Trimin1|348064|estExt_Genemark1.C_Ctg_190056 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|348064
Unique Name	Trimin1\|348064\|estExt_Genemark1.C_Ctg_190056
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	612

Homology

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BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A835Z5K5_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K5_9STRA)

HSP 1 Score: 972 bits (2512), Expect = 0.000e+0
Identity = 611/611 (100.00%), Postives = 611/611 (100.00%), Query Frame = 0

Query:    1 MGAYEYTNLKSAKAFDEAIQAASRNLQAELPGRLSPDLAAFLLTALHLDARKRLSVADMLRHPWILRHAAXXXXXXXXXXXXXXXXRSAHAHMLAQQPRRDLTIDVPECNQERTERGDASAVSAVTADDGXXXGACDAAPCDLVVDSDDACPCTPPCDEDDGDDDNELDAASPQAVSPPYAAQEAALSAAQSLSMSHRARQLLPHGFHQPPDAPTTPSVGAMRDQFIHPGDALAHRLASGGPCTAPNTTSPATSTSPGSYAPSPLGMSPTVSPVNSPLRAFFKGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTCTAVRRAAAVKMISFDLDDTAIFFAAAASAHIRGIWPTREVITRANDALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHPSPIHLTALRREAIRRVLAEAAGAALMFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPPHWAPAAPPGATTVASDVHITAGPAAAVAAEQGESCVDCELGSFEELIGLVDRWNAEAAALASGGSSAL 611
            MGAYEYTNLKSAKAFDEAIQAASRNLQAELPGRLSPDLAAFLLTALHLDARKRLSVADMLRHPWILRHAAXXXXXXXXXXXXXXXXRSAHAHMLAQQPRRDLTIDVPECNQERTERGDASAVSAVTADDGXXXGACDAAPCDLVVDSDDACPCTPPCDEDDGDDDNELDAASPQAVSPPYAAQEAALSAAQSLSMSHRARQLLPHGFHQPPDAPTTPSVGAMRDQFIHPGDALAHRLASGGPCTAPNTTSPATSTSPGSYAPSPLGMSPTVSPVNSPLRAFFKGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTCTAVRRAAAVKMISFDLDDTAIFFAAAASAHIRGIWPTREVITRANDALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHPSPIHLTALRREAIRRVLAEAAGAALMFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPPHWAPAAPPGATTVASDVHITAGPAAAVAAEQGESCVDCELGSFEELIGLVDRWNAEAAALASGGSSAL
Sbjct:    1 MGAYEYTNLKSAKAFDEAIQAASRNLQAELPGRLSPDLAAFLLTALHLDARKRLSVADMLRHPWILRHAAXXXXXXXXXXXXXXXXRSAHAHMLAQQPRRDLTIDVPECNQERTERGDASAVSAVTADDGXXXGACDAAPCDLVVDSDDACPCTPPCDEDDGDDDNELDAASPQAVSPPYAAQEAALSAAQSLSMSHRARQLLPHGFHQPPDAPTTPSVGAMRDQFIHPGDALAHRLASGGPCTAPNTTSPATSTSPGSYAPSPLGMSPTVSPVNSPLRAFFKGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTCTAVRRAAAVKMISFDLDDTAIFFAAAASAHIRGIWPTREVITRANDALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHPSPIHLTALRREAIRRVLAEAAGAALMFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPPHWAPAAPPGATTVASDVHITAGPAAAVAAEQGESCVDCELGSFEELIGLVDRWNAEAAALASGGSSAL 611

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BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A6H5KPD2_9PHAE (zinc_ribbon_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD2_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 8.730e-33
Identity = 96/230 (41.74%), Postives = 115/230 (50.00%), Query Frame = 0

Query:  339 VKMISFDLDDTAIFFAAAASAHIRGIWPTREVITRANDALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LHPSPIHLTALRREAIRRVLAEAAGAA----------------------LMFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPP 543
            V+++SFDLDDT              +WPT  VI++AN AL                                  L P+P++LT LR+  + R   E AG A                       +FPGVL TL  LK RGVRL AITNGNA T  IPCL + FEFC  AEQVG RKP PGPF  A  +A YP   AV G  EWVHVGDD  +DC G +++ MRTVL+R P
Sbjct:  108 VEVVSFDLDDT--------------LWPTMTVISQANAALQEHLSREHPDLAEKYVIADLMKEIWKEKLVKNPELDPAPVNLTGLRKAGLARA-CELAGIADPTPVVESCFEVWRRARHDVERHLFPGVLDTLRELKGRGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQVGERKPQPGPFRAAVKKAGYPSEFAVGG--EWVHVGDDWASDCVGGKKMRMRTVLVRVP 320

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BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A7S2WI27_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WI27_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.480e-20
Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 0

Query:  438 MFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIR 541
            +FP VL  L  L+ +G+R+CAITNGNAD   +P ++E FEF  ++E+VGA KPDP PF  A  +A        +    WVHVGDD   DC  A+ +G RTV IR
Sbjct:    5 LFPEVLDCLRGLEAQGIRMCAITNGNADVYQVPPVSEFFEFSVSSEEVGAAKPDPLPFQRALEKA----GCTAEETSTWVHVGDDFKKDCAAAKSLGFRTVWIR 104

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BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A4D9D955_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D955_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 4.300e-12
Identity = 44/95 (46.32%), Postives = 52/95 (54.74%), Query Frame = 0

Query:  437 LMFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGAR 531
            L FPG L  L  LK RG+RLCAITNGN D + I      FEFC  AE+VGARK    P++ A  +A   E         WVH+GDD   D   A+
Sbjct:  137 LFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGEGVG----KRWVHIGDDFSEDILAAK 227

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BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: D8LL24_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL24_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 3.580e-9
Identity = 45/98 (45.92%), Postives = 52/98 (53.06%), Query Frame = 0

Query:  410 LHPSPIHLTALRREAIRRVLAEAAGAA----------------------LMFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQV 485
            L P+P++LT LR+  + R   E  G A                       +FPGVL TL  LK RGVRL AITNGNA T  IPCL + FEFC  AEQV
Sbjct:   25 LDPAPVNLTGLRKAGLARA-CELTGVADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQV 121

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BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A812RYL2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812RYL2_9DINO)

HSP 1 Score: 66.2 bits (160), Expect = 7.490e-9
Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 0

Query:  438 MFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPP 543
            +FPG L  + +LK++GV +  +T+GNA+  TI  L +  +F   A + GA KPD   F          ES A  G  E V VGD+   D EGA   G R + +RPP
Sbjct:   51 LFPGALDAIRSLKSKGVSIGTLTDGNANPFTIDGLKDVIDFAVNAVEAGAPKPDRRMFALC-------ESKAGLGPEEMVMVGDNPAKDVEGALDAGWRAIWVRPP 149

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BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A1Q9C9N0_SYMMI (Flavin mononucleotide phosphatase YigB n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9C9N0_SYMMI)

HSP 1 Score: 63.9 bits (154), Expect = 4.570e-7
Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 0

Query:  438 MFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPP 543
            +FPG L  + +LK++GV +  +T+GNA+  TI  L +  +F   A + GA KPD   F          ES A  G    V VGD+   D EGA   G R + +RPP
Sbjct:  101 LFPGALDAIRSLKSKGVSIGTLTDGNANPFTIDGLKDVIDFAVNAVEAGAPKPDRRMFALC-------ESKAGLGPEAMVMVGDNPAKDVEGALDAGWRAIWVRPP 199

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BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A1Y0H7V7_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium Uphvl-Ar2 TaxID=2004468 RepID=A0A1Y0H7V7_9BACT)

HSP 1 Score: 62.0 bits (149), Expect = 5.170e-7
Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 0

Query:  438 MFPGVLSTLAALKTRGVRLCAITNGNAD---TATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLI 540
            +FP  L TL ALK RGVR+  ++N +     T     + + FE    +  V + KPD G F  A  R        V+    W HVGDD + D +GAR+VGM ++LI
Sbjct:  124 LFPDTLPTLQALKERGVRMAVVSNWDISLDRTLRAFGIDQFFEVTVASMVVNSEKPDAGIFQHALGRL------GVESADVW-HVGDDAVADAQGARQVGMHSLLI 222

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BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A5A8D3F7_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D3F7_CAFRO)

HSP 1 Score: 59.7 bits (143), Expect = 5.430e-7
Identity = 42/98 (42.86%), Postives = 55/98 (56.12%), Query Frame = 0

Query:  446 LAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPP 543
            LAAL+  G+R+  +TNGNAD    P LA   +   +   VG+ KPD   F +A A+A      A+ G    +HVGDD   D  GARR GMR +L+ PP
Sbjct:    2 LAALRDGGLRVVTLTNGNADVEATP-LAGLVDASVSPALVGSAKPDRAMF-EAAAKA----GRAMAGST--LHVGDDPEADVRGARRAGMRAILVVPP 91

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BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: W7U0H4_9STRA (Hydrolase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0H4_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 6.870e-7
Identity = 46/132 (34.85%), Postives = 55/132 (41.67%), Query Frame = 0

Query:  437 LMFPGVLSTLAALKTRGVRLCAITNGNADTATI--------------------------------PC-----LAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGAR 531
            L FPG L  L  LK RG+RLCAITNGN D + I                                PC      +  FEFC  AE+VGARK    P++ A  +A   E         WVH+GDD   D   A+
Sbjct:  208 LFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGEGVG----KRWVHIGDDFSEDILAAK 335

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348064 vs. uniprot

BLAST of jgi.p|Trimin1|348064 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16


Match Name	E-value	Identity	Description
A0A835Z5K5_9STRA	0.000e+0	100.00	HAD-like domain-containing protein n=1 Tax=Tribone...	[more]
A0A6H5KPD2_9PHAE	8.730e-33	41.74	zinc_ribbon_2 domain-containing protein n=1 Tax=Ec...	[more]
A0A7S2WI27_9STRA	1.480e-20	48.08	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A4D9D955_9STRA	4.300e-12	46.32	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
D8LL24_ECTSI	3.580e-9	45.92	Haloacid dehalogenase-like hydrolase n=1 Tax=Ectoc...	[more]
A0A812RYL2_9DINO	7.490e-9	38.68	Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP...	[more]
A0A1Q9C9N0_SYMMI	4.570e-7	37.74	Flavin mononucleotide phosphatase YigB n=1 Tax=Sym...	[more]
A0A1Y0H7V7_9BACT	5.170e-7	37.74	Uncharacterized protein n=1 Tax=Armatimonadetes ba...	[more]
A0A5A8D3F7_CAFRO	5.430e-7	42.86	Uncharacterized protein n=2 Tax=Cafeteria roenberg...	[more]
W7U0H4_9STRA	6.870e-7	34.85	Hydrolase n=1 Tax=Nannochloropsis gaditana TaxID=7...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006439	HAD hydrolase, subfamily IA	PRINTS	PR00413	HADHALOGNASE	coord: 339..350 score: 34.72 coord: 449..462 score: 37.5 coord: 529..542 score: 36.31
IPR006439	HAD hydrolase, subfamily IA	TIGRFAM	TIGR01549	TIGR01549	coord: 451..534 e-value: 6.1E-7 score: 27.9
IPR023214	HAD superfamily	GENE3D	3.40.50.1000		coord: 342..547 e-value: 9.0E-29 score: 103.0
None	No IPR available	GENE3D	1.20.120.1600		coord: 353..434 e-value: 9.0E-29 score: 103.0
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 2..107 e-value: 1.3E-6 score: 29.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..268
None	No IPR available	PANTHER	PTHR43316	HYDROLASE, HALOACID DELAHOGENASE-RELATED	coord: 337..599
IPR041492	Haloacid dehalogenase-like hydrolase	PFAM	PF13419	HAD_2	coord: 437..539 e-value: 2.0E-8 score: 34.5
IPR036412	HAD-like superfamily	SUPERFAMILY	56784	HAD-like	coord: 339..560
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 25..66

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_19	contig	Contig_19:495710..504553 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348064	mRNA_5503	Tribonema minus UTEX_B_3156	mRNA	Contig_19 495607..504553 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|348064|estExt_Genemark1.C_Ctg_190056 ID=Trimin1|348064|estExt_Genemark1.C_Ctg_190056|Name=jgi.p|Trimin1|348064|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=612bp
MGAYEYTNLKSAKAFDEAIQAASRNLQAELPGRLSPDLAAFLLTALHLDA
RKRLSVADMLRHPWILRHAAAAALPPPPPSSQEQQQRSAHAHMLAQQPRR
DLTIDVPECNQERTERGDASAVSAVTADDGGGGGACDAAPCDLVVDSDDA
CPCTPPCDEDDGDDDNELDAASPQAVSPPYAAQEAALSAAQSLSMSHRAR
QLLPHGFHQPPDAPTTPSVGAMRDQFIHPGDALAHRLASGGPCTAPNTTS
PATSTSPGSYAPSPLGMSPTVSPVNSPLRAFFKGRRGGAAAATTTTDAAT
AVSDLSDQQAASSASAQQGALSSASGGQTCTAVRRAAAVKMISFDLDDTA
IFFAAAASAHIRGIWPTREVITRANDALAAHLRAIDPNIGSVPDAMRAVW
GEQRSADPSLHPSPIHLTALRREAIRRVLAEAAGAALMFPGVLSTLAALK
TRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYA
RARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPPHWAPAAP
PGATTVASDVHITAGPAAAVAAEQGESCVDCELGSFEELIGLVDRWNAEA
AALASGGSSAL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006439	HAD-SF_hydro_IA
IPR023214	HAD_sf
IPR041492	HAD_2
IPR036412	HAD-like_sf
IPR011009	Kinase-like_dom_sf