Trimin1|348193|estExt_Genemark1.C_Ctg_200155 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348193
Unique NameTrimin1|348193|estExt_Genemark1.C_Ctg_200155
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length286
Homology
BLAST of jgi.p|Trimin1|348193 vs. uniprot
Match: A0A835Z4A7_9STRA (tRNA/rRNA methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4A7_9STRA)

HSP 1 Score: 546 bits (1407), Expect = 5.110e-196
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0
Query:    1 MRSTEAFELWRPPGSGDLLDITSPTNPRIKTLHKRKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQRLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQRQHGVNT 285
            MRSTEAFELWRPPGSGDLLDITSPTNPRIKTLHKRKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQRLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQRQHGVNT
Sbjct:    1 MRSTEAFELWRPPGSGDLLDITSPTNPRIKTLHKRKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQRLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQRQHGVNT 285          
BLAST of jgi.p|Trimin1|348193 vs. uniprot
Match: A0A6H5L4S8_9PHAE (SpoU_sub_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4S8_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 6.810e-99
Identity = 159/280 (56.79%), Postives = 208/280 (74.29%), Query Frame = 0
Query:    3 STEAFELWRPPGSGDLLDITSPTNPRIKTL---HKRKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQRLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQR 279
            S+  + LWR    G  LDITS  NP++K +   HKR++RD  G++L EG RLV D ++ GL+P LV+    AL +  G  L A L+ LS+DVV +A  + V R CDTV+ QGVVA+V RP+LPLP T++  L+ DG+ DPGN+GT+VRTAA LG DAVV+TG+CVD W+PK +RASMGA+FR+PS+   +W+E  EL++ARG+ +YAADGGA  +H++  W+ PSALVVG+EA GLS AAR +L+ G I G+ +PL  GVESLNAAVAGAIVLGEAQRQR
Sbjct:   52 SSLPYGLWR--DRGGTLDITSARNPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVI----ALRASPGPRLQAALETLSADVVAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLEGGVESLNAAVAGAIVLGEAQRQR 325          
BLAST of jgi.p|Trimin1|348193 vs. uniprot
Match: A0A8J5X903_DIALT (SpoU_sub_bind domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X903_DIALT)

HSP 1 Score: 222 bits (566), Expect = 3.130e-68
Identity = 132/266 (49.62%), Postives = 169/266 (63.53%), Query Frame = 0
Query:   21 ITSPTNPRIKTLHK---RKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQRLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLP--LPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWE-VPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQRQ 280
            ITS  NP +K L +   R+ R+ +G +L+EG RLVTDAL AG   + VLV+   LA   G  L  +L  L + VV LA    +A AC TVSPQG+VA V  P     LP+   L LVLD +SDPGN+GT+VR AA  G DAVV  GAC D WSPKALR++MG  FR+P V    W + R  LQ  GL + AADGG A + +  V W  P A+V+GSEA GLS+A R DL  G +  + IP++ G++SLNAA+AG ++L E  RQR+
Sbjct:   15 ITSGKNPVVKALRRLESRRHRERDGLLLLEGLRLVTDALDAGFCAETVLVAEALLAQQPG--LQRVLAALPAGVVSLADEAALAAACTTVSPQGIVAAVRMPERTGALPDAASLVLVLDNLSDPGNVGTLVRGAAGFGCDAVVALGACADAWSPKALRSAMGGTFRLPIVPAQEWAQLRAQLQRAGLRVLAADGGVAASDYAAVDWRAPLAVVIGSEATGLSEAVRADLAAGSVCAVGIPMAAGLDSLNAAMAGTVLLSECARQRR 278          
BLAST of jgi.p|Trimin1|348193 vs. uniprot
Match: A0A7S0LQQ5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LQQ5_9EUKA)

HSP 1 Score: 210 bits (534), Expect = 2.870e-63
Identity = 121/264 (45.83%), Postives = 172/264 (65.15%), Query Frame = 0
Query:   21 ITSPTNPRIKTLHK---RKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQR-LSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQRQ 280
            ++S +NPRIK L K   +++RD  G +++EG RL+TDAL AG S D VL+S EAL +P G+ L+  L+  L ++ + +A    +A   DT +PQGVV ++ +P L LPE+    LVLD +SDPGN+GT++R+AA  GV++ ++   C D W  KALRA MGA  R+P V    + E   +L+  G    AAD    T +W V W +PSALVVGSEA GL++    D+D  +    RIPL+NGVESLNAA+AG++++ E  RQR+
Sbjct:   33 LSSTSNPRIKLLRKLQAKRARDKSGLMILEGHRLLTDALDAGYSADFVLLSEEALHAPEGARLARSLREVLRAEQLAIAPQSLIAELSDTQTPQGVVGMLQQPRLALPESPSFVLVLDRISDPGNLGTLLRSAAGAGVESALLLSGCTDPWGLKALRAGMGAQLRLPLVEVRGYAEAAGMLRRWGCHGVAADARGETDYWAVDWRQPSALVVGSEAHGLAEEVLSDVDTQLC---RIPLANGVESLNAAIAGSVMMYEVGRQRR 293          
BLAST of jgi.p|Trimin1|348193 vs. uniprot
Match: R1BHS4_EMIHU (RNA methyltransferase n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BHS4_EMIHU)

HSP 1 Score: 207 bits (528), Expect = 7.750e-63
Identity = 122/265 (46.04%), Postives = 157/265 (59.25%), Query Frame = 0
Query:   21 ITSPTNPRIKT---LHKRKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQRLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQRQHG 282
            + SP NPR+K    LH R+ R+  G +L+EG RL+ DAL AGLS D VLVS E L      AL  LL R+ +++    +        DT +P GV+A+  +P+L LP +  L LV D +SDPGN+GT++R +AA GVD  ++   C D W PKALRA MGA FRVP +   +W      L   G A+ AAD G  +AH++  W   SALVVGSEA G+S+    D           P +  +ESLNAAVAGAIVL EAQRQR  G
Sbjct:    6 LNSPNNPRLKLAKRLHARRQREKTGLILLEGQRLIADALDAGLSADFVLVSDEQLRD---GALDRLLARVPAEIAASTTAPLFRDVSDTTTPAGVLALFQKPILTLPPSPSLVLVCDSISDPGNLGTLLRASAAAGVDGCLLMAGCADPWGPKALRAGMGAQFRVPMMQVDSWAGAAASLVEWGCAIRAADAGGTSAHYDCDWRDASALVVGSEAHGISREVLAD-----------PRAGDLESLNAAVAGAIVLHEAQRQRMTG 256          
BLAST of jgi.p|Trimin1|348193 vs. uniprot
Match: A0A540V9T9_9CHLR (RNA methyltransferase n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540V9T9_9CHLR)

HSP 1 Score: 202 bits (515), Expect = 7.470e-61
Identity = 128/267 (47.94%), Postives = 168/267 (62.92%), Query Frame = 0
Query:   21 ITSPTNPRIKT---LHKRKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQRLSSD-VVCLA-SGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQRQHG 282
            ITS +NPRIK    LH+R+ R   GR+L+EG RLV DA +AG+ P++VL  PEA+A  G    + LLQ+L    V CLA S +  A   DTV+PQG++AVV  P  PLP    L L+LD V DPGN GT++RTA A GVD V++    VD ++ K +RA MGA FR+P     +W +  + L    + LY A+  A T + +V W +P+ALV+G EA G S AAR+         I IP+   VESLNAAVAGA++L EA RQR+HG
Sbjct:    2 ITSTSNPRIKEIRKLHRRRHRHESGRILLEGVRLVEDATQAGVRPEMVLYVPEAVA--GQERAARLLQQLQEQGVECLACSPEVFASVSDTVTPQGILAVVPLPHRPLPSQPTLVLILDQVRDPGNAGTLLRTAEAAGVDLVLLAPGTVDPFNEKVIRAGMGAHFRLPLRICESWEQLAQQLPPE-MILYRAEAEAQTPYDQVDWRRPAALVIGGEAAGPSDAARQRTHA-----IAIPMQGQVESLNAAVAGAVILFEAARQRRHG 260          
BLAST of jgi.p|Trimin1|348193 vs. uniprot
Match: A0A7S2B686_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2B686_9EUKA)

HSP 1 Score: 194 bits (494), Expect = 6.250e-58
Identity = 118/240 (49.17%), Postives = 148/240 (61.67%), Query Frame = 0
Query:   47 EGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQRLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGV------ESLNAAVAGAIVLGEAQRQRQ 280
            EG RLV DAL +GL P+ V++   ALAS  G  L   L +L +D V       V +  DT +PQGV+AV+A   LPLP    L LV DG+SDPGN+GT++R+AA  GVDAV++   C D W  K LR+ MGA FRVP    GTW +T +LL        AAD G   AH EV W + +AL+VGSEA GLS A R D     +   R+PL+ G+      ESLNAAVAG++VL EAQRQR+
Sbjct:    1 EGHRLVLDALASGLQPEFVVIHDAALASSIGERLGTALAQLETDRVVRTPAHIVEQLSDTQTPQGVIAVLAHEPLPLPPAPTLVLVCDGISDPGNLGTLLRSAAGSGVDAVLLLPGCSDPWGLKTLRSGMGAQFRVPLQHMGTWADTSDLLADWSCTALAADAGGELAHDEVDWRRGAALIVGSEAHGLSDAVRADPS---VQLCRVPLAEGLGASECLESLNAAVAGSVVLFEAQRQRR 237          
BLAST of jgi.p|Trimin1|348193 vs. uniprot
Match: A0A0P6YEI2_9CHLR (SpoU_sub_bind domain-containing protein n=2 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0P6YEI2_9CHLR)

HSP 1 Score: 192 bits (487), Expect = 9.850e-57
Identity = 116/269 (43.12%), Postives = 160/269 (59.48%), Query Frame = 0
Query:   21 ITSPTNPRIKT---LHKRKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVS-------PEALASPGGSALSALLQRLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQR 279
            ITS  NPR+K    LH+R+ R+ EG++L+EG RLV DA +AG++ + +  +       PEAL S        ++Q LS                DTV+PQG+VAV  RP L  P +  L L+ D V DPGN+GT++R AA  GV+ V++    VD+WSPK LRA MGA FR+P  A  TW E  + +   GL +Y AD   A  +++V W+ P+ L+VG E EG+ +AAR        T + IPL+  VESLNAA+AG ++L EA+RQR
Sbjct:    4 ITSLANPRVKAARALHRRRMREREGKILLEGARLVHDAFQAGVAFEALFYTSDQAAHIPEALRSCAWLVSEEVMQALS----------------DTVTPQGIVAVAERPQLAWPTSATLLLIADNVRDPGNLGTLLRAAAGAGVEGVLLPKGTVDVWSPKVLRAGMGAHFRLPVRAGLTWEEIAQAVN--GLTVYVADARGAVRYFDVDWTAPTVLIVGGETEGIGEAARALAH----TAVAIPLAREVESLNAAMAGTVILFEARRQR 250          
BLAST of jgi.p|Trimin1|348193 vs. uniprot
Match: A0A1X6PKW2_PORUM (SpoU_sub_bind domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKW2_PORUM)

HSP 1 Score: 194 bits (492), Expect = 3.210e-56
Identity = 126/268 (47.01%), Postives = 164/268 (61.19%), Query Frame = 0
Query:   17 DLLDITSPTNPRIKTLH---KRKSRDSEGRVLVEGCRLVTDALKAG--LSPDLVLVSPEALASPGGSALSALLQRLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQR 279
            D +++ S  NPRIK +    +R+ R+ EG +L+EG RLV DAL A    +P   +V+    A+    ALS     ++ D + +A+ D VA  CDTV+PQGVVAVV RP   +     L L LDGV+DPGN+GT++R+AAA G D VV+T  C D+WSPKALRA MGA  R+P +A     E     + RGL L  ADG A  A+  V W+ P+ LVVG EAEG S A     D  V     IP+   VESLNAA+AG++VL EA+RQR
Sbjct:   88 DAVEVVSTRNPRIKAVRHLLRRRMREREGLLLLEGHRLVVDALGAARPAAPVHTVVATRQAAARLWPALSTATG-VARDALLVATPDVVASVCDTVTPQGVVAVVGRPSTTVVPGSTLLLALDGVADPGNVGTLLRSAAAAGADGVVLTKGCADVWSPKALRAGMGAQLRLPVLAGLEPEEVVAWARGRGLRLRVADGSAVMAYDGVDWAAPTVLVVGGEAEGPSAALLAAADDVVA----IPMLGEVESLNAAIAGSVVLYEARRQR 350          
BLAST of jgi.p|Trimin1|348193 vs. uniprot
Match: R7QT73_CHOCR (SpoU_sub_bind domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT73_CHOCR)

HSP 1 Score: 190 bits (482), Expect = 1.950e-55
Identity = 120/266 (45.11%), Postives = 165/266 (62.03%), Query Frame = 0
Query:   19 LDITSPTNPRIK---TLHKRKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQ--RLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQR 279
            L++TS  NP +K   +L +R+ RD    +L+EG RL+ DAL A  +P  +  S + L     +A+ ALL   R S     L +   +   C+TVSPQGVVAV+ RP LPLP++  LALV D V DPGN+GT++R+AA  GVDAV+MT  C D W  K LRA MGA FR+P     +W E  +++   G  +  ADGG    + +V W  P+A+VVG EA G  + A ++  +G + GI  PL +G+ESLNAAVAG++VL E +RQR
Sbjct:   33 LELTSARNPHLKLARSLLRRRHRDKNNLILLEGQRLIEDALSASFAPHQLFYSDKLLRR--SAAMGALLADVRRSGCAPMLVAEPIMRSLCNTVSPQGVVAVLERPALPLPDSGTLALVCDEVRDPGNVGTLLRSAAGAGVDAVLMTHGCADPWGLKVLRAGMGAHFRLPVQVDQSWDEVMQVVHKWGCEVSVADGGGED-YAKVDWCGPAAIVVGGEANGPGERAFQEA-QGRVVGI--PLCSGMESLNAAVAGSVVLFEVRRQR 292          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348193 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4A7_9STRA5.110e-196100.00tRNA/rRNA methyltransferase n=1 Tax=Tribonema minu... [more]
A0A6H5L4S8_9PHAE6.810e-9956.79SpoU_sub_bind domain-containing protein n=2 Tax=Ec... [more]
A0A8J5X903_DIALT3.130e-6849.62SpoU_sub_bind domain-containing protein n=1 Tax=Di... [more]
A0A7S0LQQ5_9EUKA2.870e-6345.83Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
R1BHS4_EMIHU7.750e-6346.04RNA methyltransferase n=3 Tax=Emiliania huxleyi Ta... [more]
A0A540V9T9_9CHLR7.470e-6147.94RNA methyltransferase n=1 Tax=Litorilinea aerophil... [more]
A0A7S2B686_9EUKA6.250e-5849.17Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A0P6YEI2_9CHLR9.850e-5743.12SpoU_sub_bind domain-containing protein n=2 Tax=Ar... [more]
A0A1X6PKW2_PORUM3.210e-5647.01SpoU_sub_bind domain-containing protein n=1 Tax=Po... [more]
R7QT73_CHOCR1.950e-5545.11SpoU_sub_bind domain-containing protein n=1 Tax=Ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013123RNA 2-O ribose methyltransferase, substrate bindingSMARTSM00967SpoU_sub_bind_2coord: 45..122
e-value: 0.0012
score: 28.1
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 122..284
e-value: 1.2E-45
score: 157.1
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 19..119
e-value: 6.7E-21
score: 76.5
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 21..119
IPR001537tRNA/rRNA methyltransferase, SpoU typePFAMPF00588SpoU_methylasecoord: 129..272
e-value: 1.0E-33
score: 116.5
NoneNo IPR availablePIRSRPIRSR029256-1PIRSR029256-1coord: 137..280
e-value: 3.1E-12
score: 44.2
NoneNo IPR availablePANTHERPTHR43191:SF4RNA METHYLASE-RELATEDcoord: 20..280
NoneNo IPR availablePANTHERPTHR43191RRNA METHYLTRANSFERASE 3,coord: 20..280
NoneNo IPR availableCDDcd18095SpoU-like_rRNA-MTasecoord: 129..275
e-value: 5.07791E-62
score: 190.715
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 118..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_20contigContig_20:1181952..1183538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348193mRNA_4193Tribonema minus UTEX_B_3156 mRNAContig_20 1181901..1183538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348193|estExt_Genemark1.C_Ctg_200155 ID=Trimin1|348193|estExt_Genemark1.C_Ctg_200155|Name=jgi.p|Trimin1|348193|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=286bp
MRSTEAFELWRPPGSGDLLDITSPTNPRIKTLHKRKSRDSEGRVLVEGCR
LVTDALKAGLSPDLVLVSPEALASPGGSALSALLQRLSSDVVCLASGDCV
ARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAA
ALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQAR
GLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITG
IRIPLSNGVESLNAAVAGAIVLGEAQRQRQHGVNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013123SpoU_subst-bd
IPR029026tRNA_m1G_MTases_N
IPR029064L30e-like
IPR001537SpoU_MeTrfase
IPR029028Alpha/beta_knot_MTases