mRNA_10808 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351862
Unique NamemRNA_10808
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A835ZK29_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK29_9STRA)

HSP 1 Score: 801 bits (2068), Expect = 9.860e-291
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 1
Query:   10 MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 1227
            MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL
Sbjct:    1 MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 406          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: D7G282_ECTSI (3-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G282_ECTSI)

HSP 1 Score: 601 bits (1549), Expect = 1.980e-211
Identity = 300/379 (79.16%), Postives = 332/379 (87.60%), Query Frame = 1
Query:   91 RAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 1227
            RA   + S  L M    KDSY + LLPGDGIGPEIT ATV A++P   LFK+ FKEALIGGAAIDA GSP+PD+T    KASDS+LL+AIGGPKWDGNPRE RPETGLLAMR  LGLFANLRPAKV+++L+DAS+LKPEIV+GVDIMVVRELTGDVYFGTPKGI+   SGER GYNNMIY+EHEVERIA+VA+DVA KRGKR+CSVDKANVLDVSQLWRDVVI++ +D YP+VELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+GNP GPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRP EAD++E AVD V+D+GYAT DI R+G   VGCKEMG +V E L KL+
Sbjct:   32 RAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTLALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSED-YPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATNDIQREGTTAVGCKEMGDKVKEELAKLV 409          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A7S0F2Y7_9CRYP (3-isopropylmalate dehydrogenase n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0F2Y7_9CRYP)

HSP 1 Score: 535 bits (1379), Expect = 6.280e-186
Identity = 281/367 (76.57%), Postives = 304/367 (82.83%), Query Frame = 1
Query:  121 LHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEAL 1215
            L MAV KKDSY +T LPGDGIGPEI  ATV   Q  +    FKMEFKEALIGGAA+DA   PFPD T +Q+K+SDSVLL+AIGGPKWD NPR++RPETGLL MRK LGLFANLRPA V+ QL DASTLKPE+V GVDIMVVRELTGDVYFG PKGI TT+ GERFGYNNM Y E EV RIA+VAFD+ARKRGKRVCSVDKANVLDVSQLWRDVVI   KD YPDVEL+H YVDNAAMQLIR PKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVG+PSGPGVFEP HGSAPDIAG DKANPLA ILSAAMM RYDL RP+ A  +E AV+ VLD G  T D+   G K VGCK+MG  V + +
Sbjct:   47 LSMAVKKKDSYFVTTLPGDGIGPEIMAATVKVCQAVAAKQGFKMEFKEALIGGAALDACNDPFPDETLKQMKSSDSVLLAAIGGPKWDANPRDKRPETGLLKMRKSLGLFANLRPATVLPQLADASTLKPEVVSGVDIMVVRELTGDVYFGEPKGI-TTKDGERFGYNNMCYKESEVRRIAKVAFDIARKRGKRVCSVDKANVLDVSQLWRDVVIETHKD-YPDVELSHMYVDNAAMQLIRNPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVFEPIHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPDAAQAIEDAVNKVLDDGVRTGDL---GGK-VGCKQMGDEVCKRI 407          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A7S0Z0Z5_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0Z5_9CRYP)

HSP 1 Score: 532 bits (1370), Expect = 5.330e-185
Identity = 273/371 (73.58%), Postives = 306/371 (82.48%), Query Frame = 1
Query:  103 RAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAE 1209
            RA S  + MAV KKD Y+IT LPGDGIGPEI    + A    +K   F++E+KEALIGGAA+DA   P PDAT +Q++ASDS LL+AIGGPKWD NPRE RPETGLL MRK LGLFANLRPA V+ QL+DASTLKPE++ GVDIMVVRELTGDVYFG PKGIE  + GERFG+NNM Y E E+ RIA+VAFD+A KRGK+VCSVDKANVLDVSQLWRDVVI  +   YP+VELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVG+PSGPGV+EPCHGSAPDIAG DKANPLA ILSAAMM RYDL RPE AD LE AV+  LD G  TAD+  +    +GCK+MG+ VA+
Sbjct:   11 RAHSTSVSMAVKKKDKYTITTLPGDGIGPEIIAGAITACDAVAKKQGFEIEWKEALIGGAALDAHNDPCPDATLDQMRASDSCLLAAIGGPKWDKNPRELRPETGLLKMRKELGLFANLRPATVLDQLVDASTLKPEVIKGVDIMVVRELTGDVYFGAPKGIEERD-GERFGFNNMCYKESEIRRIAKVAFDLAMKRGKKVCSVDKANVLDVSQLWRDVVIE-EAAAYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVYEPCHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPEAADALEAAVNKALDDGLRTADLATENT--IGCKQMGEEVAK 377          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A6S8RM19_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8RM19_9STRA)

HSP 1 Score: 532 bits (1371), Expect = 1.320e-184
Identity = 289/409 (70.66%), Postives = 320/409 (78.24%), Query Frame = 1
Query:   10 MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMR--DGCKPVGCKEMGQRVAEALEKL 1224
            M  R +AVAA      G ++  TP+ P A QR     L+MAV K DSYSITLLPGDGIGPEITTAT   +    K   F ME KEALIGG AID    PFP+ T +Q   SDSVLL+ IGG KWD NPRE RPETGLL MRK +GLFANLRPAKV+ QLLDASTLK E+V+GVD+MVVRELTGDVYFGTPKGIE  + G+R G+NNMIY E+E+ RIARVA DVA KRG ++CSVDKANVLDVSQLWR+V       E+PDVEL+H YVDNAAMQLIRWPKQFD MVTGNIFGDILSDEASMLVGSLGMLPSAS+G  SGPGVFEP HGSAPDIAG+DKANPLAMILSAAMML YDL RPEEA LLE AV+  LDQG  TADI +  DGCK VGCKEMG  VA+ + K+
Sbjct:    5 MSYRCMAVAAL----LGASSAFTPA-PTAFQRTQRTSLNMAVPKSDSYSITLLPGDGIGPEITTATKEVLGALCKRCGFTMEMKEALIGGCAIDEKNDPFPEETLKQCLESDSVLLACIGGYKWDSNPRELRPETGLLKMRKEMGLFANLRPAKVIPQLLDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIEERD-GQRVGFNNMIYGENEIVRIARVAGDVASKRGGKLCSVDKANVLDVSQLWREVTTDTITKEFPDVELSHMYVDNAAMQLIRWPKQFDTMVTGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPIHGSAPDIAGEDKANPLAMILSAAMMLTYDLERPEEAALLEAAVEAALDQGLRTADIKQEGDGCKLVGCKEMGSVVADLVSKI 406          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A7S2UN91_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UN91_9STRA)

HSP 1 Score: 532 bits (1370), Expect = 1.680e-184
Identity = 279/384 (72.66%), Postives = 313/384 (81.51%), Query Frame = 1
Query:   85 LPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIM--RDGCKPVGCKEMGQRVAEALEKL 1224
            +P A +R GS     AV+KKDSYS+TLLPGDGIGPEIT AT   +    K   F +E KEALIGGAAIDA G PFP  + +Q +ASDSVLL+ IGG KWD NPRE RPE+GLL MRK +GLFANLRPAKV+ QL+DASTLK E+V+GVD+MVVRELTGDVYFGTPKGI+  + GER GYNNMIY E E+ RIARVA DVA KR  ++CSVDKANVLDVSQLWRDVVI + + E+PDVEL+H YVDNAAMQLIR P QFD +VTGNIFGDILSDEASMLVGSLGMLPSAS+G  SGPGVFEPCHGSAPDIAGQ+ +NPLAMILSAAMMLRYDL RP+EADLLE AV+  LDQG  TADI    DGCK VGC EMGQ VAE + K+
Sbjct:   22 VPSAGRRFGSSSAVSAVSKKDSYSVTLLPGDGIGPEITEATKVVLTALCKKTGFTIELKEALIGGAAIDAVGDPFPQESLDQCRASDSVLLACIGGYKWDSNPRELRPESGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIDVID-GERVGYNNMIYKESEIRRIARVAGDVASKRTGKLCSVDKANVLDVSQLWRDVVIEVCEKEFPDVELSHMYVDNAAMQLIRRPLQFDTIVTGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGQNMSNPLAMILSAAMMLRYDLERPDEADLLEKAVEAALDQGLRTADIKLESDGCKLVGCTEMGQAVAEFVTKI 403          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: K0TLJ0_THAOC (3-isopropylmalate dehydrogenase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLJ0_THAOC)

HSP 1 Score: 531 bits (1369), Expect = 1.990e-184
Identity = 277/385 (71.95%), Postives = 312/385 (81.04%), Query Frame = 1
Query:   79 PSLP--RAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMR--DGCKPVGCKEMGQRVAEAL 1215
            PS P  R A R G      AV++KDSY ITLLPGDGIGPEI  +  + +        F++  +EALIGGAAIDA   PFPDAT E  +++DSVLLS IGG KWDGNPRE RPETGLL MRK +GLFANLRPAKV+ QL+DASTLK E+V+GVD+MVVRELTGDVYFG PKGI+T   G+R GYNNMIY E E+ERIARVA DVA KR  ++CSVDKANVLDVSQLWRDVV  +  DE+PDV+L+H YVDNAAMQLIRWPKQFD MVTGNIFGDILSDEASMLVGSLGMLPSAS+G  SGPGVFEPCHGSAPDIAG+DKANPLA+ILSAAMMLRYDL R EEAD+LE AV+ VLDQG  TADI +  DGCK VGC EMG+ VA+ +
Sbjct:   21 PSAPGGRPAARLG------AVSRKDSYDITLLPGDGIGPEIMESAKSVLSALCDRCGFELNLREALIGGAAIDAVNDPFPDATLEACQSADSVLLSCIGGYKWDGNPRELRPETGLLKMRKSMGLFANLRPAKVLDQLIDASTLKREVVEGVDVMVVRELTGDVYFGAPKGIDTDADGKRVGYNNMIYSEGEIERIARVAGDVASKRNGKLCSVDKANVLDVSQLWRDVVTDVITDEFPDVDLSHMYVDNAAMQLIRWPKQFDTMVTGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGEDKANPLALILSAAMMLRYDLARGEEADILEAAVETVLDQGLRTADIKQEDDGCKLVGCIEMGKAVADVV 398          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A6V1T6U9_HETAK (3-isopropylmalate dehydrogenase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T6U9_HETAK)

HSP 1 Score: 531 bits (1368), Expect = 2.630e-184
Identity = 276/374 (73.80%), Postives = 306/374 (81.82%), Query Frame = 1
Query:  109 GSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL-FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 1227
            GS    MAV KKDSY ITLL GDGIGPEIT ATVAA+ P  KL FKM FKEALIGGAA+DA   PFPD + EQ K SDSVLLS IGG KWD NPRE RPETGLL MRK +GLFANLRPAKV+ QL+ ASTLK E+++GVDIMVVRELTGDVYFGTPKG ET + G+R  YNNMIY E E+ RIA+VAFDVA KRGK V S+DKANVLDVSQLWRDVVI   K+ YP+VEL H Y+DNAAMQLIRWPKQFD +V GN+FGDI+SDEASMLVGSLGMLPSAS+G+PSGPGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL R EEA +LE AV+ VLD    T DI   G   VGCK+MG+ VA+ +  L+
Sbjct:   28 GSARTFMAVEKKDSYDITLLTGDGIGPEITQATVAALAPLEKLGFKMNFKEALIGGAALDAVNHPFPDESLEQCKGSDSVLLSCIGGYKWDKNPRELRPETGLLRMRKEMGLFANLRPAKVIPQLMGASTLKEEVLEGVDIMVVRELTGDVYFGTPKGTETRD-GKRVAYNNMIYDEEEIRRIAKVAFDVAMKRGKNVYSIDKANVLDVSQLWRDVVIEESKN-YPEVELNHMYIDNAAMQLIRWPKQFDTIVCGNLFGDIISDEASMLVGSLGMLPSASIGDPSGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSRAEEAQMLEDAVEQVLDI-CRTVDIAGGGLPTVGCKQMGEEVAKLVAALV 398          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A1Z5JD77_FISSO (3-isopropylmalate dehydrogenase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JD77_FISSO)

HSP 1 Score: 525 bits (1353), Expect = 6.160e-182
Identity = 281/406 (69.21%), Postives = 324/406 (79.80%), Query Frame = 1
Query:   19 RSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRD--GCKPVGCKEMGQRVAEALEKL 1224
            R LA   A  L +  AAF+ PS+ R++  +   G   AV KKDSY++TLLPGDGIGPEIT AT   +Q  +    F++E+KEALIGGAAIDA   PFP  + EQ  ASDSVLL+ IGG KWD NPRE RPETGLL MRK +GLFANLRPAKV+ QL+DASTLK E+V+GVD+MVVRELTGDVYFGTPKGI+   +G+R GYNNMIY E E++RIARVA DVA KRG ++CSVDKANVLDVSQLWRDVV  +   ++P+VEL+H YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G  SGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMML+YDL RPEEA LLE AV+  LD G  T D+ +D  GCK VGC EMGQ VA+ + ++
Sbjct:    5 RFLAFLTASLLASPGAAFV-PSVQRSSSASSLLG---AVAKKDSYAVTLLPGDGIGPEITAATKQVLQALATRCNFRIEWKEALIGGAAIDAKNDPFPQESLEQCLASDSVLLACIGGYKWDKNPRELRPETGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIDMV-NGQRVGYNNMIYSESEIDRIARVAGDVASKRGGKLCSVDKANVLDVSQLWRDVVTDVITKDFPEVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLQYDLDRPEEAALLEKAVEAALDAGVRTPDLKQDNDGCKLVGCAEMGQVVAKLVAEI 404          
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A7S0N7T0_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N7T0_9CRYP)

HSP 1 Score: 524 bits (1349), Expect = 8.510e-182
Identity = 272/369 (73.71%), Postives = 304/369 (82.38%), Query Frame = 1
Query:  109 GSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAE 1209
            G     MAV++KDSY +TLLPGDGIGPEI  A V A +  +    F + FKEALIGGAA+DA   P PD T +Q+KASDSVLL+AIGGPKWD NPRE RPETGLL MRK LGLFANLRPA V+ QL+DASTLKPE+V GVDIMVVRELTGDVYFG PKGI TT+ GERFG+NNM Y E EV RIA+VAFD+A KRG +VCSVDKANVLDVSQLWRDVVI  +  +YP VEL+H YVDNAAMQLIR PKQFDV+VTGNIFGDILSDEASMLVGSLGMLPSASVG+ SGPGVFEPCHGSAPDIAGQDKANPLA ILSAAMM RYDL RPE A+ LE AV+ VLD G  TAD+ R+    +GC++MG+ VA+
Sbjct:   14 GLTSSRMAVSRKDSYDVTLLPGDGIGPEIIKAAVVACKAVAAKQGFTINFKEALIGGAALDAHNDPLPDVTLKQMKASDSVLLAAIGGPKWDKNPRELRPETGLLRMRKALGLFANLRPATVLPQLIDASTLKPEVVAGVDIMVVRELTGDVYFGEPKGI-TTKDGERFGFNNMCYKESEVRRIAKVAFDIASKRGNKVCSVDKANVLDVSQLWRDVVIE-EHAKYPKVELSHMYVDNAAMQLIRNPKQFDVIVTGNIFGDILSDEASMLVGSLGMLPSASVGDRSGPGVFEPCHGSAPDIAGQDKANPLATILSAAMMFRYDLDRPEAAEALERAVNKVLDDGLRTADLARENT--IGCRQMGEEVAK 378          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZK29_9STRA9.860e-291100.003-isopropylmalate dehydrogenase n=1 Tax=Tribonema ... [more]
D7G282_ECTSI1.980e-21179.163-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus... [more]
A0A7S0F2Y7_9CRYP6.280e-18676.573-isopropylmalate dehydrogenase n=3 Tax=Geminigera... [more]
A0A7S0Z0Z5_9CRYP5.330e-18573.583-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis... [more]
A0A6S8RM19_9STRA1.320e-18470.663-isopropylmalate dehydrogenase n=1 Tax=Ditylum br... [more]
A0A7S2UN91_9STRA1.680e-18472.663-isopropylmalate dehydrogenase n=1 Tax=Attheya se... [more]
K0TLJ0_THAOC1.990e-18471.953-isopropylmalate dehydrogenase n=1 Tax=Thalassios... [more]
A0A6V1T6U9_HETAK2.630e-18473.803-isopropylmalate dehydrogenase n=1 Tax=Heterosigm... [more]
A0A1Z5JD77_FISSO6.160e-18269.213-isopropylmalate dehydrogenase n=2 Tax=Fistulifer... [more]
A0A7S0N7T0_9CRYP8.510e-18273.713-isopropylmalate dehydrogenase n=1 Tax=Cryptomona... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_101contigContig_101:303793..310456 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351862|estExt_Genemark1.C_Ctg_1010039
BRITEbr01601,ko00000,ko00001,ko00002,ko01000,ko04121
KEGG rclassRC00084,RC00114,RC00417,RC03036
KEGG ReactionR00994,R04426,R08621,R08625,R08629,R08636,R08642,R08646,R10052
KEGG ModuleM00432,M00535
KEGG Pathwayko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230
KEGG koko:K00052,ko:K21360,ko:K22382
EC1.1.1.85
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009651,GO:0009941,GO:0009987,GO:0016143,GO:0016144,GO:0019748,GO:0019757,GO:0019758,GO:0019760,GO:0019761,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0050896,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
Description3-isopropylmalate dehydrogenase activity
COG categoryCE
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0473@1|root,KOG0786@2759|Eukaryota
Evalue4.4e-214
Seed ortholog2880.D7G282
Hectar predicted targeting categorysignal peptide
Ec32 ortholog description3-isopropylmalate dehydrogenase
Ec32 orthologEc-16_002120.1
TranscriptId352184
TrackFilteredModels1
ProteinId351862
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351862gene_10808Tribonema minus UTEX_B_3156 geneContig_101 303793..310456 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351862Trimin1|351862|estExt_Genemark1.C_Ctg_1010039Tribonema minus UTEX_B_3156 polypeptideContig_101 304123..310447 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10808_10exon_10808_10Tribonema minus UTEX_B_3156 exonContig_101 303793..304219 -
exon_10808_9exon_10808_9Tribonema minus UTEX_B_3156 exonContig_101 304847..304959 -
exon_10808_8exon_10808_8Tribonema minus UTEX_B_3156 exonContig_101 305228..305419 -
exon_10808_7exon_10808_7Tribonema minus UTEX_B_3156 exonContig_101 306546..306731 -
exon_10808_6exon_10808_6Tribonema minus UTEX_B_3156 exonContig_101 308112..308177 -
exon_10808_5exon_10808_5Tribonema minus UTEX_B_3156 exonContig_101 308508..308576 -
exon_10808_4exon_10808_4Tribonema minus UTEX_B_3156 exonContig_101 308977..309111 -
exon_10808_3exon_10808_3Tribonema minus UTEX_B_3156 exonContig_101 309521..309656 -
exon_10808_2exon_10808_2Tribonema minus UTEX_B_3156 exonContig_101 309973..310091 -
exon_10808_1exon_10808_1Tribonema minus UTEX_B_3156 exonContig_101 310340..310456 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_10808UTR3_10808Tribonema minus UTEX_B_3156 three_prime_UTRContig_101 303793..304122 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10808CDS_10808Tribonema minus UTEX_B_3156 CDSContig_101 310340..310447 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_10808UTR5_10808Tribonema minus UTEX_B_3156 five_prime_UTRContig_101 310448..310456 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10808 ID=mRNA_10808|Name=jgi.p|Trimin1|351862|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1560bp|location=Sequence derived from alignment at Contig_101:303793..310456- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATTGGTATCATGGGCAAGCGCTCGCTGGCGGTAGCGGCCGCAGGGGCGCT
CTGCGCCGGCTGCGCAGCCTTCATCACACCCAGCCTGCCCAGGGCAGCCC
AGCGGGCGGGATCCAGGGGCCTCCACATGGCGGTGACGAAGAAGGACTCG
TACTCCATTACACTGCTGCCCGGCGATGGGATCGGGCCGGAAATCACAAC
AGCCACCGTGGCTGCGATTCAGCCTTTCTCCAAGCTGTTCAAGATGGAAT
TTAAGGAAGCACTGATTGGCGGCGCTGCTATTGACGCAACTGGCTCCCCG
TTCCCAGATGCAACGTTTGAGCAGATCAAGGCATCTGACTCTGTTCTCCT
CAGTGCTATTGGAGGGCCCAAGTGGGACGGCAATCCGCGGGAGCAGCGGC
CGGAAACGGGGCTACTGGCCATGCGCAAGGGGCTGGGGCTCTTTGCCAAT
CTGCGACCTGCCAAGGTGGTGCGGCAGCTGCTTGACGCTTCCACCCTCAA
ACCTGAGATCGTGGATGGTGTGGACATAATGGTGGTACGCGAGCTCACCG
GCGACGTGTACTTTGGTACCCCCAAGGGGATTGAGACGACGGAGTCTGGA
GAGCGGTTTGGCTACAACAACATGATATACTACGAACACGAGGTGGAGCG
GATTGCGCGCGTGGCATTTGACGTCGCACGCAAGCGCGGCAAGCGCGTGT
GCAGCGTGGACAAGGCCAATGTGCTGGACGTGAGCCAGCTGTGGCGGGAC
GTGGTGATTCGCATACAGAAGGACGAGTACCCGGACGTGGAGCTCACACA
CCAATATGTGGACAACGCCGCCATGCAGCTTATCCGGTGGCCGAAGCAGT
TTGACGTCATGGTCACGGGCAACATTTTTGGCGACATTCTCTCGGATGAG
GCCTCCATGCTTGTGGGATCACTGGGCATGCTGCCCTCTGCCTCCGTCGG
CAACCCATCCGGGCCCGGTGTGTTTGAGCCCTGCCATGGTTCCGCACCGG
ACATTGCTGGACAAGACAAGGCCAACCCCCTTGCCATGATCCTGTCAGCG
GCAATGATGTTGCGCTATGACCTAGGCAGGCCAGAAGAGGCGGACTTGCT
GGAGACGGCCGTTGACAACGTGCTGGACCAGGGATACGCCACCGCCGACA
TCATGCGCGACGGCTGCAAGCCAGTGGGCTGCAAGGAGATGGGGCAGCGC
GTTGCAGAGGCCCTGGAAAAGCTGCTCTAGAGTGACGCTCCGCCTTTGTA
ACTGCCACACGAGACAAGTTGCAGTGCTTGGATGGATCTGACATCACGAC
GCCGTCTTTGTAACTGCCACATGGGACAGTTACACTGCTTGATGGACGGG
AGTCTGATGTCAAATCAGCGACCCCCAAAAATCAGATCGTTGAGCGCTGC
TGCGTGCGCATCCGCTAAGCTTGGAAGCTACGTGAGTGCTGCAGTAGGGG
CACTGCTGCAAGTATGCACACCGGAACGGGAATACACAGTGGAGCAGCTG
CAATGCGCGCTTCCACAAATGAACATCACAGACCCTAATAGACACATCCG
TTGCATCATA
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protein sequence of jgi.p|Trimin1|351862

>Trimin1|351862|estExt_Genemark1.C_Ctg_1010039 ID=Trimin1|351862|estExt_Genemark1.C_Ctg_1010039|Name=jgi.p|Trimin1|351862|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=407bp
MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSI
TLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPD
ATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRP
AKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERF
GYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVI
RIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASM
LVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMM
LRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAE
ALEKLL*
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mRNA from alignment at Contig_101:303793..310456-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10808 ID=mRNA_10808|Name=jgi.p|Trimin1|351862|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6664bp|location=Sequence derived from alignment at Contig_101:303793..310456- (Tribonema minus UTEX_B_3156 )
ATTGGTATCATGGGCAAGCGCTCGCTGGCGGTAGCGGCCGCAGGGGCGCT CTGCGCCGGCTGCGCAGCCTTCATCACACCCAGCCTGCCCAGGGCAGCCC AGCGGGCGGGATCCAGGGTGAGCTTGTAATGTATCATTTTGGGCATGTTT CTTGCAGACTGGCTATGCGAGACTGTACATGATGCATTTGCATCCGTCCT CATGGTCAGCGTTCTGGATCCTTGCAAGGTTGCCTGCGGAGGCAGAGTAG GTACGCAACCTGCCGTCAACCCTTGTTGATCATGTCTGGCTCTGCTTTGC TCGTTGTATGCGTGTGTGCGTGGCCAACACAACACACATTTGCTGCAACC ATGGCGTGCTTGCAGGGCCTCCACATGGCGGTGACGAAGAAGGACTCGTA CTCCATTACACTGCTGCCCGGCGATGGGATCGGGCCGGAAATCACAACAG CCACCGTGGCTGCGATTCAGCCTTTCTCCAAGCTGTGAGTGACAAGGCTA TATTTTGTGCAGCTTGGGACAGTTATACGCTGCAGTGGGACAGTGTTGCA TGACGTGTCTCAAAACCGCATTCGCCCAGTGTGGTAGGCCAGCTGTTTTG GGAAGTTGAGAAAGCATGCAACCAGCACCTGAAATGGCTTGGCTGCTATC CTTGCTGCAGTGCACCACCGTTTGCATCCCATCCCCCTGCACTTGATCTG TGCATGAATGTGTTTTTGTATGCTGGTCGTTGAAACTACAGCACTTGCAG AGCATTTATATTTCTCTGACCACTGAGCTGTCGATGTAATGCTGCCACAG GTTCAAGATGGAATTTAAGGAAGCACTGATTGGCGGCGCTGCTATTGACG CAACTGGCTCCCCGTTCCCAGATGCAACGTTTGAGCAGATCAAGGCATCT GACTCTGTTCTCCTCAGTGCTATTGGAGGGCCCAAGGTACTTGCCGTACA ACTTGCCTGGCACTGCGATTGGTGGCACTGGCATTTTTGGGGAAACGCTC ATGAACTTTTGTTGTGCTAATACAGCTACCTTGCCAGCAATGCGCGTTCT CGCGAGCGTTTCGATCAAGCAGCGGGCACGGTCGCTCTTATGTGTTCTCG TTGTCTCTTGTTTTGTTTCAACGTTGCAACATTAAAAGAACATGTATTGA TACACTAGTACGCGCAACAACGACACTAGCGGTGCGTACACTTTCAGACC AAACTTACATACTTGAAGTACAAAAACCTGCAACTGAGCGTCGCTGCCAT GTCGCTCGCTGCCGCAGTGGGATGGCAACCCTATACTACATACATACATA CATACCTGCATCTGAGCGCTGCTACCATGCTGCTCCCTGCCGCAGTGGGA CGGCAATCCGCGGGAGCAGCGGCCGGAAACGGGGCTACTGGCCATGCGCA AGGGGCTGGGGCTCTTTGCCAATCTGCGACCTGCCAAGGTGGTGCGGCAG CTGCTTGACGCTTCCACCCTCAAACCTGAGGTGAGTGCTGCTCGCGCTAG TTGAGTCTTGAGTCTTGAGTAGAGTCTCGGGTGCTGCACTGCAATATGTC GAGTTGCTGAATGGCGTTGTCTGTCGCGCCCATGTGTGCCGTTGAGTGCC TGGTACTTCAACTTCACTGTTCGTAGTACCAGCTAGTGCAGGTCACATAG TATTGCAGCAGTGGTCCTCCGTCACGTGGCAGCAAATGCTGTTGATACGT TCCTGGTTCATGTCGACTGTGCTATGCGTGTCCGTGCACATGGGTTCATT GCATCAGGTGACAAATCCCGCGCGGCATTAGCCAAGCACATGCCTATTCT CCAAAACATAGTTGAAACAAATTTAAACACTCTCACTCACTCAGTGCACT ACTGCTGCAACATGCCTCCGTCGCCAACAGATCGTGGATGGTGTGGACAT AATGGTGGTACGCGAGCTCACCGGCGACGTGTACTTTGGTACCCCCAAGG TCAGTTTACACTTGAAGTTCTTTTGCATTTGACACTTGAAGTGTATTTGT GTTTCTCGAGCTCGGGTGGTTGATGGTGGCGCAGTGCTGCTATGATCGAT ACAACTCTAGTCGCATAGGCAAAATGCCTGTGTGCGATACTCTTAACATG CCAGTTATCCCACTGAGCAGCTTTTTCTTGCCACCACAACTACCGTGCTC ACAAATATGCCTTTGCACGATGTGTGCATTTGCATCACACCATGTGTTGA ATTATTGCAGAGTGTGAGCCACACTCCTATTGAAGTTATCGCTGTGCTGT TGCTCAATGCGCTCTGCTGCTCCTGCCAGGGGATTGAGACGACGGAGTCT GGAGAGCGGTTTGGCTACAACAACATGATATACTACGAACACGAGGTACG CAGGGCGATATCACAGCACCACACTTTCTAACCTTCAACCTTGACCCTCA GGTAGCATGGAAAGGAATCAAAAGATCGTAGAGCTCTAGGCGACAAGGAA TGGTTAGCCGCAAGGTAGCATATATTCCAAAACAACAATTCAGGATAACC CTCACCCTCATCCTAAGGTAATGTGAAGGTGCGGATTGGCTACAACATGA TATACCACGAACAGGAGGTACGCAGGGCCACACCATAGCACCACTTTCAA ATCTTCAACCCTAACCCTAAGGTAGCATACAAGTCACAGCAGCAATTCAG GATAACCCTCACCCTTATTGTAAGGCATGAAGGTGCGGGTTGGCTTCAAT CAACATGATATACTATGAACACGAGGTACGCAGGGCAACATCACAGCATC ACTTTGGATCGGTAGCACTTATTTCCCAGCAACAATGCAGGATAACCCTC GCACTCTAACTCTCAGGTGCCATGTCATGCACCTTCATCATGATGTGGAA TGTGACCGGTGATAACGGCGATGTGGAATCCTACTCACAAGCAATAACAG CATGCACTCAATTTGAGGTGATAGTGGCACAGTACAATCCTGCTTACAAG CAACAGGGGCATGTGCATGCCCGCCTTTGTTACAGTGACGCTGATGAGTG TACCAGTACGCGAGGTTACTTTGTTTGACACTTGTGCGCATACACGCTGT TCAATCACTCTGAGCATGTTGTCAATGTAGCCAAGGTGCTTGCTTTGATG TGGGTAACTGGAACGTCAATATATGTGGAGCAGATTGCGTGCATAGCGTT GACGTTGCGCACACCAGAACTTCAATATCAACAAGTGGAGTGCTTTGCGC GCGTGGCCTTTGACATAGCTAGACAAGCATAGCAGGCCATCCCGCCGTTT TGACAGCGACGTTTCACAGTGACACACAGCTCTTTCACCTAAACTTCATC GATGAGTGCACCATCAAATCACGTGTTGTGGCTCACAACAGGTGGAGCGG ACCGCATACATGGTCTTTGACGTCGCGCGGCAAGAGCGTGTGCAGTGTGG GACAAAGCCAACGCCAGTAACCTCAATAACATTTCATCCAGAGTGACGCT GAGCTTCTGGACCATCACAACCTACTGCCTTGGCCACTGAATATTGCATA AAATGCTGTAATGCCAACCTTGCTTTTTCAAACCTCAACCTCAACAGGTG GAGCGGATTGCGCGCGTGGCATTTGACGTCGCGCGGCAAGCGCGTGTGCA GCGTGGACAAGGCCAACGCCACTTACTTCAATAACATTTTTACAGCGGTT CACAGAGTACTGCTGTTGTCACTTCGATTCTCATAGTACGCTATTATCAC CTTTGGCCGTTTCAAACCTCAACAGGTGGAGCGGATTGCGCGCGTGGCAT TTGACGTCGCACGCAAGCGCGGCAAGCGCGTGTGCAGCGTGGACAAGGCC AATGTGCTGGACGTGAGCCAGCTGTGGCGGGACGTGGTGATTCGCATACA GAAGGACGAGTACCCGGACGTGGAGCTCACACACCAATATGTGGACAACG CCGCCATGCAGGTATACATTTATGCAACTGTTATTCGTCGATTACATATG GTTGTACACTTTGTGAAGTACATGACTGAATGAGTATGTATCGACTATGT ATGATTCATATGTACAGTAACGAGTGCAGAGGGAAGAGTATACCGATGTG GACTTCACGCACCAGAGTTTGCGTAAGGCCTCCATGCGGGTGCATGTTAC ATGCATATTTTGAGGTATGTATGTTGTGTGCTACAGATACTTGAAGTATG TTCTAGTACAGAAGAACGAGTACCTGGCAGTACATGGACAACGCCGTCAT GCAGGCATCACAATTTGCACATGAGTCTATGCCAAAGTACATGCTTTAGT ATGCATGGTATCCTGTTTGTGTTCTACACTTCATTGGACAACTTCATTAA GCAGTATGTCATGTGTTGTCGCCTGTGTGCTGCAAGTATCGCCACTTGCG GCTCATGGCAATTTATGTCGTGGTTACCGGAAACATCTCTGGGCTACATG TCTCCAGTTTCACTGTAAACACAAGAGGCTATCACTTGCTGAATATGTGT CCAGAGTCAGTACTCATTACTGGGATACTATTCGTTGCTTGCGTGAACCG CAACAACTGCTGCCCGTAGCTCATCTGGTGGCCACAGCAGTTTGACGTGA TAGCCTCTAGCAACATATTTGGTCTGCATTCGTCGCAGACATCTTTGGTC ATCTCTTTATGTGTAACACGCCAACATTACTGACTGACTGTTGTCAGCGT GTGCCGCAATCACTTTCCGTGTGCAGAGTACATAATCACACTGTACTGAC TAGCTGTTGCTTATGTGTGTCGCCATCACTGCTACTCCCAGCTCATCCGG TGGCCGGAGCAGTTTGACGTGATGTTCACTGGCTGCATCTTTCAACTTCC AACATCACCTTGTGTCATTTGCTTCATCTTCAAAACAACACTGTACTGAC CAACCACTCTGTCCTGCAATGACTGCTGCGCGCAGCTCATCCTGTGGCCG AAGCCGTTTGACGTCATGGTCACTGGCAACATCTCTACATCTCTAAACTA CCAACGCCACCATTCGTCACTTGCTGTATGTTCAAAACTACACTGTACTG ACCAACTTCTCTGTCCCGCAATAACTGCTGCCTGCAGCTTATCCGGTGGC CGAAGCAGTTTGACGTCATGGTCACGGGCAACATTTTTGGCGACATTCTC TCGGATGAGGCCTCCATGCTTGTGGGATCACTGGGCATGCTGCCCTCTGC CTCCGTCGGCAACCCATCCGGGCCCGGTGTGTTTGAGCCCTGCCATGGTT CCGCACCGGACATTGCTGGACAAGACAAGGTGAGATTTTTTGGCACTTTA GTGTTGCTGTGTGGTATTGCAAGTAAAATGCTTATTAATGTATGTATGTA TACTTCACCTTGCTCATTTACTTACGCGGCCTTTACTGTTTTGCTGTTCC CTACAGCCACCTCACCTGCTCCAGCGCAAAATGCAGCATCGAATCGCGTC TACCAACTGTCTACCACGATTACACCTTTGCGCTACTGATTGGTGGCTGC TGCTCTAACTTGTTCATGCTTGTCCACTTCTGTCCCCCTGTGTCCAGGCC AACCCCCTTGCCATGATCCTGTCAGCGGCAATGATGTTGCGCTATGACCT AGGCAGGCCAGAAGAGGCGGACTTGCTGGAGACGGCCGTTGACAACGTGC TGGACCAGGGGTGAGTCACCTCCAGTTGAAGTATGTTGGTGCGCATCTTG TACTTTGGTTTTGATCCACACTCGGCGTCACACTGTTACTCTCTGATGCA TCCGGTTGCGTATGGTGCCATTTTGATAATGCAGCATTCGTCCGCTTTGA TCATTCTTGAGCTGCATATCATTTTCCAAAGCTTTTTGGCTTTGAGCATC CCTCTGGAGCGTGCTGCGCATGATGAGCACTGCTGTGCATGATGAGCACA AGCGGTTAGCGTGAGTGTTTTCACTATTGGCTTAATTAGCAGCAGGCTTG CCTGCCACTGCTCATATGTGAAGAAGTGGTTTGCATGCCATGCGCACGCT CACATGTTGAGAACTTACCAGTACCGTGGAATTACTGCTGCAGCTTGAGC GAGGTTACGTGTTTCAACTGCAACTTTTGCTGCTTTCAGTTTTGCTTGAT AGGGAGCAGCGTGCTAGTTTCCTTGCCTTTGCCACTACCAAAGTAAGCAA AGCAAAAGCGTAGGTCCTTCTCTTGACGGCGCAACCTTCAATATGCGTAA ACTTGAATCATGCCATCATCAGCCGCTTGGCCAATCAGGTTGATTTATCG CATAAGCTGAGCATCGCCACACGCGTTCCCATTGCAGATACGCCACCGCC GACATCATGCGCGACGGCTGCAAGCCAGTGGGCTGCAAGGAGATGGGGCA GCGCGTTGCAGAGGCCCTGGAAAAGCTGCTCTAGAGTGACGCTCCGCCTT TGTAACTGCCACACGAGACAAGTTGCAGTGCTTGGATGGATCTGACATCA CGACGCCGTCTTTGTAACTGCCACATGGGACAGTTACACTGCTTGATGGA CGGGAGTCTGATGTCAAATCAGCGACCCCCAAAAATCAGATCGTTGAGCG CTGCTGCGTGCGCATCCGCTAAGCTTGGAAGCTACGTGAGTGCTGCAGTA GGGGCACTGCTGCAAGTATGCACACCGGAACGGGAATACACAGTGGAGCA GCTGCAATGCGCGCTTCCACAAATGAACATCACAGACCCTAATAGACACA TCCGTTGCATCATA
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Coding sequence (CDS) from alignment at Contig_101:303793..310456-

>mRNA_10808 ID=mRNA_10808|Name=jgi.p|Trimin1|351862|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1221bp|location=Sequence derived from alignment at Contig_101:303793..310456- (Tribonema minus UTEX_B_3156 )
ATGGGCAAGCGCTCGCTGGCGGTAGCGGCCGCAGGGGCGCTCTGCGCCGG
CTGCGCAGCCTTCATCACACCCAGCCTGCCCAGGGCAGCCCAGCGGGCGG
GATCCAGGGGCCTCCACATGGCGGTGACGAAGAAGGACTCGTACTCCATT
ACACTGCTGCCCGGCGATGGGATCGGGCCGGAAATCACAACAGCCACCGT
GGCTGCGATTCAGCCTTTCTCCAAGCTGTTCAAGATGGAATTTAAGGAAG
CACTGATTGGCGGCGCTGCTATTGACGCAACTGGCTCCCCGTTCCCAGAT
GCAACGTTTGAGCAGATCAAGGCATCTGACTCTGTTCTCCTCAGTGCTAT
TGGAGGGCCCAAGTGGGACGGCAATCCGCGGGAGCAGCGGCCGGAAACGG
GGCTACTGGCCATGCGCAAGGGGCTGGGGCTCTTTGCCAATCTGCGACCT
GCCAAGGTGGTGCGGCAGCTGCTTGACGCTTCCACCCTCAAACCTGAGAT
CGTGGATGGTGTGGACATAATGGTGGTACGCGAGCTCACCGGCGACGTGT
ACTTTGGTACCCCCAAGGGGATTGAGACGACGGAGTCTGGAGAGCGGTTT
GGCTACAACAACATGATATACTACGAACACGAGGTGGAGCGGATTGCGCG
CGTGGCATTTGACGTCGCACGCAAGCGCGGCAAGCGCGTGTGCAGCGTGG
ACAAGGCCAATGTGCTGGACGTGAGCCAGCTGTGGCGGGACGTGGTGATT
CGCATACAGAAGGACGAGTACCCGGACGTGGAGCTCACACACCAATATGT
GGACAACGCCGCCATGCAGCTTATCCGGTGGCCGAAGCAGTTTGACGTCA
TGGTCACGGGCAACATTTTTGGCGACATTCTCTCGGATGAGGCCTCCATG
CTTGTGGGATCACTGGGCATGCTGCCCTCTGCCTCCGTCGGCAACCCATC
CGGGCCCGGTGTGTTTGAGCCCTGCCATGGTTCCGCACCGGACATTGCTG
GACAAGACAAGGCCAACCCCCTTGCCATGATCCTGTCAGCGGCAATGATG
TTGCGCTATGACCTAGGCAGGCCAGAAGAGGCGGACTTGCTGGAGACGGC
CGTTGACAACGTGCTGGACCAGGGATACGCCACCGCCGACATCATGCGCG
ACGGCTGCAAGCCAGTGGGCTGCAAGGAGATGGGGCAGCGCGTTGCAGAG
GCCCTGGAAAAGCTGCTCTAG
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