Trimin1|156958|e_gw1.2.346.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|156958
Unique NameTrimin1|156958|e_gw1.2.346.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length229
Homology
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A835Z4M0_9STRA (Root UVB sensitive family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4M0_9STRA)

HSP 1 Score: 432 bits (1111), Expect = 8.410e-153
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
Query:    1 MAQLVQIRHHRDTRESTDTGFSPLKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSAPLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVAMALCAGHLIGTHLSVSKITV 228
            MAQLVQIRHHRDTRESTDTGFSPLKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSAPLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVAMALCAGHLIGTHLSVSKITV
Sbjct:    1 MAQLVQIRHHRDTRESTDTGFSPLKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSAPLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVAMALCAGHLIGTHLSVSKITV 228          
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A835YUA2_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA2_9STRA)

HSP 1 Score: 196 bits (497), Expect = 4.460e-58
Identity = 113/202 (55.94%), Postives = 138/202 (68.32%), Query Frame = 0
Query:   24 LKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLE-SFVAMA---LCAGHLIGTH 220
            L  +LP  YP +V   Y  Y GWQF + +  SAA V  TQAL  A G+   A PLAA+  WV+KDG+GQ GG++FSS+V TRFD NP+LW  VSA  LDAS  LE+++P  P  F+ LASV+N  KNVSFLAASASRA IH+  A  +NLAD+T K GSQ I+SSM GMG GIAL +VVG E ++VA     LC GHL  T+
Sbjct:    1 LATILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTY 202          
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A835YMG5_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG5_9STRA)

HSP 1 Score: 198 bits (503), Expect = 6.660e-57
Identity = 110/207 (53.14%), Postives = 143/207 (69.08%), Query Frame = 0
Query:   27 LLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLE----SFVAMALCAGHLIGTHLSVSKITV 228
            +LP  YP SVRP YARY  WQ  + +C SAA V  TQAL  A G+   A PLAA+  WV+KDG+GQ GGI FS++V TRFD NP++W  V+A  LD S  LE++AP+ P+ FL LA+++N  KNVSFLAA+ASRA IH+  A  +NLADVT K G+QNI+SSM GMG GIAL++ +G +    +  A AL  GHL  T+ S+  + +
Sbjct:   85 ILPAGYPDSVRPGYARYVRWQLSSMVCTSAAGVLSTQALLHAVGLGAGAVPLAAALNWVVKDGLGQLGGIAFSALVNTRFDANPKMWRMVAAVSLDCSTALELLAPLFPAHFLPLAAIANAGKNVSFLAATASRAAIHNAFAARENLADVTGKAGAQNILSSMGGMGLGIALSAYLGADYATIAPAAAALMCGHLFSTYRSLGSVVL 291          
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: D8LJS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS3_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 1.650e-55
Identity = 109/210 (51.90%), Postives = 143/210 (68.10%), Query Frame = 0
Query:   24 LKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLE--SFVAMALCAG--HLIGTHLSVSKITV 228
            L L+LP  +P SV P Y  YAGWQF      +AA V  TQAL  A G+   A PLAA+  WV+KDG+GQ GG+ FSS+V TRFD NP+LW  V+A  LDAS+VLE+++P+AP+ FL +ASV+N  KNVSFLAASASRA IH+ L+L  NLADVT K G+Q I++ M G G G+ L++ +G E  + V   LC    HL   H+S+ ++ +
Sbjct:    2 LGLVLPSGFPASVHPPYMAYAGWQFTGMAASAAAGVMSTQALLYAMGLGAGALPLAATLNWVIKDGLGQLGGVAFSSLVSTRFDANPKLWRVVAAVSLDASMVLELLSPLAPAYFLPIASVANIGKNVSFLAASASRAAIHNVLSLKGNLADVTAKSGAQTILACMAGTGAGVTLSASLGSEFHAIVPACLCLSVVHLGANHMSMRRLGI 211          
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A6H5L0I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I8_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 4.970e-55
Identity = 111/210 (52.86%), Postives = 145/210 (69.05%), Query Frame = 0
Query:   24 LKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLE--SFVAMALCAG--HLIGTHLSVSKITV 228
            L L+LP  +P SV P Y  YAGWQF      +AA V  TQAL  A G+ V A PLAA+  WV+KDG+GQ GG+ FSS+V TRFD NP+LW  V+A  LDAS+VLE+++P+AP+ FL +ASV+N  KNVSFLAASASRA IH+ L+L  NLADVT K G+Q I++ M G G G+AL++ +G E  + V   LC    HL   H+S+ ++ +
Sbjct:  173 LGLVLPSGFPGSVHPPYMAYAGWQFTGMAASAAAGVMSTQALLYAMGVGVGALPLAATLNWVIKDGLGQLGGVAFSSLVSTRFDANPKLWRIVAAVSLDASMVLELLSPLAPAYFLPIASVANIGKNVSFLAASASRAAIHNVLSLKGNLADVTAKSGAQTILACMAGTGAGVALSASLGSEFHAIVPACLCLSVVHLGANHMSMRRLGI 382          
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A5D6YB24_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB24_9STRA)

HSP 1 Score: 172 bits (437), Expect = 6.970e-48
Identity = 98/208 (47.12%), Postives = 138/208 (66.35%), Query Frame = 0
Query:   26 LLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDV-SAPLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVAM----ALCAGHLIGTHLSVSKITV 228
            L LP D   SV  +Y  YA W FV SI  +A+ V   Q+L  A G+   S P AA+  WVLKDG+GQFGG++F+S+V  R+D +P+ W   SA  LDA+V+LE++ P+AP+ FL LAS++N  KN+S+L+ASA+RA  H+  AL +NLADVT K GSQ+I SS++G G GI L+ V G  +   +    AL A HL+  + S+S +++
Sbjct:   72 LFLPKDAATSVSKDYFPYAKWYFVGSIASAASGVLSMQSLLYAIGLGAGSIPTAAAVNWVLKDGLGQFGGVLFASLVNNRYDADPKRWRTASAVALDAAVLLEILTPLAPAHFLPLASLANVAKNISWLSASATRAGFHNSFALRENLADVTAKAGSQSIASSILGTGLGIGLSHVTGASTAHVLCAFGALSAVHLVSIYRSLSCVSL 279          
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A5A8CKM9_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CKM9_CAFRO)

HSP 1 Score: 172 bits (437), Expect = 2.840e-47
Identity = 99/210 (47.14%), Postives = 138/210 (65.71%), Query Frame = 0
Query:   24 LKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLES---FVAMALCAG-HLIGTHLSVSKITV 228
            L+ +LP  YPVSV P YA+YA W  V S   +AA V   QAL  A G    A P+AA+  WV+KDG+GQ GG++F S V TRFD++ + W FVSA  L+A+ +LE++ P  P  FL LA+++N  KN+SFL+ASA+RA IH  LA   NLADVT + GSQ+I +S+ G   GIAL+ +VG  +     A A  AG HL+  H +++++++
Sbjct:   84 LRHVLPQGYPVSVAPSYAQYAAWSAVGSTASAAAGVLSMQALLHAVGAGAGAVPMAAALQWVVKDGLGQLGGVLFVSFVNTRFDSDAKRWRFVSATALEAATLLEVLTPAMPGLFLPLAALANVGKNISFLSASATRAGIHQALATSGNLADVTARAGSQSIAASLAGTSLGIALSPLVGTATPSVMAAWACLAGVHLLSLHRALARLSL 293          
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: W7TSK4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSK4_9STRA)

HSP 1 Score: 172 bits (435), Expect = 6.590e-47
Identity = 103/209 (49.28%), Postives = 140/209 (66.99%), Query Frame = 0
Query:   24 LKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVAMA-LCAG----HLIGTHLSVSKI 226
            L+ LLP  YP SV+  Y  Y   Q  AS+  SA  V  TQ+L  A G+   A PLAA+  W++KDGIGQ GGI+F+SVV  RFD NP+ W  V+   LD S  LE++AP+AP+ FL +AS++N  KNV FL+ASASRA IH+  A  +NLAD+T K GSQ IV+S++G G GIAL++ +G  S++A+A +CAG    H+   +LS+  +
Sbjct:  112 LRALLPRGYPRSVQKGYVEYVKLQMTASLASSAVGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIVFASVVNDRFDANPKRWKMVATISLDLSCGLELLAPLAPAYFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALG-SSWMALAPICAGLSFIHISCNYLSLRHV 319          
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: K3XB12_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XB12_GLOUD)

HSP 1 Score: 167 bits (424), Expect = 8.510e-46
Identity = 93/208 (44.71%), Postives = 133/208 (63.94%), Query Frame = 0
Query:   26 LLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDV-SAPLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVAMA----LCAGHLIGTHLSVSKITV 228
            L LP D   SV  +Y  Y  W FV SI  +A  V   Q+L  A G+   S P AA+  WVLKDG+GQFGG+MF+SVV  R+D +P+ W   SA  LDA+V++E++ P+ P+ FL +AS++N  KN+S+L+ASA+RA  H+  A+ +NLADVT K GSQ+I SS++G G GI L+ + G  +   +     L A HL   + S++ +T+
Sbjct:   92 LFLPKDAKTSVTKDYFPYVQWYFVGSIASAATGVLSMQSLLYAIGLGAGSIPTAAAVNWVLKDGLGQFGGVMFASVVNNRYDADPKRWRTASAVALDAAVLMEILTPLCPAYFLPIASLANVAKNISWLSASATRAGFHNSFAMKENLADVTAKAGSQSIASSILGTGLGIGLSQITGASTLNVLGAFGVLSAFHLFSIYKSLACVTL 299          
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Match: A0A7S3PE23_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PE23_9STRA)

HSP 1 Score: 166 bits (421), Expect = 6.290e-45
Identity = 92/214 (42.99%), Postives = 133/214 (62.15%), Query Frame = 0
Query:   20 GFSPLKLLLPVDYPVSVRPEYARYAGWQFVASICGSAASVFGTQALFCAAGMDVSA-PLAASTAWVLKDGIGQFGGIMFSSVVGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNVSFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSVVGLESFVA----MALCAGHLIGTHLSVSKITV 228
            G   LK LLP  Y  SV   Y  YA W  +AS+ G+ + V   QAL  A G+   A P+AA+  W++KDG+GQFGG++ +S +  RFD  PR W F++A +LDASV++E++ P+ P  FL +ASV+N  KN+ +++ASASRA IH      +NLAD+T K GSQ I SS++G   G+ ++ +VG  + V     + LC  HL+    SVS + +
Sbjct:  126 GHELLKHLLPKHYETSVGKTYVEYAKWSMLASVFGTVSGVLSMQALLFAIGLGAGAIPMAAAMNWIVKDGLGQFGGMLCASFINQRFDAEPRRWRFLAACILDASVLIEVVTPVFPQFFLPIASVANIGKNIGWISASASRAGIHRSFMREENLADLTGKAGSQTIFSSVVGTALGVIISPIVGSSTAVVFPIVLILCGAHLVCVFQSVSAVNI 339          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|156958 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4M0_9STRA8.410e-153100.00Root UVB sensitive family n=1 Tax=Tribonema minus ... [more]
A0A835YUA2_9STRA4.460e-5855.94Vitamin B6 photo-protection and homoeostasis-domai... [more]
A0A835YMG5_9STRA6.660e-5753.14Vitamin B6 photo-protection and homoeostasis-domai... [more]
D8LJS3_ECTSI1.650e-5551.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0I8_9PHAE4.970e-5552.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5D6YB24_9STRA6.970e-4847.12Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A5A8CKM9_CAFRO2.840e-4747.14Uncharacterized protein n=5 Tax=Cafeteria roenberg... [more]
W7TSK4_9STRA6.590e-4749.28Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
K3XB12_GLOUD8.510e-4644.71Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S3PE23_9STRA6.290e-4542.99Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006968Root UVB sensitive familyPFAMPF04884UVB_sens_protcoord: 24..226
e-value: 6.6E-51
score: 173.2
IPR006968Root UVB sensitive familyPANTHERPTHR12770RUS1 FAMILY PROTEIN C16ORF58coord: 24..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_2contigContig_2:1159329..1160015 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|156958mRNA_698Tribonema minus UTEX_B_3156 mRNAContig_2 1159329..1160015 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|156958|e_gw1.2.346.1 ID=Trimin1|156958|e_gw1.2.346.1|Name=jgi.p|Trimin1|156958|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=229bp
MAQLVQIRHHRDTRESTDTGFSPLKLLLPVDYPVSVRPEYARYAGWQFVA
SICGSAASVFGTQALFCAAGMDVSAPLAASTAWVLKDGIGQFGGIMFSSV
VGTRFDTNPRLWIFVSAAVLDASVVLEMIAPMAPSAFLMLASVSNGLKNV
SFLAASASRATIHSHLALGKNLADVTVKKGSQNIVSSMIGMGTGIALTSV
VGLESFVAMALCAGHLIGTHLSVSKITV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006968RUS_fam