVFYGLSSEQAPLSKGGVHLEPNEFHKRLED--------------EGTVVVDVRNHYEALIGRFNGQEQQ----NEKGAAEYVDPMMRKSTDFSSWLERPGTQERLRGKQVLLYCTGG--------------------------VRCERASAYLNQKMGSNLKGVYQLRGGIERYLQAFPDGGHWRGKNFVFDKREAVGVDNPDGDGGIVRKGMKPIQIETQCCICHKPWDRYIGKKKCETCGVPVLMCDSCMSSIKKRNPKP--LVRCPLCIEENVTVRAEEVEYTNNGVNVTASTN 459 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353964 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17186 ID=mRNA_17186|Name=jgi.p|Trimin1|353964|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2545bp|location=Sequence derived from alignment at Contig_200:110332..123592- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGAAAGCGGAAGCACAGCAGCAAGGATGCATCCGAGGAGGAGCACCTback to top protein sequence of jgi.p|Trimin1|353964 >Trimin1|353964|estExt_Genemark1.C_Ctg_2000012 ID=Trimin1|353964|estExt_Genemark1.C_Ctg_2000012|Name=jgi.p|Trimin1|353964|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=804bp MGKRKHSSKDASEEEHLEAIALLQASAAAAEAKGDYAKALKRRRRLVKLTback to top mRNA from alignment at Contig_200:110332..123592- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17186 ID=mRNA_17186|Name=jgi.p|Trimin1|353964|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13261bp|location=Sequence derived from alignment at Contig_200:110332..123592- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_200:110332..123592- >mRNA_17186 ID=mRNA_17186|Name=jgi.p|Trimin1|353964|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2412bp|location=Sequence derived from alignment at Contig_200:110332..123592- (Tribonema minus UTEX_B_3156 )back to top |