Trimin1|353885|estExt_Genemark1.C_Ctg_1920012 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353885
Unique NameTrimin1|353885|estExt_Genemark1.C_Ctg_1920012
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length597
Homology
BLAST of jgi.p|Trimin1|353885 vs. uniprot
Match: A0A835Z4P2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4P2_9STRA)

HSP 1 Score: 1069 bits (2765), Expect = 0.000e+0
Identity = 594/596 (99.66%), Postives = 594/596 (99.66%), Query Frame = 0
Query:    1 MLLGRAYCGNRVVRRLAPPLQRSWRHCKACFSTSLNVESGRAWAGGAATELPIGIVPVETSKGDNESAAVHAVMQKVGVVGYGDPWVGRPKEDIEGLKTAITHDGCSSTELCVDEGMCVNAXXXXXXXXXXXXXXXXXXXXVDKGSHAYSWEMGVVADLVVQERVKXXXXXXXXXXXXXXXXXREDLVLMSSVASDGLPLEDALAATRVEAQLASLLALHGLERLDVLCVEVPQQYKAEGGKASEGEHAQPVTPFADMAAMIAQQLSAFRDRCYSELRKASLRERAAELMGTALMRELYQTGRVGAVGFWWRAANPHTRFSAPPAEGHDSYEARMRDCVLGDIIACRDASMPAGTPLIVQYPVGVGSEYSWAYRGRRVLHADRAKTGRPFTFIDSAVSASQAPRLEALSELRETFNQAMHLERIFKDTMVSWAHILAHTQHRLEGYDEWVKVRVLKLEPGLEQAVEALLQNKQTREWATAYRHYMRLLLSQFTAMLEFNKAHLLGTMAQAMDAAAPSLSVLPPSAISARCVSAALSMGVDAVLSDVYVSQGDAATAPLVRVPPDEVVMLMQTTALPPSQATPDPEXXXXXTSSEQQ 596
            MLLGRAYCGNRVVRRLAPPLQRSWRHCKACFSTSLNVESGRAWAGGAATELPIGIVPVETSKGDNESAAVHAVMQKVGVVGYGDPWVGRPKEDIEGLKTAITHDGCSSTELCVDEGMCVNAXXXXXXXXXXXXXXXXXXXXVDKGSHAYSWEMGVVADLVVQERVKXXXXXXXXXXXXXXXXXREDLVLMSSVASDGLPLEDALAATRVEAQLASLLALHGLERLDVLCVEVPQQYKAEGGKASEGEHAQPVTPFADMAAMIAQQLSAFRDRCYSELRKASLRERAAELMGTALMRELYQTGRVGAVGFWWRAANPHTRFSAPPAEGHDSYEARMRDCVLGDIIACRDASMPAGTPLIVQYPVGVGSEYSWAYRGRRVLHADRAKTGRPFTFIDSAVSASQAPRLEALSELRETFNQAMHLERIFKDTMVSWAHILAHTQHRLEGYDEWVKVRVLKLEPGLEQAVEALLQNKQTREWATAYRHYMRLLLSQFTAMLEFNKAHLLGTMAQAMDAAAPSLSVLPPSAISARCVSAALSMGVDAVLSDVYVSQGDAATAPLVRVPPDEVVMLMQTTALPPSQATPDPE XXX TSSEQQ
Sbjct:    1 MLLGRAYCGNRVVRRLAPPLQRSWRHCKACFSTSLNVESGRAWAGGAATELPIGIVPVETSKGDNESAAVHAVMQKVGVVGYGDPWVGRPKEDIEGLKTAITHDGCSSTELCVDEGMCVNAXXXXXXXXXXXXXXXXXXXXVDKGSHAYSWEMGVVADLVVQERVKXXXXXXXXXXXXXXXXXREDLVLMSSVASDGLPLEDALAATRVEAQLASLLALHGLERLDVLCVEVPQQYKAEGGKASEGEHAQPVTPFADMAAMIAQQLSAFRDRCYSELRKASLRERAAELMGTALMRELYQTGRVGAVGFWWRAANPHTRFSAPPAEGHDSYEARMRDCVLGDIIACRDASMPAGTPLIVQYPVGVGSEYSWAYRGRRVLHADRAKTGRPFTFIDSAVSASQAPRLEALSELRETFNQAMHLERIFKDTMVSWAHILAHTQHRLEGYDEWVKVRVLKLEPGLEQAVEALLQNKQTREWATAYRHYMRLLLSQFTAMLEFNKAHLLGTMAQAMDAAAPSLSVLPPSAISARCVSAALSMGVDAVLSDVYVSQGDAATAPLVRVPPDEVVMLMQTTALPPSQATPDPEPXXXATSSEQQ 596          
BLAST of jgi.p|Trimin1|353885 vs. uniprot
Match: A0A6H5L1B9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1B9_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.030e-26
Identity = 128/478 (26.78%), Postives = 193/478 (40.38%), Query Frame = 0
Query:  184 REDLVLMSSVASDGLPLEDALAATRVEAQLASLLALHGLERLDVLCVEVPQQYKAEGGKASEGEHAQPVTPFADMAAMIAQQLSAFRDRCYSELRKASLRERAAELMGTALMRELYQTG-RVGAVGFWWRAANPHTRFSAPPAEGHDSYEARMRDCVLGDIIACRDASMPAGTPLIVQYPVGVGS-------------------EYSWAYR-GRRVLHADRAKTGRPFTFIDSAVSASQAPRLEALSELRETFNQAMHLE----RIFKDTM--------------------------------VSWAHILAHTQHRLEGYDEWVKVRVLKLEPGLEQAVEAL-LQNKQTREWATAYRHYMRLLLSQFTAMLEFNKAHLLGTMAQAMDAAAPSL--------------------------SVLPPSAISARCVSAALSMGVDAVLSDVYVSQGDAATAP-LVRVPPDEVVMLMQTTALP 576
            REDL L+  + ++G P+++AL+  R    L  LLA HGL+ +D   +E+P      GG+    ++                                  R    E +  A+   +   G +V  +GF W+  NPHT            +  R  D  L DI+  RD   P+  P++  +PVGVG                    E +  ++ G  V HA R   GRPF  +D        P  + +S+L+  F  A+H+E    R F+                                   VSWAHILA  QH+L+G DEW  +R  +++P + +A++ L ++ +   EW   YR  +  L+   + ++E  K+H LG +A  MD  APSL                          S +    +  RC +AALS GVD VL++ + +  DAA      RVP DEV  L     LP
Sbjct:  155 REDLALLWELPAEGKPVKEALSPARAVEHLDCLLAYHGLDYVDSFVMEIPWN---TGGEDVVNDY----------------------------------RRFTGEAVRLAMTEFVEVAGDKVKTIGFSWKG-NPHT-----------PHPGRAPDSPLSDIVELRDLLTPS-KPVVAMFPVGVGCGATVDGLAAESGSGLLGLPENAGIFQIGTNVTHA-RRPDGRPFRLVD----VQSRPVEDIVSDLKSKFGMALHMEVEYSRRFEGKQRGTETGRSGDSSSDDEGAGSEESRSPLPPKADVSWAHILAQNQHKLQGLDEWETIRDSQIKPSVMRALDTLRMRGEAEGEWGFLYRSTLASLMMGLSEVMEVKKSHQLGEVAALMDDLAPSLREASRGVAQAGGAGNSSRSGGGSGAGSAVEGETVVGRCTAAALSTGVDCVLAEEFAASRDAARVTGFGRVPHDEVKKLYSGFRLP 577          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353885 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z4P2_9STRA0.000e+099.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L1B9_9PHAE1.030e-2626.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 572..596

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_192contigContig_192:97166..120571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353885mRNA_18149Tribonema minus UTEX_B_3156 mRNAContig_192 97133..120738 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353885|estExt_Genemark1.C_Ctg_1920012 ID=Trimin1|353885|estExt_Genemark1.C_Ctg_1920012|Name=jgi.p|Trimin1|353885|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=597bp
MLLGRAYCGNRVVRRLAPPLQRSWRHCKACFSTSLNVESGRAWAGGAATE
LPIGIVPVETSKGDNESAAVHAVMQKVGVVGYGDPWVGRPKEDIEGLKTA
ITHDGCSSTELCVDEGMCVNAITRGGCSLIELGAGEGMYVNVDKGSHAYS
WEMGVVADLVVQERVKSWEMGVVVDLVVQERVKREDLVLMSSVASDGLPL
EDALAATRVEAQLASLLALHGLERLDVLCVEVPQQYKAEGGKASEGEHAQ
PVTPFADMAAMIAQQLSAFRDRCYSELRKASLRERAAELMGTALMRELYQ
TGRVGAVGFWWRAANPHTRFSAPPAEGHDSYEARMRDCVLGDIIACRDAS
MPAGTPLIVQYPVGVGSEYSWAYRGRRVLHADRAKTGRPFTFIDSAVSAS
QAPRLEALSELRETFNQAMHLERIFKDTMVSWAHILAHTQHRLEGYDEWV
KVRVLKLEPGLEQAVEALLQNKQTREWATAYRHYMRLLLSQFTAMLEFNK
AHLLGTMAQAMDAAAPSLSVLPPSAISARCVSAALSMGVDAVLSDVYVSQ
GDAATAPLVRVPPDEVVMLMQTTALPPSQATPDPEPPAAATSSEQQ*
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