Trimin1|351862|estExt_Genemark1.C_Ctg_1010039 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351862
Unique NameTrimin1|351862|estExt_Genemark1.C_Ctg_1010039
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length407
Homology
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A835ZK29_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK29_9STRA)

HSP 1 Score: 800 bits (2066), Expect = 2.230e-292
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0
Query:    1 MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 406
            MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL
Sbjct:    1 MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 406          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: D7G282_ECTSI (3-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G282_ECTSI)

HSP 1 Score: 601 bits (1549), Expect = 2.680e-213
Identity = 300/379 (79.16%), Postives = 332/379 (87.60%), Query Frame = 0
Query:   28 RAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 406
            RA   + S  L M    KDSY + LLPGDGIGPEIT ATV A++P   LFK+ FKEALIGGAAIDA GSP+PD+T    KASDS+LL+AIGGPKWDGNPRE RPETGLLAMR  LGLFANLRPAKV+++L+DAS+LKPEIV+GVDIMVVRELTGDVYFGTPKGI+   SGER GYNNMIY+EHEVERIA+VA+DVA KRGKR+CSVDKANVLDVSQLWRDVVI++ +D YP+VELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+GNP GPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRP EAD++E AVD V+D+GYAT DI R+G   VGCKEMG +V E L KL+
Sbjct:   32 RAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTLALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSED-YPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATNDIQREGTTAVGCKEMGDKVKEELAKLV 409          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A7S0F2Y7_9CRYP (3-isopropylmalate dehydrogenase n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0F2Y7_9CRYP)

HSP 1 Score: 535 bits (1379), Expect = 9.290e-188
Identity = 281/367 (76.57%), Postives = 304/367 (82.83%), Query Frame = 0
Query:   38 LHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEAL 402
            L MAV KKDSY +T LPGDGIGPEI  ATV   Q  +    FKMEFKEALIGGAA+DA   PFPD T +Q+K+SDSVLL+AIGGPKWD NPR++RPETGLL MRK LGLFANLRPA V+ QL DASTLKPE+V GVDIMVVRELTGDVYFG PKGI TT+ GERFGYNNM Y E EV RIA+VAFD+ARKRGKRVCSVDKANVLDVSQLWRDVVI   KD YPDVEL+H YVDNAAMQLIR PKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVG+PSGPGVFEP HGSAPDIAG DKANPLA ILSAAMM RYDL RP+ A  +E AV+ VLD G  T D+   G K VGCK+MG  V + +
Sbjct:   47 LSMAVKKKDSYFVTTLPGDGIGPEIMAATVKVCQAVAAKQGFKMEFKEALIGGAALDACNDPFPDETLKQMKSSDSVLLAAIGGPKWDANPRDKRPETGLLKMRKSLGLFANLRPATVLPQLADASTLKPEVVSGVDIMVVRELTGDVYFGEPKGI-TTKDGERFGYNNMCYKESEVRRIAKVAFDIARKRGKRVCSVDKANVLDVSQLWRDVVIETHKD-YPDVELSHMYVDNAAMQLIRNPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVFEPIHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPDAAQAIEDAVNKVLDDGVRTGDL---GGK-VGCKQMGDEVCKRI 407          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A7S0Z0Z5_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0Z5_9CRYP)

HSP 1 Score: 532 bits (1370), Expect = 7.940e-187
Identity = 273/371 (73.58%), Postives = 306/371 (82.48%), Query Frame = 0
Query:   32 RAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAE 400
            RA S  + MAV KKD Y+IT LPGDGIGPEI    + A    +K   F++E+KEALIGGAA+DA   P PDAT +Q++ASDS LL+AIGGPKWD NPRE RPETGLL MRK LGLFANLRPA V+ QL+DASTLKPE++ GVDIMVVRELTGDVYFG PKGIE  + GERFG+NNM Y E E+ RIA+VAFD+A KRGK+VCSVDKANVLDVSQLWRDVVI  +   YP+VELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVG+PSGPGV+EPCHGSAPDIAG DKANPLA ILSAAMM RYDL RPE AD LE AV+  LD G  TAD+  +    +GCK+MG+ VA+
Sbjct:   11 RAHSTSVSMAVKKKDKYTITTLPGDGIGPEIIAGAITACDAVAKKQGFEIEWKEALIGGAALDAHNDPCPDATLDQMRASDSCLLAAIGGPKWDKNPRELRPETGLLKMRKELGLFANLRPATVLDQLVDASTLKPEVIKGVDIMVVRELTGDVYFGAPKGIEERD-GERFGFNNMCYKESEIRRIAKVAFDLAMKRGKKVCSVDKANVLDVSQLWRDVVIE-EAAAYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVYEPCHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPEAADALEAAVNKALDDGLRTADLATENT--IGCKQMGEEVAK 377          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A7S2UN91_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UN91_9STRA)

HSP 1 Score: 532 bits (1370), Expect = 2.500e-186
Identity = 279/384 (72.66%), Postives = 313/384 (81.51%), Query Frame = 0
Query:   26 LPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIM--RDGCKPVGCKEMGQRVAEALEKL 405
            +P A +R GS     AV+KKDSYS+TLLPGDGIGPEIT AT   +    K   F +E KEALIGGAAIDA G PFP  + +Q +ASDSVLL+ IGG KWD NPRE RPE+GLL MRK +GLFANLRPAKV+ QL+DASTLK E+V+GVD+MVVRELTGDVYFGTPKGI+  + GER GYNNMIY E E+ RIARVA DVA KR  ++CSVDKANVLDVSQLWRDVVI + + E+PDVEL+H YVDNAAMQLIR P QFD +VTGNIFGDILSDEASMLVGSLGMLPSAS+G  SGPGVFEPCHGSAPDIAGQ+ +NPLAMILSAAMMLRYDL RP+EADLLE AV+  LDQG  TADI    DGCK VGC EMGQ VAE + K+
Sbjct:   22 VPSAGRRFGSSSAVSAVSKKDSYSVTLLPGDGIGPEITEATKVVLTALCKKTGFTIELKEALIGGAAIDAVGDPFPQESLDQCRASDSVLLACIGGYKWDSNPRELRPESGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIDVID-GERVGYNNMIYKESEIRRIARVAGDVASKRTGKLCSVDKANVLDVSQLWRDVVIEVCEKEFPDVELSHMYVDNAAMQLIRRPLQFDTIVTGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGQNMSNPLAMILSAAMMLRYDLERPDEADLLEKAVEAALDQGLRTADIKLESDGCKLVGCTEMGQAVAEFVTKI 403          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: K0TLJ0_THAOC (3-isopropylmalate dehydrogenase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLJ0_THAOC)

HSP 1 Score: 531 bits (1369), Expect = 2.970e-186
Identity = 277/385 (71.95%), Postives = 312/385 (81.04%), Query Frame = 0
Query:   24 PSLP--RAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMR--DGCKPVGCKEMGQRVAEAL 402
            PS P  R A R G      AV++KDSY ITLLPGDGIGPEI  +  + +        F++  +EALIGGAAIDA   PFPDAT E  +++DSVLLS IGG KWDGNPRE RPETGLL MRK +GLFANLRPAKV+ QL+DASTLK E+V+GVD+MVVRELTGDVYFG PKGI+T   G+R GYNNMIY E E+ERIARVA DVA KR  ++CSVDKANVLDVSQLWRDVV  +  DE+PDV+L+H YVDNAAMQLIRWPKQFD MVTGNIFGDILSDEASMLVGSLGMLPSAS+G  SGPGVFEPCHGSAPDIAG+DKANPLA+ILSAAMMLRYDL R EEAD+LE AV+ VLDQG  TADI +  DGCK VGC EMG+ VA+ +
Sbjct:   21 PSAPGGRPAARLG------AVSRKDSYDITLLPGDGIGPEIMESAKSVLSALCDRCGFELNLREALIGGAAIDAVNDPFPDATLEACQSADSVLLSCIGGYKWDGNPRELRPETGLLKMRKSMGLFANLRPAKVLDQLIDASTLKREVVEGVDVMVVRELTGDVYFGAPKGIDTDADGKRVGYNNMIYSEGEIERIARVAGDVASKRNGKLCSVDKANVLDVSQLWRDVVTDVITDEFPDVDLSHMYVDNAAMQLIRWPKQFDTMVTGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGEDKANPLALILSAAMMLRYDLARGEEADILEAAVETVLDQGLRTADIKQEDDGCKLVGCIEMGKAVADVV 398          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A6V1T6U9_HETAK (3-isopropylmalate dehydrogenase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T6U9_HETAK)

HSP 1 Score: 531 bits (1368), Expect = 3.920e-186
Identity = 276/374 (73.80%), Postives = 306/374 (81.82%), Query Frame = 0
Query:   34 GSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL-FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 406
            GS    MAV KKDSY ITLL GDGIGPEIT ATVAA+ P  KL FKM FKEALIGGAA+DA   PFPD + EQ K SDSVLLS IGG KWD NPRE RPETGLL MRK +GLFANLRPAKV+ QL+ ASTLK E+++GVDIMVVRELTGDVYFGTPKG ET + G+R  YNNMIY E E+ RIA+VAFDVA KRGK V S+DKANVLDVSQLWRDVVI   K+ YP+VEL H Y+DNAAMQLIRWPKQFD +V GN+FGDI+SDEASMLVGSLGMLPSAS+G+PSGPGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL R EEA +LE AV+ VLD    T DI   G   VGCK+MG+ VA+ +  L+
Sbjct:   28 GSARTFMAVEKKDSYDITLLTGDGIGPEITQATVAALAPLEKLGFKMNFKEALIGGAALDAVNHPFPDESLEQCKGSDSVLLSCIGGYKWDKNPRELRPETGLLRMRKEMGLFANLRPAKVIPQLMGASTLKEEVLEGVDIMVVRELTGDVYFGTPKGTETRD-GKRVAYNNMIYDEEEIRRIAKVAFDVAMKRGKNVYSIDKANVLDVSQLWRDVVIEESKN-YPEVELNHMYIDNAAMQLIRWPKQFDTIVCGNLFGDIISDEASMLVGSLGMLPSASIGDPSGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSRAEEAQMLEDAVEQVLDI-CRTVDIAGGGLPTVGCKQMGEEVAKLVAALV 398          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A6S8RM19_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8RM19_9STRA)

HSP 1 Score: 531 bits (1369), Expect = 3.950e-186
Identity = 289/409 (70.66%), Postives = 320/409 (78.24%), Query Frame = 0
Query:    1 MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMR--DGCKPVGCKEMGQRVAEALEKL 405
            M  R +AVAA      G ++  TP+ P A QR     L+MAV K DSYSITLLPGDGIGPEITTAT   +    K   F ME KEALIGG AID    PFP+ T +Q   SDSVLL+ IGG KWD NPRE RPETGLL MRK +GLFANLRPAKV+ QLLDASTLK E+V+GVD+MVVRELTGDVYFGTPKGIE  + G+R G+NNMIY E+E+ RIARVA DVA KRG ++CSVDKANVLDVSQLWR+V       E+PDVEL+H YVDNAAMQLIRWPKQFD MVTGNIFGDILSDEASMLVGSLGMLPSAS+G  SGPGVFEP HGSAPDIAG+DKANPLAMILSAAMML YDL RPEEA LLE AV+  LDQG  TADI +  DGCK VGCKEMG  VA+ + K+
Sbjct:    5 MSYRCMAVAAL----LGASSAFTPA-PTAFQRTQRTSLNMAVPKSDSYSITLLPGDGIGPEITTATKEVLGALCKRCGFTMEMKEALIGGCAIDEKNDPFPEETLKQCLESDSVLLACIGGYKWDSNPRELRPETGLLKMRKEMGLFANLRPAKVIPQLLDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIEERD-GQRVGFNNMIYGENEIVRIARVAGDVASKRGGKLCSVDKANVLDVSQLWREVTTDTITKEFPDVELSHMYVDNAAMQLIRWPKQFDTMVTGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPIHGSAPDIAGEDKANPLAMILSAAMMLTYDLERPEEAALLEAAVEAALDQGLRTADIKQEGDGCKLVGCKEMGSVVADLVSKI 406          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A7S0N7T0_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N7T0_9CRYP)

HSP 1 Score: 524 bits (1349), Expect = 1.280e-183
Identity = 272/369 (73.71%), Postives = 304/369 (82.38%), Query Frame = 0
Query:   34 GSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAE 400
            G     MAV++KDSY +TLLPGDGIGPEI  A V A +  +    F + FKEALIGGAA+DA   P PD T +Q+KASDSVLL+AIGGPKWD NPRE RPETGLL MRK LGLFANLRPA V+ QL+DASTLKPE+V GVDIMVVRELTGDVYFG PKGI TT+ GERFG+NNM Y E EV RIA+VAFD+A KRG +VCSVDKANVLDVSQLWRDVVI  +  +YP VEL+H YVDNAAMQLIR PKQFDV+VTGNIFGDILSDEASMLVGSLGMLPSASVG+ SGPGVFEPCHGSAPDIAGQDKANPLA ILSAAMM RYDL RPE A+ LE AV+ VLD G  TAD+ R+    +GC++MG+ VA+
Sbjct:   14 GLTSSRMAVSRKDSYDVTLLPGDGIGPEIIKAAVVACKAVAAKQGFTINFKEALIGGAALDAHNDPLPDVTLKQMKASDSVLLAAIGGPKWDKNPRELRPETGLLRMRKALGLFANLRPATVLPQLIDASTLKPEVVAGVDIMVVRELTGDVYFGEPKGI-TTKDGERFGFNNMCYKESEVRRIAKVAFDIASKRGNKVCSVDKANVLDVSQLWRDVVIE-EHAKYPKVELSHMYVDNAAMQLIRNPKQFDVIVTGNIFGDILSDEASMLVGSLGMLPSASVGDRSGPGVFEPCHGSAPDIAGQDKANPLATILSAAMMFRYDLDRPEAAEALERAVNKVLDDGLRTADLARENT--IGCRQMGEEVAK 378          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A1Z5JD77_FISSO (3-isopropylmalate dehydrogenase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JD77_FISSO)

HSP 1 Score: 525 bits (1351), Expect = 1.860e-183
Identity = 281/406 (69.21%), Postives = 324/406 (79.80%), Query Frame = 0
Query:    4 RSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRD--GCKPVGCKEMGQRVAEALEKL 405
            R LA   A  L +  AAF+ PS+ R++  +   G   AV KKDSY++TLLPGDGIGPEIT AT   +Q  +    F++E+KEALIGGAAIDA   PFP  + EQ  ASDSVLL+ IGG KWD NPRE RPETGLL MRK +GLFANLRPAKV+ QL+DASTLK E+V+GVD+MVVRELTGDVYFGTPKGI+   +G+R GYNNMIY E E++RIARVA DVA KRG ++CSVDKANVLDVSQLWRDVV  +   ++P+VEL+H YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G  SGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMML+YDL RPEEA LLE AV+  LD G  T D+ +D  GCK VGC EMGQ VA+ + ++
Sbjct:    5 RFLAFLTASLLASPGAAFV-PSVQRSSSASSLLG---AVAKKDSYAVTLLPGDGIGPEITAATKQVLQALATRCNFRIEWKEALIGGAAIDAKNDPFPQESLEQCLASDSVLLACIGGYKWDKNPRELRPETGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIDMV-NGQRVGYNNMIYSESEIDRIARVAGDVASKRGGKLCSVDKANVLDVSQLWRDVVTDVITKDFPEVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLQYDLDRPEEAALLEKAVEAALDAGVRTPDLKQDNDGCKLVGCAEMGQVVAKLVAEI 404          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZK29_9STRA2.230e-292100.003-isopropylmalate dehydrogenase n=1 Tax=Tribonema ... [more]
D7G282_ECTSI2.680e-21379.163-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus... [more]
A0A7S0F2Y7_9CRYP9.290e-18876.573-isopropylmalate dehydrogenase n=3 Tax=Geminigera... [more]
A0A7S0Z0Z5_9CRYP7.940e-18773.583-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis... [more]
A0A7S2UN91_9STRA2.500e-18672.663-isopropylmalate dehydrogenase n=1 Tax=Attheya se... [more]
K0TLJ0_THAOC2.970e-18671.953-isopropylmalate dehydrogenase n=1 Tax=Thalassios... [more]
A0A6V1T6U9_HETAK3.920e-18673.803-isopropylmalate dehydrogenase n=1 Tax=Heterosigm... [more]
A0A6S8RM19_9STRA3.950e-18670.663-isopropylmalate dehydrogenase n=1 Tax=Ditylum br... [more]
A0A7S0N7T0_9CRYP1.280e-18373.713-isopropylmalate dehydrogenase n=1 Tax=Cryptomona... [more]
A0A1Z5JD77_FISSO1.860e-18369.213-isopropylmalate dehydrogenase n=2 Tax=Fistulifer... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024084Isopropylmalate dehydrogenase-like domainSMARTSM01329Iso_dh_2coord: 49..398
e-value: 5.3E-195
score: 663.8
IPR024084Isopropylmalate dehydrogenase-like domainPFAMPF00180Iso_dhcoord: 50..398
e-value: 3.2E-136
score: 454.1
NoneNo IPR availableGENE3D3.40.718.10Isopropylmalate Dehydrogenasecoord: 40..402
e-value: 1.3E-132
score: 444.2
NoneNo IPR availablePIRSRPIRSR000108-3PIRSR000108-3coord: 208..328
e-value: 3.4E-4
score: 17.3
NoneNo IPR availablePANTHERPTHR42979:SF13-ISOPROPYLMALATE DEHYDROGENASEcoord: 46..405
NoneNo IPR availableSUPERFAMILY53659Isocitrate/Isopropylmalate dehydrogenase-likecoord: 44..402
IPR004429Isopropylmalate dehydrogenaseTIGRFAMTIGR00169TIGR00169coord: 50..397
e-value: 1.9E-149
score: 495.4
IPR004429Isopropylmalate dehydrogenasePANTHERPTHR429793-ISOPROPYLMALATE DEHYDROGENASEcoord: 46..405
IPR004429Isopropylmalate dehydrogenaseHAMAPMF_01033LeuB_type1coord: 48..402
score: 49.622124
IPR019818Isocitrate/isopropylmalate dehydrogenase, conserved sitePROSITEPS00470IDH_IMDHcoord: 288..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_101contigContig_101:304123..310447 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351862mRNA_10808Tribonema minus UTEX_B_3156 mRNAContig_101 303793..310456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351862|estExt_Genemark1.C_Ctg_1010039 ID=Trimin1|351862|estExt_Genemark1.C_Ctg_1010039|Name=jgi.p|Trimin1|351862|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=407bp
MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSI
TLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPD
ATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRP
AKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERF
GYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVI
RIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASM
LVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMM
LRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAE
ALEKLL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024084IsoPropMal-DH-like_dom
IPR004429Isopropylmalate_DH
IPR019818IsoCit/isopropylmalate_DH_CS