mRNA_5455 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|34996
Unique NamemRNA_5455
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|34996 vs. uniprot
Match: A0A836CI33_9STRA (PDZ_6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI33_9STRA)

HSP 1 Score: 279 bits (714), Expect = 4.050e-92
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 2
Query:   71 MAQLEAALHSLHAIELSKASVAPEPGPAPADARSVLSTADQRSAXXXXXXXXXXXXXXXXXXXXXXXPPVAASGREADAQQLAPTTAPFARVNTVAPESPAALSGLLPGDRLVAFGRVTASNHNGLSALVSAVRDSVNAPLTLWVQRDGSAQLLALRLTPRAWAGQGLLGCHILPL 598
            MAQLEAALHSLHAIELSKASVAPEPGPAPADARSVLSTADQRSAXXXXXXXXXXXXXXXXXXXXXXXPPVAASGREADAQQLAPTTAPFARVNTVAPESPAALSGLLPGDRLVAFGRVTASNHNGLSALVSAVRDSVNAPLTLWVQRDGSAQLLALRLTPRAWAGQGLLGCHILPL
Sbjct:    1 MAQLEAALHSLHAIELSKASVAPEPGPAPADARSVLSTADQRSAXXXXXXXXXXXXXXXXXXXXXXXPPVAASGREADAQQLAPTTAPFARVNTVAPESPAALSGLLPGDRLVAFGRVTASNHNGLSALVSAVRDSVNAPLTLWVQRDGSAQLLALRLTPRAWAGQGLLGCHILPL 176          
BLAST of jgi.p|Trimin1|34996 vs. uniprot
Match: A0A7S2WPH7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPH7_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.250e-23
Identity = 71/209 (33.97%), Postives = 103/209 (49.28%), Query Frame = 2
Query:    5 DIFTIRHQRHRLACIQTDHKALMAQLEAALHSLHAIELSKASVAPEPG--PAPADARSVLSTADQRSAXXXXXXXXXXXXXXXXXXXXXXXPPVAASGREADAQQLAPTT----APFARVNTVAPESPAALSGLLPGDRLVAFGRVTASNHNGLSALVSAVRDSVNAPLTLWVQRDGSAQLLALRLTPRAWAGQGLLGCHILPL*ALLP 613
            D++ +RH+RHRLAC++TDH  +M ++E +LH+LHA          EP   P P     + S  +Q S                             SG  + + QL  ++    APFAR+  V   SP++L G+  GD L+ FG VTA NH  L  L   V   V   + + V+R G  +   LR+TP  W G+G+LGCH LP  +++P
Sbjct:   72 DVYNVRHKRHRLACLRTDHSTVMREIERSLHALHAATTGGVGGTEEPLDIPGPHGEAEIGSGRNQASRGSNTAPE--------------------VSGTASSSPQLRQSSPAFIAPFARIGEVTGGSPSSLGGIREGDELLEFGTVTAHNHRDLHGLADFVAGHVGQEVHVVVRRQGVVK--ELRITPARWTGRGVLGCHFLPAPSVVP 258          
BLAST of jgi.p|Trimin1|34996 vs. uniprot
Match: A0A8C2UCZ0_COTJA (26S proteasome non-ATPase regulatory subunit 9 n=1 Tax=Coturnix japonica TaxID=93934 RepID=A0A8C2UCZ0_COTJA)

HSP 1 Score: 103 bits (256), Expect = 4.100e-23
Identity = 73/198 (36.87%), Postives = 98/198 (49.49%), Query Frame = 2
Query:    5 DIFTIRHQRHRLACIQTDHKALMAQLEAALHSLHAIELSKASVAPEPGPAPADARSVLSTADQRSAXXXXXXXXXXXXXXXXXXXXXXXPPVAASGREADAQQLAPTTAPFARVNTVAPESPAALSGLLPGDRLVAFGRVTASNHNGLSALVSAVRDSVNAPLTLWVQRDGSAQLLALRLTPRAWAGQGLLGCHILPL 598
            D++ +R  RH +AC+Q DHKALM Q+E ALH LHA E  K                    A+ R+                                EA +Q L PT   FA+VN V PESPA+++GL   D +V FG V A+N   L  + + V+ S   PL++ V R+G    + L LTP+ WAG+GLLGC+I PL
Sbjct:   42 DLYQVRTARHNIACLQNDHKALMKQVEEALHQLHAREKEK---------------HARDEAEARA--------------------------------EAMSQNL-PTA--FAKVNVVTPESPASIAGLQVDDEIVEFGSVNANNFKSLQNIATVVQHSEGRPLSVTVIRNGKQ--VHLGLTPKRWAGKGLLGCNITPL 187          
BLAST of jgi.p|Trimin1|34996 vs. uniprot
Match: A0A669PV29_PHACC (PDZ domain-containing protein n=9 Tax=Phasianidae TaxID=9005 RepID=A0A669PV29_PHACC)

HSP 1 Score: 103 bits (256), Expect = 6.380e-23
Identity = 72/198 (36.36%), Postives = 95/198 (47.98%), Query Frame = 2
Query:    5 DIFTIRHQRHRLACIQTDHKALMAQLEAALHSLHAIELSKASVAPEPGPAPADARSVLSTADQRSAXXXXXXXXXXXXXXXXXXXXXXXPPVAASGREADAQQLAPTTAPFARVNTVAPESPAALSGLLPGDRLVAFGRVTASNHNGLSALVSAVRDSVNAPLTLWVQRDGSAQLLALRLTPRAWAGQGLLGCHILPL 598
            D++ +R  RH +AC+Q DHKALM Q+E ALH LHA E  K                    A+ R+                                EA +Q L P    FA+VN V PESPA+ SGL   D +V FG V   N   L  + + V+ S   PL++ V R+G    + L LTP+ WAG+GLLGC+I+PL
Sbjct:   60 DLYQVRTARHSIACLQNDHKALMKQVEEALHQLHAREKEK---------------HARDEAEARA--------------------------------EAMSQSLPPA---FAKVNAVTPESPASTSGLQVDDEIVEFGSVNVHNFKSLQNIATVVQHSEGRPLSVTVIRNGKK--VHLGLTPKRWAGKGLLGCNIIPL 205          
BLAST of jgi.p|Trimin1|34996 vs. uniprot
Match: F1NVH4_CHICK (PDZ domain-containing protein n=4 Tax=Galliformes TaxID=8976 RepID=F1NVH4_CHICK)

HSP 1 Score: 103 bits (256), Expect = 6.380e-23
Identity = 72/198 (36.36%), Postives = 95/198 (47.98%), Query Frame = 2
Query:    5 DIFTIRHQRHRLACIQTDHKALMAQLEAALHSLHAIELSKASVAPEPGPAPADARSVLSTADQRSAXXXXXXXXXXXXXXXXXXXXXXXPPVAASGREADAQQLAPTTAPFARVNTVAPESPAALSGLLPGDRLVAFGRVTASNHNGLSALVSAVRDSVNAPLTLWVQRDGSAQLLALRLTPRAWAGQGLLGCHILPL 598
            D++ +R  RH +AC+Q DHKALM Q+E ALH LHA E  K                    A+ R+                                EA +Q L P    FA+VN V PESPA+ SGL   D +V FG V   N   L  + + V+ S   PL++ V R+G    + L LTP+ WAG+GLLGC+I+PL
Sbjct:   60 DLYQVRAARHSIACLQNDHKALMKQVEEALHQLHAREKEK---------------HARDEAEARA--------------------------------EAMSQSLPPA---FAKVNAVTPESPASTSGLQVDDEIVEFGSVNVHNFKSLQNIATVVQHSEGRPLSVTVIRNGKK--VHLGLTPKRWAGKGLLGCNIIPL 205          
BLAST of jgi.p|Trimin1|34996 vs. uniprot
Match: A0A7K9TBB2_9AVES (26S proteasome non-ATPase regulatory subunit 9 (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7K9TBB2_9AVES)

HSP 1 Score: 103 bits (256), Expect = 6.690e-23
Identity = 74/198 (37.37%), Postives = 94/198 (47.47%), Query Frame = 2
Query:    5 DIFTIRHQRHRLACIQTDHKALMAQLEAALHSLHAIELSKASVAPEPGPAPADARSVLSTADQRSAXXXXXXXXXXXXXXXXXXXXXXXPPVAASGREADAQQLAPTTAPFARVNTVAPESPAALSGLLPGDRLVAFGRVTASNHNGLSALVSAVRDSVNAPLTLWVQRDGSAQLLALRLTPRAWAGQGLLGCHILPL 598
            D++ +R  RH + C+Q DHKALM Q+E ALH LHA E  K   A +   A A+A S   +  Q                                               FARVN V P SPA++SGL   D +V FG V A+N   L  + S V+ S   PL++ V R G    + L LTPR WAG+GLLGC+ILPL
Sbjct:   60 DLYQVRTARHNIICLQNDHKALMKQVEEALHQLHAREKEKH--AKDEAEALAEAMSQNQSLPQA----------------------------------------------FARVNAVTPGSPASISGLQVDDEIVEFGSVNANNFQNLQNIASVVQHSEGRPLSVTVLRSGKK--VHLGLTPRRWAGKGLLGCNILPL 207          
BLAST of jgi.p|Trimin1|34996 vs. uniprot
Match: A0A7L1NPW7_RHICY (26S proteasome non-ATPase regulatory subunit 9 (Fragment) n=1 Tax=Rhinopomastus cyanomelas TaxID=113115 RepID=A0A7L1NPW7_RHICY)

HSP 1 Score: 102 bits (254), Expect = 1.310e-22
Identity = 73/198 (36.87%), Postives = 96/198 (48.48%), Query Frame = 2
Query:    5 DIFTIRHQRHRLACIQTDHKALMAQLEAALHSLHAIELSKASVAPEPGPAPADARSVLSTADQRSAXXXXXXXXXXXXXXXXXXXXXXXPPVAASGREADAQQLAPTTAPFARVNTVAPESPAALSGLLPGDRLVAFGRVTASNHNGLSALVSAVRDSVNAPLTLWVQRDGSAQLLALRLTPRAWAGQGLLGCHILPL 598
            D++ +R  RH +AC+Q DHKALM Q+E ALH LHA E  K +         A+AR+   + DQ                           P A                 FARVNTV P SPA++SGL   D +V FG V   N   L  + + V+ S   PL++ V R G    + L LTP+ WAG+GLLGC+I+PL
Sbjct:   60 DLYQVRTARHNIACLQNDHKALMKQVEEALHQLHAREKEKQAKDE------AEARAEAMSQDQNL-------------------------PQA-----------------FARVNTVTPGSPASISGLQVDDEIVEFGSVNVKNFQSLQNIATVVQHSEGRPLSVTVIRGGKK--VHLGLTPKRWAGRGLLGCNIVPL 207          
BLAST of jgi.p|Trimin1|34996 vs. uniprot
Match: A0A803VK46_FICAL (26S proteasome non-ATPase regulatory subunit 9 n=11 Tax=Passeriformes TaxID=9126 RepID=A0A803VK46_FICAL)

HSP 1 Score: 101 bits (251), Expect = 3.560e-22
Identity = 71/198 (35.86%), Postives = 96/198 (48.48%), Query Frame = 2
Query:    5 DIFTIRHQRHRLACIQTDHKALMAQLEAALHSLHAIELSKASVAPEPGPAPADARSVLSTADQRSAXXXXXXXXXXXXXXXXXXXXXXXPPVAASGREADAQQLAPTTAPFARVNTVAPESPAALSGLLPGDRLVAFGRVTASNHNGLSALVSAVRDSVNAPLTLWVQRDGSAQLLALRLTPRAWAGQGLLGCHILPL 598
            D++ +R  RH + C+Q DHKALM Q+E ALH LHA E  K                     D+  A                               EA  Q  +P  A FA+VN V+P SPA+LSGL   D +V FG V A+N   L  + + V+ S   PL++ V R G  + + + LTP+ WAG+GLLGC+I+PL
Sbjct:   60 DVYQVRTARHNIICLQNDHKALMKQVEEALHKLHAREKEK------------------HAKDEAEAMA-----------------------------EAMGQSQSPARA-FAKVNAVSPGSPASLSGLQVDDEIVEFGSVNANNFQNLQNIATVVQHSEGRPLSVTVIRGG--RRVHVGLTPKRWAGKGLLGCNIIPL 207          
BLAST of jgi.p|Trimin1|34996 vs. uniprot
Match: A0A851NV18_9GALL (26S proteasome non-ATPase regulatory subunit 9 (Fragment) n=1 Tax=Penelope pileata TaxID=1118817 RepID=A0A851NV18_9GALL)

HSP 1 Score: 100 bits (249), Expect = 6.940e-22
Identity = 70/198 (35.35%), Postives = 97/198 (48.99%), Query Frame = 2
Query:    5 DIFTIRHQRHRLACIQTDHKALMAQLEAALHSLHAIELSKASVAPEPGPAPADARSVLSTADQRSAXXXXXXXXXXXXXXXXXXXXXXXPPVAASGREADAQQLAPTTAPFARVNTVAPESPAALSGLLPGDRLVAFGRVTASNHNGLSALVSAVRDSVNAPLTLWVQRDGSAQLLALRLTPRAWAGQGLLGCHILPL 598
            D++ +R  RH +AC+Q DHKALM ++E ALH LHA +  K   A +   A A+A S                                            +Q L P    FARVN V PESPA+ SGL  GD +V FG V   N   +  + + V+ S   PL++ V R+G    + + +TP+ WAG+GLLGC+I+PL
Sbjct:   60 DLYQVRTARHNIACLQNDHKALMKEVEEALHQLHARDKEKH--ARDEAEARAEAMS-------------------------------------------HSQSLPPA---FARVNAVTPESPASTSGLQVGDEIVEFGSVNVHNFKNMQNIATVVQHSEGRPLSVTVIRNGKQ--VHMGVTPKRWAGKGLLGCNIIPL 207          
BLAST of jgi.p|Trimin1|34996 vs. uniprot
Match: A0A6J0H6F4_9PASS (26S proteasome non-ATPase regulatory subunit 9 n=58 Tax=Neognathae TaxID=8825 RepID=A0A6J0H6F4_9PASS)

HSP 1 Score: 100 bits (248), Expect = 9.690e-22
Identity = 71/198 (35.86%), Postives = 96/198 (48.48%), Query Frame = 2
Query:    5 DIFTIRHQRHRLACIQTDHKALMAQLEAALHSLHAIELSKASVAPEPGPAPADARSVLSTADQRSAXXXXXXXXXXXXXXXXXXXXXXXPPVAASGREADAQQLAPTTAPFARVNTVAPESPAALSGLLPGDRLVAFGRVTASNHNGLSALVSAVRDSVNAPLTLWVQRDGSAQLLALRLTPRAWAGQGLLGCHILPL 598
            D++ +R  RH + C+Q DHKALM Q+E ALH LHA E  K   A +   A A+A S   +  Q                                              PFARVN V P SPA++SGL   D +V FG V A+N   L  + + V+ S   PL++ V R G  + + + LTP+ WAG+GLLGC+I+PL
Sbjct:   60 DLYQVRTARHNIICLQNDHKALMKQVEEALHQLHAREKEKQ--ARDEAEALAEAMSQNQSLPQ----------------------------------------------PFARVNAVTPGSPASVSGLQVDDEIVEFGSVNANNFQNLQNVATVVQHSEGRPLSVTVIRGG--RRVHVGLTPKRWAGKGLLGCNIIPL 207          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|34996 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CI33_9STRA4.050e-92100.00PDZ_6 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S2WPH7_9STRA1.250e-2333.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8C2UCZ0_COTJA4.100e-2336.8726S proteasome non-ATPase regulatory subunit 9 n=1... [more]
A0A669PV29_PHACC6.380e-2336.36PDZ domain-containing protein n=9 Tax=Phasianidae ... [more]
F1NVH4_CHICK6.380e-2336.36PDZ domain-containing protein n=4 Tax=Galliformes ... [more]
A0A7K9TBB2_9AVES6.690e-2337.3726S proteasome non-ATPase regulatory subunit 9 (Fr... [more]
A0A7L1NPW7_RHICY1.310e-2236.8726S proteasome non-ATPase regulatory subunit 9 (Fr... [more]
A0A803VK46_FICAL3.560e-2235.8626S proteasome non-ATPase regulatory subunit 9 n=1... [more]
A0A851NV18_9GALL6.940e-2235.3526S proteasome non-ATPase regulatory subunit 9 (Fr... [more]
A0A6J0H6F4_9PASS9.690e-2235.8626S proteasome non-ATPase regulatory subunit 9 n=5... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_19contigContig_19:76241..79306 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|34996|CE34995_60
BRITEko00000,ko03051
KEGG koko:K06693
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005838,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0008540,GO:0009056,GO:0009057,GO:0009987,GO:0016043,GO:0019538,GO:0019941,GO:0022607,GO:0022624,GO:0030163,GO:0032991,GO:0034622,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043248,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051603,GO:0065003,GO:0070682,GO:0071704,GO:0071840,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369
Preferred nameNAS2
Description26S proteasome non-ATPase, regulatory subunit
COG categoryO
Max annot lvl4751|Fungi
EggNOG OGsCOG0265@1|root,KOG3129@2759|Eukaryota,38DI5@33154|Opisthokonta,3P5F5@4751|Fungi,1GU71@112252|Fungi incertae sedis
Evalue1.42e-19
Seed ortholog78898.MVEG_05575T0
Hectar predicted targeting categoryother localisation
TranscriptId35318
TrackFilteredModels1
ProteinId34996
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|34996gene_5455Tribonema minus UTEX_B_3156 geneContig_19 76241..79306 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|34996Trimin1|34996|CE34995_60Tribonema minus UTEX_B_3156 polypeptideContig_19 76515..78341 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5455_3exon_5455_3Tribonema minus UTEX_B_3156 exonContig_19 76241..76763 -
exon_5455_2exon_5455_2Tribonema minus UTEX_B_3156 exonContig_19 78060..78390 -
exon_5455_1exon_5455_1Tribonema minus UTEX_B_3156 exonContig_19 79286..79306 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_5455UTR3_5455Tribonema minus UTEX_B_3156 three_prime_UTRContig_19 76241..76514 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5455CDS_5455Tribonema minus UTEX_B_3156 CDSContig_19 78060..78341 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_5455UTR5_5455Tribonema minus UTEX_B_3156 five_prime_UTRContig_19 79286..79306 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5455 ID=mRNA_5455|Name=jgi.p|Trimin1|34996|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=875bp|location=Sequence derived from alignment at Contig_19:76241..79306- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTATGATATATTTACCATCAGGCACCAGCGCCACCGGCTCGCGTGCATAC
AGACTGATCACAAGGCCCTCATGGCTCAGCTGGAGGCTGCGCTGCACTCG
CTGCACGCGATAGAGCTCTCCAAGGCGAGCGTCGCCCCGGAGCCGGGCCC
CGCGCCGGCTGATGCGCGCTCGGTGCTGAGCACTGCAGACCAGCGGAGCG
CTGCTGCCGCTGCTGCTGCTGCTGCTGCTGCACCTGCTGCTGCTGCGGCG
GCGGCGGCGGCAGCGGCGGTGCCGCCTGTGGCAGCGAGCGGCAGGGAGGC
GGATGCTCAGCAGCTGGCGCCGACGACGGCGCCGTTCGCCAGGGTCAATA
CGGTCGCCCCAGAGTCGCCAGCAGCGCTCAGCGGGCTGCTCCCCGGCGAC
CGCCTCGTCGCCTTCGGGCGCGTCACCGCGTCCAACCACAACGGCCTGTC
GGCGCTCGTGAGCGCCGTGCGCGACTCGGTGAACGCGCCGCTGACGCTGT
GGGTGCAGCGCGATGGCAGCGCTCAGCTCCTGGCGCTGCGCCTCACGCCG
CGCGCGTGGGCGGGCCAGGGGCTGCTCGGCTGCCACATCCTGCCCCTGTG
AGCGCTGCTGCCGCGGAGGGCTGCGGCCTTGTTGAGGTTGGAGTTGAAGT
TGGAGCTTTGGAGCAGCAGGGGCCAGGAGCTGCTGGGATGCCGCTTCCTG
CCCCCGCGAGCGCTGCCGCGGAGGCTATGCCCTAGTTCAGGTTGGAGTTG
AGAATGGGCCTTCAGAGCAGCGGGGGGGTCGATGTCGTGGGGGGCATCCT
GCCCCTGTGAGCGCTGCCGCGGAGGAGACGACAGAGAGTTCAGGTCAGAG
TTGAAGTTGCAGGCTGGAGCAGCGG
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protein sequence of jgi.p|Trimin1|34996

>Trimin1|34996|CE34995_60 ID=Trimin1|34996|CE34995_60|Name=jgi.p|Trimin1|34996|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=177bp
MAQLEAALHSLHAIELSKASVAPEPGPAPADARSVLSTADQRSAAAAAAA
AAAAPAAAAAAAAAAAVPPVAASGREADAQQLAPTTAPFARVNTVAPESP
AALSGLLPGDRLVAFGRVTASNHNGLSALVSAVRDSVNAPLTLWVQRDGS
AQLLALRLTPRAWAGQGLLGCHILPL*
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mRNA from alignment at Contig_19:76241..79306-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5455 ID=mRNA_5455|Name=jgi.p|Trimin1|34996|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3066bp|location=Sequence derived from alignment at Contig_19:76241..79306- (Tribonema minus UTEX_B_3156 )
CTATGATATATTTACCATCAGGCAAGCCTTGAAGCTGGTACCTTGTTTTG TCCAGTTTTGCAAAATGTGGATCTGATCTTCTGTGGATTTCGAAATCATG TTGCCGTACCGACCGTGGTCGGCTTCCCTTCCCACTTCTAGCAGGTACTT CTATGCTAGCCGCACTATCATTGATGGCCTTGAGAGGACAGCACATGTTT TGACTTGACACCGCAGCTGTCAGACGCAAGCAGAGACTTCTTGAGTTCAA CCAGATGTTGATGGGAGCCCCAAGGGAAGGCTGGTTCACTACCATGCCGT TTGATGGTCAAAGAATTCTTCTTTCGCGCTTGTGTTTTAATTTTGGATGC CTACGTTCAACTCAACGATCTAAAAGCAGCTTCTCACACCGTGTTAAATC GGTATCAACGTTAGACCTGCTTGTTCGGTCTGGATGGCACTGATGCTTTT GTCTATGTAGGGGAGCAGGCAGAAGAGCCTTCTCCGCTGGAGCAACACAT GAGGGCGTACTGATTGTCAAGCCTCCATGGTTGACATTGGAGATACTGGG TGGTGGTGGCTGATGCTTGTTCCCATGTCGGCAGTCTGTGACTGCCATGG TTCAAACCCAACTGTTTTTACTGCGCATGGTGAGCCTTGCTCTAATGCTG AAGTTCCCATCACTGACCCATAGAGATGCATGAATGACGTGTAACAATGT GGTTTGGAAGACTTTCGTCAAAGAGGTCGACGACAGTATGTATCGCTTTG CCACGGTTCCAACATTACCGTGCCAACGCGCGTTCACCCCGTTCGACTCG CCCGACCAATGCCGCAGGCTCGCGTGCACACAGATCGATCACAAGGCCAT CATGGCTCAGCTGGAGTCACCCTTCACTCACTCACTCACTCACTCACTCT ACTGACTCGACCGCAGGCACCAGCGCCACCGGCTCGCGTGCATACAGACT GATCACAAGGCCCTCATGGCTCAGCTGGAGGCTGCGCTGCACTCGCTGCA CGCGATAGAGCTCTCCAAGGCGAGCGTCGCCCCGGAGCCGGGCCCCGCGC CGGCTGATGCGCGCTCGGTGCTGAGCACTGCAGACCAGCGGAGCGCTGCT GCCGCTGCTGCTGCTGCTGCTGCTGCACCTGCTGCTGCTGCGGCGGCGGC GGCGGCAGCGGCGGTGCCGCCTGTGGCAGCGAGCGGCAGGGAGGCGGATG CTCAGCAGCTGGCGCCGACGACGGCGCCGTTCGCCAGGGTCAATACGGTG AGCGCTGCCACGTGTTTCAGATGTTGAAGTTGACTCTCCTTTGCGTTACT TGTTTCAGTGTGCACCACAGTCAGCGGGGAAGGTGGTCATTGCGGTGCCG CTCGCTACCGTACGCGCACGTGGACTGCCAGGGAGGTCTTTCTCATATTG TGTACACCATCACGTGGCCCAACCGCTTCTCCATGCGCACAACGGTATCT GCTGCCAGAATACCCCAGAGTCCCCAGCAGCGCGCAGCAGACCGCTCCCC GGGGCAACAATGACGCATATCCTTTTCTTGCAGCACGCTGCCCACAACCT CGAACTCACCCTCTCCAGTACCACTCACGGTTCCACCGACAGGTCGCCCC AGAGTCACCAGCAGCGCTCAGCGGACTGCAGCGGACTGCTCCCCGGTGAA CCCCTTGTCGCCTTCAGCCGCTTTGCGATTGCCAACCCCAAGTTCTTGTC TCTCAACTGCCTGCAGCACGCTGCGTACAATCTCTAGATCACCCGTTGCC AGCAGCACGCTGCGTACAATCTCTAGATCACCCGTTGCCATGCCGACCAC TGACAGGTCGCCTCAGAATCACCAGCAGCGCTCAGCGGACTTCGCCCCGG CGACCGCCTCGTCGCCTTCACTTGCTTCGCGATCGCCAACTCCAACAGTT ACTTCTTGTCTCCTCGCGTACCTGCAGCACGCTGCCCCCAACCCCTAACT CGCCCTATCCGATACCATTCACGGTGCCACTGACAGGTTGCGCCAGAGTC CCCAGCAGCGTTCAGCGGACTGCGCCCCGGCGACCGCCTCGTCGCCTTTG GGCGCGTCACCGCCACCAACCACATCACACCTCATTTCTTTTTGCTCAGT CGTTTGCTTGCATTCATCCACTCAACGTCCCTCCCATGCTACCTACAATC TGCACCTTTACTCAAACCGACAGGAGGTGGCACCAGAGTCTCCAGCAGCG CTCAGCAGACTGCTCCCCGGCGATCGCCTCGTCGCCTCCAGCCGCTTCGC AATGCCAACCCCTGCGTTTTGTACTTGCCTCAGACACCTGCAGCACGCTG CCCACAGTCCCTAGCTCACCCCTTGCCATGTTCACACCAATCTCAACTGC CAGGTAGCGCCAGAGTCGCCAGCAGCGCTCAGCGGACTGCTCCCTGGCGA CCGCCTCGTCGCCTTCGGCCGCGTCACCTCTACTCGCTGCACACACCCTA TGCATCTCTCAGTTACTTGCTCTCGGTTACTTGCAGCGTGCCATCCACAG CAAGTGACCTAACCCATGTCCACAATGGTCTGTTAATCACCAGGTCGCCC CAGAGTCGCCAGCAGCGCTCAGCGGGCTGCTCCCCGGCGACCGCCTCGTC GCCTTCGGGCGCGTCACCGCGTCCAACCACAACGGCCTGTCGGCGCTCGT GAGCGCCGTGCGCGACTCGGTGAACGCGCCGCTGACGCTGTGGGTGCAGC GCGATGGCAGCGCTCAGCTCCTGGCGCTGCGCCTCACGCCGCGCGCGTGG GCGGGCCAGGGGCTGCTCGGCTGCCACATCCTGCCCCTGTGAGCGCTGCT GCCGCGGAGGGCTGCGGCCTTGTTGAGGTTGGAGTTGAAGTTGGAGCTTT GGAGCAGCAGGGGCCAGGAGCTGCTGGGATGCCGCTTCCTGCCCCCGCGA GCGCTGCCGCGGAGGCTATGCCCTAGTTCAGGTTGGAGTTGAGAATGGGC CTTCAGAGCAGCGGGGGGGTCGATGTCGTGGGGGGCATCCTGCCCCTGTG AGCGCTGCCGCGGAGGAGACGACAGAGAGTTCAGGTCAGAGTTGAAGTTG CAGGCTGGAGCAGCGG
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Coding sequence (CDS) from alignment at Contig_19:76241..79306-

>mRNA_5455 ID=mRNA_5455|Name=jgi.p|Trimin1|34996|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=531bp|location=Sequence derived from alignment at Contig_19:76241..79306- (Tribonema minus UTEX_B_3156 )
ATGGCTCAGCTGGAGGCTGCGCTGCACTCGCTGCACGCGATAGAGCTCTC
CAAGGCGAGCGTCGCCCCGGAGCCGGGCCCCGCGCCGGCTGATGCGCGCT
CGGTGCTGAGCACTGCAGACCAGCGGAGCGCTGCTGCCGCTGCTGCTGCT
GCTGCTGCTGCACCTGCTGCTGCTGCGGCGGCGGCGGCGGCAGCGGCGGT
GCCGCCTGTGGCAGCGAGCGGCAGGGAGGCGGATGCTCAGCAGCTGGCGC
CGACGACGGCGCCGTTCGCCAGGGTCAATACGGTCGCCCCAGAGTCGCCA
GCAGCGCTCAGCGGGCTGCTCCCCGGCGACCGCCTCGTCGCCTTCGGGCG
CGTCACCGCGTCCAACCACAACGGCCTGTCGGCGCTCGTGAGCGCCGTGC
GCGACTCGGTGAACGCGCCGCTGACGCTGTGGGTGCAGCGCGATGGCAGC
GCTCAGCTCCTGGCGCTGCGCCTCACGCCGCGCGCGTGGGCGGGCCAGGG
GCTGCTCGGCTGCCACATCCTGCCCCTGTGA
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