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Homology
BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A835Z5K5_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K5_9STRA) HSP 1 Score: 973 bits (2516), Expect = 0.000e+0 Identity = 611/611 (100.00%), Postives = 611/611 (100.00%), Query Frame = 1
Query: 1 MGAYEYTNLKSAKAFDEAIQAASRNLQAELPGRLSPDLAAFLLTALHLDARKRLSVADMLRHPWILRHAAXXXXXXXXXXXXXXXXRSAHAHMLAQQPRRDLTIDVPECNQERTERGDASAVSAVTADDGXXXGACDAAPCDLVVDSDDACPCTPPCDEDDGDDDNELDAASPQAVSPPYAAQEAALSAAQSLSMSHRARQLLPHGFHQPPDAPTTPSVGAMRDQFIHPGDALAHRLASGGPCTAPNTTSPATSTSPGSYAPSPLGMSPTVSPVNSPLRAFFKGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTCTAVRRAAAVKMISFDLDDTAIFFAAAASAHIRGIWPTREVITRANDALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHPSPIHLTALRREAIRRVLAEAAGAALMFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPPHWAPAAPPGATTVASDVHITAGPAAAVAAEQGESCVDCELGSFEELIGLVDRWNAEAAALASGGSSAL 1833
MGAYEYTNLKSAKAFDEAIQAASRNLQAELPGRLSPDLAAFLLTALHLDARKRLSVADMLRHPWILRHAAXXXXXXXXXXXXXXXXRSAHAHMLAQQPRRDLTIDVPECNQERTERGDASAVSAVTADDGXXXGACDAAPCDLVVDSDDACPCTPPCDEDDGDDDNELDAASPQAVSPPYAAQEAALSAAQSLSMSHRARQLLPHGFHQPPDAPTTPSVGAMRDQFIHPGDALAHRLASGGPCTAPNTTSPATSTSPGSYAPSPLGMSPTVSPVNSPLRAFFKGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTCTAVRRAAAVKMISFDLDDTAIFFAAAASAHIRGIWPTREVITRANDALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHPSPIHLTALRREAIRRVLAEAAGAALMFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPPHWAPAAPPGATTVASDVHITAGPAAAVAAEQGESCVDCELGSFEELIGLVDRWNAEAAALASGGSSAL
Sbjct: 1 MGAYEYTNLKSAKAFDEAIQAASRNLQAELPGRLSPDLAAFLLTALHLDARKRLSVADMLRHPWILRHAAXXXXXXXXXXXXXXXXRSAHAHMLAQQPRRDLTIDVPECNQERTERGDASAVSAVTADDGXXXGACDAAPCDLVVDSDDACPCTPPCDEDDGDDDNELDAASPQAVSPPYAAQEAALSAAQSLSMSHRARQLLPHGFHQPPDAPTTPSVGAMRDQFIHPGDALAHRLASGGPCTAPNTTSPATSTSPGSYAPSPLGMSPTVSPVNSPLRAFFKGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTCTAVRRAAAVKMISFDLDDTAIFFAAAASAHIRGIWPTREVITRANDALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHPSPIHLTALRREAIRRVLAEAAGAALMFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPPHWAPAAPPGATTVASDVHITAGPAAAVAAEQGESCVDCELGSFEELIGLVDRWNAEAAALASGGSSAL 611
BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A6H5KPD2_9PHAE (zinc_ribbon_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD2_9PHAE) HSP 1 Score: 144 bits (362), Expect = 1.190e-32 Identity = 96/230 (41.74%), Postives = 115/230 (50.00%), Query Frame = 1
Query: 1015 VKMISFDLDDTAIFFAAAASAHIRGIWPTREVITRANDALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LHPSPIHLTALRREAIRRVLAEAAGAA----------------------LMFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPP 1629
V+++SFDLDDT +WPT VI++AN AL L P+P++LT LR+ + R E AG A +FPGVL TL LK RGVRL AITNGNA T IPCL + FEFC AEQVG RKP PGPF A +A YP AV G EWVHVGDD +DC G +++ MRTVL+R P
Sbjct: 108 VEVVSFDLDDT--------------LWPTMTVISQANAALQEHLSREHPDLAEKYVIADLMKEIWKEKLVKNPELDPAPVNLTGLRKAGLARA-CELAGIADPTPVVESCFEVWRRARHDVERHLFPGVLDTLRELKGRGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQVGERKPQPGPFRAAVKKAGYPSEFAVGG--EWVHVGDDWASDCVGGKKMRMRTVLVRVP 320
BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A7S2WI27_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WI27_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.590e-20 Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 1
Query: 1312 MFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIR 1623
+FP VL L L+ +G+R+CAITNGNAD +P ++E FEF ++E+VGA KPDP PF A +A + WVHVGDD DC A+ +G RTV IR
Sbjct: 5 LFPEVLDCLRGLEAQGIRMCAITNGNADVYQVPPVSEFFEFSVSSEEVGAAKPDPLPFQRALEKA----GCTAEETSTWVHVGDDFKKDCAAAKSLGFRTVWIR 104
BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A4D9D955_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D955_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 4.720e-12 Identity = 44/95 (46.32%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 1309 LMFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGAR 1593
L FPG L L LK RG+RLCAITNGN D + I FEFC AE+VGARK P++ A +A E WVH+GDD D A+
Sbjct: 137 LFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGEGVG----KRWVHIGDDFSEDILAAK 227
BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: D8LL24_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL24_ECTSI) HSP 1 Score: 70.9 bits (172), Expect = 3.940e-9 Identity = 45/98 (45.92%), Postives = 52/98 (53.06%), Query Frame = 1
Query: 1228 LHPSPIHLTALRREAIRRVLAEAAGAA----------------------LMFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQV 1455
L P+P++LT LR+ + R E G A +FPGVL TL LK RGVRL AITNGNA T IPCL + FEFC AEQV
Sbjct: 25 LDPAPVNLTGLRKAGLARA-CELTGVADPTPVVESCFEVWRRARHDVERHLFPGVLDTLKELKERGVRLVAITNGNAQTDDIPCLKDLFEFCVLAEQV 121
BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A812RYL2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812RYL2_9DINO) HSP 1 Score: 66.2 bits (160), Expect = 8.000e-9 Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 1
Query: 1312 MFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPP 1629
+FPG L + +LK++GV + +T+GNA+ TI L + +F A + GA KPD F ES A G E V VGD+ D EGA G R + +RPP
Sbjct: 51 LFPGALDAIRSLKSKGVSIGTLTDGNANPFTIDGLKDVIDFAVNAVEAGAPKPDRRMFALC-------ESKAGLGPEEMVMVGDNPAKDVEGALDAGWRAIWVRPP 149
BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A1Q9C9N0_SYMMI (Flavin mononucleotide phosphatase YigB n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9C9N0_SYMMI) HSP 1 Score: 63.9 bits (154), Expect = 4.990e-7 Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 1
Query: 1312 MFPGVLSTLAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPP 1629
+FPG L + +LK++GV + +T+GNA+ TI L + +F A + GA KPD F ES A G V VGD+ D EGA G R + +RPP
Sbjct: 101 LFPGALDAIRSLKSKGVSIGTLTDGNANPFTIDGLKDVIDFAVNAVEAGAPKPDRRMFALC-------ESKAGLGPEAMVMVGDNPAKDVEGALDAGWRAIWVRPP 199
BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A1Y0H7V7_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium Uphvl-Ar2 TaxID=2004468 RepID=A0A1Y0H7V7_9BACT) HSP 1 Score: 62.0 bits (149), Expect = 5.560e-7 Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 1
Query: 1312 MFPGVLSTLAALKTRGVRLCAITNGNAD---TATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLI 1620
+FP L TL ALK RGVR+ ++N + T + + FE + V + KPD G F A R V+ W HVGDD + D +GAR+VGM ++LI
Sbjct: 124 LFPDTLPTLQALKERGVRMAVVSNWDISLDRTLRAFGIDQFFEVTVASMVVNSEKPDAGIFQHALGRL------GVESADVW-HVGDDAVADAQGARQVGMHSLLI 222
BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: A0A5A8D3F7_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D3F7_CAFRO) HSP 1 Score: 59.7 bits (143), Expect = 5.780e-7 Identity = 42/98 (42.86%), Postives = 55/98 (56.12%), Query Frame = 1
Query: 1336 LAALKTRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPP 1629
LAAL+ G+R+ +TNGNAD P LA + + VG+ KPD F +A A+A A+ G +HVGDD D GARR GMR +L+ PP
Sbjct: 2 LAALRDGGLRVVTLTNGNADVEATP-LAGLVDASVSPALVGSAKPDRAMF-EAAAKA----GRAMAGST--LHVGDDPEADVRGARRAGMRAILVVPP 91
BLAST of jgi.p|Trimin1|348064 vs. uniprot
Match: W7U0H4_9STRA (Hydrolase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0H4_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 7.500e-7 Identity = 46/132 (34.85%), Postives = 55/132 (41.67%), Query Frame = 1
Query: 1309 LMFPGVLSTLAALKTRGVRLCAITNGNADTATI--------------------------------PC-----LAEAFEFCTTAEQVGARKPDPGPFLDAYARARYPESAAVDGCPEWVHVGDDVITDCEGAR 1593
L FPG L L LK RG+RLCAITNGN D + I PC + FEFC AE+VGARK P++ A +A E WVH+GDD D A+
Sbjct: 208 LFFPGALDLLQELKARGLRLCAITNGNCDISRIAAFEGECRRNARYVSPHLLLCENYISHTASFAPCPLSSYTSGVFEFCINAEKVGARKRTGRPYMAAIQQAGVGEGVG----KRWVHIGDDFSEDILAAK 335
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | Trimin1|348064|estExt_Genemark1.C_Ctg_190056 |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
| KEGG rclass | RC00017 |
| KEGG Reaction | R00548,R07280 |
| KEGG Module | M00125 |
| KEGG Pathway | ko00740,ko01100,ko01110,map00740,map01100,map01110 |
| KEGG ko | ko:K20862 |
| EC | 3.1.3.102,3.1.3.104 |
| GOs | GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0022611,GO:0032502,GO:0034641,GO:0042364,GO:0042578,GO:0042726,GO:0042727,GO:0043167,GO:0043169,GO:0043726,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 |
| Preferred name | yigB |
| Description | HAD-hyrolase-like |
| COG category | S |
| Max annot lvl | 1236|Gammaproteobacteria |
| EggNOG OGs | COG1011@1|root,COG1011@2|Bacteria,1N0I6@1224|Proteobacteria,1RQ41@1236|Gammaproteobacteria,1YFMB@136841|Pseudomonas aeruginosa group |
| Evalue | 1.88e-12 |
| Seed ortholog | 1149133.ppKF707_5262 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | HAD-like domain |
| Ec32 ortholog | Ec-27_000840.1 |
| TranscriptId | 348386 |
| Track | FilteredModels1 |
| ProteinId | 348064 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_5503 ID=mRNA_5503|Name=jgi.p|Trimin1|348064|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1939bp|location=Sequence derived from alignment at Contig_19:495607..504553- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGGGTGCCTACGAGTACACCAACCTCAAGAGCGCGAAGGCCTTCGACGA
GGCCATCCAGGCCGCCTCCAGGAACCTGCAGGCGGAGCTCCCCGGCAGGC
TGAGCCCTGACCTGGCGGCCTTCCTGCTCACCGCGCTGCACCTGGACGCG
CGCAAGCGGCTGAGCGTTGCTGACATGCTGCGCCACCCGTGGATCCTGCG
GCACGCGGCTGCAGCAGCGCTGCCGCCGCCGCCGCCGTCGTCGCAGGAGC
AGCAGCAGCGCTCGGCGCACGCGCACATGCTGGCGCAGCAGCCGCGGCGC
GACCTCACCATCGACGTCCCCGAGTGCAACCAGGAGCGCACCGAGAGGGG
CGACGCCAGCGCTGTGAGCGCTGTCACAGCGGACGACGGCGGCGGCGGCG
GCGCCTGTGACGCTGCGCCATGTGACCTCGTTGTCGACAGCGACGACGCG
TGTCCGTGCACGCCGCCGTGCGACGAGGATGACGGCGATGATGACAATGA
GCTGGATGCGGCGTCGCCGCAGGCGGTGTCGCCGCCGTACGCCGCGCAGG
AGGCCGCGCTGAGCGCTGCGCAGTCGCTCTCCATGAGCCACCGCGCGCGC
CAGCTGCTGCCGCACGGCTTCCACCAGCCGCCGGACGCGCCGACGACGCC
CAGCGTGGGCGCCATGCGCGACCAGTTCATACACCCCGGCGACGCGCTGG
CTCACCGGCTCGCGAGCGGAGGCCCATGCACGGCACCCAACACAACCTCG
CCCGCCACTTCAACTTCCCCTGGCAGTTACGCCCCCTCCCCCCTCGGCAT
GTCCCCCACAGTGTCCCCCGTCAACAGCCCGCTGCGCGCGTTCTTCAAAG
GGCGCAGGGGCGGCGCGGCTGCCGCGACCACCACGACGGATGCCGCAACC
GCTGTCAGTGACCTCAGCGATCAGCAAGCTGCCAGCAGTGCCAGTGCTCA
GCAAGGGGCATTGAGCTCCGCCTCCGGGGGTCAGACGTGCACTGCCGTCC
GACGAGCCGCGGCGGTGAAGATGATCTCTTTCGACCTGGACGACACGGCA
ATCTTCTTCGCCGCAGCAGCGTCCGCACACATTCGAGGGATATGGCCGAC
CAGGGAGGTGATCACGCGCGCCAACGACGCCCTCGCCGCGCACCTCCGCG
CCATCGATCCGAACATCGGCAGCGTCCCCGACGCCATGCGCGCCGTGTGG
GGGGAGCAGCGCTCAGCGGACCCCTCCCTTCACCCCTCGCCGATACACCT
CACGGCGCTGCGGCGGGAGGCGATACGGCGCGTGCTAGCGGAGGCGGCGG
GTGCGGCGCTGATGTTCCCGGGCGTGCTGAGCACGTTGGCGGCGCTGAAG
ACGCGTGGCGTGCGGCTCTGCGCCATCACCAACGGCAACGCCGACACCGC
CACGATACCGTGCCTCGCGGAGGCGTTTGAGTTCTGCACGACGGCGGAGC
AGGTGGGCGCGCGTAAGCCTGATCCAGGACCGTTCCTGGACGCATACGCA
CGAGCTCGGTACCCCGAGAGCGCTGCTGTTGACGGCTGCCCGGAGTGGGT
GCACGTAGGCGACGACGTCATCACCGACTGCGAGGGGGCGCGCCGCGTGG
GCATGCGCACAGTGCTCATCCGCCCCCCCCACTGGGCCCCTGCTGCTCCC
CCCGGTGCCACAACGGTCGCTTCCGATGTGCACATCACAGCCGGCCCCGC
CGCCGCGGTCGCAGCAGAGCAGGGAGAGTCTTGCGTCGATTGCGAACTTG
GCTCGTTTGAAGAGCTCATTGGTCTGGTAGACCGGTGGAATGCGGAAGCG
GCGGCGCTGGCAAGCGGCGGCAGCAGCGCATTATGAGTTGAAGATAGTTG
TTGAAGTACGCACTTGCTGCTATGGGCTCTGCTGCGCACGCTTGTGCACA
CAATTCTTGGGCTTGGCTGTACAGCTCTAGAGATCTGAG back to topprotein sequence of jgi.p|Trimin1|348064 >Trimin1|348064|estExt_Genemark1.C_Ctg_190056 ID=Trimin1|348064|estExt_Genemark1.C_Ctg_190056|Name=jgi.p|Trimin1|348064|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=612bp
MGAYEYTNLKSAKAFDEAIQAASRNLQAELPGRLSPDLAAFLLTALHLDA
RKRLSVADMLRHPWILRHAAAAALPPPPPSSQEQQQRSAHAHMLAQQPRR
DLTIDVPECNQERTERGDASAVSAVTADDGGGGGACDAAPCDLVVDSDDA
CPCTPPCDEDDGDDDNELDAASPQAVSPPYAAQEAALSAAQSLSMSHRAR
QLLPHGFHQPPDAPTTPSVGAMRDQFIHPGDALAHRLASGGPCTAPNTTS
PATSTSPGSYAPSPLGMSPTVSPVNSPLRAFFKGRRGGAAAATTTTDAAT
AVSDLSDQQAASSASAQQGALSSASGGQTCTAVRRAAAVKMISFDLDDTA
IFFAAAASAHIRGIWPTREVITRANDALAAHLRAIDPNIGSVPDAMRAVW
GEQRSADPSLHPSPIHLTALRREAIRRVLAEAAGAALMFPGVLSTLAALK
TRGVRLCAITNGNADTATIPCLAEAFEFCTTAEQVGARKPDPGPFLDAYA
RARYPESAAVDGCPEWVHVGDDVITDCEGARRVGMRTVLIRPPHWAPAAP
PGATTVASDVHITAGPAAAVAAEQGESCVDCELGSFEELIGLVDRWNAEA
AALASGGSSAL* back to topmRNA from alignment at Contig_19:495607..504553- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5503 ID=mRNA_5503|Name=jgi.p|Trimin1|348064|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8947bp|location=Sequence derived from alignment at Contig_19:495607..504553- (Tribonema minus UTEX_B_3156 )
ATGGGTGCCTACGAGTACACCAACCTCAAGAGCGCGAAGGCCTTCGACGA
GGCCATCCAGGCCGCCTCCAGGAACCTGCAGGCGGAGCTCCCCGGCAGGT
GAGCAGTGCTCCGCAGCACATTGTTGAAGTGAGATGTTGAAGTGTGATGG
TGGTGGTGTGGGTATGGCAGGGCACGCCCTGACCACCACCTTCCGCGGCA
CATTGTTGAGGCCATATGTTGAGGTGTCATGGAGGTGTTGTTAAGTATGA
CAGGACACGCACCTGACCACTACCCTGAGCGTCCACGCTGACCAGGGCAT
CGAAGCCGAACATGTCGCGCCCACACCTGCTGCTCTGCTCCGGAAGCGCT
GCGCTGCTGCCGAGGCGAGCACTCTTGAATCTGACTCATGAATCTGACTC
ATGAATTCGACCACCCCTGGCTCCGAGGTCCTGCAGGCTGAGCCCTGACC
TGGCGGCCTTCCTGCTCACCGCGCTGCACCTGGACGCGCGCAAGCGGCTG
AGCGTTGCTGACATGCTGCGCCACCCGTGGATCCTGCGGCACGCGGCTGC
AGCAGCGCTGCCGCCGCCGCCGCCGTCGTCGCAGGAGCAGCAGCAGCGCT
CGGCGCACGCGCACATGCTGGCGCAGGTGAGAAGTGGTGCCCTGATGCGG
GCAGGACTTGTGCTTTGCACTGGCTAGTGCGTGGTTTTTGACGATAACGC
GAACACATGCAGCTGCTTTCTGCAGTTAGGGCGTACTCCTGCAACTGCTT
CTCTGGAACGGCCATCCTCTAGCCAACTGCACGCTTGATACCATCAGGAC
CCCTCCCCCGCCCCCCCCCCCCCCCCCACCCGCAGTGCGCTCGCATACCT
GCCTACCCTTGCTGCGCCTGACACTGAGCGCTGCCCCCGCTGCTCCCCCC
TTCCCCCCCCACAGCAGCCGCGGCGCGACCTCACCATCGACGTCCCCGAG
TGCAACCAGGAGCGCACCGAGAGGGGCGACGCCAGCGCTGTGAGCGCTGT
CACAGCGGACGACGGCGGCGGCGGCGGCGCCTGTGACGCTGCGCCATGTG
ACCTCGTTGTCGACAGCGACGACGCGTGTCCGTGCACGCCGCCGTGCGAC
GAGGATGACGGCGATGATGACAATGAGCTGGATGCGGCGTCGCCGCAGGT
GCGTCACAATTGAAGTAGTTGGGCCGAAGTGGGTGCGCACGCGCACGCCT
CGGCCGTCGCGTCGCAGCCACCAAGTGCCTTGCCCACCGGGGCTGATGTA
GCTTCAGCGTCTTTGCAGGGATGGGACGCGCTGCGCACAAGCCCTGCTGC
GAAGACACTGCCGACAAAGAGCGCTCGCCATCAGTGCCACCACACGCGCG
TGTGCGCCTGATGTCTCTGCCGAGCGCTGCTGCCGCACTTCAACACCCAC
ACACACACATCAGAGCTCGCCCTTCACTGCGGCGCTCCACCCATGACACC
GTCGCTCACGCGCCTCACTCTGCGCCGCGCTGTCGCCCCCCCCCCCCACA
GGCGGTGTCGCCGCCGTACGCCGCGCAGGAGGCCGCGCTGAGCGCTGCGC
AGTCGCTCTCCATGAGCCACCGCGCGCGCCAGCTGCTGCCGCACGGCTTC
CACCAGCCGCCGGACGCGCCGACGACGCCCAGCGTGGGCGCCATGCGCGA
CCAGTTCATACACCCCGGCGACGCGCTGGTGAGTCAGCCGTTGAAGTTTT
GGTTGAAGATTTGAATTGTTTCTTTTCGTATGCCCGGTTGGCGTGCGTGT
GCATGAGAGTCTAGCTTGTGGCGCTTCCAGGATGAGTTGAATGTGTGCCA
TCTAGGGTGTGCGGTCACACTGTACAGGCTGTTTGTTCAGAGGTAGGCTG
ACCCCAAACTTCAAGCCTGTAGTGCTTAGCGCTGGCGCCACACATCGTGG
GCAGTCCCTGACAGCCTCAGCCTTGCAAGGGTGAGTGAGGGGACACACTC
AGAGGCTGAAACGTGAACGCCAAGTCTGGGCCGTGCATATGGCGCGCGTG
CTCATATAATAGCGTTTGAGCCATTTTCATTGTTCAGTGCTGGGTGCCAG
GTGTTGCTGCCGCCACCACTTAACTTCAACTCACCATCATCAACTTCAAT
TCTCTGCTGTGCGCAGGCTCACCGGCTCGCGAGCGGAGGCCCATGCACGG
CACCCAACACAACCTCGCCCGCCACTTCAACTTCCCCTGGCAGTTACGCC
CCCTCCCCCCTCGGCATGTCCCCCACAGTGTCCCCCGTCAACAGCCCGCT
GCGCGCGTTCTTCAAAGGGCGCAGGTAACCACTAGGTGTGTGTGCCAATC
AACCCCCTGATGTGTGGTGTTCAGGCATGTCGCTTGATGCACTGGCCGCT
TGTGATGCAATCTGCGTATTGAGAGTGTGGTTGAAGCTGCATCTCAGTTG
CAATGGCGAAGGGGTGATACGCTGCCTGAAGTTGCATCTCAGTTGCAATG
GCAAATGGGTGATACACTGTGAGTCCGGCACTTCAATGCTCAGGGTGATT
GCGACCTCTTCTATAGATTGTTGTCAACGCCTGTGTGTCGTGAATCATGC
CTTGCTGCGGCTTCCGCCATCAGACTACATATGCAGAGCTAGCTTGCACC
GCATACTTCACAGCACAACTGCAGCGCTCGGATGCTCTGGAGCCACACTG
ACCCCCAACCCCCCCCCCCTCCTGTGTGTCATCTGCTCAGCACTGGAGCC
CGGACCGCCACGCCCGACACCAAGAGCAAATCCACATCACCAAACTGCAA
CGCGGGAGCATGACACTTCAACATTGCTGTGCTGCTGCGCCGCTTTCAAC
ATTGCGGGCCATGCAGCTGCTGCAAAAACGAACTCTGCCCATCTGCGTCC
TGGCGCACGCTAGAGACTGTAGACTTCAAGTCAAACTTCAAGTGTGACAT
CCGAGCCTTCTCGTCAGTGAGCTGGAAAAAGGGGGGCGCGCGTGTACTGC
AATGCGGGACACCAAAGGGGGAGTTGAAGTTGCTGGAACTGTGGCCTGAT
TCTCTGAGGGTACGGGCGGGATGGACCTCAGAGACCTGCGGTCAGGGTTT
GGAGAGCGTTCCTAGCCCTAGTGCTACCGTGTCGTTGTACGTTTAGGGCG
CTGGCTGTACAAACCTGCAGCTTAGAAACGGAATTATAACGCAACACGCC
GGGGATTGCCCGGCTGGGACGATTGTTACCGCACGACTATACGTAATAAG
GTTTCGCTGCTTTCGCCACACATCACTCTCCACTTGCTCTTCAGTGCTGT
TTCTTCCATCCATGCGCAAGGCGTGATGTCCGCAGATTTAAGCTCTGGAT
GATGTCGCTGTTTGTGAATTTTTGATGTGTTTTGTGGGAGTTTGCGGTGT
TCATGTGGTGTGCTTGACCATCCCTGCTTGTCCTTCTCTTCGGTCATGCT
TTTCAAAAGCAGCTTTTGTAGCACCTGGACGCAGGGAGGGATGGTCTGCC
ATCCAACTTGTATCATTGTCCCCCTTCAGTCCCTATGTGGCACGGTTTCA
GTTTGATCCATGTTTGCGGGCAAGTGCGCATCAAGTCAAGCGCGGTAGCT
ACATACATGCTGTTACACATGCCCAAATGCATCATCAAAGCATTCCCTCA
CCAACTCAATCTTGGTGTCTCAAAATGTGCAGGCTGAGGGTCTGTGTAGT
GCTCGCTAGCGCATTGTCAAAACATCATGGTGCTCCATACTCTGCCCCGT
GTTGTAGGCGAACAACCAGTATATATAGCTTTTCTTGTGCACTGTAGCCA
TGTCCCCTGGAAGATGTACACTGTAAATGGGTTTGCTGTCAGGAATGATG
TACGATCTCCCTTCACAATATCACTTTGGCTCATGTAGTGGGCGGAGCAC
TCTTCCTGGGTTTTGGCCACGTAGTGGTAAATTTGTACAGTAGGCACGAC
CACAGTCATACTGCTAGCCGAGAGCACTGGCAATCGCAGAATCACAAAGG
GCTGGCAGGTTGCACGTGACTCCCATACCTCAAGCTAGCTCACCAGGACT
GATTTCTAGGCAGCCCCAACTTGTCCATGTGATACATCGTTGGAGAATCA
TCATCAGTGAATTTTGGAATGAAGATGTGTGTATGCAAATGTTTTCACTG
AAACTTTTCAGGTTTCCAGGACTTGAAGTGGGCGAGTCCTCCTTTCGCAT
CTTGAACTCACTGTGAGAAAGCCTGCTGTACAGCTGTGTGACAGCGTGGG
TCATGCAGGACTGATGACTGTTGTGCGATGCACAAGATCAAGGGTCGCTG
CATGGTGCTGCTGGTGCTGAGGCTCTCCTGCACCTTCACATCCCTGCCAG
CATTTCAGCATTGGCGAGCGTTTGCATCTACGACGCTTGGTCAGAATAGC
AGGGCACACAGAAGTAGAATGACAAAGGCCTTGACACCTCGGCTGAAGCA
CTGCGACAGCACTTTCGGCGAGCAGAGCGGCGGCAGTGGCGCTTGGGGAG
GTGACTCGTATTGGGGGTACGTGGGAACATGCACCTTTGTACGGTTATTG
TGCCTGCAGGTCCTTTTGGCCTAGATGAGGTCGCCCTTTTCAAACTTGTG
CATCGCCTTGTCGTTCTTGAAGACCTCGGCTTTGTCAATGATCCTCATCA
TGTGTATTTCCTCCCACATTGCATGTTGAAGTTAGTATCCTTCTTATTCG
GGTGGCACGTGCCCTTTGCGCTCTTGAACATTATCTGGCACTGCAATCGC
AAGCGCCGCGGAAAGCGGCGCAACTGAGCACTACGTGCCACGGTGTCCAC
ATGCGTGGATTCTGGTCGCCACAATGGAGTGCATGTGGCCGGTGCCATGG
ACACCATTATCATCAACCTCGTGAGTCCAGTCCAGACCATATTCTGGCTG
TGCCATTGCAAAGTAAAGCGCAAGCTGACAGCAAACTTCAGCGCCGTGAC
ACCCCTCACTGCTCCGGCTGTCACAGGGGCGGCGCGGCTGCCGCGACCAC
CACGACGGATGCCGCAACCGCTGTCAGTGACCTCAGCGATCAGCAAGCTG
CCAGCAGTGCCAGTGCTCAGCAAGGGGCATTGAGCTCCGCCTCCGGGGGT
CAGACGTGCACTGCCGTCCGACGAGCCGCGGCGGTGAAGATGATCTCTTT
CGACCTGGACGACACGGCAAGTGGCGCGCGCTACGACACTTCACCACTTT
GTTGAACTGGAACACTTGACCAAGCTGAAGTTGTTGAATGTCACAGCAGC
GCTGCGCCGGCTGTTGGGCGGCAATGCGCGCGCGCCGCCGTTCGTCAAAT
TGCGGCGGCAGAGATTACCCGTACGACACAGCAAATCCTCCTCGCTGTAC
AGATTGTTGCCTAACCCTAACCCTAACCTAACCCTAAGGTTGTTGAGTTG
AAGGCGTAGTCAGCGGCGCGGAGCTGATCCTGATGCCGGTGGCTCAGCAC
TGAGGAGTAGGCACGGGACCTCTGCTGCCATCTTGCGCGTGCGCAGAAGA
AGCTGCGACATTCAGTGAGCGCCGCCACGGGCGTCACCGCTCGCCGTCTA
TACTTCAAGTTGTATGCGCTACGACTTCAATCGGCGAGTGCTCAGCACCA
TGCTAAGCGGGCGTGCGTAGATCATGTCGCGCTTGCCTATGGCCCGGCAC
TCTGGTGGTCAACATACACGTAAAGACCACTCAACAACCCATGGAGGAGC
TCCCCGCTGCTGTTGCAACTCGCGGCTCACTGAAGCAAACGCCGAGCTGT
GCAGTCTTCTTCGCCGCAGCAGCGTCCGCACACATTCGAGGGGTGCAGCA
CAGCCCACAAAAGCTACCTATACATACCCCTATACATACCCCTATACATA
CCCCTGTACATACCTACCATGATAACTGACGCTGCGCGCTTCTGTCCGCC
TGCGCGCGTGCGCGCCGCAGATATGGCCGACCAGGGAGGTGATCACGCGC
GCCAACGACGCCCTCGCCGCGCACCTCCGCGCCATCGATCCGAACATCGG
CAGGTGCGTCGTAACGACCGACTGCTGCAGCAGCGCTCAACCGCAGTGCT
AACAGCTGCAGTGCTCAATCGCTGCGCTCAAAGGCTGTTAATCTCGTTGC
AATGCAGAGAGCTGCTCTGCTCACTAGCCTGTTCGGTCCACGCTGCCAGA
GGTAGACAACCAGGTGACCGATGCGGCAGAAGACCGACGCCAGTCGTGCG
CTGCTAGAAGTTTCATATCGCTAATCTACTTTCCGCCCGACACGCGCTCA
CGCGCCTGCCGTGCTCGCTGCCGCCGCGCCCCCGCTGCGCAGCGTCCCCG
ACGCCATGCGCGCCGTGTGGGGGGAGCAGCGCTCAGCGGACCCCTCCCTT
CACCCCTCGCCGATACACCTCACGGCGCTGCGGCGGGAGGCGATACGGCG
CGTGCTAGCGGAGGCGGCGGGTGCGGTGGCGGGGGAAGGGGGGTTGGGGG
GGAGGGGGACGAGGGGGGGGTGGCAGCGGCGGCGGGGGCCGCGTTTGAAG
TTTGGTTTGCGGCGCGAAACGACGTCGAGGCGCTGATGTTCCCGGGCGTG
CTGAGCACGTGAGTGCAGAGCGCTGCCCTTTTATTGAAGTATGTTGTTGA
AGTTGTTGATGCGCCGCTCGCTGTCGGGGGTTGGGGATTAGGGTATGCGC
TGCACTTGCACAAGCGCGCCAACTGTGACGTCGGCCAAGTTCAGTTATGG
CTGATCACGGCGTGCGTCGTATGTGTGTCCATCGCCGTTGCGTCGTGCGA
CACTGCGTGACTTCTGGTGCAGCGCGCGGGCGTGGGCTGGGTGCAGCTCA
ATTGATTCATGATATGTCAACCTGTCTCTCTATGTCAACTCGTTTCTCTA
TGTCAAACTTCAGTGGTGCGCGCTTTGTGCGCGCAATAACAGTGGTAAGC
ACGGGGTCACACATGTTCTGCGAGCACAGCGACAATGCGCCTTGGGTTCC
CTGTGAGCATGATCAGGGCACCAGACAAACGAATTCTGCAAGTATTGTTA
GTGCTCAGTATCACTGCCTGGTGTGTTTCGCGCTCTGCGAATGAAGGCCA
TCTCATCCTCTTGCAGTCTCCATGAGCAGAGTCTTCGCACTGACTGAGAG
GCGGACTGTGCGATGCAACGCAGAGAGCTGGTGCTTGCTAACGTGTTGCT
GTATACCGCCAGAGGTAGACATCGAGGTGGCCAATGCAACAGGAGACCGA
CGCCAGCCGTGCGCTGCTGGAAGTGAGGAAGTATCATTCATCCAGTAAGT
GTGGTGATCGTCAAGCGTGCGAATGAGCATGTAGATGCCATATGCGCCTG
TGTAGAGAGCCTTGCGCGTCGGCGCTGCGCAACACGCGCATTGGCGGCCA
ATGACAGCGTGCGCTTCCCCGCGCGCACACGCGAGCGCGAGCGATGCGCT
CTGAGTGCGGTGCGCGCAGCACATCGCGCTCCCAACACATGCTCCGCATA
AACTTCAACTTCAACTTGATGTTTGCAGGTTGGCGGCGCTGAAGACGCGT
GGCGTGCGGCTCTGCGCCATCACCAACGGCAACGCCGACACCGCCACGAT
ACCGTGCCTCGCGGAGGCGTTTGAGTTCTGCACGACGGCGGAGCAGGTGC
GCGCGTCTGCGACGGCGCAACTGACGCAACTGACGTAACCGCTCGGCTGC
AGCACATGTTGCGCGTAATTCGTCATGTGATCGGCGGTGTCCGCAACACA
GGGGGGTAACAGTGGCAAACACTTTGTTGAGCTGCTTTTGGCACTTCGTA
TTCAATAGAGACGCTCTGTCCAGCCCACCGCAACTGTTCCACTCTTCAAT
GTCATTGATTGCGTGCATGCTCTACTTGCGTGGGAGACAACATAGCATAG
AATCGGCAATGGCTTGCGCCTGGCACAGTACGCGGCTCACCATTGTGGGG
CACCCATGATCCAGGCGTATGTTGCCGCCACTGGTATACCTACCGCTTCC
TGCCGCACAAACTTCACGTCCCCAACCTCAACCCCTGCGTGCATGCGCTC
TGTCGTTGCCACGCGACAGGTGGGCGCGCGTAAGCCTGATCCAGGACCGT
TCCTGGACGCATACGCACGAGCTCGGTACCCCGAGAGCGCTGCTGTTGAC
GGCTGCCCGGAGTGGGTGCACGTAGGTGAGTGGCCGTGCTCACTGCTCGG
TGCGTGCCGGCGTTGGCGTCTTCAGGAGCTGAGGATTAGGGTTTGGTTTT
CCTAGCCCTAACCCTAAATTAGGGTTAGGGTTAGGGATCAGTTCTCTGAC
CCCAACCCTAGTTAGTGCGTGCTCGCACGTCGCAGCTCTTCCTCAAATGC
AGGCAGCAGCACGAGCACGTGTGGTAGCGCTGCGCCGTCACCCTGGCAAA
TGCGCAGACGCTTCTGCAGAAGTAGCAGCCATTGTCCGCCCTCGATTTGT
GCCGCTGGTGCAGCAAGACCTGTGCTTTGCACACGCACTTTTCTGCAGAT
GCTTGAAGTGAGCTTTGTTGTGCCGCAAGCGAGGGTGAACAGAAAGTACA
GGGCACAGGAACGACCAAAACGCGTCAAATGCTCCAACGCCACTTCACTG
CCACCTCTCTGTCATACTTGAAGTAACAGTCTCAAAGCCCCCCCCCCTTC
CCCCGCTTTCCCCCAGGCGACGACGTCATCACCGACTGCGAGGGGGCGCG
CCGCGTGGGCATGCGCACAGTGCTCATCCGCCCCCCCCACTGGGCCCCTG
CTGCTCCCCCCGGTGCCACAACGGTCGCTTCCGATGTGCACATCACAGCC
GGCCCCGCCGCCGCGGTCGCAGCAGAGCAGGGAGAGTCTTGCGTCGATTG
CGAACTTGGCTCGTTTGAAGAGCTCATTGGTCTGGTAGACCGGTGGAATG
CGGAAGCGGCGGCGCTGGCAAGCGGCGGCAGCAGCGCATTATGAGTTGAA
GATAGTTGTTGAAGTACGCACTTGCTGCTATGGGCTCTGCTGCGCACGCT
TGTGCACACAATTCTTGGGCTTGGCTGTACAGCTCTAGAGATCTGAG back to topCoding sequence (CDS) from alignment at Contig_19:495607..504553- >mRNA_5503 ID=mRNA_5503|Name=jgi.p|Trimin1|348064|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1836bp|location=Sequence derived from alignment at Contig_19:495607..504553- (Tribonema minus UTEX_B_3156 )
ATGGGTGCCTACGAGTACACCAACCTCAAGAGCGCGAAGGCCTTCGACGA
GGCCATCCAGGCCGCCTCCAGGAACCTGCAGGCGGAGCTCCCCGGCAGGC
TGAGCCCTGACCTGGCGGCCTTCCTGCTCACCGCGCTGCACCTGGACGCG
CGCAAGCGGCTGAGCGTTGCTGACATGCTGCGCCACCCGTGGATCCTGCG
GCACGCGGCTGCAGCAGCGCTGCCGCCGCCGCCGCCGTCGTCGCAGGAGC
AGCAGCAGCGCTCGGCGCACGCGCACATGCTGGCGCAGCAGCCGCGGCGC
GACCTCACCATCGACGTCCCCGAGTGCAACCAGGAGCGCACCGAGAGGGG
CGACGCCAGCGCTGTGAGCGCTGTCACAGCGGACGACGGCGGCGGCGGCG
GCGCCTGTGACGCTGCGCCATGTGACCTCGTTGTCGACAGCGACGACGCG
TGTCCGTGCACGCCGCCGTGCGACGAGGATGACGGCGATGATGACAATGA
GCTGGATGCGGCGTCGCCGCAGGCGGTGTCGCCGCCGTACGCCGCGCAGG
AGGCCGCGCTGAGCGCTGCGCAGTCGCTCTCCATGAGCCACCGCGCGCGC
CAGCTGCTGCCGCACGGCTTCCACCAGCCGCCGGACGCGCCGACGACGCC
CAGCGTGGGCGCCATGCGCGACCAGTTCATACACCCCGGCGACGCGCTGG
CTCACCGGCTCGCGAGCGGAGGCCCATGCACGGCACCCAACACAACCTCG
CCCGCCACTTCAACTTCCCCTGGCAGTTACGCCCCCTCCCCCCTCGGCAT
GTCCCCCACAGTGTCCCCCGTCAACAGCCCGCTGCGCGCGTTCTTCAAAG
GGCGCAGGGGCGGCGCGGCTGCCGCGACCACCACGACGGATGCCGCAACC
GCTGTCAGTGACCTCAGCGATCAGCAAGCTGCCAGCAGTGCCAGTGCTCA
GCAAGGGGCATTGAGCTCCGCCTCCGGGGGTCAGACGTGCACTGCCGTCC
GACGAGCCGCGGCGGTGAAGATGATCTCTTTCGACCTGGACGACACGGCA
ATCTTCTTCGCCGCAGCAGCGTCCGCACACATTCGAGGGATATGGCCGAC
CAGGGAGGTGATCACGCGCGCCAACGACGCCCTCGCCGCGCACCTCCGCG
CCATCGATCCGAACATCGGCAGCGTCCCCGACGCCATGCGCGCCGTGTGG
GGGGAGCAGCGCTCAGCGGACCCCTCCCTTCACCCCTCGCCGATACACCT
CACGGCGCTGCGGCGGGAGGCGATACGGCGCGTGCTAGCGGAGGCGGCGG
GTGCGGCGCTGATGTTCCCGGGCGTGCTGAGCACGTTGGCGGCGCTGAAG
ACGCGTGGCGTGCGGCTCTGCGCCATCACCAACGGCAACGCCGACACCGC
CACGATACCGTGCCTCGCGGAGGCGTTTGAGTTCTGCACGACGGCGGAGC
AGGTGGGCGCGCGTAAGCCTGATCCAGGACCGTTCCTGGACGCATACGCA
CGAGCTCGGTACCCCGAGAGCGCTGCTGTTGACGGCTGCCCGGAGTGGGT
GCACGTAGGCGACGACGTCATCACCGACTGCGAGGGGGCGCGCCGCGTGG
GCATGCGCACAGTGCTCATCCGCCCCCCCCACTGGGCCCCTGCTGCTCCC
CCCGGTGCCACAACGGTCGCTTCCGATGTGCACATCACAGCCGGCCCCGC
CGCCGCGGTCGCAGCAGAGCAGGGAGAGTCTTGCGTCGATTGCGAACTTG
GCTCGTTTGAAGAGCTCATTGGTCTGGTAGACCGGTGGAATGCGGAAGCG
GCGGCGCTGGCAAGCGGCGGCAGCAGCGCATTATGA back to top
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