Trimin1|351864|estExt_Genemark1.C_Ctg_1010041 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351864
Unique NameTrimin1|351864|estExt_Genemark1.C_Ctg_1010041
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length282
Homology
BLAST of jgi.p|Trimin1|351864 vs. uniprot
Match: A0A835ZI19_9STRA (Alkyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI19_9STRA)

HSP 1 Score: 548 bits (1412), Expect = 6.490e-197
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
Query:    1 MVQQLPERSATSQESTWSPHHHQHHDAKGGLRRVPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETSVADAQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFGGVAANSPSQSQQ 281
            MVQQLPERSATSQESTWSPHHHQHHDAKGGLRRVPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETSVADAQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFGGVAANSPSQSQQ
Sbjct:    1 MVQQLPERSATSQESTWSPHHHQHHDAKGGLRRVPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETSVADAQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFGGVAANSPSQSQQ 281          
BLAST of jgi.p|Trimin1|351864 vs. uniprot
Match: W7TFP8_9STRA (Alkyl transferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFP8_9STRA)

HSP 1 Score: 246 bits (628), Expect = 9.110e-77
Identity = 126/239 (52.72%), Postives = 168/239 (70.29%), Query Frame = 0
Query:   34 VPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETSVADAQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPD-PDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFGGV 271
            VPKHVAF+LDGNGRWA ++GLPR AGH EGAKRALEV++ C+ LG++ VTL+  STENW RPAAE++ ++A +E  +  N +    N IRLV+IGQ  RL   LQ LV + +RET++       + MTVCLA+SYGGRD+I +A++ +A   A G +   D+ E + +  LST   GV   PDL+IRTSGE R SNF+L++ AYSE YV+   WPDF+  DL+ A + +G R+RRFGGV
Sbjct:   98 VPKHVAFILDGNGRWAEKQGLPRGAGHREGAKRALEVLQSCQALGIRTVTLYCLSTENWSRPAAEISVILACVETTLRTNLQYAHDNRIRLVVIGQSHRLPPNLQALVSQAERETALYT-----EGMTVCLALSYGGRDDIVQASRTLAEQAAMGEIQPQDIDEALFESCLSTGVKGVDGAPDLVIRTSGEQRWSNFMLFECAYSEFYVADVLWPDFQEPDLLAALESYGMRRRRFGGV 331          
BLAST of jgi.p|Trimin1|351864 vs. uniprot
Match: D8LSM4_ECTSI (Alkyl transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM4_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 2.470e-76
Identity = 133/298 (44.63%), Postives = 172/298 (57.72%), Query Frame = 0
Query:   30 GLRRVPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETSVAD----------------------------------------------------------AQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFG 269
            GLR VP+HVAFV+DGNGRWA  R LPR  GH EGA+RA E +E CR LGV++VTL+ FSTENW+RP  EV+ +M L+E  +   R ++R+NGIRL  IG+ +RL   L+ L+ E+Q ++                                                              A      MT+CLA+SYGGR E+  AA+ +A   A GRL   D+ E  L   LST + G+PDPDL++RTSGE R+SN L+WQ+AYSEL V  KAWPDF+  DLVEAF+D+G R+RRFG
Sbjct:   67 GLRVVPRHVAFVMDGNGRWAANRNLPRRIGHAEGARRAGEAVEACRRLGVEFVTLYAFSTENWRRPTGEVSFIMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAPPLPQPVAAPPTPTMTLCLAISYGGRSELVAAARELAAEAAAGRLDPADIDEPALARRLSTARLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFRDYGRRRRRFG 364          
BLAST of jgi.p|Trimin1|351864 vs. uniprot
Match: A0A6H5KLI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI8_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 8.200e-76
Identity = 138/302 (45.70%), Postives = 181/302 (59.93%), Query Frame = 0
Query:   30 GLRRVPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETS--------------------------------------------------------------VADAQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFG 269
            GLR VP+HVAFV+DGNGRWA  R LPR  GH EGA+RA E +E CR LGV++VTL+ FSTENW+RPA EV+ LM L+E  +   R ++R+NGIRL +IG+ +RL   L+ L+ E+Q +++                                                              VA A  +   MT+CLA+SYGGR E+A AA+ +A+  A GRL   D+ E  L   LST++ G+PDPDL++RTSGE R+SN L+WQ+AYSEL V  KAWPDF+  DLVEAF+D+G R+RRFG
Sbjct:  314 GLRVVPRHVAFVMDGNGRWAVSRNLPRRTGHAEGARRAGEAVEACRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTVIGELDRLPARLRSLLLEIQEDSNXXXXXXXXXXXXXXXXXXXXGVPPSVAIPVAXXXXXXXXXXXXXXXXXXXXXXIAPPLPKQPVAAAPPTAT-MTLCLAISYGGRSELAAAARELAVEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFRDYGRRRRRFG 614          
BLAST of jgi.p|Trimin1|351864 vs. uniprot
Match: A0A7V5R8L6_9DELT (Isoprenyl transferase n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A7V5R8L6_9DELT)

HSP 1 Score: 239 bits (610), Expect = 1.920e-75
Identity = 123/243 (50.62%), Postives = 163/243 (67.08%), Query Frame = 0
Query:   31 LRRVPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETSVADAQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFGGVAA 273
            +R +P H+A ++DGNGRWA  R  PR AGH  G      V+E+ RE+GV+Y+TL+ FSTENW+RP AEV  LMALL   +E+  R M +N IRL  IGQ+ERL   +  ++E+V +ET          +MT+ LA+SYGGRDE+ RA + +A   A G++  D ++EE+L  YL T  AG PDPDL+IRT GEHR+SNFLLWQ +Y+ELY +   WPDF+   L+EA   +G RQRRFG   A
Sbjct:    9 IRLIPSHIAIIMDGNGRWAEERNRPRLAGHKAGVDSVRAVVEIAREIGVRYLTLYAFSTENWQRPGAEVKGLMALLRTYLESELRTMLKNDIRLFCIGQRERLPADVLSVLEQVMQETDHCR------EMTLNLALSYGGRDEMMRAIRKMAHKCATGQIDPDALSEELLGQYLDT--AGQPDPDLLIRTGGEHRLSNFLLWQVSYAELYFTETKWPDFRKQQLLEAVATYGRRQRRFGKTGA 243          
BLAST of jgi.p|Trimin1|351864 vs. uniprot
Match: A0A6J4FLM4_9PROT (Isoprenyl transferase n=2 Tax=Magnetospirillum TaxID=13134 RepID=A0A6J4FLM4_9PROT)

HSP 1 Score: 237 bits (604), Expect = 1.370e-74
Identity = 126/238 (52.94%), Postives = 154/238 (64.71%), Query Frame = 0
Query:   34 VPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETSVADAQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFGGV 271
             P HVA ++DGNGRWA  RGLPRTAGH +GA+     +E  RELGV Y+TL+ FS+ENWKRPA EV  LM LL   +     ++ +NGIRL +IG + RLS  +  L+EE + +T      Q    +T+ LA+SYGGR EI  AA+AVA  VAEGR+  D + E  L   LST  A +PDPDL+IRTSGE RISNFLLWQ AYSEL      WPDF  AD   A +D+  R RRFG  
Sbjct:   13 APVHVAIIMDGNGRWAKARGLPRTAGHKKGAESVRRAVETARELGVSYLTLYAFSSENWKRPAGEVTDLMGLLRLYLRNEVNSLHKNGIRLRIIGDRSRLSADIVSLIEESEAKT------QDNKALTLVLALSYGGRQEIVEAARAVARQVAEGRIPVDAIDEATLASNLST--ADIPDPDLVIRTSGEQRISNFLLWQCAYSELVFLDVLWPDFSRADFEAAIRDYHGRDRRFGAA 242          
BLAST of jgi.p|Trimin1|351864 vs. uniprot
Match: A0A0P1I837_9RHOB (Isoprenyl transferase n=8 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A0P1I837_9RHOB)

HSP 1 Score: 235 bits (600), Expect = 5.330e-74
Identity = 125/237 (52.74%), Postives = 161/237 (67.93%), Query Frame = 0
Query:   35 PKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETSVADAQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFGGV 271
            P+HVA ++DGNGRWA  RG PR  GH  GAKR  EV+E C  LGV+Y+T+F FSTENWKR  AEVA LM+L    I    R +++NGIR+  IG + RL + L  L++ ++ ET      +  D + + +A++YGGRDE+ARA K +A  VAEGRL  +DV EE L  YL T    +PDPDL+IRTSGE RISNFLLWQ+AYSE       WPDF AA++    ++FG+R+RRFG V
Sbjct:   13 PRHVAIIMDGNGRWAQARGRPRLFGHQAGAKRVREVVEACPGLGVKYLTVFAFSTENWKRTQAEVAGLMSLFRRYIIKETRTLKENGIRVRFIGDRVRLDSKLISLMDALEEET------KENDLVHLTVALNYGGRDEVARATKRLARDVAEGRLRPEDVDEETLPKYLDTHV--LPDPDLVIRTSGEARISNFLLWQSAYSEYEFIDTLWPDFTAAEMERLCRNFGSRERRFGAV 241          
BLAST of jgi.p|Trimin1|351864 vs. uniprot
Match: A0A4P5VVJ8_9DELT (Isoprenyl transferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A4P5VVJ8_9DELT)

HSP 1 Score: 234 bits (596), Expect = 1.950e-73
Identity = 120/239 (50.21%), Postives = 156/239 (65.27%), Query Frame = 0
Query:   33 RVPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETSVADAQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFGGV 271
            +VP HVA ++DGNGRWA  RG PR  GH EGA+   ++ + CRELG + +TL++FSTENWKRP  EV +LM LL   +   RR +  NGIRL  +GQ +RL   ++  ++E+        A +   QM + LA+SYG R EI  AAKA+A   A GRL  D + E      L T  AG+PDPDL+IRTSGE RISNF+LWQ AY+E+YV+   WPDF+   L+EAF+ FG R+RRFG  
Sbjct:    2 KVPTHVAIIMDGNGRWAESRGWPRVRGHEEGAESVRDITQACRELGCKALTLYSFSTENWKRPEDEVGALMGLLARYLTQERREILDNGIRLNAVGQLDRLPLAVRAALKELMH------ASRDNKQMVLTLALSYGSRQEIVEAAKALAKKAASGRLRPDQIDEAAFAAELQT--AGLPDPDLLIRTSGELRISNFMLWQLAYAEIYVTETLWPDFRKPQLIEAFEAFGRRERRFGAT 232          
BLAST of jgi.p|Trimin1|351864 vs. uniprot
Match: A0A5P9GE94_9RHOB (Isoprenyl transferase n=10 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A5P9GE94_9RHOB)

HSP 1 Score: 233 bits (594), Expect = 4.310e-73
Identity = 126/248 (50.81%), Postives = 161/248 (64.92%), Query Frame = 0
Query:   26 DAKGGLRRVPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETSVADAQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFGGVAA 273
            D +  L   P+HVA ++DGNGRWA  RG PR  GH  GA+R  EV+E C  LG++Y+T+F FSTENWKR   EVA LM L    I    R +  NGIR+  IG + RL + L  L++ ++ ET      ++ D + + +A++YGGRDE+ARA K +A  VAEGRL  ++V EE L  YL T    +PDPDL+IRTSGE RISNFLLWQ+AYSE       WPDF AA+L    Q++GTR RRFG V A
Sbjct:    4 DPQTELESGPRHVAIIMDGNGRWAQARGRPRLFGHHAGARRVREVVEACPGLGIKYLTVFAFSTENWKRTQVEVAGLMNLFRRYIIKETRTLADNGIRVRFIGDRVRLDSKLIELMDSLEEET------KNNDLVHLTVALNYGGRDEVARATKRLARDVAEGRLKPEEVDEETLPKYLDTRV--LPDPDLVIRTSGEARISNFLLWQSAYSEYEFIDTLWPDFTAAELARLCQNYGTRDRRFGAVVA 243          
BLAST of jgi.p|Trimin1|351864 vs. uniprot
Match: UPI0010F95770 (polyprenyl diphosphate synthase n=1 Tax=Marimonas lutisalis TaxID=2545756 RepID=UPI0010F95770)

HSP 1 Score: 233 bits (594), Expect = 4.590e-73
Identity = 125/248 (50.40%), Postives = 161/248 (64.92%), Query Frame = 0
Query:   26 DAKGGLRRVPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETSVADAQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQDFGTRQRRFGGVAA 273
            D  GG  R P+HVA ++DGNGRWA  RG PR  GH  GAKR  E++E C +LGV+Y+T+F FSTENWKR   EVA LM+L    I    RA++  G+R+  IG + RL   LQ L++E++  T+        D++ + +A++YGGRDE+ARA K +A  VA GRL  + V EE L  YL T    +PDPDL+IRTSGE RISNFLLWQ+AY+E       WPDF A    +    +GTR+RRFGGV A
Sbjct:    8 DRAGG--RGPRHVAIIMDGNGRWAQARGRPRLFGHHAGAKRVREIVEACPDLGVKYLTIFAFSTENWKRTQVEVAGLMSLFRRYITKEARALKAEGVRVRFIGDRVRLDKKLQALMDELEELTA------GNDRVHLTIALNYGGRDEVARATKRLAQDVAAGRLDPETVDEETLPKYLDTCV--LPDPDLVIRTSGEARISNFLLWQSAYAEYEFIDTLWPDFSAQIFADLVLAYGTRERRFGGVKA 245          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351864 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZI19_9STRA6.490e-197100.00Alkyl transferase n=1 Tax=Tribonema minus TaxID=30... [more]
W7TFP8_9STRA9.110e-7752.72Alkyl transferase n=1 Tax=Nannochloropsis gaditana... [more]
D8LSM4_ECTSI2.470e-7644.63Alkyl transferase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KLI8_9PHAE8.200e-7645.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7V5R8L6_9DELT1.920e-7550.62Isoprenyl transferase n=1 Tax=Desulfobulbaceae bac... [more]
A0A6J4FLM4_9PROT1.370e-7452.94Isoprenyl transferase n=2 Tax=Magnetospirillum Tax... [more]
A0A0P1I837_9RHOB5.330e-7452.74Isoprenyl transferase n=8 Tax=Roseobacteraceae Tax... [more]
A0A4P5VVJ8_9DELT1.950e-7350.21Isoprenyl transferase n=1 Tax=Deltaproteobacteria ... [more]
A0A5P9GE94_9RHOB4.310e-7350.81Isoprenyl transferase n=10 Tax=Roseobacteraceae Ta... [more]
UPI0010F957704.590e-7350.40polyprenyl diphosphate synthase n=1 Tax=Marimonas ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001441Decaprenyl diphosphate synthase-likeTIGRFAMTIGR00055TIGR00055coord: 34..269
e-value: 1.5E-73
score: 245.0
IPR001441Decaprenyl diphosphate synthase-likePFAMPF01255Prenyltransfcoord: 41..269
e-value: 4.6E-70
score: 235.6
IPR001441Decaprenyl diphosphate synthase-likePANTHERPTHR10291DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBERcoord: 32..269
IPR001441Decaprenyl diphosphate synthase-likeHAMAPMF_01139ISPTcoord: 34..270
score: 37.172836
IPR001441Decaprenyl diphosphate synthase-likeCDDcd00475Cis_IPPScoord: 37..261
e-value: 6.08951E-111
score: 317.778
IPR036424Decaprenyl diphosphate synthase-like superfamilyGENE3D3.40.1180.10coord: 2..264
e-value: 2.6E-87
score: 294.0
IPR036424Decaprenyl diphosphate synthase-like superfamilySUPERFAMILY64005Undecaprenyl diphosphate synthasecoord: 31..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR10291:SF0DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE COMPLEX SUBUNIT DHDDScoord: 32..269
IPR018520Di-trans-poly-cis-decaprenylcistransferase-like, conserved sitePROSITEPS01066UPP_SYNTHASEcoord: 215..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_101contigContig_101:339878..343890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351864mRNA_10810Tribonema minus UTEX_B_3156 mRNAContig_101 339878..343897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351864|estExt_Genemark1.C_Ctg_1010041 ID=Trimin1|351864|estExt_Genemark1.C_Ctg_1010041|Name=jgi.p|Trimin1|351864|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=282bp
MVQQLPERSATSQESTWSPHHHQHHDAKGGLRRVPKHVAFVLDGNGRWAT
RRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVA
SLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETSV
ADAQQSGDQMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVL
QGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFK
AADLVEAFQDFGTRQRRFGGVAANSPSQSQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001441UPP_synth-like
IPR036424UPP_synth-like_sf
IPR018520UPP_synth-like_CS