mRNA_10808 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A835ZK29_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK29_9STRA) HSP 1 Score: 801 bits (2068), Expect = 9.860e-291 Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 1
Query: 10 MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 1227
MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL
Sbjct: 1 MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 406
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: D7G282_ECTSI (3-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G282_ECTSI) HSP 1 Score: 601 bits (1549), Expect = 1.980e-211 Identity = 300/379 (79.16%), Postives = 332/379 (87.60%), Query Frame = 1
Query: 91 RAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 1227
RA + S L M KDSY + LLPGDGIGPEIT ATV A++P LFK+ FKEALIGGAAIDA GSP+PD+T KASDS+LL+AIGGPKWDGNPRE RPETGLLAMR LGLFANLRPAKV+++L+DAS+LKPEIV+GVDIMVVRELTGDVYFGTPKGI+ SGER GYNNMIY+EHEVERIA+VA+DVA KRGKR+CSVDKANVLDVSQLWRDVVI++ +D YP+VELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+GNP GPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRP EAD++E AVD V+D+GYAT DI R+G VGCKEMG +V E L KL+
Sbjct: 32 RAFSPSTSHKLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTLALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSED-YPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATNDIQREGTTAVGCKEMGDKVKEELAKLV 409
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A7S0F2Y7_9CRYP (3-isopropylmalate dehydrogenase n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0F2Y7_9CRYP) HSP 1 Score: 535 bits (1379), Expect = 6.280e-186 Identity = 281/367 (76.57%), Postives = 304/367 (82.83%), Query Frame = 1
Query: 121 LHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEAL 1215
L MAV KKDSY +T LPGDGIGPEI ATV Q + FKMEFKEALIGGAA+DA PFPD T +Q+K+SDSVLL+AIGGPKWD NPR++RPETGLL MRK LGLFANLRPA V+ QL DASTLKPE+V GVDIMVVRELTGDVYFG PKGI TT+ GERFGYNNM Y E EV RIA+VAFD+ARKRGKRVCSVDKANVLDVSQLWRDVVI KD YPDVEL+H YVDNAAMQLIR PKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVG+PSGPGVFEP HGSAPDIAG DKANPLA ILSAAMM RYDL RP+ A +E AV+ VLD G T D+ G K VGCK+MG V + +
Sbjct: 47 LSMAVKKKDSYFVTTLPGDGIGPEIMAATVKVCQAVAAKQGFKMEFKEALIGGAALDACNDPFPDETLKQMKSSDSVLLAAIGGPKWDANPRDKRPETGLLKMRKSLGLFANLRPATVLPQLADASTLKPEVVSGVDIMVVRELTGDVYFGEPKGI-TTKDGERFGYNNMCYKESEVRRIAKVAFDIARKRGKRVCSVDKANVLDVSQLWRDVVIETHKD-YPDVELSHMYVDNAAMQLIRNPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVFEPIHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPDAAQAIEDAVNKVLDDGVRTGDL---GGK-VGCKQMGDEVCKRI 407
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A7S0Z0Z5_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0Z5_9CRYP) HSP 1 Score: 532 bits (1370), Expect = 5.330e-185 Identity = 273/371 (73.58%), Postives = 306/371 (82.48%), Query Frame = 1
Query: 103 RAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAE 1209
RA S + MAV KKD Y+IT LPGDGIGPEI + A +K F++E+KEALIGGAA+DA P PDAT +Q++ASDS LL+AIGGPKWD NPRE RPETGLL MRK LGLFANLRPA V+ QL+DASTLKPE++ GVDIMVVRELTGDVYFG PKGIE + GERFG+NNM Y E E+ RIA+VAFD+A KRGK+VCSVDKANVLDVSQLWRDVVI + YP+VELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVG+PSGPGV+EPCHGSAPDIAG DKANPLA ILSAAMM RYDL RPE AD LE AV+ LD G TAD+ + +GCK+MG+ VA+
Sbjct: 11 RAHSTSVSMAVKKKDKYTITTLPGDGIGPEIIAGAITACDAVAKKQGFEIEWKEALIGGAALDAHNDPCPDATLDQMRASDSCLLAAIGGPKWDKNPRELRPETGLLKMRKELGLFANLRPATVLDQLVDASTLKPEVIKGVDIMVVRELTGDVYFGAPKGIEERD-GERFGFNNMCYKESEIRRIAKVAFDLAMKRGKKVCSVDKANVLDVSQLWRDVVIE-EAAAYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVYEPCHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPEAADALEAAVNKALDDGLRTADLATENT--IGCKQMGEEVAK 377
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A6S8RM19_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8RM19_9STRA) HSP 1 Score: 532 bits (1371), Expect = 1.320e-184 Identity = 289/409 (70.66%), Postives = 320/409 (78.24%), Query Frame = 1
Query: 10 MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMR--DGCKPVGCKEMGQRVAEALEKL 1224
M R +AVAA G ++ TP+ P A QR L+MAV K DSYSITLLPGDGIGPEITTAT + K F ME KEALIGG AID PFP+ T +Q SDSVLL+ IGG KWD NPRE RPETGLL MRK +GLFANLRPAKV+ QLLDASTLK E+V+GVD+MVVRELTGDVYFGTPKGIE + G+R G+NNMIY E+E+ RIARVA DVA KRG ++CSVDKANVLDVSQLWR+V E+PDVEL+H YVDNAAMQLIRWPKQFD MVTGNIFGDILSDEASMLVGSLGMLPSAS+G SGPGVFEP HGSAPDIAG+DKANPLAMILSAAMML YDL RPEEA LLE AV+ LDQG TADI + DGCK VGCKEMG VA+ + K+
Sbjct: 5 MSYRCMAVAAL----LGASSAFTPA-PTAFQRTQRTSLNMAVPKSDSYSITLLPGDGIGPEITTATKEVLGALCKRCGFTMEMKEALIGGCAIDEKNDPFPEETLKQCLESDSVLLACIGGYKWDSNPRELRPETGLLKMRKEMGLFANLRPAKVIPQLLDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIEERD-GQRVGFNNMIYGENEIVRIARVAGDVASKRGGKLCSVDKANVLDVSQLWREVTTDTITKEFPDVELSHMYVDNAAMQLIRWPKQFDTMVTGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPIHGSAPDIAGEDKANPLAMILSAAMMLTYDLERPEEAALLEAAVEAALDQGLRTADIKQEGDGCKLVGCKEMGSVVADLVSKI 406
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A7S2UN91_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UN91_9STRA) HSP 1 Score: 532 bits (1370), Expect = 1.680e-184 Identity = 279/384 (72.66%), Postives = 313/384 (81.51%), Query Frame = 1
Query: 85 LPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIM--RDGCKPVGCKEMGQRVAEALEKL 1224
+P A +R GS AV+KKDSYS+TLLPGDGIGPEIT AT + K F +E KEALIGGAAIDA G PFP + +Q +ASDSVLL+ IGG KWD NPRE RPE+GLL MRK +GLFANLRPAKV+ QL+DASTLK E+V+GVD+MVVRELTGDVYFGTPKGI+ + GER GYNNMIY E E+ RIARVA DVA KR ++CSVDKANVLDVSQLWRDVVI + + E+PDVEL+H YVDNAAMQLIR P QFD +VTGNIFGDILSDEASMLVGSLGMLPSAS+G SGPGVFEPCHGSAPDIAGQ+ +NPLAMILSAAMMLRYDL RP+EADLLE AV+ LDQG TADI DGCK VGC EMGQ VAE + K+
Sbjct: 22 VPSAGRRFGSSSAVSAVSKKDSYSVTLLPGDGIGPEITEATKVVLTALCKKTGFTIELKEALIGGAAIDAVGDPFPQESLDQCRASDSVLLACIGGYKWDSNPRELRPESGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIDVID-GERVGYNNMIYKESEIRRIARVAGDVASKRTGKLCSVDKANVLDVSQLWRDVVIEVCEKEFPDVELSHMYVDNAAMQLIRRPLQFDTIVTGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGQNMSNPLAMILSAAMMLRYDLERPDEADLLEKAVEAALDQGLRTADIKLESDGCKLVGCTEMGQAVAEFVTKI 403
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: K0TLJ0_THAOC (3-isopropylmalate dehydrogenase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLJ0_THAOC) HSP 1 Score: 531 bits (1369), Expect = 1.990e-184 Identity = 277/385 (71.95%), Postives = 312/385 (81.04%), Query Frame = 1
Query: 79 PSLP--RAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMR--DGCKPVGCKEMGQRVAEAL 1215
PS P R A R G AV++KDSY ITLLPGDGIGPEI + + + F++ +EALIGGAAIDA PFPDAT E +++DSVLLS IGG KWDGNPRE RPETGLL MRK +GLFANLRPAKV+ QL+DASTLK E+V+GVD+MVVRELTGDVYFG PKGI+T G+R GYNNMIY E E+ERIARVA DVA KR ++CSVDKANVLDVSQLWRDVV + DE+PDV+L+H YVDNAAMQLIRWPKQFD MVTGNIFGDILSDEASMLVGSLGMLPSAS+G SGPGVFEPCHGSAPDIAG+DKANPLA+ILSAAMMLRYDL R EEAD+LE AV+ VLDQG TADI + DGCK VGC EMG+ VA+ +
Sbjct: 21 PSAPGGRPAARLG------AVSRKDSYDITLLPGDGIGPEIMESAKSVLSALCDRCGFELNLREALIGGAAIDAVNDPFPDATLEACQSADSVLLSCIGGYKWDGNPRELRPETGLLKMRKSMGLFANLRPAKVLDQLIDASTLKREVVEGVDVMVVRELTGDVYFGAPKGIDTDADGKRVGYNNMIYSEGEIERIARVAGDVASKRNGKLCSVDKANVLDVSQLWRDVVTDVITDEFPDVDLSHMYVDNAAMQLIRWPKQFDTMVTGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGEDKANPLALILSAAMMLRYDLARGEEADILEAAVETVLDQGLRTADIKQEDDGCKLVGCIEMGKAVADVV 398
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A6V1T6U9_HETAK (3-isopropylmalate dehydrogenase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T6U9_HETAK) HSP 1 Score: 531 bits (1368), Expect = 2.630e-184 Identity = 276/374 (73.80%), Postives = 306/374 (81.82%), Query Frame = 1
Query: 109 GSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL-FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 1227
GS MAV KKDSY ITLL GDGIGPEIT ATVAA+ P KL FKM FKEALIGGAA+DA PFPD + EQ K SDSVLLS IGG KWD NPRE RPETGLL MRK +GLFANLRPAKV+ QL+ ASTLK E+++GVDIMVVRELTGDVYFGTPKG ET + G+R YNNMIY E E+ RIA+VAFDVA KRGK V S+DKANVLDVSQLWRDVVI K+ YP+VEL H Y+DNAAMQLIRWPKQFD +V GN+FGDI+SDEASMLVGSLGMLPSAS+G+PSGPGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL R EEA +LE AV+ VLD T DI G VGCK+MG+ VA+ + L+
Sbjct: 28 GSARTFMAVEKKDSYDITLLTGDGIGPEITQATVAALAPLEKLGFKMNFKEALIGGAALDAVNHPFPDESLEQCKGSDSVLLSCIGGYKWDKNPRELRPETGLLRMRKEMGLFANLRPAKVIPQLMGASTLKEEVLEGVDIMVVRELTGDVYFGTPKGTETRD-GKRVAYNNMIYDEEEIRRIAKVAFDVAMKRGKNVYSIDKANVLDVSQLWRDVVIEESKN-YPEVELNHMYIDNAAMQLIRWPKQFDTIVCGNLFGDIISDEASMLVGSLGMLPSASIGDPSGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSRAEEAQMLEDAVEQVLDI-CRTVDIAGGGLPTVGCKQMGEEVAKLVAALV 398
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A1Z5JD77_FISSO (3-isopropylmalate dehydrogenase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JD77_FISSO) HSP 1 Score: 525 bits (1353), Expect = 6.160e-182 Identity = 281/406 (69.21%), Postives = 324/406 (79.80%), Query Frame = 1
Query: 19 RSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRD--GCKPVGCKEMGQRVAEALEKL 1224
R LA A L + AAF+ PS+ R++ + G AV KKDSY++TLLPGDGIGPEIT AT +Q + F++E+KEALIGGAAIDA PFP + EQ ASDSVLL+ IGG KWD NPRE RPETGLL MRK +GLFANLRPAKV+ QL+DASTLK E+V+GVD+MVVRELTGDVYFGTPKGI+ +G+R GYNNMIY E E++RIARVA DVA KRG ++CSVDKANVLDVSQLWRDVV + ++P+VEL+H YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G SGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMML+YDL RPEEA LLE AV+ LD G T D+ +D GCK VGC EMGQ VA+ + ++
Sbjct: 5 RFLAFLTASLLASPGAAFV-PSVQRSSSASSLLG---AVAKKDSYAVTLLPGDGIGPEITAATKQVLQALATRCNFRIEWKEALIGGAAIDAKNDPFPQESLEQCLASDSVLLACIGGYKWDKNPRELRPETGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIDMV-NGQRVGYNNMIYSESEIDRIARVAGDVASKRGGKLCSVDKANVLDVSQLWRDVVTDVITKDFPEVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLQYDLDRPEEAALLEKAVEAALDAGVRTPDLKQDNDGCKLVGCAEMGQVVAKLVAEI 404
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Match: A0A7S0N7T0_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N7T0_9CRYP) HSP 1 Score: 524 bits (1349), Expect = 8.510e-182 Identity = 272/369 (73.71%), Postives = 304/369 (82.38%), Query Frame = 1
Query: 109 GSRGLHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKL--FKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAE 1209
G MAV++KDSY +TLLPGDGIGPEI A V A + + F + FKEALIGGAA+DA P PD T +Q+KASDSVLL+AIGGPKWD NPRE RPETGLL MRK LGLFANLRPA V+ QL+DASTLKPE+V GVDIMVVRELTGDVYFG PKGI TT+ GERFG+NNM Y E EV RIA+VAFD+A KRG +VCSVDKANVLDVSQLWRDVVI + +YP VEL+H YVDNAAMQLIR PKQFDV+VTGNIFGDILSDEASMLVGSLGMLPSASVG+ SGPGVFEPCHGSAPDIAGQDKANPLA ILSAAMM RYDL RPE A+ LE AV+ VLD G TAD+ R+ +GC++MG+ VA+
Sbjct: 14 GLTSSRMAVSRKDSYDVTLLPGDGIGPEIIKAAVVACKAVAAKQGFTINFKEALIGGAALDAHNDPLPDVTLKQMKASDSVLLAAIGGPKWDKNPRELRPETGLLRMRKALGLFANLRPATVLPQLIDASTLKPEVVAGVDIMVVRELTGDVYFGEPKGI-TTKDGERFGFNNMCYKESEVRRIAKVAFDIASKRGNKVCSVDKANVLDVSQLWRDVVIE-EHAKYPKVELSHMYVDNAAMQLIRNPKQFDVIVTGNIFGDILSDEASMLVGSLGMLPSASVGDRSGPGVFEPCHGSAPDIAGQDKANPLATILSAAMMFRYDLDRPEAAEALERAVNKVLDDGLRTADLARENT--IGCRQMGEEVAK 378 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351862 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10808 ID=mRNA_10808|Name=jgi.p|Trimin1|351862|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1560bp|location=Sequence derived from alignment at Contig_101:303793..310456- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATTGGTATCATGGGCAAGCGCTCGCTGGCGGTAGCGGCCGCAGGGGCGCTback to top protein sequence of jgi.p|Trimin1|351862 >Trimin1|351862|estExt_Genemark1.C_Ctg_1010039 ID=Trimin1|351862|estExt_Genemark1.C_Ctg_1010039|Name=jgi.p|Trimin1|351862|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=407bp MGKRSLAVAAAGALCAGCAAFITPSLPRAAQRAGSRGLHMAVTKKDSYSIback to top mRNA from alignment at Contig_101:303793..310456- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10808 ID=mRNA_10808|Name=jgi.p|Trimin1|351862|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6664bp|location=Sequence derived from alignment at Contig_101:303793..310456- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_101:303793..310456- >mRNA_10808 ID=mRNA_10808|Name=jgi.p|Trimin1|351862|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1221bp|location=Sequence derived from alignment at Contig_101:303793..310456- (Tribonema minus UTEX_B_3156 )back to top |