mRNA_16441 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353936
Unique Name	mRNA_16441
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353936 vs. uniprot
Match: A0A836CID0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CID0_9STRA)

HSP 1 Score: 1829 bits (4737), Expect = 0.000e+0
Identity = 1100/1100 (100.00%), Postives = 1100/1100 (100.00%), Query Frame = 1

Query:    1 MKAKANRPPRRRTLDPSFGARCDTGGSGGHSGAWGWRWWQHSHPVRPPPSVPTTKAYGSSGAKGGTGPARGSCGGGYWRSGGGSGCSSSHNSVVSPASDTRSCAATGPHTSSTQMSAEDDELDDSAGAHPYGGDGGSSDSTDWHQCSGGSSAAELVELTTASAAHDVASTAHGGDGRQACSMGICCSSSSSNGSHTEGAFVIVARHTASKPDVLDLDDGNLETLLDTYPYLALAVLDDSPRSLALAAVWEQASAALLRAHGGGSXXXXXXXXXXXXXXXXXXXXXXXDADAAAQFARVVLPQQPGVHEWLAMYEGVPKQTRRERARCRDGRARRTHGALLPCHRAQAGAAAAPAAVVIRHGAVYEYGGSLDAPQRAAAYVLEDSQPVVARVRSVRGVGLLLRQGTVAVRSDADGHRWRTAAAPAPSRVVLGLFPEGAADGGCADAYAADGAAPLLSTAWQHFCAVAEALRGSGGDGAAAFSXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGHSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXGMAFAVTTDARLFDAVAGAGDTLAAARAEAAWRDAAXXXXXXDGGGVQEMGGAFTDAPALVLLEPTAPILSGDAAAHYSTHTYTGPLARRPLLDWVLATAPPPLTRLVGGPRAGPARVLLTARWLAARSGXXXXXXXXXVPALRVIAFTRGDAAEVAELAAAACALRGAAAFGYVVGGSFEEASAAAACPQQRIASLTKTAQLKLQCAAASPWLPAGVADAAAARAYGVDTTARRRAAAAIVAHDRESGLRYHMPAPPPSAPVTAVXXXTATDVMEWAAAVLSGAVRPTPRSEPLPPPRAGGGGLQGQGKGEGGDVARLVGLSFAAEVARAGRDALVAVVSPRCAASRALRVELAVLAHALASESRVLIAYVDGTANDLPASVRVDAYPAVLWFPARGKPYADASLPEPAPYWEDALGFEDMLGFIVQDASRVFXXXXXXXXXQSSFDRATLAVPDWQGMDALYAARDELLAAAETQAHWELRNARRAHYTSPRLDWAFGEVVFDGRRWHIAAAFAAPLAMLAAQXXXXXXXXXXXXLLQAETPRAGAASPGSPSSPQ 3300
            MKAKANRPPRRRTLDPSFGARCDTGGSGGHSGAWGWRWWQHSHPVRPPPSVPTTKAYGSSGAKGGTGPARGSCGGGYWRSGGGSGCSSSHNSVVSPASDTRSCAATGPHTSSTQMSAEDDELDDSAGAHPYGGDGGSSDSTDWHQCSGGSSAAELVELTTASAAHDVASTAHGGDGRQACSMGICCSSSSSNGSHTEGAFVIVARHTASKPDVLDLDDGNLETLLDTYPYLALAVLDDSPRSLALAAVWEQASAALLRAHGGGSXXXXXXXXXXXXXXXXXXXXXXXDADAAAQFARVVLPQQPGVHEWLAMYEGVPKQTRRERARCRDGRARRTHGALLPCHRAQAGAAAAPAAVVIRHGAVYEYGGSLDAPQRAAAYVLEDSQPVVARVRSVRGVGLLLRQGTVAVRSDADGHRWRTAAAPAPSRVVLGLFPEGAADGGCADAYAADGAAPLLSTAWQHFCAVAEALRGSGGDGAAAFSXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGHSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXGMAFAVTTDARLFDAVAGAGDTLAAARAEAAWRDAAXXXXXXDGGGVQEMGGAFTDAPALVLLEPTAPILSGDAAAHYSTHTYTGPLARRPLLDWVLATAPPPLTRLVGGPRAGPARVLLTARWLAARSGXXXXXXXXXVPALRVIAFTRGDAAEVAELAAAACALRGAAAFGYVVGGSFEEASAAAACPQQRIASLTKTAQLKLQCAAASPWLPAGVADAAAARAYGVDTTARRRAAAAIVAHDRESGLRYHMPAPPPSAPVTAVXXXTATDVMEWAAAVLSGAVRPTPRSEPLPPPRAGGGGLQGQGKGEGGDVARLVGLSFAAEVARAGRDALVAVVSPRCAASRALRVELAVLAHALASESRVLIAYVDGTANDLPASVRVDAYPAVLWFPARGKPYADASLPEPAPYWEDALGFEDMLGFIVQDASRVFXXXXXXXXXQSSFDRATLAVPDWQGMDALYAARDELLAAAETQAHWELRNARRAHYTSPRLDWAFGEVVFDGRRWHIAAAFAAPLAMLAAQXXXXXXXXXXXXLLQAETPRAGAASPGSPSSPQ
Sbjct:    1 MKAKANRPPRRRTLDPSFGARCDTGGSGGHSGAWGWRWWQHSHPVRPPPSVPTTKAYGSSGAKGGTGPARGSCGGGYWRSGGGSGCSSSHNSVVSPASDTRSCAATGPHTSSTQMSAEDDELDDSAGAHPYGGDGGSSDSTDWHQCSGGSSAAELVELTTASAAHDVASTAHGGDGRQACSMGICCSSSSSNGSHTEGAFVIVARHTASKPDVLDLDDGNLETLLDTYPYLALAVLDDSPRSLALAAVWEQASAALLRAHGGGSXXXXXXXXXXXXXXXXXXXXXXXDADAAAQFARVVLPQQPGVHEWLAMYEGVPKQTRRERARCRDGRARRTHGALLPCHRAQAGAAAAPAAVVIRHGAVYEYGGSLDAPQRAAAYVLEDSQPVVARVRSVRGVGLLLRQGTVAVRSDADGHRWRTAAAPAPSRVVLGLFPEGAADGGCADAYAADGAAPLLSTAWQHFCAVAEALRGSGGDGAAAFSXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGHSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXGMAFAVTTDARLFDAVAGAGDTLAAARAEAAWRDAAXXXXXXDGGGVQEMGGAFTDAPALVLLEPTAPILSGDAAAHYSTHTYTGPLARRPLLDWVLATAPPPLTRLVGGPRAGPARVLLTARWLAARSGXXXXXXXXXVPALRVIAFTRGDAAEVAELAAAACALRGAAAFGYVVGGSFEEASAAAACPQQRIASLTKTAQLKLQCAAASPWLPAGVADAAAARAYGVDTTARRRAAAAIVAHDRESGLRYHMPAPPPSAPVTAVXXXTATDVMEWAAAVLSGAVRPTPRSEPLPPPRAGGGGLQGQGKGEGGDVARLVGLSFAAEVARAGRDALVAVVSPRCAASRALRVELAVLAHALASESRVLIAYVDGTANDLPASVRVDAYPAVLWFPARGKPYADASLPEPAPYWEDALGFEDMLGFIVQDASRVFXXXXXXXXXQSSFDRATLAVPDWQGMDALYAARDELLAAAETQAHWELRNARRAHYTSPRLDWAFGEVVFDGRRWHIAAAFAAPLAMLAAQXXXXXXXXXXXXLLQAETPRAGAASPGSPSSPQ 1100

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BLAST of jgi.p|Trimin1|353936 vs. uniprot
Match: A0A482SI19_9ARCH (Thioredoxin domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SI19_9ARCH)

HSP 1 Score: 139 bits (350), Expect = 1.460e-31
Identity = 84/241 (34.85%), Postives = 125/241 (51.87%), Query Frame = 1

Query: 2446 VMEWAAAVLSGAVRPTPRSEPLPPPRAGGGGLQGQGKGEGGDVARLVGLSFAAEVARAGRDALVAVVSPRCAASRALRVELAVLAHALASESRVLIAYVDGTANDLPASVRVDAYPAVLWFPARGKPYADASLPEPAPYWEDALGFEDMLGFIVQDASRVFXXXXXXXXXQSSFDRATLAVPDWQGMDALYAARDELLAAAETQAHWELRNARRAHYTSPRLDWAFGEVVFDGRRWHIAAA 3168
            + ++   VL+G V    +SEPLP             K + G   R+VG +    V++   D L+A+  P CA  + L     +L  A+ SESR+LIA +D +ANDLP++  V  YP +LWFPAR KPY ++++P P  YW+     +++ GF+ +D               SSFD  +L +   + + +L    D   A  E +   + RN  R  Y  P +DW  GEVVFDG+RWH+ AA
Sbjct:  172 LQDFVVGVLTGLVPKVLKSEPLP-------------KKQSGVAQRVVGSNVLDVVSKIDTDVLLAITVPGCAHCKRLLPAYELLGRAVQSESRILIARIDASANDLPSTWGVSDYPTLLWFPARDKPYKESTVPTPRQYWDAGFSLQELAGFVQRD---------------SSFDPKSLRIATAEQLSSLQGDEDIYRAKFEEEERVQRRNEGRIVYEVPFVDWLLGEVVFDGKRWHLGAA 384

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BLAST of jgi.p|Trimin1|353936 vs. uniprot
Match: A0A7S3XLQ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLQ2_HETAK)

HSP 1 Score: 122 bits (307), Expect = 1.630e-26
Identity = 93/282 (32.98%), Postives = 131/282 (46.45%), Query Frame = 1

Query: 2344 AIVAHDRESGLRYHMPAPPPSAPVTAVXXXTATDVMEWAAAVLSGAVRPTPRSEPLPPPRAGGGGLQGQGKGEGGDVARLVGLSFAAEVARAGRDALVAVVSPRCAASRALRVELAVLAHALASESRVLIAYVDGTANDLPASVRVDAYPAVLWFPARGKPYADASLPEPAPYW-EDALGFEDMLGFIVQDASRVFXXXXXXXXXQSSFDRATLAVPDWQGMDALYAARDELLAAAETQAHWELRNARRAHYTSPRLDWAFGEVVFDGRRWHIAAAFAAPLA 3186
            A++AHD     R+         P T        ++M + + VL G ++P+ +SEP+P             K   G V +LVG +F  EV++ G D LV V +P CA S AL     +L  AL  E RV++A +DG ANDLP  + V AYP +LWFPA  KPY     P+P     E     +++L F+ ++AS                     A P+   +D L      L   A  +A W LRN  R  +    +D+  G+VVFDG RW I    A  L+
Sbjct:   77 ALIAHDPAQDTRF---------PSTYEEPLEYDNIMSFMSDVLEGRLKPSFKSEPVP-------------KKNDGPVKKLVGSTFVEEVSKEGVDVLVKVYAPWCAHSAALAPAYELLGRALGGEPRVVVAEIDGAANDLPPHLDVQAYPDLLWFPAADKPYPGKGAPQPRALGREPGRSLQELLAFVRREAS-------------PGGPPLRAATPEQ--LDTLAQEAPALEEQALRRARWALRNKDRVVFEPALVDYLVGDVVFDGCRWMIGLVVALVLS 321

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BLAST of jgi.p|Trimin1|353936 vs. uniprot
Match: A0A7S3GYC8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GYC8_9STRA)

HSP 1 Score: 102 bits (254), Expect = 8.450e-21
Identity = 75/241 (31.12%), Postives = 113/241 (46.89%), Query Frame = 1

Query: 2461 AAVLSGAVRPTPRSEPLPPPRAGGGGLQGQGKGEGGDVARLVGLSFAAEVARAGRDALVAVVSPRCAASRALRVELAVLAHALASESRVLIAYVDGTANDLPASVRVDAYPAVLWFPARGKPYA--DASLPEPAPYWEDALGFEDMLGFIVQDASRVFXXXXXXXXXQSSFDRATLAVPDWQGMDALYAARDELLAAAETQAHWELRNARRAHYT-SPRLDWAFGEVVFDGRRWHIAAAFA 3174
            A V++G V    ++EP+P P                 V   VG +    V + G+D L+ V +P C   + L     +LA A+ +E R++IA ++G  ND+P+S  V AYP +LWF A  K     D S   P  YW+      ++  F+ ++ S               FD  +L V   + + +L  A + L    E +   ++RN  R  Y  SP LD+  GEVVFDG+RWH+A   A
Sbjct:    1 AGVITGVVPKVVKTEPVPKP-------------SNNLVVTAVGSNVMDIVNQPGKDVLLVVFAPWCTHCKKLLPTYEILARAVQNEPRIVIAKINGETNDIPSSWGVKAYPTLLWFRASDKEAVKGDFSALLPRDYWDAGYSLHELASFVQREGS---------------FDLKSLRVASNEQLASLQGAEEALRVQYEIEERHQMRNMGRVVYEDSPLLDYFLGEVVFDGKRWHVAMTAA 213

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353936 vs. uniprot

BLAST of jgi.p|Trimin1|353936 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A836CID0_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A482SI19_9ARCH	1.460e-31	34.85	Thioredoxin domain-containing protein n=1 Tax=arch...	[more]
A0A7S3XLQ2_HETAK	1.630e-26	32.98	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S3GYC8_9STRA	8.450e-21	31.12	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_197	contig	Contig_197:214515..224028 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353936\|estExt_Genemark1.C_Ctg_1970023
BRITE	ko00000,ko00001,ko01000,ko03110,ko04131,ko04147
KEGG Pathway	ko04141,map04141
KEGG ko	ko:K01829,ko:K09580,ko:K09584
EC	5.3.4.1
GOs	GO:0000003,GO:0001666,GO:0003674,GO:0003756,GO:0003824,GO:0004656,GO:0005102,GO:0005178,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005793,GO:0005886,GO:0006082,GO:0006457,GO:0006464,GO:0006508,GO:0006511,GO:0006516,GO:0006517,GO:0006520,GO:0006575,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009100,GO:0009628,GO:0009897,GO:0009966,GO:0009986,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010646,GO:0010941,GO:0012505,GO:0015035,GO:0015036,GO:0015037,GO:0016020,GO:0016043,GO:0016222,GO:0016491,GO:0016667,GO:0016671,GO:0016705,GO:0016706,GO:0016853,GO:0016860,GO:0016864,GO:0018126,GO:0018193,GO:0018208,GO:0018401,GO:0019153,GO:0019221,GO:0019471,GO:0019511,GO:0019538,GO:0019752,GO:0019798,GO:0019941,GO:0019953,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0030163,GO:0030433,GO:0031543,GO:0031545,GO:0031974,GO:0032501,GO:0032991,GO:0033554,GO:0034097,GO:0034377,GO:0034378,GO:0034379,GO:0034975,GO:0034976,GO:0035722,GO:0035977,GO:0036211,GO:0036293,GO:0036294,GO:0036503,GO:0036507,GO:0036508,GO:0038155,GO:0042221,GO:0042981,GO:0043062,GO:0043067,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043632,GO:0043687,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0044877,GO:0046596,GO:0046598,GO:0046982,GO:0046983,GO:0048518,GO:0048524,GO:0048583,GO:0050789,GO:0050792,GO:0050794,GO:0050839,GO:0050896,GO:0051082,GO:0051213,GO:0051603,GO:0051704,GO:0051716,GO:0055114,GO:0065003,GO:0065005,GO:0065007,GO:0070013,GO:0070482,GO:0070671,GO:0070887,GO:0071310,GO:0071345,GO:0071349,GO:0071453,GO:0071456,GO:0071704,GO:0071825,GO:0071827,GO:0071840,GO:0071944,GO:0080134,GO:0080135,GO:0097006,GO:0097466,GO:0098552,GO:0140096,GO:1900407,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901698,GO:1901700,GO:1902175,GO:1902494,GO:1902531,GO:1902882,GO:1903201,GO:1903900,GO:1903902,GO:1904382,GO:1904587,GO:1990204,GO:2001233,GO:2001242
Preferred name	PDI1
Description	intramolecular oxidoreductase activity, transposing S-S bonds
COG category	CO
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG0526@1\|root,KOG0190@2759\|Eukaryota
Evalue	5.1e-06
Seed ortholog	529818.AMSG_05621T0
Hectar predicted targeting category	other localisation
TranscriptId	354258
Track	FilteredModels1
ProteinId	353936

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353936	gene_16441	Tribonema minus UTEX_B_3156	gene	Contig_197 214515..224028 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353936	Trimin1\|353936\|estExt_Genemark1.C_Ctg_1970023	Tribonema minus UTEX_B_3156	polypeptide	Contig_197 214685..224028 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16441_14	exon_16441_14	Tribonema minus UTEX_B_3156	exon	Contig_197 214515..214930 -
exon_16441_13	exon_16441_13	Tribonema minus UTEX_B_3156	exon	Contig_197 215800..215901 -
exon_16441_12	exon_16441_12	Tribonema minus UTEX_B_3156	exon	Contig_197 216793..216837 -
exon_16441_11	exon_16441_11	Tribonema minus UTEX_B_3156	exon	Contig_197 216938..217178 -
exon_16441_10	exon_16441_10	Tribonema minus UTEX_B_3156	exon	Contig_197 217541..217917 -
exon_16441_9	exon_16441_9	Tribonema minus UTEX_B_3156	exon	Contig_197 218170..218265 -
exon_16441_8	exon_16441_8	Tribonema minus UTEX_B_3156	exon	Contig_197 218842..219219 -
exon_16441_7	exon_16441_7	Tribonema minus UTEX_B_3156	exon	Contig_197 219813..220420 -
exon_16441_6	exon_16441_6	Tribonema minus UTEX_B_3156	exon	Contig_197 221146..221311 -
exon_16441_5	exon_16441_5	Tribonema minus UTEX_B_3156	exon	Contig_197 221508..221609 -
exon_16441_4	exon_16441_4	Tribonema minus UTEX_B_3156	exon	Contig_197 221726..222037 -
exon_16441_3	exon_16441_3	Tribonema minus UTEX_B_3156	exon	Contig_197 223237..223245 -
exon_16441_2	exon_16441_2	Tribonema minus UTEX_B_3156	exon	Contig_197 223352..223380 -
exon_16441_1	exon_16441_1	Tribonema minus UTEX_B_3156	exon	Contig_197 223437..224028 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_16441	UTR3_16441	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_197 214515..214684 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16441	CDS_16441	Tribonema minus UTEX_B_3156	CDS	Contig_197 223437..224028 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_197:214515..224028-
coding sequence from alignment at Contig_197:214515..224028-

spliced messenger RNA

>mRNA_16441 ID=mRNA_16441|Name=jgi.p|Trimin1|353936|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3473bp|location=Sequence derived from alignment at Contig_197:214515..224028- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAAAGCGAAGGCGAACAGACCGCCGCGGCGCCGGACCCTTGACCCGTC
GTTCGGCGCACGCTGTGATACGGGGGGCAGCGGGGGGCACAGCGGCGCGT
GGGGGTGGCGGTGGTGGCAGCACAGCCACCCAGTGCGGCCGCCGCCTTCA
GTGCCAACCACAAAGGCTTACGGCAGCAGCGGCGCTAAGGGCGGCACTGG
CCCGGCCCGCGGCAGCTGCGGCGGCGGCTACTGGCGCAGCGGCGGCGGCA
GCGGCTGCAGCAGCAGCCACAACTCAGTGGTCAGCCCTGCCAGCGATACG
CGCTCGTGTGCGGCGACAGGACCGCACACGTCATCTACGCAGATGAGCGC
GGAGGACGACGAGCTGGATGACTCCGCAGGCGCGCACCCGTACGGGGGAG
ACGGCGGCAGCAGCGACAGCACGGACTGGCATCAATGTTCAGGCGGCAGC
AGCGCTGCCGAGTTGGTGGAGCTGACCACCGCGTCGGCGGCGCATGACGT
GGCGAGCACCGCTCACGGCGGCGACGGCCGCCAGGCCTGCAGCATGGGGA
TTTGCTGCAGCAGCAGCAGCAGCAACGGCTCGCACACCGAGGGCGCGTTC
GTTATCGTGGCCCGGCACACTGCCTCCAAGCCCGACGTGCTGGACCTCGA
CGACGGCAACCTTGAGACGCTGCTGGATACCTACCCCTACCTGGCGCTGG
CAGTGCTCGACGACTCGCCGCGCAGCCTCGCGCTCGCCGCCGTCTGGGAG
CAGGCCAGCGCGGCGCTGCTGCGCGCACACGGCGGCGGCAGCGGCGGCGG
CGGCGGTCGTGGCGGCGGCGGCAGCGGCGGCGGCGGCGGCGTCGGCGGCG
GCGACGGAGGCGATGCGGACGCGGCGGCGCAGTTCGCGCGGGTGGTGCTG
CCGCAGCAGCCGGGCGTGCACGAGTGGCTGGCCATGTACGAGGGCGTCCC
GAAGCAGACGCGCCGCGAGCGGGCGCGCTGCCGCGACGGACGCGCGCGCC
GCACGCACGGAGCGCTGCTGCCGTGTCATCGCGCGCAGGCCGGCGCGGCG
GCGGCGCCGGCCGCGGTGGTCATCAGGCACGGCGCCGTGTACGAGTACGG
AGGCTCGCTGGACGCACCGCAACGCGCCGCCGCGTACGTCCTGGAGGACA
GCCAGCCCGTAGTGGCGCGCGTGCGCAGCGTGCGCGGCGTCGGCCTGCTG
CTGCGGCAAGGTACTGTCGCCGTGCGCAGCGACGCTGACGGGCACCGTTG
GCGCACGGCGGCGGCCCCGGCGCCCAGCAGGGTCGTCCTGGGACTGTTCC
CGGAAGGCGCCGCGGACGGCGGCTGTGCGGACGCGTACGCCGCTGACGGC
GCCGCGCCCCTGCTGAGCACTGCCTGGCAGCACTTCTGCGCCGTCGCCGA
GGCGTTGCGCGGCAGCGGCGGCGACGGCGCTGCCGCCTTTAGCAGCGGCA
GTGCAGGTGGCGGCGGCGGCGATGGTGGCGGCGGCGGCGGCAGCAGCGGC
AGTGGTGCCAGGGCCGGCGGCAACGGTGATGGCCACAGCAGTGATGACGG
CGGCAGCAGCGGCGGCGGCGGCAGCGGCGGCAGCAGCGGCTGCAGCGGCG
GCAGCGGCTGCAGCGGCGGCAGCGGCGGCATGGCGTTTGCGGTCACGACG
GACGCGCGCCTCTTTGACGCGGTTGCGGGAGCGGGCGATACGCTGGCGGC
GGCGAGGGCGGAGGCGGCGTGGCGCGATGCAGCAGCAGCGGCAGCAGCGG
GAGATGGGGGCGGAGTGCAGGAGATGGGCGGCGCGTTCACTGACGCTCCC
GCTTTGGTGCTTCTCGAGCCCACAGCCCCAATCCTCAGCGGCGACGCCGC
CGCGCACTACTCAACGCACACCTACACGGGCCCCCTGGCGCGCCGCCCCC
TGCTAGACTGGGTCCTAGCAACGGCGCCGCCGCCGCTGACCCGACTCGTC
GGGGGCCCCCGCGCGGGGCCCGCTCGCGTGCTGCTCACGGCGCGCTGGCT
CGCTGCTCGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTGCCGG
CGCTGCGCGTGATCGCCTTCACGCGTGGCGACGCGGCGGAGGTGGCGGAG
CTGGCGGCGGCGGCGTGCGCGCTGCGCGGCGCGGCGGCGTTCGGCTACGT
CGTGGGCGGCAGCTTCGAGGAGGCGAGTGCTGCAGCGGCATGCCCTCAGC
AGCGCATCGCTTCGCTCACCAAGACGGCTCAGTTGAAGTTGCAGTGCGCG
GCGGCGTCCCCCTGGCTGCCGGCTGGTGTGGCGGACGCTGCCGCGGCGCG
CGCCTACGGCGTCGACACCACGGCGCGGCGCCGCGCCGCCGCCGCCATCG
TCGCACACGACCGCGAATCAGGCCTGCGCTACCACATGCCCGCGCCGCCG
CCGTCAGCGCCCGTAACTGCCGTAACTGCCGTAACCGCCACCGACGTCAT
GGAGTGGGCGGCGGCAGTGCTCAGCGGCGCGGTGCGGCCGACGCCGCGGT
CGGAGCCGCTCCCGCCGCCGCGCGCAGGGGGAGGGGGCCTTCAGGGGCAG
GGGAAGGGCGAAGGGGGCGACGTTGCGCGGCTCGTGGGGTTGAGCTTTGC
GGCGGAGGTCGCGCGCGCGGGGCGCGACGCGCTGGTCGCGGTGGTGTCGC
CGAGGTGCGCGGCGAGCAGGGCGCTGCGCGTGGAGCTGGCGGTGCTCGCG
CACGCGCTCGCCTCCGAGTCGCGCGTTCTCATCGCCTATGTGGACGGCAC
CGCCAACGACCTGCCCGCGTCGGTGCGCGTAGATGCGTACCCGGCGGTGC
TGTGGTTCCCTGCACGCGGCAAGCCGTACGCCGACGCCTCGCTGCCGGAG
CCCGCGCCGTACTGGGAGGACGCGCTGGGCTTCGAGGACATGCTCGGCTT
CATCGTACAGGACGCGTCGCGGGTGTTCGAAGACGTCCTCGGGGTCGTCA
TCCAGCAAAGCAGCTTCGACCGTGCCACGCTGGCGGTGCCCGACTGGCAG
GGCATGGACGCGCTGTACGCGGCACGCGACGAGCTGCTGGCGGCAGCAGA
AACACAGGCGCATTGGGAGCTTCGCAACGCGCGCCGCGCCCACTACACGT
CGCCACGCTTAGACTGGGCATTTGGAGAAGTTGTATTTGACGGACGGCGG
TGGCACATTGCCGCCGCGTTCGCAGCGCCGCTCGCGATGCTGGCGGCGCA
GTGGTGGCGGCGGCGGCGGAAACGGCGGCGGCGGCGGTTACTGCAGGCCG
AAACGCCGCGCGCGGGTGCTGCATCGCCTGGTTCCCCCAGTTCCCCGCAG
TGATTTATTGTTGAAGGAGCCCTCAGACAACCGATGTCATTCAGCAATCC
TCTTGCTGAATTGTCCGCCGGGCCCATCTCCTCCCGTCCTCCTTTTTGCC
CCCTGTACACCCTATGGAGAGTATGTTGACAACTGTCAGACGTTGACTTT
CACAGCAATGCACTTTATACCAA

protein sequence of jgi.p|Trimin1|353936

>Trimin1|353936|estExt_Genemark1.C_Ctg_1970023 ID=Trimin1|353936|estExt_Genemark1.C_Ctg_1970023|Name=jgi.p|Trimin1|353936|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1101bp
MKAKANRPPRRRTLDPSFGARCDTGGSGGHSGAWGWRWWQHSHPVRPPPS
VPTTKAYGSSGAKGGTGPARGSCGGGYWRSGGGSGCSSSHNSVVSPASDT
RSCAATGPHTSSTQMSAEDDELDDSAGAHPYGGDGGSSDSTDWHQCSGGS
SAAELVELTTASAAHDVASTAHGGDGRQACSMGICCSSSSSNGSHTEGAF
VIVARHTASKPDVLDLDDGNLETLLDTYPYLALAVLDDSPRSLALAAVWE
QASAALLRAHGGGSGGGGGRGGGGSGGGGGVGGGDGGDADAAAQFARVVL
PQQPGVHEWLAMYEGVPKQTRRERARCRDGRARRTHGALLPCHRAQAGAA
AAPAAVVIRHGAVYEYGGSLDAPQRAAAYVLEDSQPVVARVRSVRGVGLL
LRQGTVAVRSDADGHRWRTAAAPAPSRVVLGLFPEGAADGGCADAYAADG
AAPLLSTAWQHFCAVAEALRGSGGDGAAAFSSGSAGGGGGDGGGGGGSSG
SGARAGGNGDGHSSDDGGSSGGGGSGGSSGCSGGSGCSGGSGGMAFAVTT
DARLFDAVAGAGDTLAAARAEAAWRDAAAAAAAGDGGGVQEMGGAFTDAP
ALVLLEPTAPILSGDAAAHYSTHTYTGPLARRPLLDWVLATAPPPLTRLV
GGPRAGPARVLLTARWLAARSGGGGGGGGGGVPALRVIAFTRGDAAEVAE
LAAAACALRGAAAFGYVVGGSFEEASAAAACPQQRIASLTKTAQLKLQCA
AASPWLPAGVADAAAARAYGVDTTARRRAAAAIVAHDRESGLRYHMPAPP
PSAPVTAVTAVTATDVMEWAAAVLSGAVRPTPRSEPLPPPRAGGGGLQGQ
GKGEGGDVARLVGLSFAAEVARAGRDALVAVVSPRCAASRALRVELAVLA
HALASESRVLIAYVDGTANDLPASVRVDAYPAVLWFPARGKPYADASLPE
PAPYWEDALGFEDMLGFIVQDASRVFEDVLGVVIQQSSFDRATLAVPDWQ
GMDALYAARDELLAAAETQAHWELRNARRAHYTSPRLDWAFGEVVFDGRR
WHIAAAFAAPLAMLAAQWWRRRRKRRRRRLLQAETPRAGAASPGSPSSPQ
*

mRNA from alignment at Contig_197:214515..224028-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16441 ID=mRNA_16441|Name=jgi.p|Trimin1|353936|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9514bp|location=Sequence derived from alignment at Contig_197:214515..224028- (Tribonema minus UTEX_B_3156 )
ATGAAAGCGAAGGCGAACAGACCGCCGCGGCGCCGGACCCTTGACCCGTC
GTTCGGCGCACGCTGTGATACGGGGGGCAGCGGGGGGCACAGCGGCGCGT
GGGGGTGGCGGTGGTGGCAGCACAGCCACCCAGTGCGGCCGCCGCCTTCA
GTGCCAACCACAAAGGCTTACGGCAGCAGCGGCGCTAAGGGCGGCACTGG
CCCGGCCCGCGGCAGCTGCGGCGGCGGCTACTGGCGCAGCGGCGGCGGCA
GCGGCTGCAGCAGCAGCCACAACTCAGTGGTCAGCCCTGCCAGCGATACG
CGCTCGTGTGCGGCGACAGGACCGCACACGTCATCTACGCAGATGAGCGC
GGAGGACGACGAGCTGGATGACTCCGCAGGCGCGCACCCGTACGGGGGAG
ACGGCGGCAGCAGCGACAGCACGGACTGGCATCAATGTTCAGGCGGCAGC
AGCGCTGCCGAGTTGGTGGAGCTGACCACCGCGTCGGCGGCGCATGACGT
GGCGAGCACCGCTCACGGCGGCGACGGCCGCCAGGCCTGCAGCATGGGGA
TTTGCTGCAGCAGCAGCAGCAGCAACGGCTCGCACACCGAGGGTGCGATT
GCAATTCACAGTGGCAGGAGCGCACGGCGCCTCGCACTGCACGCGCAGGC
GCGTTCGTTATCGTGGCCCGGCACACTGTGCTGAGCCCATGTTGCATACA
GAAAATTCAGTTCGATGCGATGACATTATCACATATCCGACAAACGCGAC
AGCAGCCCGGGACACTTGTCCGCATATTCGCAGGCCTCCAAGGTGCGGCG
GACAACCTGCGCGGTCGTTACTGCATGTACAGGTACTGCATGTTCAAGGC
CACATCATGATGATCATCTATTGATGGACCATGTAGTAAATACACGCTCG
CTTCTGCAACGCGGACATTGCGTCTTGTGTTGCTCTGCAGCAGCTGCAAT
GCATGGCCTGGTACATATGAATGCATCAGGATGCCGATGACCTTGTGTTC
CGCAATACATCGAGGGATGAAGTTCATGTCATCAACATGTGGTGGGAGGA
ACTTTCAACCTCCCAAAATTTCTACTTCAAGTTTGCATGCTTGAAGTTGC
AGTTGAACTTCAGCCTCGATGTTGCAACGCCACAAAAAACAAGCAAGCAA
GCAAAGCTCTCAAGCAGCTTCTGGATGACCTTGTGAGGCGCCCAGGCGCA
GCAAGCAAACAGAGCTTTCTCAAGAATGCGGTGGTGCGCCTCAGAAGCGA
TACTTGAGTGGAGTCCAAGATCCTGTGAGGGATCTTGAGGATCGGAAATG
GACTGAAGCGCTGTGAGGGAGCCACGCAATGGACGATCAATGTCGAGAAC
CTGTGGCCTTCGAGGTGAGTCACTGATTGCTTCGCTCGGGCATGCATGCA
TGCGCGTCCTGAGAATCGAGCTGCAACTCTGTGCTGCCAAGCTGAACCTG
GCCAGACGCATGTGTTCAAACTTGTGCATCGTTTCTCGAGTCAAGCACAA
AAATCGGCAGTTCGTGTTGCCCCACCAGCAAATCTGAGACATGTAAGATG
AACCACGCATGCATCTTTGCTAGAGGTACAAGTGTGGCCTGACACGGAAG
CACTGGCATGCCTTGCCAGTGCCAACGTGCAGGCACGCCGCAAGTCGTCC
TAGGCCATGTCCAACTCGAGCCCACATGAGCGTTTGCTGATGCGCGCACA
CAGACAAGACCACCGCCACACTCTTCCTCTTGGCAACCACGAGTGCCCCC
CGCCTTGGCGCCAGGCGTACGCAATCAGCAGGGACGTAGCAGCAGGCCAG
CTGCGGCGTCCGTTGAAGAGCATCCATTGTGGTCTAGAGAGATGCTGCCA
TGACAAAGCCTACATTACATATACCTATGGCCATAAAAGAGGCAGCCGGC
ACACAATATTTCGCTGCGCTCACGCCTCCGACAGCCCAAACCCCCGCGTG
CGCCGCCACTACGCCCCCCCCGCCCCCCCCTGTTACGCCAGCCCGACGTG
CTGGACCTCGACGACGGCAACCTTGAGACGCTGCTGGATACCTACCCCTA
CCTGGCGCTGGCAGTGCTCGACGACTCGCCGCGCAGCCTCGCGCTCGCCG
CCGTCTGGGAGCAGGCCAGCGCGGCGCTGCTGCGCGCACACGGCGGCGGC
AGCGGCGGCGGCGGCGGTCGTGGCGGCGGCGGCAGCGGCGGCGGCGGCGG
CGTCGGCGGCGGCGACGGAGGCGATGCGGACGCGGCGGCGCAGTTCGCGC
GGGTGGTGCTGCCGCAGCAGCCGGGCGTGCACGAGTGGCTGGCCATGTAC
GAGGTACGCGCGCACGTCAGTCTGATCAGTGCGCTCCGTTTACGCGAAAC
AGACAGCGTGAGCAGCGCCATTCCGTCATGATGAACCATGCGGCAGGCGC
CCCGTTGGCAGCTCTCAAGGGCGTCCCGAAGCAGACGCGCCGCGAGCGGG
CGCGCTGCCGCGACGGACGCGCGCGCCGCACGCACGGAGCGCTGCTGCCG
TGTCATCGCGCGCAGGCCGGCGTGAGCACAGCGCGAAGTCCTCCTGCATT
GAGGCCGCAACGTCGCCTCATTCGTGCAGACTACAGCACGCGCGAAGGTG
CACTTCTCGCGGCCATTGACGCCGCTGACGCGCCTCAGGCGCACACCTCT
CATGACTCACAAGTCACGACTCACTCATGCATCCAAGTCACCCCGTCCTG
CTGCGCGCGCGCCTCAGGCGGCGGCGGCGCCGGCCGCGGTGGTCATCAGG
CACGGCGCCGTGTACGAGTACGGAGGCTCGCTGGACGCACCGCAACGCGC
CGCCGCGTACGTCCTGGAGGACAGCCAGCCCGTAGTGGCGCGCGTGCGCA
GCGTGCGCGGCGTCGGCCTGCTGCTGCGGCAAGGTCGGTGGGCAGCGCTC
GACAGTGCATGTGCCTGTGCGCTGCTGCGTGCTGCGTGTGCTGCGGTGCC
GCCTGCGGAGTGGCTGAGCTGCTGCGTAGCCGGCCCGCGTGTACTTACAT
GTGACTTCAAGCCAAGTGTAAGTTCAAGTGAGTTTGGCGCAAGGGTGGCG
CACCGTGCACGCGGCGCGCCGGCCCCGCAGCGCAGGTGACATCAGCGTGC
GGATGTCCCATGCAGCAGCGCTCAATCCCCTCAGTCACCGTGCCAGAGCG
GTCGGCTGCGCTGCACAGCGCAGCGGCAGACATTGAACTTTCGTTCTCAG
ACTAACTATGTGGACAAGTGACATTGACTCTCACTCATGCGACTCACTTG
GCAACTGACGATGGTGTTCAAGATGCAGTTGGACGAACTCCACACAGTGA
GGTTGATGTTGAGGATGAAGTTGGATAATAAAATAATGCATTGTAAGTAA
AAACACTTGCGCCAGCATCTCACTGTTCCCACTGTAAATGACTGGGGCCC
TGCAGAGCATGCTCGGACACAAGTCAGCGTCGAGCGCTGCTGCGGGCAGC
CGACAGACGGGGGCCGCGCTGCAATCACGACACCCACCGTAGAACCTGCG
TTTGCGCAGGCGCTGCGGACATGGCGCTTCTCCCCCCCCCCACCCCCCTC
ACTCCCCAACAGTGCCATACATACCCATACACCCACCGCAGAACGTGCGT
CCGCGCAGGTACTGTCGCCGTGCGCAGCGACGCTGACGGGCACCGTTGGC
GCACGGCGGCGGCCCCGGCGCCCAGCAGGGTCGTCCTGGGACTGTTCCCG
GAAGGCGCCGCGGACGGCGGCTGTGCGGACGCGTACGCCGCTGACGGCGC
CGCGCCCCTGCTGAGCACTGCCTGGCAGCACTTCTGCGCCGTCGCCGAGG
CGTTGCGCGGCAGCGGCGGCGACGGCGCTGCCGCCTTTAGCAGCGGCAGT
GCAGGTGGCGGCGGCGGCGATGGTGGCGGCGGCGGCGGCAGCAGCGGCAG
TGGTGCCAGGGCCGGCGGCAACGGTGATGGCCACAGCAGTGATGACGGCG
GCAGCAGCGGCGGCGGCGGCAGCGGCGGCAGCAGCGGCTGCAGCGGCGGC
AGCGGCTGCAGCGGCGGCAGCGGCGGCATGGCGTTTGCGGTCACGACGGA
CGCGCGCCTCTTTGACGCGGTTGCGGGAGCGGGCGATACGCTGGCGGCGG
CGAGGGCGGAGGCGGCGTGGCGCGATGCAGCAGCAGCGGCAGCAGCGGGA
GATGGGGGCGGAGTGCAGGAGATGGGCGGCGCGTTCACTGACGCTCCCGC
TTTGGTGCTTCTCGAGGTGCGTGGTACTCGTAATGGCTCGCATTGCTCTG
CATGTGGCGCTGTTGTTAATCCTGGTAACGCTTCCTTTGGCTTATTGTAG
CCTGGGTCTTCGCGGCGCGGGAGACGCACACACGAGTGATGGTGGCCGAT
GTGTACGTGCTGGTGCACTGACGATGCGTGTCAATCGTGTGCTATAAACT
AGCGTTAGGGACGCGGTTGTACTGCAGTTGCATGTCTCAGCGCAGCGCGT
CTTCTGCGCACCGCTGCACCGGCAATCACAGGGCGCGGGTTTCGTATGGT
GGGCTTGGCAAGTCCTTCTCTTTCTCTCCAGCTGAAGAATGCCGCATCGA
GTACACTATTACTCTTGCTCCCACTGATTGCTTTTGTGGGCACGCCAGCA
ACCTGTCCTCGCTCAATGTGGCTGGCGCGATCGTTTCCAATCGGGCAGCT
CGTGACAGCATTTCAAACGCCTGCAGCTGCACTACATCACAATCAGTTCA
ACTTTACGTCATCCAGAGAAGTTTCAACAATGCTAAGCGAGACTTGATGA
GAGCCCGCCCTCCCCCCCCCCCCCCCGCCCCCGCCCCTGCACGCGCCCCC
CCCCCCCAGCCCACAGCCCCAATCCTCAGCGGCGACGCCGCCGCGCACTA
CTCAACGCACACCTACACGGGCCCCCTGGCGCGCCGCCCCCTGCTAGACT
GGGTCCTAGCAACGGCGCCGCCGCCGCTGACCCGACTCGTCGGGGGCCCC
CGCGCGGGGCCCGCTCGCGTGCTGCTCACGGCGCGCTGGCTCGCTGCTCG
CAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTGCCGGCGCTGCGCG
TGATCGCCTTCACGCGTGGCGACGCGGCGGAGGTGGCGGAGCTGGCGGCG
GCGGCGTGCGCGCTGCGCGGCGCGGCGGCGTTCGGCTACGTCGTGGGCGG
CAGCTTCGAGGAGGCGAGTGCTGCAGCGGCATGCCCTGTGTTTACCATCT
ACTCTCCGATACGTTTGCTGTTCATGTGTGAAGGAGCCGGCAGGCGTAAG
CTTCGAGTGATGCTGAGAGTGAGGAAAGGCCGTAGCGTGTACGCGGGCGC
GCGTCCGTTGTATAGCTGGCACTGCAGCAGGCGAGTGCCGCAGGGGGCGC
TGCCGCATGATTCGTCTGCATTAAGCTTGTTGCTGACGTGTGAAGTGGTG
CACAGGGGGGGAGTCATCGGCGTCAGCTCTGAGCGGTGCTTCAAGGACAG
GCGCAAGGGTCGTGAGCGCGTGCGCGTATTTGCATGGCGTGTCCGCGTTG
CTTATCTTCGTTGAGCTCGCCGTGCATGAGTGAAGTCGGCGCGAAGGAGG
AGAGCGCTGGGAGGGGGGGGGGGAGGCGCCGCTCTGCAGCGCTCGGCTGC
GCACGCGGCCGCGCTTCTACCTTGAACGGCGGACATCAATCTCAAGTGAT
GCTTCCAGCGACAGAAGCGCGGGCGGCGCGTCATGCGAGTGTGCAAATGC
GCGTGCAGTCAAGTGTAGGAGGCAAGCGGCACGTGCATTCACGCGCGCCT
TCACAGCGCGCAGCAGCAGCGCATCGCTTCGCTCACCAAGACGGCTCAGT
TGAAGTTGCAGTGCGCGGCGGCGTCCCCCTGGCTGCCGGCTGGTGTGGCG
GACGCTGCCGTCGGGACAGCACGGTCGGCAATGCTCGTCGATTCACTCGC
TTCGTGGCGCGGACACTCGCGAGGGCTTGCTGGCTGCGCCAGCGCCGCCG
CCGCGCCGCCGCGCCACCGCCCACAGCTGCTACGATGGTATCATGCACCC
AACTACCGCGCCACTGCCTCGCACACCTCACCACCCCAGTGCTCCGCGAC
CTCATCTAGAGCGGCTCCTTTGCTTGCCACAATCCACACACACACGCACG
TGCACGCGCAGGCGGCGCGCGCCTACGGCGTCGACACCACGGCGCGGCGC
CGCGCCGCCGCCGCCATCGTCGCACACGACCGCGAATCAGGCCTGCGCTA
CCACATGCCCGCGCCGCCGCCGTCAGCGCCCGTAACTGCCGTAACTGCCG
TAACCGCCACCGACGTCATGGAGTGGGCGGCGGCAGTGCTCAGCGGCGCG
GTGCGGCCGACGCCGCGGTCGGAGCCGCTCCCGCCGCCGCGCGCAGGGGG
AGGGGGCCTTCAGGGGCAGGGGAAGGGCGAAGGGGGCGACGTTGCGCGGC
TCGTGGGGTTGAGCTTTGCGGCGGAGGTCGCGCGCGCGGGGCGCGACGCG
CTGGTCGCGGTGGTGTCGCCGAGGTGCGCGGCGAGCAGGTGCGTCGCCGC
CGCGGAATCTGTGCAGTTGAAGTTGCACCATGTCCAGGAGCCGCATGTTT
TTGCGGAAGCGTGGAGAGCGGCTGCGCAGCGCGGCGCGGCTGAAGCTGTC
GGCGATACGCAGCGCCGCGAGCTCAGATGGAACCCACAACGGGCAACCGC
GGCCGAGATGATGCGCTCCGCTGGCTGCGCGCGTTATGGCGCAACTTGCC
CACCTATGTACATGAGCTGTAGTGCTCATGAGCCCCCCCCCCCCCCCCCC
CCCCCGCCCACGCACGCCCCCCCCACTGGCTGCGCGCGGTACGGCGCAAC
TTGTGTACATAAGCTGTAGCGCTGATTGCGAGCCCTCCCCCCCCCCCCAG
GGCGCTGCGCGTGGAGCTGGCGGTGCTCGCGCACGCGCTCGCCTCCGAGT
CGCGCGTTCTCATCGCCTATGTGGACGGCACCGCCAACGACCTGCCCGCG
TCGGTGCGCGTAGATGCGTACCCGGCGGTGCTGTGGTTCCCTGCACGCGG
CAAGCCGTACGCCGACGCCTCGCTGCCGGAGCCCGCGCCGTACTGGGAGG
ACGCGCTGGGCTTCGAGGACATGCTCGGCTTCATCGTACAGGTGACGCGC
CCACTAAGTTGCAGTTTGTGTGTACTGGAGTTAAAGTTTTGTTGAGTACA
GGTCAAATGTTTAAATATTGCAACCCGCGCCGTCCTGGGAGGACGCGTCG
CGGGTGTTCGAAGACGTCCTCGGGGTCGTCATCCAGGTGGTGCTTACCTC
GTGGAAGTTGAGGTTAAGACCGAAGCTGAAATTCTGCCCGTGCAACAAGC
CTTGTGCACATCCCGCGCTGCCGGAGCCCAGGCAGCAGCACGGGACGCGT
GCGCGTTTGTTGTCTGGGCGATGGCGGCGCGTACGCAGCGGCTGCGGCGC
TCGATGACATGCCAAAGTTGAAGTCTTAGCGTGGCGTACTGGAAGTTGAA
TCGTGAGGTCTCCTGTGCACGCGCGTCGAGTCACAAGCCGCATGCGCGGG
AACTTCTTTCACTGCCGGAATACTTCCTTTTTCACGCTGAAGTGTGCGCT
GTAAAACGAGGCGGCGGGAAGGGGTTGGAGTCCGAGCGCACGCTCAGACC
AGGCGCGCTGTTGCATCGAAGCTGGAGCCAAGGCCCCTGATTTGAAAGCA
CAAATGGAGCTTTCCATGAAAATGAGGTGGACGCAGAGGGTACAAGGACT
TGTCGGGGTTCGCGGCGCTAACCCTAACACTAACCTAACCCTAGCCCTGA
CCCTAACGTATCAAGGCCTACAAAACAGCTTCACACTTGACATTACTCCA
GTAATTGTGACGTATGCATCCATAAAGGCGTACAGAAGCTGTACGCTCGG
AATGCCTCCAGAATCCCACAGTACTTGTGATCTATGCATGAGTGTTGTGT
ATATGTTTACGAATAGATACCTACCCCCCATCATGCGTTCATGAAGCCTA
CTCACACGAATGAGCTCATGCACACATTCCACATACTGCTTATTACATGC
ACGCTTTGGTGTACGTCAAACTTCTTGCGTCACACGCAGACGCATTGAAA
GCATGAAATGGAAGCGCTGACACGACCATCTCTGCACTCCCCGCCTTCCC
CACGCCGTGCTCCGCCGCGCCCTGCAGCAAAGCAGCTTCGACCGTGCCAC
GCTGGCGGTGCCCGACTGGCAGGGCATGGACGCGCTGTACGCGGCACGCG
ACGAGCTGCTGGCGGCAGCAGAAACACAGGTGAAACATCGCTGCGCCGCG
CGTAGCCTTTGCGACGTGCAGCCAGTCGTGTTGACAGGAGCGGGAGCTCG
CGTGATGCGGCAGCGAGCGCGACCGCAGATCGATGGCGGACGGCGCGTTG
CGGTCAACTGCTGGGTCGTTAACGTGTAGACTAGAGCTGGTGGGGACAGC
GCGGACGCGCAGGTGAGGCAACGCTTGCCGCACATGCACCCATTCAGTGG
CAGTTTTTTCATGTGCGAGCGGCGTGTGTGCAACATGCTCTACGTGCGGC
TCTTGCGAAGCGGGGCGAGGGCCACCACGAATTGATAGCACAGTGAGACG
CAGTTCATTGCTGGACCGCAGCGATGGACGCGCAAGCGCAGCAGCGCTTG
CCATCTCGCATGTGCGGCATACAACATGCATGTATACAACAACGCCCCAG
CACTGACAGGCGCGTGCTGCCTGGCCAGCGCCTGCTCCTGTACGCACGTG
TCGTTGGGGCTTTTTTCAGGCAGCGCGCGTTGGCTTACGCTTGCCGCGCT
GCGGGGCACGCGCAGTCCATGCCAAGGGGGGGGGGGGGACGACAGAGGCG
TCAATGGCAGCAGCGATCACAGCATATGTTGCACCGATGACGATCACCCA
AGTCGATCAGGATCACGTCCGCACATCCGCGTGCTGTGCGCTGTCTGCGG
GCAAGCTTTCGCACAGCCCGTACTGATGGTCCGTGCTGCTGCAATATATA
CATTACGTCCATCAGATGGAGAAGGACATGAATGGTGTGAGATGCAAACA
CGACGCAGTAGTGCCTGTCTCGAATCCCCTTGTACCCCCCCCCTCCCCCG
CGTCTTACAGCCCCCCCCACCCGTTCCCCCCCCGCCCTGCGCCCCCAGGC
GCATTGGGAGCTTCGCAACGCGCGCCGCGCCCACTACACGTCGCCACGCT
TAGACTGGGCATTTGGAGAAGTTGTATTTGACGGACGGCGGTGGCACATT
GCCGCCGCGTTCGCAGCGCCGCTCGCGATGCTGGCGGCGCAGTGGTGGCG
GCGGCGGCGGAAACGGCGGCGGCGGCGGTTACTGCAGGCCGAAACGCCGC
GCGCGGGTGCTGCATCGCCTGGTTCCCCCAGTTCCCCGCAGTGATTTATT
GTTGAAGGAGCCCTCAGACAACCGATGTCATTCAGCAATCCTCTTGCTGA
ATTGTCCGCCGGGCCCATCTCCTCCCGTCCTCCTTTTTGCCCCCTGTACA
CCCTATGGAGAGTATGTTGACAACTGTCAGACGTTGACTTTCACAGCAAT
GCACTTTATACCAA

Coding sequence (CDS) from alignment at Contig_197:214515..224028-

>mRNA_16441 ID=mRNA_16441|Name=jgi.p|Trimin1|353936|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3303bp|location=Sequence derived from alignment at Contig_197:214515..224028- (Tribonema minus UTEX_B_3156 )
ATGAAAGCGAAGGCGAACAGACCGCCGCGGCGCCGGACCCTTGACCCGTC
GTTCGGCGCACGCTGTGATACGGGGGGCAGCGGGGGGCACAGCGGCGCGT
GGGGGTGGCGGTGGTGGCAGCACAGCCACCCAGTGCGGCCGCCGCCTTCA
GTGCCAACCACAAAGGCTTACGGCAGCAGCGGCGCTAAGGGCGGCACTGG
CCCGGCCCGCGGCAGCTGCGGCGGCGGCTACTGGCGCAGCGGCGGCGGCA
GCGGCTGCAGCAGCAGCCACAACTCAGTGGTCAGCCCTGCCAGCGATACG
CGCTCGTGTGCGGCGACAGGACCGCACACGTCATCTACGCAGATGAGCGC
GGAGGACGACGAGCTGGATGACTCCGCAGGCGCGCACCCGTACGGGGGAG
ACGGCGGCAGCAGCGACAGCACGGACTGGCATCAATGTTCAGGCGGCAGC
AGCGCTGCCGAGTTGGTGGAGCTGACCACCGCGTCGGCGGCGCATGACGT
GGCGAGCACCGCTCACGGCGGCGACGGCCGCCAGGCCTGCAGCATGGGGA
TTTGCTGCAGCAGCAGCAGCAGCAACGGCTCGCACACCGAGGGCGCGTTC
GTTATCGTGGCCCGGCACACTGCCTCCAAGCCCGACGTGCTGGACCTCGA
CGACGGCAACCTTGAGACGCTGCTGGATACCTACCCCTACCTGGCGCTGG
CAGTGCTCGACGACTCGCCGCGCAGCCTCGCGCTCGCCGCCGTCTGGGAG
CAGGCCAGCGCGGCGCTGCTGCGCGCACACGGCGGCGGCAGCGGCGGCGG
CGGCGGTCGTGGCGGCGGCGGCAGCGGCGGCGGCGGCGGCGTCGGCGGCG
GCGACGGAGGCGATGCGGACGCGGCGGCGCAGTTCGCGCGGGTGGTGCTG
CCGCAGCAGCCGGGCGTGCACGAGTGGCTGGCCATGTACGAGGGCGTCCC
GAAGCAGACGCGCCGCGAGCGGGCGCGCTGCCGCGACGGACGCGCGCGCC
GCACGCACGGAGCGCTGCTGCCGTGTCATCGCGCGCAGGCCGGCGCGGCG
GCGGCGCCGGCCGCGGTGGTCATCAGGCACGGCGCCGTGTACGAGTACGG
AGGCTCGCTGGACGCACCGCAACGCGCCGCCGCGTACGTCCTGGAGGACA
GCCAGCCCGTAGTGGCGCGCGTGCGCAGCGTGCGCGGCGTCGGCCTGCTG
CTGCGGCAAGGTACTGTCGCCGTGCGCAGCGACGCTGACGGGCACCGTTG
GCGCACGGCGGCGGCCCCGGCGCCCAGCAGGGTCGTCCTGGGACTGTTCC
CGGAAGGCGCCGCGGACGGCGGCTGTGCGGACGCGTACGCCGCTGACGGC
GCCGCGCCCCTGCTGAGCACTGCCTGGCAGCACTTCTGCGCCGTCGCCGA
GGCGTTGCGCGGCAGCGGCGGCGACGGCGCTGCCGCCTTTAGCAGCGGCA
GTGCAGGTGGCGGCGGCGGCGATGGTGGCGGCGGCGGCGGCAGCAGCGGC
AGTGGTGCCAGGGCCGGCGGCAACGGTGATGGCCACAGCAGTGATGACGG
CGGCAGCAGCGGCGGCGGCGGCAGCGGCGGCAGCAGCGGCTGCAGCGGCG
GCAGCGGCTGCAGCGGCGGCAGCGGCGGCATGGCGTTTGCGGTCACGACG
GACGCGCGCCTCTTTGACGCGGTTGCGGGAGCGGGCGATACGCTGGCGGC
GGCGAGGGCGGAGGCGGCGTGGCGCGATGCAGCAGCAGCGGCAGCAGCGG
GAGATGGGGGCGGAGTGCAGGAGATGGGCGGCGCGTTCACTGACGCTCCC
GCTTTGGTGCTTCTCGAGCCCACAGCCCCAATCCTCAGCGGCGACGCCGC
CGCGCACTACTCAACGCACACCTACACGGGCCCCCTGGCGCGCCGCCCCC
TGCTAGACTGGGTCCTAGCAACGGCGCCGCCGCCGCTGACCCGACTCGTC
GGGGGCCCCCGCGCGGGGCCCGCTCGCGTGCTGCTCACGGCGCGCTGGCT
CGCTGCTCGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTGCCGG
CGCTGCGCGTGATCGCCTTCACGCGTGGCGACGCGGCGGAGGTGGCGGAG
CTGGCGGCGGCGGCGTGCGCGCTGCGCGGCGCGGCGGCGTTCGGCTACGT
CGTGGGCGGCAGCTTCGAGGAGGCGAGTGCTGCAGCGGCATGCCCTCAGC
AGCGCATCGCTTCGCTCACCAAGACGGCTCAGTTGAAGTTGCAGTGCGCG
GCGGCGTCCCCCTGGCTGCCGGCTGGTGTGGCGGACGCTGCCGCGGCGCG
CGCCTACGGCGTCGACACCACGGCGCGGCGCCGCGCCGCCGCCGCCATCG
TCGCACACGACCGCGAATCAGGCCTGCGCTACCACATGCCCGCGCCGCCG
CCGTCAGCGCCCGTAACTGCCGTAACTGCCGTAACCGCCACCGACGTCAT
GGAGTGGGCGGCGGCAGTGCTCAGCGGCGCGGTGCGGCCGACGCCGCGGT
CGGAGCCGCTCCCGCCGCCGCGCGCAGGGGGAGGGGGCCTTCAGGGGCAG
GGGAAGGGCGAAGGGGGCGACGTTGCGCGGCTCGTGGGGTTGAGCTTTGC
GGCGGAGGTCGCGCGCGCGGGGCGCGACGCGCTGGTCGCGGTGGTGTCGC
CGAGGTGCGCGGCGAGCAGGGCGCTGCGCGTGGAGCTGGCGGTGCTCGCG
CACGCGCTCGCCTCCGAGTCGCGCGTTCTCATCGCCTATGTGGACGGCAC
CGCCAACGACCTGCCCGCGTCGGTGCGCGTAGATGCGTACCCGGCGGTGC
TGTGGTTCCCTGCACGCGGCAAGCCGTACGCCGACGCCTCGCTGCCGGAG
CCCGCGCCGTACTGGGAGGACGCGCTGGGCTTCGAGGACATGCTCGGCTT
CATCGTACAGGACGCGTCGCGGGTGTTCGAAGACGTCCTCGGGGTCGTCA
TCCAGCAAAGCAGCTTCGACCGTGCCACGCTGGCGGTGCCCGACTGGCAG
GGCATGGACGCGCTGTACGCGGCACGCGACGAGCTGCTGGCGGCAGCAGA
AACACAGGCGCATTGGGAGCTTCGCAACGCGCGCCGCGCCCACTACACGT
CGCCACGCTTAGACTGGGCATTTGGAGAAGTTGTATTTGACGGACGGCGG
TGGCACATTGCCGCCGCGTTCGCAGCGCCGCTCGCGATGCTGGCGGCGCA
GTGGTGGCGGCGGCGGCGGAAACGGCGGCGGCGGCGGTTACTGCAGGCCG
AAACGCCGCGCGCGGGTGCTGCATCGCCTGGTTCCCCCAGTTCCCCGCAG
TGA