mRNA_17341 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353855
Unique NamemRNA_17341
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A835Z6I5_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I5_9STRA)

HSP 1 Score: 1916 bits (4963), Expect = 0.000e+0
Identity = 1115/1115 (100.00%), Postives = 1115/1115 (100.00%), Query Frame = 1
Query:    1 MPYQQLLLQQSMPYQQLHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHLXQQVLXXEAAAQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 3345
            MPYQQLLLQQSMPYQQLHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHLXQQVLXXEAAAQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK
Sbjct:    1 MPYQQLLLQQSMPYQQLHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHLXQQVLXXEAAAQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 1115          
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A836CHP0_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHP0_9STRA)

HSP 1 Score: 1302 bits (3369), Expect = 0.000e+0
Identity = 704/798 (88.22%), Postives = 715/798 (89.60%), Query Frame = 1
Query: 1063 AQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIE--RPLES--GVIVLYYKSVRGGRWQLIITTEEAL--DKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWL--------------NIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQ-----------------CYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 3345
            A+IAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSC VIRELYNSDRSGQASRSRMLAQ+         L  R  P  R+  + L +   RPL +          + R      +  T+      KCAFTVIGAMVPEGMQ LALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRA WL              NIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQ                  YIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFP+FKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLV+AREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK
Sbjct:   45 AEIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCLVIRELYNSDRSGQASRSRMLAQLG--------LQYRAPPRERRDCALLQVRARRPLAAHXXXXXXXXXAARPQNQFFVSDTKWTTCPQKCAFTVIGAMVPEGMQPLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRARWLVSCCFFHNIRATMKNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQWWKNGWLGKTTPLADWISYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPMFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVRAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 834          
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A835YUM4_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM4_9STRA)

HSP 1 Score: 517 bits (1331), Expect = 1.660e-158
Identity = 355/983 (36.11%), Postives = 480/983 (48.83%), Query Frame = 1
Query:  649 THLITAGTTLAAFVDFYGPE--SQYNFSAGDASVMKFSDDDPRPLAIVH---NSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGST---RDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIER---------------------------PLESGVIVLYYKSVRGGRWQLIITTEEALD---------------------KCAFTVIGAMVPEG-MQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWL-------NIE--KKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQC-------------------YIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEF-VKRPEHPLDPAGPEGPSEWYLVK--------AREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVAD--GFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAET-TVHISCDDTAREAEQMLRDATVERVVSTQPYVACG-DSNEPHLEKRAK 3303
            T LI  G  +  F + YGP   S YN       +   S+ D RPL   H      G DN+ TLTAAG EL   G+G+R A+   LHC G T   + +GANC RNP    KWC    G C  GCTWK     P H CRV  +++A+V Q+    +Q++  G+HTT G  P  V+P     S H  R + + D +GQ +  +  AQ+AA+ P G+  +G       Q+++AL   R                           PL SGVIVLY++S  GG W L++TT  ALD                       AFT+IG ++P G ++ L + ISN EN  TT  +A+ L  AAPCG DC+H W      D   Y+R R C    P   F  MV IDK++ S KAF  AGW        N+   ++L  KKRKA E GD        Y+K    P++ A D  +R+++ S SA++Y  +L + LD +E                     Y++QY GG WG+ MGD+IGH VPGY AT N+ E  F +VD CL +GK C  F YL+ELVLG+TADG  T G +YF +F++L  +++  GR++  R VE QR CN RW+ L++  VKRP  P    G  G +EWY V+        +R GAI+     P PAA                          G FDPT A +  +   E  D P      +Y VGMR  PGGA I+ C C DY+ RGN+HD CKHA+AA+ YKE E+A+   +++ ++                         H+ H+M Y+  VE +KPDK+  LY AC+ L+W R   + LR  K     A           DV IA G  C +    + + +C EL L+    +I +G   D K   R GDIV SV+  VG AE  T+ +     A +A+  L     ER +S   Y   G D   PH+ KRAK
Sbjct:  365 TFLIHQGADVPDFKERYGPYAFSAYNHLTDKTRLCTVSEQDARPLVQEHLHLGKRGIDNVRTLTAAGEELRAGGRGSRQAFRTTLHCAGGTSAGKPNGANCQRNP-CGGKWCDGV-GACAPGCTWKRG---PNHNCRVSYEITASVDQVHLGIVQLRIVGQHTT-GYAPKGVDPSCRAKSVHAKRVIRDVDSAGQQTLFQFRAQLAALAPEGSARSGLFHQRPAQLSNALAYVRRKRGNRGVGVFTGINAMIRGKCLSIAVPLSSGVIVLYFRSKPGGLWHLVVTTPAALDILRDPNIRFFVSDTKWDTNPQHFAFTIIGCVMPGGGLRPLVIGISNIENAKTTLAMAEALTIAAPCGPDCQHPWKHGRKKD-GTYHRWRACPNPPP---FSPMVAIDKAAGSLKAFKAAGWRVSTCFFHNVRSLRELHFKKRKAVEDGD------TPYEKPRKEPVIEALDKLIRLVIRSHSAEQYEERLALLLDTVEDWGSDKKRWLGTATPTADFVNYLRQYMGGAWGETMGDYIGHDVPGYEATTNSGERSFGVVDMCLFYGKRCHSFRYLLELVLGITADGKRTRGTAYFDLFQQLWEDKEEGGRRL--RTVELQRQCNGRWIYLQKHGVKRPA-PHQRTGANG-TEWYFVRNGVCPIAVSRTGAIS-----PQPAA----------------------EVEDGAFDPTDAIEAFYALIEEQDPPPPRQWSYYPVGMRTTPGGAPIIWCSCEDYFRRGNTHDPCKHAVAALAYKEEEEASGAEQKQAVVE-----------------------THQHHVMSYIKHVEHKKPDKNMELYLACRELNWVRAR-KALRSAKRTAAAAP-----AAAPHDVVIAPGTVCTVGLDEVSEDVCDELKLQGDAYLISHGEVCDPKYRERIGDIVVSVSRRVGDAEVETLRLDSAAAATQAQIWLAATETERGMSLMTYNHNGRDIELPHMPKRAK 1271          
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A835YS27_9STRA (SWIM-type domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS27_9STRA)

HSP 1 Score: 436 bits (1120), Expect = 1.230e-128
Identity = 343/1005 (34.13%), Postives = 472/1005 (46.97%), Query Frame = 1
Query:  553 TTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPE-SQYNFSAGDASVMKFSDDDPRPLAIVHNSAGS---------DNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGE--CELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGR------------------------NTPTARQVT---SALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALD---------------------KCAFTVIGAMVP---EGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRM--VTPPLAFPVMVGIDKSSMSRKAFLRAGWL--------------NIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGR------------------WGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDK--DQVLYDACKALDWARVHARLL-----RRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKIT--------LRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVE 3231
            T    P+ L+TE  L   +CLASV    +  RT+ +   T+  AF++FY PE S YNF AG+  +   S +D R L + H +AG+         DN  TL+ AGREL+  GK  R  + + LHC G +  SGANC +NPG   +WC++  G+  C  GCTW+       H C V ++V+AT+AQ+    +Q+Q  G HT DGVVPVPV+  KLDLS      + N+ ++G   RS+ +    A+VP+GA LTGR                         T TA        AL +  PL +GVI LYY++  G + QL++++E+ALD                     K AF+VIG  VP    G + L  SISN E+ D+TF +A+ L+ A PC   C HEW E W D    Y R R C    VTP   F   VGIDKSS ++  F RAGW               N+++KL SKK                      H ++  FD  +R+++ +Q+A+ Y R L+  L  +E    + Y G                    W    GD     V G   T N VES FL V K + +  +   +  L  L LGV ADG      SYF  F+R ++ R + G+  V+  VE QR  N RWL     V+R  H     G    + WYLV      +A   K P PAA           XXXXXXXX         F+  T  +++    E A I   DG Y VG+   PG + ++TCIC D++ RG +H  CKHA+AA+ Y+E   A   A + R++  Q++                       HIM Y    E+ KP    D  LYDAC+A +WARV A L      RR  G    A      +     +T+AAGV C++ F  + D +  EL L   T ++RNG A   + T        L  GDIV+SV+     A   V I  D +AR+A+ ++ DA+ E
Sbjct:  458 TPRQPPQSLVTENELRRAECLASVEERGD--RTYTMHV-TSALAFMEFYCPELSTYNFLAGNHRMFPVSQEDSRELGVEHTAAGNKTGVGKHRIDNRYTLSPAGRELVALGKLNRQVFRLLLHCAGGSGGSGANCRKNPGAKGQWCAAAAGDGSCAPGCTWRRGAN---HHCAVEVRVTATIAQVLKHTVQLQITGRHTADGVVPVPVDLQKLDLSLIFDDYIRNTCQAGAVCRSKAIRDALALVPQGARLTGRCHLGRIHYSNVVSYAARLTCSAVPGTFTAFDAVVRQHALSMATPLPNGVIALYYRAESGEKMQLVLSSEKALDALRDKSVQFVLSDTNWKAAPQKPAFSVIGCPVPLPVGGFRPLVASISNTEDGDSTFFMAEALQLAVPCCATCDHEWKEGWTD--GTYRRWRSCAKDSVTP---FRPTVGIDKSSTAQAGFRRAGWSISVCFFHSIKAMLKNLKEKLGSKK----------------------HWLIPFFDDAIRMVMRAQTAEVYKRALDALLATVESWGTRGYLGADPADFISYLKTAMGFEGTLWEGTQGDFRARDVEGLENTTNNVESHFLSVQKTIFYCNLNGTYARLAPLFLGVRADGEGRP-VSYFDTFERAMAARAKEGKGRVK-SVELQRLVNGRWLHATGKVQRRRHTGGHVG----TRWYLVNKEVPNVA---KSPLPAA--------VASXXXXXXXXGTAETLPDSFNVDTELNDILYEVEAAGIKAEDGHYVVGIVSEPGRSDVITCICPDFWRRGGTHSLCKHAVAAVAYEEEHAATGAAAKRRVVELQRK-----------------------HIMDYFMITERNKPRAATDHELYDACRAGEWARVRAILEEGPRPRRSLGDRDDA----TTIATRYTLTLAAGVWCNVGFERVCDKVRAELDLPAATYVVRNGYAAQYEWTPKIRPKRDLCAGDIVFSVST----AADEVLIVDDASARDAQLLVADASAE 1381          
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A835YU83_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU83_9STRA)

HSP 1 Score: 306 bits (783), Expect = 1.780e-88
Identity = 220/658 (33.43%), Postives = 301/658 (45.74%), Query Frame = 1
Query: 1084 MQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALC------------------------IERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQC-----------------YIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAI----AEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKG 2922
            M+VQ  GEHT  GVVP  V+P  L  S   +  +YN+D  GQA+R R+  Q  A VP GA LTGRNT T +Q+++AL                         + R L SGVI+LYYKS  GG WQ+++TTE+ALD    T I + V           S+ +++     LA T+  A   G                        R    PL     V  D    +R+                                   K    HPML  FD+ +R L+ +QS  +Y   L+  L  +E+                  Y+K+ FG RW  + G++IG    GY A NN+VES F  +D CL FGK C+ F YL+E+VLGVTA+   T+GPSYF  F  +L+++   G                RW+ L++ V+ PE   +   PEG SEWYLV      I    ++P++P APAA                         +  FD    F+++FR     D PV  GFY VGMR   GG+RIVTC+C DYY+RGN+H  C+HA+AA+ +KE +D   +AK+E ++ QQ                       +M +M YL  VEQ + DKD  LYDAC A +W  V   LL++  G
Sbjct:   19 MKVQIRGEHTPGGVVPRAVDPASLTPSVLEVDHVYNADCDGQATRCRLRRQALARVPAGAALTGRNTMTKKQISAALYRSRKKRRSEGLGTFTGVHAAISKNLYRTLPSGVIILYYKSEPGGFWQIVVTTEKALDVLRDTSIRSFV-----------SDTKHDTCPQKLAFTVIGAVLPG------------------------RRGMQPL-----VERDDVPQARR-----------------------------------KPKVKHPMLAEFDMAIRALVTAQSESKYKATLKALLRTVERWGKDGWLVSRSPPEYFVKYLKKSFGKRWFGSTGNYIGQDESGYEANNNSVESSFRTMDACLFFGKRCTSFPYLMEMVLGVTANWKLTIGPSYFEQFAGVLADKHLEG---------------PRWIKLQDGVQLPESLSEHDEPEGRSEWYLVSEMPINICITRSKPERPIAPAA------------------VWRENGCQITFDRENEFNDIFRVLTLRDAPVQHGFYTVGMRISAGGSRIVTCMCGDYYYRGNTHHPCRHAVAALAFKEEQDEPDEAKKEDIVRQQ-----------------------RMQVMSYLKNVEQGRADKDIRLYDACAAANWPLVE-HLLKQQDG 544          
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A835YZ00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ00_9STRA)

HSP 1 Score: 256 bits (653), Expect = 2.040e-67
Identity = 205/626 (32.75%), Postives = 291/626 (46.49%), Query Frame = 1
Query:  568 PEP-LITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPE-SQYNFSAGDASVMKFSDDDPRPLAIVHNSAGS---------DNILTLTAAGRELLEQGKG----------ARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRN--------------TPTARQV-------------TSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALD---------------------KCAFTVIGAMVPE---GMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQC------------------YIKQ---YFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRL 2166
            P+P L TEA L    C++ V+     PRT+ +    TLA F++ Y  E S YN  A   ++ KFS  DPRPL    ++A +         DN  TL  A +EL++  +            R AY M L C G +  +GANC + PG   +WC STTG C   C      K+  H CRV + VSATV Q+A  E+Q++F G HT +G+V VPV P  L +S  VI + ++S  +  +SRSR L    A++P+GA L+GR               T     V             T AL I RPL + VI L+Y +V GGR QL++T+E+ALD                     K   T +G  +P    GMQ +  SISN EN +TT  +A++L+ A PC   C H W ++W D    Y R R C    PPL          +   R++       ++E  +QS+ +     G   A             ML  F+  +R+L+ +Q+A+ Y   L   L+++                     Y+K    + G  W   MGD   H +     TNN  ES F++++KCLL+ K    F+ L  L LG+ A G PT   SYF + K+L
Sbjct:  333 PQPQLPTEAELQRAACVSHVK--EVAPRTYTMRVSDTLA-FIELYCNELSGYNTFADRTTIEKFSVADPRPLVREMHAATNLALIGKHRPDNRFTLEPARQELMDLAESDHSEDKCETSGRRAYRMILFCAGGSNGNGANCSKFPGRKSQWCDSTTGTCAPDCP---GIKKNNHHCRVTLYVSATVTQVARQEVQLEFRGSHTQNGIVAVPVAPANLKVS-QVITDHHHSSLA--SSRSRALQDAFALIPQGAELSGRYRISRVGHSNAKAYVTKLTSSVVPGTFSAFDNLVRTHALRIYRPLPNRVIPLHYTAVEGGRMQLVLTSEDALDVLRDKSLQFLVSDSNWDLAKEKTVLTTVGCPLPGPAGGMQPIIASISNTENTETTMQVARSLQGAVPCCATCDHPWLDKWRD--GVYNRWRSCSRDNPPLP---------NCWDRQS------RHVEGGVQSRGKLKKLLGPTAA------------GMLPQFETAIRLLMRAQTAEVYQLVLLEVLELVTAWGSKRPSWLGRTPTAKFIKYLKTALGFEGTGWEGTMGDFSAHLLSLLHDTNNVTESHFMVIEKCLLYNKRNMAFSNLGPLFLGINAQGKPTRRLSYFQMVKQL 920          
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A835YYN2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYN2_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.140e-29
Identity = 112/423 (26.48%), Postives = 170/423 (40.19%), Query Frame = 1
Query:  643 PRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSD---DDPRPLAIVHNSAGS---------------------DNILTLTA----AGRELLEQGKGARSAYHMFLHCQGSTR---DSGANCHRNPGPNDKWCSSTTGECELGCTWKH-----NKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVI--------------------------------VLYYKSVRGGRWQLIITTEEALDKC-------AFT---------------VIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGE-DCRHEWHEEWVDDKAAYYRKRRCRMVTP 1638
            P T+ +  G  +A F++ YGP+     +     V  + +     P P       +G                      D +  L A    A R +       R A+  +LHC G+      SG+NC R+P    KWC+S TG C+  C W         + P H CR+H++++ATV+Q+A   + VQ  G HT +GV   PV  D+L  S      +  + R+G   RS ++A  +  +  GAP T R +P   Q ++ +  ++ +  G +                                V+YY S   G  QL++ TEE+L          AFT               V+ A    G   LA+S+S  ENE TT    + + +A PC +  C H W E   +D   Y R R C +  P
Sbjct:   62 PMTYEVPQGAAVAEFLELYGPDCVVMTNLLWGKVKHYRELARTQPHPSNCTSGRSGGGGRRASATSKNRYDDIRFLHGDGLARLAALEAHAARPVDPIPPVDRQAFSAYLHCAGADHRSGPSGSNCFRDP-CRGKWCASETGVCDPSCVWAQMPDFKRSRHPQHRCRMHVRLTATVSQVARGVVTVQVVGAHTAEGVEWRPVASDRLTPSVFAKDAVIRAARAGPVQRSSVVAIESKRLGEGAPHTTRVSPKRTQASALMAYDQRVSRGPVCGAHNSVDAAVRLYHLSMDDPLPPDRNPDGAQVIYYTSQHDGVLQLVVATEESLANARAHGCDQAFTDSKHDLASSKPATTPVLCAAPGGGTLPLAISVSTVENEVTTECALRAVRDAVPCSDPSCSHPWEEHTSEDCTVYRRYRPCALPCP 483          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A835Z6I5_9STRA0.000e+0100.00SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CHP0_9STRA0.000e+088.22SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YUM4_9STRA1.660e-15836.11SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YS27_9STRA1.230e-12834.13SWIM-type domain-containing protein n=2 Tax=Tribon... [more]
A0A835YU83_9STRA1.780e-8833.43SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YZ00_9STRA2.040e-6732.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYN2_9STRA2.140e-2926.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_189contigContig_189:52629..56815 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353855|estExt_Genemark1.C_Ctg_1890009
Hectar predicted targeting categoryother localisation
TranscriptId354177
TrackFilteredModels1
ProteinId353855
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353855gene_17341Tribonema minus UTEX_B_3156 geneContig_189 52629..56815 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353855Trimin1|353855|estExt_Genemark1.C_Ctg_1890009Tribonema minus UTEX_B_3156 polypeptideContig_189 52637..56815 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17341_7exon_17341_7Tribonema minus UTEX_B_3156 exonContig_189 52629..53744 -
exon_17341_6exon_17341_6Tribonema minus UTEX_B_3156 exonContig_189 54006..54323 -
exon_17341_5exon_17341_5Tribonema minus UTEX_B_3156 exonContig_189 54374..54579 -
exon_17341_4exon_17341_4Tribonema minus UTEX_B_3156 exonContig_189 54806..55105 -
exon_17341_3exon_17341_3Tribonema minus UTEX_B_3156 exonContig_189 55168..55267 -
exon_17341_2exon_17341_2Tribonema minus UTEX_B_3156 exonContig_189 55367..55882 -
exon_17341_1exon_17341_1Tribonema minus UTEX_B_3156 exonContig_189 56016..56815 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_17341UTR3_17341Tribonema minus UTEX_B_3156 three_prime_UTRContig_189 52629..52636 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17341CDS_17341Tribonema minus UTEX_B_3156 CDSContig_189 56016..56815 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17341 ID=mRNA_17341|Name=jgi.p|Trimin1|353855|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3356bp|location=Sequence derived from alignment at Contig_189:52629..56815- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCTACCAGCAGCTGCTGCTGCAGCAATCCATGCCCTATCAGCAGCT
GCATCCGCAGATGTACCAGCAGCAGATGTGCCAGCAGCAGCAGATGTTCC
AGCAGCAGCAGATGTACCAGCAGCAGATGTACCAGCAGCAGATGTACCAG
CAGTACATTCATCTTCAGCAACAGGTTTTGCAGCAGGAAGCCGCGGCTCA
GCACGCAGCCGCGGCTCAGCAGGCAGCCGCGGCTCAGCAGGCAGCCGCGG
CTCAGCAGGCAGCTGCGGCTCAGCAGGCAACCACGGCTCAGCAGGCAACC
ACGGCTCAACAGTCAACCGCGGCTCAACAGGCCGCTCATGACGTGTTGAT
TGCTCGCGCCGTACTGGCGGAGATGCAAGCACTGCCGACTCGTGTGACGC
CGTCTGCTGTTCTCTTCGAGCATATACCGCAGCTCGAAAGTGACAGCGAC
AGCGATTACGACAGCGATTACGACAGCAATTACGACAGCGACAGCGATTA
CGACAGCGACAGCGACAGCGGCAGCGACGGTGACGGTGACGGCAACGGCA
ACACCACTACATCATCGCCCGAGCCCCTCATCACCGAGGCGTACCTCATG
AGCCGCCAGTGCTTGGCAAGCGTCAGGCCACACCCCAATCTGCCTCGCAC
GCACCTCATCACGGCTGGCACCACTTTGGCAGCATTCGTCGATTTCTACG
GACCGGAGTCGCAGTACAACTTCTCTGCCGGCGACGCGAGCGTGATGAAA
TTCAGCGATGACGACCCGAGACCCCTCGCCATAGTGCACAACAGCGCTGG
GTCCGACAACATATTGACGCTGACCGCTGCGGGGCGAGAGCTGCTGGAGC
AGGGGAAGGGTGCCCGATCCGCGTACCACATGTTCCTTCATTGCCAGGGC
AGCACGCGCGACAGCGGCGCCAACTGTCATCGCAACCCCGGCCCCAACGA
TAAGTGGTGCAGCTCCACGACGGGAGAGTGCGAGCTGGGCTGCACGTGGA
AGCACAACAAGAAGCAGCCCGCACACGCGTGCCGCGTCCACATCAAGGTA
TCCGCCACGGTGGCACAGATCGCTGCCGCGGAGATGCAGGTACAGTTTGA
GGGCGAGCACACAACGGACGGCGTCGTACCAGTTCCCGTCAACCCCGACA
AGCTCGACCTCAGCTGCCACGTCATCCGCGAGTTGTACAACTCCGACCGC
TCCGGGCAAGCGTCTCGCAGCCGGATGCTAGCGCAGATCGCGGCGATGGT
TCCACGAGGCGCGCCCTTAACGGGCCGCAACACCCCGACGGCGAGGCAGG
TCACCTCAGCTCTGTGTATCGAGCGCCCCCTCGAGAGCGGCGTGATCGTG
CTCTACTACAAGTCCGTGCGCGGCGGCCGCTGGCAGCTCATCATCACCAC
CGAGGAGGCGCTCGACAAGTGCGCCTTCACCGTCATCGGCGCCATGGTCC
CCGAAGGCATGCAGTCGCTCGCTCTCAGCATCTCGAACGAGGAGAACGAG
GACACGACCTTCATCCTCGCCAAGACGCTCGAGAACGCCGCCCCCTGCGG
TGAGGACTGCCGGCACGAGTGGCACGAGGAGTGGGTCGACGACAAGGCGG
CGTACTACCGCAAGCGCAGGTGTCGCATGGTGACGCCTCCGCTGGCTTTC
CCCGTTATGGTGGGCATAGACAAATCGTCGATGTCGAGAAAGGCATTCCT
GCGCGCGGGATGGCTCAACATCGAGAAGAAGCTGCAGAGCAAGAAGCGCA
AGGCAGATGAGGGAGGGGATCCCGGCGCCGAGGAGCACGTGGCGTACAAG
AAAGCGGAACCCCACCCCATGCTCCGGGCGTTCGACTTGTGTCTACGTAT
ACTGCTGCACTCGCAGAGCGCGGACGAGTACAACCGCAAGCTGGAGATAT
TCCTCGACATGATTGAGCAATGCTACATCAAGCAGTACTTCGGAGGGCGC
TGGGGGGATGCGATGGGGGATCACATCGGACACGGCGTACCGGGTTACGC
AGCGACTAACAACGCTGTGGAGAGCGGGTTTCTCATCGTCGACAAGTGCC
TCCTCTTCGGCAAGATGTGCAGCAGATTCACATATCTTATCGAGCTCGTA
CTCGGCGTGACGGCGGATGGCACGCCGACGATGGGGCCCAGCTACTTCCC
GATATTCAAGCGGCTGCTTTCGGAGAGGAAGCGTCACGGCCGCAAGGTGG
TGCGGCGGCCGGTGGAGAAGCAGCGGGACTGCAACGCGCGGTGGCTGCTC
CTGGAGGAATTCGTGAAGCGCCCTGAGCATCCCCTCGATCCTGCTGGCCC
CGAAGGGCCCAGCGAGTGGTACCTCGTCAAAGCACGAGAAGGGGCCATCG
CGGAGCCCAAGAAGCCACCTGCGCCCGCAGCACCGAAGGGGAAGGCACCC
AAGGCGAAGGCGTCAAAGGCGAAGGCGAAGGCGAAGGCGCCCGCGGCGAA
GGCACCCAAGGGCCAGTTCGACCCCACGACCGCATTCGACGAGCTCTTTC
GCGCGTCGGAGCCCGCGGACATCCCAGTGGCCGACGGCTTCTACGCCGTC
GGCATGCGCGACGGCCCTGGCGGCGCGCGGATCGTCACGTGCATCTGCCG
GGACTACTACCACAGGGGAAATTCGCATGACAATTGTAAGCACGCCATCG
CCGCAATCTTGTACAAGGAGGTGGAGGACGCAGCAGCTCAGGCGAAGCGG
GAGCGCCTACTTCTGCAGCAGCAGGAGTCGGACGACGAGTCGGACGACGC
GGCTGATCAGGCGGAGCGGGACCGCCTGCTTCTGCCGCACAAGATGCACA
TCATGAAATACCTCGGCAAGGTGGAGCAGAGGAAGCCCGACAAGGACCAA
GTGCTCTACGACGCCTGCAAGGCGCTCGACTGGGCGCGCGTGCACGCCAG
ACTGCTCCGGCGTCTCAAGGGCGGATGCAAAGGCGCGCAGGGCGGCGGAG
TCGTGGTGCATCCTGTGCGCGACGTCACCATCGCCGCCGGCGTAGAGTGC
GACATCGAATTCCGCCCGATTCTCGACTACATGTGCACCGAACTGACTCT
GCGCCCGATCACCCGGATCATCCGCAACGGCATGGCCCGTGACGGCAAAA
TCACATTGCGCACAGGCGACATCGTCTACTCCGTCACCGCCGTCGTCGGC
GGCGCGGAGACGACGGTGCACATAAGCTGCGACGACACGGCACGGGAGGC
GGAGCAAATGCTGAGAGACGCTACAGTCGAGCGAGTCGTGTCCACCCAGC
CATACGTGGCATGTGGTGACAGCAATGAACCGCACCTAGAAAAGCGCGCT
AAGGACTACTGTGGCCAACAGAACAAGCGCAAGAGTGCAAGGAAATGAGA
ATGCAC
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protein sequence of jgi.p|Trimin1|353855

>Trimin1|353855|estExt_Genemark1.C_Ctg_1890009 ID=Trimin1|353855|estExt_Genemark1.C_Ctg_1890009|Name=jgi.p|Trimin1|353855|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1116bp
MPYQQLLLQQSMPYQQLHPQMYQQQMCQQQQMFQQQQMYQQQMYQQQMYQ
QYIHLQQQVLQQEAAAQHAAAAQQAAAAQQAAAAQQAAAAQQATTAQQAT
TAQQSTAAQQAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSD
SDYDSDYDSNYDSDSDYDSDSDSGSDGDGDGNGNTTTSSPEPLITEAYLM
SRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMK
FSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQG
STRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKV
SATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDR
SGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIV
LYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENE
DTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAF
PVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYK
KAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGR
WGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELV
LGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLL
LEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKAP
KAKASKAKAKAKAPAAKAPKGQFDPTTAFDELFRASEPADIPVADGFYAV
GMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKR
ERLLLQQQESDDESDDAADQAERDRLLLPHKMHIMKYLGKVEQRKPDKDQ
VLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVEC
DIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVG
GAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRA
KDYCGQQNKRKSARK*
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mRNA from alignment at Contig_189:52629..56815-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17341 ID=mRNA_17341|Name=jgi.p|Trimin1|353855|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4187bp|location=Sequence derived from alignment at Contig_189:52629..56815- (Tribonema minus UTEX_B_3156 )
ATGCCCTACCAGCAGCTGCTGCTGCAGCAATCCATGCCCTATCAGCAGCT GCATCCGCAGATGTACCAGCAGCAGATGTGCCAGCAGCAGCAGATGTTCC AGCAGCAGCAGATGTACCAGCAGCAGATGTACCAGCAGCAGATGTACCAG CAGTACATTCATCTTCAGCAACAGGTTTTGCAGCAGGAAGCCGCGGCTCA GCACGCAGCCGCGGCTCAGCAGGCAGCCGCGGCTCAGCAGGCAGCCGCGG CTCAGCAGGCAGCTGCGGCTCAGCAGGCAACCACGGCTCAGCAGGCAACC ACGGCTCAACAGTCAACCGCGGCTCAACAGGCCGCTCATGACGTGTTGAT TGCTCGCGCCGTACTGGCGGAGATGCAAGCACTGCCGACTCGTGTGACGC CGTCTGCTGTTCTCTTCGAGCATATACCGCAGCTCGAAAGTGACAGCGAC AGCGATTACGACAGCGATTACGACAGCAATTACGACAGCGACAGCGATTA CGACAGCGACAGCGACAGCGGCAGCGACGGTGACGGTGACGGCAACGGCA ACACCACTACATCATCGCCCGAGCCCCTCATCACCGAGGCGTACCTCATG AGCCGCCAGTGCTTGGCAAGCGTCAGGCCACACCCCAATCTGCCTCGCAC GCACCTCATCACGGCTGGCACCACTTTGGCAGCATTCGTCGATTTCTACG GACCGGAGTCGCAGTACAACTTCTCTGCCGGCGACGCGAGCGTGATGAAA TTCAGCGATGACGACCCGAGACCCCTCGCCATAGTGCACAACAGCGCTGG GTGCGGCACACACAGGTGAACACTCTTGCCAGCGAATGAAGTTGTACAGT ACAGTTGTGTCATGCTGCAGCTCACATCACGATACACATCATCGCCATGG TCTAACACCATCGCCTGCCCGCCATGCTCTCAGGTCCGACAACATATTGA CGCTGACCGCTGCGGGGCGAGAGCTGCTGGAGCAGGGGAAGGGTGCCCGA TCCGCGTACCACATGTTCCTTCATTGCCAGGGCAGCACGCGCGACAGCGG CGCCAACTGTCATCGCAACCCCGGCCCCAACGATAAGTGGTGCAGCTCCA CGACGGGAGAGTGCGAGCTGGGCTGCACGTGGAAGCACAACAAGAAGCAG CCCGCACACGCGTGCCGCGTCCACATCAAGGTATCCGCCACGGTGGCACA GATCGCTGCCGCGGAGATGCAGGTACAGTTTGAGGGCGAGCACACAACGG ACGGCGTCGTACCAGTTCCCGTCAACCCCGACAAGCTCGACCTCAGCTGC CACGTCATCCGCGAGTTGTACAACTCCGACCGCTCCGGGCAAGCGTCTCG CAGCCGGATGCTAGCGCAGATCGCGGCGATGGTTCCACGAGGCGCGCCCT TAACGGGCCGCAACACCCCGACGGCGAGGCAGGTCACCTCAGCTCTGTGG TACGCCAGGCGTAAGCGCGGCAGCAGGCGCAGCAACGGCGGCAAGAGAAG CCACACCTTCGAAGGAGTTCACCATACCATTTGCAGCTTGGCCTGCAGTA TCGAGCGCCCCCTCGAGAGCGGCGTGATCGTGCTCTACTACAAGTCCGTG CGCGGCGGCCGCTGGCAGCTCATCATCACCACCGAGGAGGCGCTCGACGT GCTGCGAGACCCCAAAATCAGTTTTTTGTCAGTGACACCAAGTGGACGAC GTGCCCGCAGAAGTGCGCCTTCACCGTCATCGGCGCCATGGTCCCCGAAG GCATGCAGTCGCTCGCTCTCAGCATCTCGAACGAGGAGAACGAGGACACG ACCTTCATCCTCGCCAAGACGCTCGAGAACGCCGCCCCCTGCGGTGAGGA CTGCCGGCACGAGTGGCACGAGGAGTGGGTCGACGACAAGGCGGCGTACT ACCGCAAGCGCAGGTGTCGCATGGTGACGCCTCCGCTGGCTTTCCCCGTT ATGGTGGGCATAGACAAATCGTCGATGTCGAGAAAGGCATTCCTGCGCGC GGGATGGCTCGTCAGCTGCTGCTTCTTCCATTACATCCGTGCCACAATGA AGGTGAACATTTCGACCTGTCGCACAGTATCACAGCGCGTGCGCGATCAT CGCATGTACAGCTCGTGTACACAATGCAATCACTGCACTTCAATCACACG TAGTACCCACACATTCTCACACGTGCACCATGTACTGCCCACACATCACC TTTCTCACACATGCATCACATTTCTCACACGTGCAGAACATCGAGAAGAA GCTGCAGAGCAAGAAGCGCAAGGCAGATGAGGGAGGGGATCCCGGCGCCG AGGAGCACGTGGCGTACAAGAAAGCGGAACCCCACCCCATGCTCCGGGCG TTCGACTTGTGTCTACGTATACTGCTGCACTCGCAGAGCGCGGACGAGTA CAACCGCAAGCTGGAGATATTCCTCGACATGATTGAGCAATGGTGGAAAA CGGCTGGCTCGGCAAAACCACCCCGCTCGCAGACTGGATCAGCTACATCA AGCAGTACTTCGGAGGGCGCTGGGGGGATGCGATGGGGGATCACATCGGA CACGGCGTACCGGGTTACGCAGCGACTAACAACGCTGTGGAGAGCGGGTT TCTCATCGTCGACAAGTGCCTCCTCTTCGGCAAGATGTGCAGCAGATTCA CATATCTTATCGAGCTCGTACTCGGCGTGACGGCGGATGGCACGCCGACG ATGGGGCCCAGCTACTTCCCGATATTCAAGCGGCTGCTTTCGGAGAGGAA GCGTCACGGCCGCAAGGTGGTGCGGCGGCCGGTGGAGAAGCAGCGGGACT GCAACGCGCGGTGAGTTCGTAGTTACAGCCACGTGTATTACATATACTGT TTGTGTCGGTGATCATCTGCCGTGCATGCACGACCGTGTCACGATCGTGT CACGATGAACGCAACTGGCGGTGAGTTCGTAGTTACCGCCGCGTGCATGT ACATATATCGACTGTTCGTGTCGTGCCACGCATGCACGACCGTGCCATGA TGCATGCAACTGAAGCTCGTTCGTGCCCCTAACACTCATCACTCTATCCT TCTTTGATATATCTCCTTCAGGTGGCTGCTCCTGGAGGAATTCGTGAAGC GCCCTGAGCATCCCCTCGATCCTGCTGGCCCCGAAGGGCCCAGCGAGTGG TACCTCGTCAAAGCACGAGAAGGGGCCATCGCGGAGCCCAAGAAGCCACC TGCGCCCGCAGCACCGAAGGGGAAGGCACCCAAGGCGAAGGCGTCAAAGG CGAAGGCGAAGGCGAAGGCGCCCGCGGCGAAGGCACCCAAGGGCCAGTTC GACCCCACGACCGCATTCGACGAGCTCTTTCGCGCGTCGGAGCCCGCGGA CATCCCAGTGGCCGACGGCTTCTACGCCGTCGGCATGCGCGACGGCCCTG GCGGCGCGCGGATCGTCACGTGCATCTGCCGGGACTACTACCACAGGGGA AATTCGCATGACAATTGTAAGCACGCCATCGCCGCAATCTTGTACAAGGA GGTGGAGGACGCAGCAGCTCAGGCGAAGCGGGAGCGCCTACTTCTGCAGC AGCAGGAGTCGGACGACGAGTCGGACGACGCGGCTGATCAGGCGGAGCGG GACCGCCTGCTTCTGCCGCACAAGATGCACATCATGAAATACCTCGGCAA GGTGGAGCAGAGGAAGCCCGACAAGGACCAAGTGCTCTACGACGCCTGCA AGGCGCTCGACTGGGCGCGCGTGCACGCCAGACTGCTCCGGCGTCTCAAG GGCGGATGCAAAGGCGCGCAGGGCGGCGGAGTCGTGGTGCATCCTGTGCG CGACGTCACCATCGCCGCCGGCGTAGAGTGCGACATCGAATTCCGCCCGA TTCTCGACTACATGTGCACCGAACTGACTCTGCGCCCGATCACCCGGATC ATCCGCAACGGCATGGCCCGTGACGGCAAAATCACATTGCGCACAGGCGA CATCGTCTACTCCGTCACCGCCGTCGTCGGCGGCGCGGAGACGACGGTGC ACATAAGCTGCGACGACACGGCACGGGAGGCGGAGCAAATGCTGAGAGAC GCTACAGTCGAGCGAGTCGTGTCCACCCAGCCATACGTGGCATGTGGTGA CAGCAATGAACCGCACCTAGAAAAGCGCGCTAAGGACTACTGTGGCCAAC AGAACAAGCGCAAGAGTGCAAGGAAATGAGAATGCAC
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Coding sequence (CDS) from alignment at Contig_189:52629..56815-

>mRNA_17341 ID=mRNA_17341|Name=jgi.p|Trimin1|353855|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3348bp|location=Sequence derived from alignment at Contig_189:52629..56815- (Tribonema minus UTEX_B_3156 )
ATGCCCTACCAGCAGCTGCTGCTGCAGCAATCCATGCCCTATCAGCAGCT
GCATCCGCAGATGTACCAGCAGCAGATGTGCCAGCAGCAGCAGATGTTCC
AGCAGCAGCAGATGTACCAGCAGCAGATGTACCAGCAGCAGATGTACCAG
CAGTACATTCATCTTCAGCAACAGGTTTTGCAGCAGGAAGCCGCGGCTCA
GCACGCAGCCGCGGCTCAGCAGGCAGCCGCGGCTCAGCAGGCAGCCGCGG
CTCAGCAGGCAGCTGCGGCTCAGCAGGCAACCACGGCTCAGCAGGCAACC
ACGGCTCAACAGTCAACCGCGGCTCAACAGGCCGCTCATGACGTGTTGAT
TGCTCGCGCCGTACTGGCGGAGATGCAAGCACTGCCGACTCGTGTGACGC
CGTCTGCTGTTCTCTTCGAGCATATACCGCAGCTCGAAAGTGACAGCGAC
AGCGATTACGACAGCGATTACGACAGCAATTACGACAGCGACAGCGATTA
CGACAGCGACAGCGACAGCGGCAGCGACGGTGACGGTGACGGCAACGGCA
ACACCACTACATCATCGCCCGAGCCCCTCATCACCGAGGCGTACCTCATG
AGCCGCCAGTGCTTGGCAAGCGTCAGGCCACACCCCAATCTGCCTCGCAC
GCACCTCATCACGGCTGGCACCACTTTGGCAGCATTCGTCGATTTCTACG
GACCGGAGTCGCAGTACAACTTCTCTGCCGGCGACGCGAGCGTGATGAAA
TTCAGCGATGACGACCCGAGACCCCTCGCCATAGTGCACAACAGCGCTGG
GTCCGACAACATATTGACGCTGACCGCTGCGGGGCGAGAGCTGCTGGAGC
AGGGGAAGGGTGCCCGATCCGCGTACCACATGTTCCTTCATTGCCAGGGC
AGCACGCGCGACAGCGGCGCCAACTGTCATCGCAACCCCGGCCCCAACGA
TAAGTGGTGCAGCTCCACGACGGGAGAGTGCGAGCTGGGCTGCACGTGGA
AGCACAACAAGAAGCAGCCCGCACACGCGTGCCGCGTCCACATCAAGGTA
TCCGCCACGGTGGCACAGATCGCTGCCGCGGAGATGCAGGTACAGTTTGA
GGGCGAGCACACAACGGACGGCGTCGTACCAGTTCCCGTCAACCCCGACA
AGCTCGACCTCAGCTGCCACGTCATCCGCGAGTTGTACAACTCCGACCGC
TCCGGGCAAGCGTCTCGCAGCCGGATGCTAGCGCAGATCGCGGCGATGGT
TCCACGAGGCGCGCCCTTAACGGGCCGCAACACCCCGACGGCGAGGCAGG
TCACCTCAGCTCTGTGTATCGAGCGCCCCCTCGAGAGCGGCGTGATCGTG
CTCTACTACAAGTCCGTGCGCGGCGGCCGCTGGCAGCTCATCATCACCAC
CGAGGAGGCGCTCGACAAGTGCGCCTTCACCGTCATCGGCGCCATGGTCC
CCGAAGGCATGCAGTCGCTCGCTCTCAGCATCTCGAACGAGGAGAACGAG
GACACGACCTTCATCCTCGCCAAGACGCTCGAGAACGCCGCCCCCTGCGG
TGAGGACTGCCGGCACGAGTGGCACGAGGAGTGGGTCGACGACAAGGCGG
CGTACTACCGCAAGCGCAGGTGTCGCATGGTGACGCCTCCGCTGGCTTTC
CCCGTTATGGTGGGCATAGACAAATCGTCGATGTCGAGAAAGGCATTCCT
GCGCGCGGGATGGCTCAACATCGAGAAGAAGCTGCAGAGCAAGAAGCGCA
AGGCAGATGAGGGAGGGGATCCCGGCGCCGAGGAGCACGTGGCGTACAAG
AAAGCGGAACCCCACCCCATGCTCCGGGCGTTCGACTTGTGTCTACGTAT
ACTGCTGCACTCGCAGAGCGCGGACGAGTACAACCGCAAGCTGGAGATAT
TCCTCGACATGATTGAGCAATGCTACATCAAGCAGTACTTCGGAGGGCGC
TGGGGGGATGCGATGGGGGATCACATCGGACACGGCGTACCGGGTTACGC
AGCGACTAACAACGCTGTGGAGAGCGGGTTTCTCATCGTCGACAAGTGCC
TCCTCTTCGGCAAGATGTGCAGCAGATTCACATATCTTATCGAGCTCGTA
CTCGGCGTGACGGCGGATGGCACGCCGACGATGGGGCCCAGCTACTTCCC
GATATTCAAGCGGCTGCTTTCGGAGAGGAAGCGTCACGGCCGCAAGGTGG
TGCGGCGGCCGGTGGAGAAGCAGCGGGACTGCAACGCGCGGTGGCTGCTC
CTGGAGGAATTCGTGAAGCGCCCTGAGCATCCCCTCGATCCTGCTGGCCC
CGAAGGGCCCAGCGAGTGGTACCTCGTCAAAGCACGAGAAGGGGCCATCG
CGGAGCCCAAGAAGCCACCTGCGCCCGCAGCACCGAAGGGGAAGGCACCC
AAGGCGAAGGCGTCAAAGGCGAAGGCGAAGGCGAAGGCGCCCGCGGCGAA
GGCACCCAAGGGCCAGTTCGACCCCACGACCGCATTCGACGAGCTCTTTC
GCGCGTCGGAGCCCGCGGACATCCCAGTGGCCGACGGCTTCTACGCCGTC
GGCATGCGCGACGGCCCTGGCGGCGCGCGGATCGTCACGTGCATCTGCCG
GGACTACTACCACAGGGGAAATTCGCATGACAATTGTAAGCACGCCATCG
CCGCAATCTTGTACAAGGAGGTGGAGGACGCAGCAGCTCAGGCGAAGCGG
GAGCGCCTACTTCTGCAGCAGCAGGAGTCGGACGACGAGTCGGACGACGC
GGCTGATCAGGCGGAGCGGGACCGCCTGCTTCTGCCGCACAAGATGCACA
TCATGAAATACCTCGGCAAGGTGGAGCAGAGGAAGCCCGACAAGGACCAA
GTGCTCTACGACGCCTGCAAGGCGCTCGACTGGGCGCGCGTGCACGCCAG
ACTGCTCCGGCGTCTCAAGGGCGGATGCAAAGGCGCGCAGGGCGGCGGAG
TCGTGGTGCATCCTGTGCGCGACGTCACCATCGCCGCCGGCGTAGAGTGC
GACATCGAATTCCGCCCGATTCTCGACTACATGTGCACCGAACTGACTCT
GCGCCCGATCACCCGGATCATCCGCAACGGCATGGCCCGTGACGGCAAAA
TCACATTGCGCACAGGCGACATCGTCTACTCCGTCACCGCCGTCGTCGGC
GGCGCGGAGACGACGGTGCACATAAGCTGCGACGACACGGCACGGGAGGC
GGAGCAAATGCTGAGAGACGCTACAGTCGAGCGAGTCGTGTCCACCCAGC
CATACGTGGCATGTGGTGACAGCAATGAACCGCACCTAGAAAAGCGCGCT
AAGGACTACTGTGGCCAACAGAACAAGCGCAAGAGTGCAAGGAAATGA
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