Trimin1|348199|estExt_Genemark1.C_Ctg_200163 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348199
Unique NameTrimin1|348199|estExt_Genemark1.C_Ctg_200163
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length184
Homology
BLAST of jgi.p|Trimin1|348199 vs. uniprot
Match: A0A835Z9V0_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9V0_9STRA)

HSP 1 Score: 358 bits (920), Expect = 3.570e-125
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query:    1 MRSAVQLACTLVACLSLCSAFVSMSSGPSSRRQVIQTGVAAAGAALLPSVVSAAAPAKAKVYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGYGDKGVCVGDGECLVPPNETLKFTIILDKVAISP 183
            MRSAVQLACTLVACLSLCSAFVSMSSGPSSRRQVIQTGVAAAGAALLPSVVSAAAPAKAKVYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGYGDKGVCVGDGECLVPPNETLKFTIILDKVAISP
Sbjct:    1 MRSAVQLACTLVACLSLCSAFVSMSSGPSSRRQVIQTGVAAAGAALLPSVVSAAAPAKAKVYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGYGDKGVCVGDGECLVPPNETLKFTIILDKVAISP 183          
BLAST of jgi.p|Trimin1|348199 vs. uniprot
Match: A0A7S2UZW0_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZW0_9STRA)

HSP 1 Score: 151 bits (381), Expect = 4.130e-43
Identity = 87/190 (45.79%), Postives = 115/190 (60.53%), Query Frame = 0
Query:    1 MRSAVQLACTLVACLSLCSAF-VSMSSGPSSRRQVIQTGVA----AAGAALLPSVVSAAAPAKA--KVYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGYGDKGVCVGDGECLVPPNETLKFTIILDKVAISP 183
            M+ A  +   L A L   +AF +SM S P  + Q     V+    A G   +   V+ A+PA A  KV ETD G+ +V  K+G+GPRPR GD   + Y+GYL++G+ FD + G   GRKP  FK G KQVIP WEE++ YM  G E  +VVPA L YG KG+CV DGECL+ P+E LK+ + L +VA  P
Sbjct:    1 MKGAHFIVLALAAILGYSNAFSISMRSTPLMKAQSKFAAVSRRDFATGLVSVVGGVALASPALAAEKVIETDGGVKFVEVKKGNGPRPRRGDYCIVDYVGYLSDGRIFDSSTGP--GRKPLAFKFGGKQVIPGWEEVLPYMKAGGEVKMVVPASLAYGSKGICVEDGECLIQPDEELKYDLTLKRVAPPP 188          
BLAST of jgi.p|Trimin1|348199 vs. uniprot
Match: A0A6S9M8W0_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M8W0_HETAK)

HSP 1 Score: 147 bits (370), Expect = 1.950e-41
Identity = 78/158 (49.37%), Postives = 101/158 (63.92%), Query Frame = 0
Query:   26 SGPSSRRQVIQTGVAAAGAALLPSVVSAAAPAKAKVYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGYGDKGVCVGDGECLVPPNETLKFTIILDKVAISP 183
            S  ++RR  + T  AA+  A+ P V  AAA  K ++  T  G+ ++  K+GSGP PR GD+  + Y GYL +   FD +D    GRKP  FKLGA+QVIP WEE++ YM+ GAE   VVPAKL YG KGVC+  GECL+ P+  LKF I L +VAI P
Sbjct:   38 SAKATRRIFLST--AASSVAVAPLV--AAAKQKPEIETTPGGVKFIFIKQGSGPNPRKGDICLVDYTGYLPDNTVFDSSDAP--GRKPLAFKLGARQVIPGWEEVLPYMSVGAEVQAVVPAKLAYGSKGVCLDSGECLIKPDTDLKFDIKLKRVAIPP 189          
BLAST of jgi.p|Trimin1|348199 vs. uniprot
Match: A0A6H5KX02_9PHAE (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX02_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.630e-39
Identity = 71/159 (44.65%), Postives = 102/159 (64.15%), Query Frame = 0
Query:   31 RRQVIQTGVAAAGAALLPSVVSAAAPAKAK------VYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGYGDKGVCVGDGECLVPPNETLKFTIILDKVAISP 183
            RR VIQT  AA    L  +V+ A A A AK      V+ TD G+ ++V KEG+GP  RDGD   +++ G+L +G  FD ++    GRKP  F+LG +QVI  WEE++R MN GAE  +VVPA + +GDKG+C+ +G+CLV P   +++ + L +VA +P
Sbjct:   55 RRDVIQTASAAVAGLLSSAVLPAGALAAAKAEPNRRVFTTDGGVKFIVLKEGTGPVARDGDFCVVEFTGFLPDGAVFDASNAP--GRKPIAFQLGKRQVIKGWEEVLRLMNAGAEVQMVVPADMAFGDKGICIDNGDCLVKPGMDVRYDLQLKRVAPTP 211          
BLAST of jgi.p|Trimin1|348199 vs. uniprot
Match: A0A7S3EMP8_9RHOD (Peptidylprolyl isomerase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EMP8_9RHOD)

HSP 1 Score: 133 bits (335), Expect = 2.480e-36
Identity = 70/155 (45.16%), Postives = 92/155 (59.35%), Query Frame = 0
Query:   29 SSRRQVIQTGVAAAGAALLPSVVSAAAPAKAKVYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGYGDKGVCVGDGECLVPPNETLKFTIILDKVAISP 183
            S+RR+ +Q       + LL  +   +     +V + D+G+ YV  K G G  PR GDLV I Y+GYL+NGK FD ++    GRKP  F+ G  QVIP WEE +  M PG    +VVP +L YGD+GVCV    CL+ P ETL + I L +VAISP
Sbjct:   23 STRREFVQIASGTLLSGLLTGLPLKSDAKTPEVVKLDSGLEYVDEKIGQGSSPRAGDLVIINYVGYLSNGKVFDNSESP--GRKPLAFRFGQNQVIPGWEEGIASMKPGGVRKLVVPPRLAYGDRGVCVEGQGCLIQPGETLSYDIQLLRVAISP 175          
BLAST of jgi.p|Trimin1|348199 vs. uniprot
Match: W7U710_9STRA (Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U710_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.050e-35
Identity = 65/124 (52.42%), Postives = 81/124 (65.32%), Query Frame = 0
Query:   60 KVYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGYGDKGVCVGDGECLVPPNETLKFTIILDKVAISP 183
            K+ ET NG+ YV  K G G  PR GD V I YIG L++G  FD   G   G+KP  FK+GAKQVIP  EE +  M  G E  ++VPA L +G+KGVC   GECLVPPN  +K+ +IL +VA+SP
Sbjct:   93 KIRETPNGVKYVDVKVGEGESPRGGDYVIITYIGQLSDGTIFDGLHGP--GKKPLAFKIGAKQVIPGLEEALLSMQAGGERQLLVPADLAFGEKGVCTEKGECLVPPNTNVKYNVILKRVAVSP 214          
BLAST of jgi.p|Trimin1|348199 vs. uniprot
Match: A0A7S1TJB1_9RHOD (Peptidylprolyl isomerase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TJB1_9RHOD)

HSP 1 Score: 130 bits (328), Expect = 5.400e-35
Identity = 59/124 (47.58%), Postives = 81/124 (65.32%), Query Frame = 0
Query:   60 KVYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGYGDKGVCVGDGECLVPPNETLKFTIILDKVAISP 183
            K  +T +G+ Y     GSG  P++GD+V + Y+GYL+NG+ FD  +    GRKP  F LG ++VIPAWEE +  M  G    I+VP  L YGD+GVCV  GECL+PPNETL++ + L ++A  P
Sbjct:   77 KFVKTSSGLRYADVVTGSGSSPQEGDIVVVDYVGYLSNGQVFD--NSKSPGRKPLAFPLGQRKVIPAWEEALSTMKSGGTRKIIVPPSLAYGDRGVCVPSGECLIPPNETLEYDLKLLRIAPPP 198          
BLAST of jgi.p|Trimin1|348199 vs. uniprot
Match: A0A7S0G2J4_9RHOD (Peptidylprolyl isomerase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2J4_9RHOD)

HSP 1 Score: 122 bits (305), Expect = 1.170e-32
Identity = 59/110 (53.64%), Postives = 71/110 (64.55%), Query Frame = 0
Query:   74 KEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGYGDKGVCVGDGECLVPPNETLKFTIILDKVAISP 183
            K G G  PR GDLV + Y+GYL NGK FD ++    GRKP  F+ G  QVIP WEE +  M PG    ++VPAKL YGD+GVCV    CL+ P ETL + I L +VAISP
Sbjct:    1 KIGQGNSPRPGDLVIVNYVGYLANGKVFDNSESP--GRKPLAFRFGQNQVIPGWEEGMAGMKPGGVRKLIVPAKLAYGDRGVCVEGQGCLIQPGETLSYDIQLLRVAISP 108          
BLAST of jgi.p|Trimin1|348199 vs. uniprot
Match: A0A2V3IFP5_9FLOR (Peptidylprolyl isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFP5_9FLOR)

HSP 1 Score: 122 bits (305), Expect = 4.380e-32
Identity = 68/152 (44.74%), Postives = 93/152 (61.18%), Query Frame = 0
Query:   38 GVAAAGAALLPSVVSAAAPAKAK-----VYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGYGDKGVCVG-DGECLVPPNETLKFTIILDKVAISP 183
            G  AAGA+L+   +SA  PA AK       + ++GI Y   K GSG  P +GD V + Y+ +L+ GK FD        RK  VF++G +Q+IP  EE +  M PG E  +VVP KL YGDKGVC+  +G+CLVPP ETL +++ L +VA+ P
Sbjct:   11 GQLAAGASLV--ALSAIEPAVAKGSKPVFTKEESGISYYDIKTGSGASPIEGDFVIVDYLAFLSTGKIFD-------NRKGFVFQMGRRQIIPGLEEAISTMKPGGERRVVVPPKLAYGDKGVCLEKEGDCLVPPGETLGYSVTLQRVAVPP 153          
BLAST of jgi.p|Trimin1|348199 vs. uniprot
Match: R7QHV0_CHOCR (Peptidylprolyl isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHV0_CHOCR)

HSP 1 Score: 124 bits (312), Expect = 3.500e-31
Identity = 74/165 (44.85%), Postives = 99/165 (60.00%), Query Frame = 0
Query:   23 SMSSGPS-SRRQV--IQTGVAAAGAALLPSVVSAAAPAKAKVYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKAFDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGYGDKGVCVGDG-ECLVPPNETLKFTIILDKVAISP 183
            SM+S P+ SRRQV  +  G   A   L P+  + AA  + +  + ++GI Y   K GSG  P +GD V I Y  +L+NGK FD        RK  VF++G +QVIP  E  V  M PG E  +V+P  L YGD+GVC+G+  ECLVPP ETL +++ L +VAISP
Sbjct:  181 SMNSAPTFSRRQVSRLALGALLATTVLEPTGRALAAARRPEYIKDESGISYYDVKGGSGAGPINGDFVVIDYQAFLSNGKIFD-------NRKGFVFQMGQRQVIPGLETAVSTMKPGGERKVVIPPTLAYGDRGVCIGESKECLVPPGETLGYSVNLQRVAISP 338          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348199 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z9V0_9STRA3.570e-125100.00Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S2UZW0_9STRA4.130e-4345.79Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japoni... [more]
A0A6S9M8W0_HETAK1.950e-4149.37Peptidylprolyl isomerase n=1 Tax=Heterosigma akash... [more]
A0A6H5KX02_9PHAE1.630e-3944.65Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S3EMP8_9RHOD2.480e-3645.16Peptidylprolyl isomerase n=1 Tax=Rhodosorus marinu... [more]
W7U710_9STRA1.050e-3552.42Peptidylprolyl isomerase n=2 Tax=Monodopsidaceae T... [more]
A0A7S1TJB1_9RHOD5.400e-3547.58Peptidylprolyl isomerase n=1 Tax=Compsopogon caeru... [more]
A0A7S0G2J4_9RHOD1.170e-3253.64Peptidylprolyl isomerase n=1 Tax=Rhodosorus marinu... [more]
A0A2V3IFP5_9FLOR4.380e-3244.74Peptidylprolyl isomerase n=1 Tax=Gracilariopsis ch... [more]
R7QHV0_CHOCR3.500e-3144.85Peptidylprolyl isomerase n=1 Tax=Chondrus crispus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR046357Peptidyl-prolyl cis-trans isomerase domain superfamilyGENE3D3.10.50.40coord: 49..178
e-value: 2.3E-30
score: 107.2
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 79..176
e-value: 2.6E-20
score: 72.5
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 84..180
score: 19.95755
NoneNo IPR availablePANTHERPTHR43811FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPAcoord: 59..173
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 38..179
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..59
score: 8.102635

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_20contigContig_20:1225417..1227080 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348199mRNA_4199Tribonema minus UTEX_B_3156 mRNAContig_20 1225343..1227341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348199|estExt_Genemark1.C_Ctg_200163 ID=Trimin1|348199|estExt_Genemark1.C_Ctg_200163|Name=jgi.p|Trimin1|348199|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=184bp
MRSAVQLACTLVACLSLCSAFVSMSSGPSSRRQVIQTGVAAAGAALLPSV
VSAAAPAKAKVYETDNGILYVVRKEGSGPRPRDGDLVAIKYIGYLNNGKA
FDINDGSVAGRKPTVFKLGAKQVIPAWEEIVRYMNPGAEYNIVVPAKLGY
GDKGVCVGDGECLVPPNETLKFTIILDKVAISP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR046357PPIase_dom_sf
IPR001179PPIase_FKBP_dom
IPR006311TAT_signal