mRNA_698 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A835Z4M0_9STRA (Root UVB sensitive family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4M0_9STRA) HSP 1 Score: 432 bits (1111), Expect = 8.410e-153 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1 Query: 1 MAQLVQIRHHRDTRESTDTGFSPLKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSAPLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVAMALCAGHLIGTHLSVSKITV 684 MAQLVQIRHHRDTRESTDTGFSPLKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSAPLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVAMALCAGHLIGTHLSVSKITV Sbjct: 1 MAQLVQIRHHRDTRESTDTGFSPLKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSAPLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVAMALCAGHLIGTHLSVSKITV 228
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A835YUA2_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA2_9STRA) HSP 1 Score: 196 bits (497), Expect = 4.460e-58 Identity = 113/202 (55.94%), Postives = 138/202 (68.32%), Query Frame = 1 Query: 70 LKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLE-SFVAMA---LCAGHLIGTH 660 L +LP YP +V Y Y GWQF + + SAA V TQAL A G+ A PLAA+ WV+KDG+GQ GG++FSS+V TRFD NP+LW VSA LDAS LE+++P P F+ LASV+N KNVSFLAASASRA IH+ A +NLAD+T K GSQ I+SSM GMG GIAL +VVG E ++VA LC GHL T+ Sbjct: 1 LATILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTY 202
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A835YMG5_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG5_9STRA) HSP 1 Score: 198 bits (503), Expect = 6.660e-57 Identity = 110/207 (53.14%), Postives = 143/207 (69.08%), Query Frame = 1 Query: 79 LLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLE----SFVAMALCAGHLIGTHLSVSKITV 684 +LP YP SVRP YARY WQ + +C SAA V TQAL A G+ A PLAA+ WV+KDG+GQ GGI FS++V TRFD NP++W V+A LD S LE++AP+ P+ FL LA+++N KNVSFLAA+ASRA IH+ A +NLADVT K G+QNI+SSM GMG GIAL++ +G + + A AL GHL T+ S+ + + Sbjct: 85 ILPAGYPDSVRPGYARYVRWQLSSMVCTSAAGVLSTQALLHAVGLGAGAVPLAAALNWVVKDGLGQLGGIAFSALVNTRFDANPKMWRMVAAVSLDCSTALELLAPLFPAHFLPLAAIANAGKNVSFLAATASRAAIHNAFAARENLADVTGKAGAQNILSSMGGMGLGIALSAYLGADYATIAPAAAALMCGHLFSTYRSLGSVVL 291
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: D8LJS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS3_ECTSI) HSP 1 Score: 193 bits (490), Expect = 1.650e-55 Identity = 109/210 (51.90%), Postives = 143/210 (68.10%), Query Frame = 1 Query: 70 LKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLE--SFVAMALCAG--HLIGTHLSVSKITV 684 L L+LP +P SV P Y YAGWQF +AA V TQAL A G+ A PLAA+ WV+KDG+GQ GG+ FSS+V TRFD NP+LW V+A LDAS+VLE+++P+AP+ FL +ASV+N KNVSFLAASASRA IH+ L+L NLADVT K G+Q I++ M G G G+ L++ +G E + V LC HL H+S+ ++ + Sbjct: 2 LGLVLPSGFPASVHPPYMAYAGWQFTGMAASAAAGVMSTQALLYAMGLGAGALPLAATLNWVIKDGLGQLGGVAFSSLVSTRFDANPKLWRVVAAVSLDASMVLELLSPLAPAYFLPIASVANIGKNVSFLAASASRAAIHNVLSLKGNLADVTAKSGAQTILACMAGTGAGVTLSASLGSEFHAIVPACLCLSVVHLGANHMSMRRLGI 211
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A6H5L0I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I8_9PHAE) HSP 1 Score: 195 bits (495), Expect = 4.970e-55 Identity = 111/210 (52.86%), Postives = 145/210 (69.05%), Query Frame = 1 Query: 70 LKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLE--SFVAMALCAG--HLIGTHLSVSKITV 684 L L+LP +P SV P Y YAGWQF +AA V TQAL A G+ V A PLAA+ WV+KDG+GQ GG+ FSS+V TRFD NP+LW V+A LDAS+VLE+++P+AP+ FL +ASV+N KNVSFLAASASRA IH+ L+L NLADVT K G+Q I++ M G G G+AL++ +G E + V LC HL H+S+ ++ + Sbjct: 173 LGLVLPSGFPGSVHPPYMAYAGWQFTGMAASAAAGVMSTQALLYAMGVGVGALPLAATLNWVIKDGLGQLGGVAFSSLVSTRFDANPKLWRIVAAVSLDASMVLELLSPLAPAYFLPIASVANIGKNVSFLAASASRAAIHNVLSLKGNLADVTAKSGAQTILACMAGTGAGVALSASLGSEFHAIVPACLCLSVVHLGANHMSMRRLGI 382
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A5D6YB24_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB24_9STRA) HSP 1 Score: 172 bits (437), Expect = 6.970e-48 Identity = 98/208 (47.12%), Postives = 138/208 (66.35%), Query Frame = 1 Query: 76 LLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDV-SAPLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVAM----ALCAGHLIGTHLSVSKITV 684 L LP D SV +Y YA W FV SI +A+ V Q+L A G+ S P AA+ WVLKDG+GQFGG++F+S+V R+D +P+ W SA LDA+V+LE++ P+AP+ FL LAS++N KN+S+L+ASA+RA H+ AL +NLADVT K GSQ+I SS++G G GI L+ V G + + AL A HL+ + S+S +++ Sbjct: 72 LFLPKDAATSVSKDYFPYAKWYFVGSIASAASGVLSMQSLLYAIGLGAGSIPTAAAVNWVLKDGLGQFGGVLFASLVNNRYDADPKRWRTASAVALDAAVLLEILTPLAPAHFLPLASLANVAKNISWLSASATRAGFHNSFALRENLADVTAKAGSQSIASSILGTGLGIGLSHVTGASTAHVLCAFGALSAVHLVSIYRSLSCVSL 279
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A5A8CKM9_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CKM9_CAFRO) HSP 1 Score: 172 bits (437), Expect = 2.840e-47 Identity = 99/210 (47.14%), Postives = 138/210 (65.71%), Query Frame = 1 Query: 70 LKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLES---FVAMALCAG-HLIGTHLSVSKITV 684 L+ +LP YPVSV P YA+YA W V S +AA V QAL A G A P+AA+ WV+KDG+GQ GG++F S V TRFD++ + W FVSA L+A+ +LE++ P P FL LA+++N KN+SFL+ASA+RA IH LA NLADVT + GSQ+I +S+ G GIAL+ +VG + A A AG HL+ H +++++++ Sbjct: 84 LRHVLPQGYPVSVAPSYAQYAAWSAVGSTASAAAGVLSMQALLHAVGAGAGAVPMAAALQWVVKDGLGQLGGVLFVSFVNTRFDSDAKRWRFVSATALEAATLLEVLTPAMPGLFLPLAALANVGKNISFLSASATRAGIHQALATSGNLADVTARAGSQSIAASLAGTSLGIALSPLVGTATPSVMAAWACLAGVHLLSLHRALARLSL 293
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: W7TSK4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSK4_9STRA) HSP 1 Score: 172 bits (435), Expect = 6.590e-47 Identity = 103/209 (49.28%), Postives = 140/209 (66.99%), Query Frame = 1 Query: 70 LKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVAMA-LCAG----HLIGTHLSVSKI 678 L+ LLP YP SV+ Y Y Q AS+ SA V TQ+L A G+ A PLAA+ W++KDGIGQ GGI+F+SVV RFD NP+ W V+ LD S LE++AP+AP+ FL +AS++N KNV FL+ASASRA IH+ A +NLAD+T K GSQ IV+S++G G GIAL++ +G S++A+A +CAG H+ +LS+ + Sbjct: 112 LRALLPRGYPRSVQKGYVEYVKLQMTASLASSAVGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIVFASVVNDRFDANPKRWKMVATISLDLSCGLELLAPLAPAYFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALG-SSWMALAPICAGLSFIHISCNYLSLRHV 319
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: K3XB12_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XB12_GLOUD) HSP 1 Score: 167 bits (424), Expect = 8.510e-46 Identity = 93/208 (44.71%), Postives = 133/208 (63.94%), Query Frame = 1 Query: 76 LLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDV-SAPLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVAMA----LCAGHLIGTHLSVSKITV 684 L LP D SV +Y Y W FV SI +A V Q+L A G+ S P AA+ WVLKDG+GQFGG+MF+SVV R+D +P+ W SA LDA+V++E++ P+ P+ FL +AS++N KN+S+L+ASA+RA H+ A+ +NLADVT K GSQ+I SS++G G GI L+ + G + + L A HL + S++ +T+ Sbjct: 92 LFLPKDAKTSVTKDYFPYVQWYFVGSIASAATGVLSMQSLLYAIGLGAGSIPTAAAVNWVLKDGLGQFGGVMFASVVNNRYDADPKRWRTASAVALDAAVLMEILTPLCPAYFLPIASLANVAKNISWLSASATRAGFHNSFAMKENLADVTAKAGSQSIASSILGTGLGIGLSQITGASTLNVLGAFGVLSAFHLFSIYKSLACVTL 299
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A7S3PE23_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PE23_9STRA) HSP 1 Score: 166 bits (421), Expect = 6.290e-45 Identity = 92/214 (42.99%), Postives = 133/214 (62.15%), Query Frame = 1 Query: 58 GFSPLKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVA----MALCAGHLIGTHLSVSKITV 684 G LK LLP Y SV Y YA W +AS+ G+ + V QAL A G+ A P+AA+ W++KDG+GQFGG++ +S + RFD PR W F++A +LDASV++E++ P+ P FL +ASV+N KN+ +++ASASRA IH +NLAD+T K GSQ I SS++G G+ ++ +VG + V + LC HL+ SVS + + Sbjct: 126 GHELLKHLLPKHYETSVGKTYVEYAKWSMLASVFGTVSGVLSMQALLFAIGLGAGAIPMAAAMNWIVKDGLGQFGGMLCASFINQRFDAEPRRWRFLAACILDASVLIEVVTPVFPQFFLPIASVANIGKNIGWISASASRAGIHRSFMREENLADLTGKAGSQTIFSSVVGTALGVIISPIVGSSTAVVFPIVLILCGAHLVCVFQSVSAVNI 339 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_698 ID=mRNA_698|Name=jgi.p|Trimin1|156958|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=687bp|location=Sequence derived from alignment at Contig_2:1159329..1160015- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCACAGCTTGTACAAATCAGGCACCACAGAGACACCAGGGAGTCGACback to top protein sequence of jgi.p|Trimin1|156958 >Trimin1|156958|e_gw1.2.346.1 ID=Trimin1|156958|e_gw1.2.346.1|Name=jgi.p|Trimin1|156958|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=229bp MAQLVQIRHHRDTRESTDTGFSPLKLLLPVDYPVSVRPEYARYAGWQFVAback to top mRNA from alignment at Contig_2:1159329..1160015- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_698 ID=mRNA_698|Name=jgi.p|Trimin1|156958|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=687bp|location=Sequence derived from alignment at Contig_2:1159329..1160015- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_2:1159329..1160015- >mRNA_698 ID=mRNA_698|Name=jgi.p|Trimin1|156958|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=687bp|location=Sequence derived from alignment at Contig_2:1159329..1160015- (Tribonema minus UTEX_B_3156 )back to top |