Trimin1|37682|CE37681_556 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|37682
Unique Name	Trimin1\|37682\|CE37681_556
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	335

Homology

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BLAST of jgi.p|Trimin1|37682 vs. uniprot
Match: A0A836CH22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH22_9STRA)

HSP 1 Score: 433 bits (1114), Expect = 8.480e-150
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0

Query:    1 MMAVRASALACLLLCLPSIIDGRPQPSGWRRSNRRPGGRVVAMFGLGDNTFVKWAREAQEQERAAQXXXXXXXXXXXXXEGSQPSMSEREAQYRAFLEATGERLPDYEHDEEAAPSEAVTEGSSSSSAQGPMTVLLSVAKTTLVAGLGYVVALKGAALVKAELAKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDEAASEAAEVADLADXXXXXXXXXXXXXXXXXXXXXXXXSAAAVEAEQLVEDNGDIQAQLEQIEAERDAERAFAAEQEALQYLEQEEADEEAAAAPFEGDNEDDXXXXXXGDVRAGGVGVRRKEPVDLSMV 334
            MMAVRASALACLLLCLPSIIDGRPQPSGWRRSNRRPGGRVVAMFGLGDNTFVKWAREAQEQERAAQXXXXXXXXXXXXXEGSQPSMSEREAQYRAFLEATGERLPDYEHDEEAAPSEAVTEGSSSSSAQGPMTVLLSVAKTTLVAGLGYVVALKGAALVKAELAKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDEAASEAAEVADLADXXXXXXXXXXXXXXXXXXXXXXXXSAAAVEAEQLVEDNGDIQAQLEQIEAERDAERAFAAEQEALQYLEQEEADEEAAAAPFEGDNEDDXXXXXXGDVRAGGVGVRRKEPVDLSMV
Sbjct:    1 MMAVRASALACLLLCLPSIIDGRPQPSGWRRSNRRPGGRVVAMFGLGDNTFVKWAREAQEQERAAQXXXXXXXXXXXXXEGSQPSMSEREAQYRAFLEATGERLPDYEHDEEAAPSEAVTEGSSSSSAQGPMTVLLSVAKTTLVAGLGYVVALKGAALVKAELAKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDEAASEAAEVADLADXXXXXXXXXXXXXXXXXXXXXXXXSAAAVEAEQLVEDNGDIQAQLEQIEAERDAERAFAAEQEALQYLEQEEADEEAAAAPFEGDNEDDXXXXXXGDVRAGGVGVRRKEPVDLSMV 334

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|37682 vs. uniprot

BLAST of jgi.p|Trimin1|37682 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CH22_9STRA	8.480e-150	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 249..289
None	No IPR available	COILS	Coil	Coil	coord: 206..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..126

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_2	contig	Contig_2:629571..635243 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|37682	mRNA_595	Tribonema minus UTEX_B_3156	mRNA	Contig_2 629401..635300 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|37682|CE37681_556 ID=Trimin1|37682|CE37681_556|Name=jgi.p|Trimin1|37682|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=335bp
MMAVRASALACLLLCLPSIIDGRPQPSGWRRSNRRPGGRVVAMFGLGDNT
FVKWAREAQEQERAAQQGSSGGSSSASSSEGSQPSMSEREAQYRAFLEAT
GERLPDYEHDEEAAPSEAVTEGSSSSSAQGPMTVLLSVAKTTLVAGLGYV
VALKGAALVKAELAKRRAAAAGDGGAADGGSSSSSDSAARVRAAAQAVMQ
HHPDEAASEAAEVADLADDAAEEEAEAFTDAQEAEGDELEDLSAAAVEAE
QLVEDNGDIQAQLEQIEAERDAERAFAAEQEALQYLEQEEADEEAAAAPF
EGDNEDDDNDDEDGDVRAGGVGVRRKEPVDLSMV*