mRNA_17890 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|353851 vs. uniprot
Match: A0A835Z556_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z556_9STRA) HSP 1 Score: 918 bits (2373), Expect = 0.000e+0 Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 1
Query: 1 MNRGRMELLQWARANGCLWKVDESLEFLARIHYIYDARDYISIVSTVEWALANGCPCSDREAPSDAPAGAAAECAAAEPRDKRHKRPKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRELKGHSETVTSVAFSPDGRFLATSSEDGSIRLIQAATLSDPEPKTHRIPLSFDHATALAFNDNTKRLAAVTSDYRKCCLFSIPSEAEASRCAREQCPAWGQGSVRMKKGIKPTLMKEFETGHSNPIMEASGAGSSAQFFSLCLAARPDAALVMLLDVEKWMVVVTCGAGSDTIVNLFSVKGEKLTHADTGHIKNNVACASADNRFIAVGCYLPEVTLLEVCRKKQTGEFDKLARAMTLGGHKGQVVGVAINSTTTRAATVSLDGTWRVWDITVRYNLDEDPRCQGTYPLDATKGVPTGIAFGPGGKVVAISAGKRLLYFSAETGAQVGEVADACGTGSIVGLKSPRDAHCVAVVASGNKHAFLWKFPDV 1467
MNRGRMELLQWARANGCLWKVDESLEFLARIHYIYDARDYISIVSTVEWALANGCPCSDREAPSDAPAGAAAECAAAEPRDKRHKRPKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRELKGHSETVTSVAFSPDGRFLATSSEDGSIRLIQAATLSDPEPKTHRIPLSFDHATALAFNDNTKRLAAVTSDYRKCCLFSIPSEAEASRCAREQCPAWGQGSVRMKKGIKPTLMKEFETGHSNPIMEASGAGSSAQFFSLCLAARPDAALVMLLDVEKWMVVVTCGAGSDTIVNLFSVKGEKLTHADTGHIKNNVACASADNRFIAVGCYLPEVTLLEVCRKKQTGEFDKLARAMTLGGHKGQVVGVAINSTTTRAATVSLDGTWRVWDITVRYNLDEDPRCQGTYPLDATKGVPTGIAFGPGGKVVAISAGKRLLYFSAETGAQVGEVADACGTGSIVGLKSPRDAHCVAVVASGNKHAFLWKFPDV
Sbjct: 1 MNRGRMELLQWARANGCLWKVDESLEFLARIHYIYDARDYISIVSTVEWALANGCPCSDREAPSDAPAGAAAECAAAEPRDKRHKRPKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRELKGHSETVTSVAFSPDGRFLATSSEDGSIRLIQAATLSDPEPKTHRIPLSFDHATALAFNDNTKRLAAVTSDYRKCCLFSIPSEAEASRCAREQCPAWGQGSVRMKKGIKPTLMKEFETGHSNPIMEASGAGSSAQFFSLCLAARPDAALVMLLDVEKWMVVVTCGAGSDTIVNLFSVKGEKLTHADTGHIKNNVACASADNRFIAVGCYLPEVTLLEVCRKKQTGEFDKLARAMTLGGHKGQVVGVAINSTTTRAATVSLDGTWRVWDITVRYNLDEDPRCQGTYPLDATKGVPTGIAFGPGGKVVAISAGKRLLYFSAETGAQVGEVADACGTGSIVGLKSPRDAHCVAVVASGNKHAFLWKFPDV 489
BLAST of jgi.p|Trimin1|353851 vs. uniprot
Match: A0A6H5KJT7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJT7_9PHAE) HSP 1 Score: 249 bits (635), Expect = 1.080e-73 Identity = 152/378 (40.21%), Postives = 213/378 (56.35%), Query Frame = 1
Query: 352 LLRELKGHSETVTSVAFSPDGRFLATSSEDGSIRLIQAATLSDPEPKTHRIPLSFDHATALAFNDNTKRLAAVTSDYRKCCLFSIPSEAEASRCAREQCPAWGQGSVRMKKGIKPTLMKEFETGHSNPIMEASGAGSSAQFFSLCLAARPDAALVMLLDVEKWMVVVTCGAGS-DTIVNLFSVKGEKLTHADTGHIKNNVACASADNRFIAVGCYLPEVTLLEVCRKKQTGEFDKLARAMTLGG-HKGQVVGVAINSTTTRAATVSLDGTWRVWDITVRYNLDEDPR-CQGTYPLDATKGVPTGIAFG-PGGKVVAISAGKRLLYFSAETGA--QVGEVADACGTG--SIVGLKSPRDAHCVAVVASGNKHAFLWKFP 1461
L+RELKGH+ VT VAFS DGRF+AT+SED ++R+ T+ D P+ R+ + DH TALAF+DN+KRL T+ ++ C ++IP+ E+ G + L+K F +GH P+ + ++LLDV+KWMVVVTC GS +T + + +G+ L DT N ASADNRF+AVG +PEV +LEV R K GEF ++ARAMTL G H V GV+ N +T+ T S+DGTW +WD +VRYNLDEDPR + DA + A G KVVA+S+G+ + +FS G+ QV V A G+ SI+ + + +D +A A+G+ A LW+FP
Sbjct: 87 LVRELKGHTAQVTGVAFSNDGRFVATASEDRTVRITYLDTIKDSSPRYIRVGIELDHVTALAFSDNSKRLVCATAKSKEICFYTIPTAKESKA-----------------GGGRAELLKSFPSGHEEPVTK-----------------------ILLLDVDKWMVVVTCACGSTETGIRFLNPRGDCLATLDTNQRINYTMEASADNRFLAVGAGMPEVKVLEVSRNKD-GEFSQVARAMTLSGVHTKGVHGVSFNPESTKVVTASIDGTWALWDTSVRYNLDEDPRKLEQHASKDAMNSKYSAAALGGEDAKVVALSSGRHIFFFSVGEGSGKQVESVGAAHGSSGTSILSMLASKDGKLLATTAAGDSRARLWRFP 423
BLAST of jgi.p|Trimin1|353851 vs. uniprot
Match: H3GMD7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMD7_PHYRM) HSP 1 Score: 182 bits (462), Expect = 1.230e-48 Identity = 117/374 (31.28%), Postives = 176/374 (47.06%), Query Frame = 1
Query: 352 LLRELKGHSETVTSVAFSPDGRFLATSSEDGSIRLIQAATLSDPEPKTHRIPLSFDHATALAFNDNTKRLAAVTSDYRKCCLFSIPSEAEASRCAREQCPAWGQGSVRMKKGIKPTLMKEFETGHSNPIMEASGAGSSAQFFSLCLAARPDAALVMLLDVEKWMVVVTCGAGSDTIVNLFSVKGEKLTHADTGHIKNNVACASADNRFIAVGCYLPEVTLLEVCRKKQTGEFDKLARAMTLGGHKGQVVGVAINST----TTRAATVSLDGTWRVWDITVRYNLDEDPRCQGTYPLDATKGVPTGIAFGPGGKVVAISAGKRLLYFSAETGAQVGEVADACGTGSIVGLKSPRDAHCVAVVASGNKHAFLWKFP 1461
++ LKGH VT+ A+SP+GRFLAT+S D SIRL TL D PK H+I + +DHATA+ F+ + + L T G V K +KP ++ +F H + D V++ D+ W ++TC SDT V +S+ GE L +T + N S DNR+IAV Y PEV + E+ R+K TG F K+ + MTL GH+ V+ +A + + R T+S D + R+WDI VRY + EDP+ ++ + + F P GK++A+ GK LL+ + + +A + SP D V V+ +KH ++K P
Sbjct: 89 IVHVLKGHKYGVTAAAYSPNGRFLATASSDRSIRLYFRDTLKDKNPKMHQINIEYDHATAMCFSSDGRSLVIATES--------------------------GTVKVYQKLRMKPEIVADFPIAH-----------------------KTDVHSVLMNDIGNWATIITCAGDSDTDVKFWSLSGELLQTVNTNQVANYHCVGSKDNRYIAVAAYTPEVKIYEIAREK-TGAFKKVNKIMTLQGHRTGVMDLAFDGSDALPVNRVVTISRDASVRLWDINVRYTVQEDPKVLSSFTASDEEPFQA-VDFAPNGKILAVVRGKDLLFLRTSDNKEFFAIVNAVEDPIKRAVFSP-DGSEVLVLGKSSKHVKIYKTP 410
BLAST of jgi.p|Trimin1|353851 vs. uniprot
Match: A0A225X474_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225X474_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.170e-47 Identity = 119/376 (31.65%), Postives = 174/376 (46.28%), Query Frame = 1
Query: 352 LLRELKGHSETVTSVAFSPDGRFLATSSEDGSIRLIQAATLSDPEPKTHRIPLSFDHATALAFNDNTKRLAAVTSDYRKCCLFSIPSEAEASRCAREQCPAWGQGSVRMKKGIKPTLMKEFETGHSNPIMEASGAGSSAQFFSLCLAARPDAALVMLLDVEKWMVVVTCGAGSDTIVNLFSVKGEKLTHADTGHIKNNVACASADNRFIAVGCYLPEVTLLEVCRKKQTGEFDKLARAMTLGGHKGQVVGVAINST----TTRAATVSLDGTWRVWDITVRYNLDEDPRCQGTYPLDATKGVPTGIAFGPGGKVVAISAGKRLLYFSAETGAQVGEVADACGTGSIVGLKSPRDAHCVAVVASGNKHAFLWKFPDV 1467
LL +KGH VT+ A+SP+GRFLAT+S D SIRL TL D PK H+I + +DH TA+ F+ + + L T + G V K KP ++ +F H + D V++ DV W ++TC SDT V +S+ GE L +T + N S DNR+IAV Y PEV + E+ R+K TG F K+ + MTL GH+ V+ +A + + R T+S D + R+WDI VRY + EDP+ T+ A + + F P GK++A+ GK L + + +A SP D V V+ KH ++K P++
Sbjct: 86 LLHSIKGHKYGVTAAAYSPNGRFLATASSDRSIRLHFRETLKDKNPKVHQINIEYDHVTAMGFSSDGRSLVVATEN--------------------------GTVKVYQKLRAKPEVVADFPISH-----------------------KTDVHSVLMNDVGNWATIITCAGDSDTDVKFWSLSGELLQTVNTNQVANYHCVGSKDNRYIAVAAYTPEVKIYEIAREK-TGAFKKVNKIMTLQGHRTGVMDLAFDGSDALPVNRVVTISKDASVRLWDINVRYTVQEDPKVMSTFTASAEQPFQA-VDFAPNGKILAMVRGKDLEFVRTSDNKVFYRIDNAIEDPIKRAGFSP-DGSEVLVLGKNCKHVKIYKTPEL 409
BLAST of jgi.p|Trimin1|353851 vs. uniprot
Match: M4B3C0_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B3C0_HYAAE) HSP 1 Score: 177 bits (449), Expect = 6.480e-47 Identity = 118/376 (31.38%), Postives = 178/376 (47.34%), Query Frame = 1
Query: 352 LLRELKGHSETVTSVAFSPDGRFLATSSEDGSIRLIQAATLSDPEPKTHRIPLSFDHATALAFNDNTKRLAAVTSDYRKCCLFSIPSEAEASRCAREQCPAWGQGSVRMKKGIKPTLMKEFETGHSNPIMEASGAGSSAQFFSLCLAARPDAALVMLLDVEKWMVVVTCGAGSDTIVNLFSVKGEKLTHADTGHIKNNVACASADNRFIAVGCYLPEVTLLEVCRKKQTGEFDKLARAMTLGGHKGQVVGVAINST----TTRAATVSLDGTWRVWDITVRYNLDEDPRCQGTYPLDATKGVPTGIAFGPGGKVVAISAGKRLLYFSAETGAQVGEVADACGTGSIVGLKSPRDAHCVAVVASGNKHAFLWKFPDV 1467
LL LKGH +T+ A+SP+GRF+AT+S D SIRL TL +PK H+I + +DHATAL+F+ + + L T + G V K KP L+ +F T H + D V++ D+ W ++TC SDT V +++ GE L +T + N +S DNR+IAV Y PEV + E+ R+K +G F K+++ MTL GH+ VV +A + + R T+S D R+WDI VRY L EDP+ + F P GK++ + GK L++ A + + + +A + SP D V V+ KH ++K P++
Sbjct: 88 LLHVLKGHKFGLTAAAYSPNGRFVATASSDRSIRLYFRETLKQKQPKVHQITMEYDHATALSFSTDGRSLVVATEN--------------------------GTVKVYQKLRAKPELVADFPTLH-----------------------KTDVHSVLMNDISSWATIITCAGDSDTDVKFWNLSGELLQTVNTNQVANYHCVSSKDNRYIAVAAYTPEVKIYEIAREK-SGAFRKVSKIMTLQGHRMGVVDIAFDGSDAFPVNRVVTISKDVLVRLWDINVRYTLQEDPKA---------------VDFAPNGKMLVMVRGKDLVFVRAGSSDEFCTIPNAIEDSIKRAVFSP-DGSEVLVLGKNCKHVKVYKTPEL 397
BLAST of jgi.p|Trimin1|353851 vs. uniprot
Match: A0A0P1AEI9_PLAHL (WD40 repeat protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEI9_PLAHL) HSP 1 Score: 176 bits (445), Expect = 3.350e-46 Identity = 120/376 (31.91%), Postives = 177/376 (47.07%), Query Frame = 1
Query: 352 LLRELKGHSETVTSVAFSPDGRFLATSSEDGSIRLIQAATLSDPEPKTHRIPLSFDHATALAFNDNTKRLAAVTSDYRKCCLFSIPSEAEASRCAREQCPAWGQGSVRMKKGIKPTLMKEFETGHSNPIMEASGAGSSAQFFSLCLAARPDAALVMLLDVEKWMVVVTCGAGSDTIVNLFSVKGEKLTHADTGHIKNNVACASADNRFIAVGCYLPEVTLLEVCRKKQTGEFDKLARAMTLGGHKGQVVGVAINSTTT----RAATVSLDGTWRVWDITVRYNLDEDPRCQGTYPLDATKGVPTGIAFGPGGKVVAISAGKRLLYFSAETGAQVGEVADACGTGSIVGLKSPRDAHCVAVVASGNKHAFLWKFPDV 1467
L+ L+GH VT+ A+SP+GRF+AT+S D SIRL TL D PK H I + +DH TA+ F+ SD R F + +E+ G V K +KP ++ EF H + D V++ D+ W V+TC SDT V +++ GE L +T + N S DNR+IAV Y PEV + E+ R++ TG F K+ + MTL GH+ VV +A N + T R T+S D + RVWDI VRY + EDP+ ++ + + F P GK++ + GK L++ + +A SP D V V+ KH ++K P++
Sbjct: 88 LITVLRGHKYGVTAAAYSPNGRFVATASSDRSIRLYFRDTLKDKNPKLHNIKIDYDHVTAMNFS----------SDGRS---FVVATES-------------GNIKVYQKLRVKPQIVTEFPISH-----------------------KADVHSVLMNDIGNWATVITCAGDSDTDVKFWNLNGELLQVVNTNQVTNYHCVGSKDNRYIAVAAYTPEVKIYEIVRER-TGAFKKVQKIMTLHGHRTGVVDLAFNGSDTLPVDRVVTISKDASLRVWDINVRYTVQEDPKVLSSFNVSEGEAFQA-TDFAPNGKMLVMVRGKDLVFIRISDNKVFSTIKNAIEDLIKRATFSP-DGSEVLVLGKNCKHVKIYKTPEL 411
BLAST of jgi.p|Trimin1|353851 vs. uniprot
Match: W2QY19_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2QY19_PHYPN) HSP 1 Score: 175 bits (443), Expect = 6.490e-46 Identity = 116/382 (30.37%), Postives = 175/382 (45.81%), Query Frame = 1
Query: 352 LLRELKGHSETVTSVAFSPDGRFLATSSEDGSIRLIQAATLSDPEPKTHRIPLSFDHATALAFNDNTKRLAAVTSDYRKCCLFSIPSEAEASRCAREQCPAWGQGSVRMKKGIKPTLMKEFETGHSNPIMEASGAGSSAQFFSLCLAARPDAALVMLLDVEKWMVVVTCGAGSDTIVNLFSVKGEKLTHADTGHIKNNVACASADNRFIAVGCYLPEVTLLEVCRKKQTGEFDKLARAMTLGGHKGQVVGVAINST----TTRAATVSLDGTWRVWDITVRYNLDEDPR------CQGTYPLDATKGVPTGIAFGPGGKVVAISAGKRLLYFSAETGAQVGEVADACGTGSIVGLKSPRDAHCVAVVASGNKHAFLWKFPDV 1467
+L LKGH +T+ A+SP+GRFLAT+S D SIRL TL + PK H+I + +DH TA+ F+ + + L T + G + K KP ++ +F H + D V++ D+ W ++TC SDT V +++ GE L +T + N S DNR+IAV Y PEV + E+ R+K TG F K+ + MTL GH+ V+ +A + + R T+S D + R+WDI VRY + EDP+ G P AT F P GK++A+ GK L++ + + +A SP D V V+ KH ++K P++
Sbjct: 88 ILHVLKGHKYGITAAAYSPNGRFLATASSDRSIRLYFRDTLKEKNPKVHQINIEYDHVTAMCFSSDGRSLVIATEN--------------------------GNVKIFQKLRAKPEIVADFPVSH-----------------------KTDVHSVLMNDIGNWATIITCAGDSDTDVKFWNLSGELLQTVNTNQVANYHCVGSKDNRYIAVAAYTPEVKIYEIVREK-TGAFKKVNKIMTLQGHRTGVMDLAFDGSDALPVNRVVTISKDSSVRLWDINVRYTVQEDPKVLSSFNASGDQPFQATD-------FAPNGKILAMVRGKDLVFVRTSDNKEFFTIENAIEDLIKRATFSP-DGSEVLVLGKNCKHIKIYKTPEL 411
BLAST of jgi.p|Trimin1|353851 vs. uniprot
Match: K3WI21_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WI21_GLOUD) HSP 1 Score: 164 bits (416), Expect = 4.960e-42 Identity = 114/376 (30.32%), Postives = 172/376 (45.74%), Query Frame = 1
Query: 355 LRELKGHSETVTSVAFSPDGRFLATSSEDGSIRLIQAATLSDPEP--KTHRIPLSFDHATALAFNDNTKRLAAVTSDYRKCCLFSIPSEAEASRCAREQCPAWGQGSVRMKKGIKPTLMKEFETGHSNPIMEASGAGSSAQFFSLCLAARPDAALVMLLDVEKWMVVVTCGAGSDTIVNLFSVKGEKLTHADTGHIKNNVACASADNRFIAVGCYLPEVTLLEVCRKKQTGEFDKLARAMTLGGHKGQVVGVAINST----TTRAATVSLDGTWRVWDITVRYNLDEDPRCQGTYPLDATKGVPTGIAFGPGGKVVAISAGKRLLYFSAETGAQVGEVADACGTGSIVGLKSPRDAHCVAVVASGNKHAFLWKFPD 1464
L LKGH +T+ A+SP+GRF+AT+S D +IRL TL D + +I + +DH TA+ F+ + K L VT G + K +KP L+ EF H + D V++ D+ W +VTC +DT V +SV G+ L +T + N S DNR+IAV Y PEV + E+ R+K G F K+ + MTL GH+ V+ +A N + TR TV D + R+WDI VRY ++EDP+ + K + + P GK++A + +L+ S G ++ + +A + SP+ V VV KH ++K P
Sbjct: 90 LHVLKGHKYGITAAAYSPNGRFVATASTDRTIRLYLRETLDDKNSSIRPQQITIEYDHVTAMTFSCDGKTLVVVTEG--------------------------GLVKLYQKLRVKPELVSEFSVEH-----------------------KTDVHSVLMNDIGNWATIVTCAGDADTDVKFWSVTGKLLQVVNTNQVANYHCIGSKDNRYIAVAAYTPEVKIFEITREKN-GNFKKVNKIMTLHGHRTGVLDLAFNGSDTVPVTRMITVCKDASVRLWDINVRYVVNEDPKVLSNFTASEQKAYQS-VDLSPNGKLLATARDHDILFVSTSDGKELSTIPNALEDAIKRIVFSPKGDE-VMVVGKNCKHVKIYKAPQ 413
BLAST of jgi.p|Trimin1|353851 vs. uniprot
Match: A0A485L302_9STRA (Aste57867_15007 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L302_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.120e-41 Identity = 114/331 (34.44%), Postives = 157/331 (47.43%), Query Frame = 1
Query: 352 LLRELKGHSETVTSVAFSPDGRFLATSSEDGSIRLIQAATLSDPEPKTHRIPLSFDHATALAFNDNTKRLAAVTSDYRKCCLFSIPSEAEASRCAREQCPAWGQGSVRMKKGIKPTLMKEFETGHSNPIMEASGAGSSAQFFSLCLAARPDAALVMLLDV-EKWMVVVTCGAGSDTIVNLFSVKGEKLTHADTGHIKNNVACASADNRFIAVGCYLPEVTLLEVCRKKQTGEFDKLARAMTLGGHKGQVVGVAINST----TTRAATVSLDGTWRVWDITVRYNLDEDPRCQGTYPLDATKGVPTGIAFGPGGKVVAISAGKRLLYFSAET 1329
L LKGH+ VTS FSP+GRF+AT+S D +IRL TL P I + +DHAT +F+ + K L VT+D + L+ K KP F+ H P+ ++L D+ ++WM +VT G +DT V ++V G+ L I+N S DNRFIAV + PEV + E+ R KQ G FDKL +AM L GHK V+ VA + + T S DG+ R+WDI VRY L+EDP+C TY D V + + G V+A+ G L + +AET
Sbjct: 84 LAHVLKGHTGPVTSTCFSPNGRFIATASTDRTIRLTMRDTLGTKNPVFKTINIPYDHATTCSFSSDGKTLGVVTADGQAVHLYQ-------------------------KFKTKPECSHTFKITHE-PLS------------------------LLLNDIGDEWMTLVTVGKDNDTDVKCWNVHGDLLQSTSINQIQNFHGVQSKDNRFIAVAAFTPEVKIYEIKRTKQ-GSFDKLHKAMALQGHKSGVMDVAFDGSDATPVNHLVTTSKDGSVRLWDINVRYKLEEDPKCIKTYTSDV---VYSTVDMTANGAVIALGHGTELSFLNAET 360
BLAST of jgi.p|Trimin1|353851 vs. uniprot
Match: A0A024UBH5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBH5_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.190e-41 Identity = 110/326 (33.74%), Postives = 153/326 (46.93%), Query Frame = 1
Query: 352 LLRELKGHSETVTSVAFSPDGRFLATSSEDGSIRLIQAATLSDPEPKTHRIPLSFDHATALAFNDNTKRLAAVTSDYRKCCLFSIPSEAEASRCAREQCPAWGQGSVRMKKGIKPTLMKEFETGHSNPIMEASGAGSSAQFFSLCLAARPDAALVMLLDV-EKWMVVVTCGAGSDTIVNLFSVKGEKLTHADTGHIKNNVACASADNRFIAVGCYLPEVTLLEVCRKKQTGEFDKLARAMTLGGHKGQVVGVAINSTTT----RAATVSLDGTWRVWDITVRYNLDEDPRCQGTYPLDATKGVPTGIAFGPGGKVVAISAGKRLLY 1314
L LKGH+ +TS FSP+GRF+AT+S D +IRL +L P I + +D+AT F+ + K L VT+D + L+ K KP + F H D A ++L DV +KWM +VT G DT+V + V G L + I+N S DNRFIAV + PEV + E+ RKK TG FDK+ + M L GH V+ VA + + + T S DG+ RVWDI VRY L+EDP+C TY V + I P GK++A+ G+ + +
Sbjct: 85 LCHVLKGHTGPITSACFSPNGRFIATASTDRTIRLTLRESLGSKNPTFKTINIPYDYATTCTFSSDGKTLGVVTADGQAVMLYH-------------------------KFKTKPECLHTFPIHH-------------------------DVASLLLNDVGDKWMTIVTVGRDDDTVVKCWDVDGALLQSTNIHQIQNFHGMQSKDNRFIAVAAFTPEVKIYEIHRKKGTGAFDKMHKVMALQGHTSGVLDVAFDGSDSTPVNHIVTTSKDGSVRVWDINVRYKLEEDPKCIKTYTSSV---VYSTIDVTPNGKLLALGHGQDVTF 357 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353851 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17890 ID=mRNA_17890|Name=jgi.p|Trimin1|353851|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1530bp|location=Sequence derived from alignment at Contig_188:209965..224552+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAACAGGGGTCGCATGGAGCTGCTGCAGTGGGCGCGCGCCAATGGCTGback to top protein sequence of jgi.p|Trimin1|353851 >Trimin1|353851|estExt_Genemark1.C_Ctg_1880017 ID=Trimin1|353851|estExt_Genemark1.C_Ctg_1880017|Name=jgi.p|Trimin1|353851|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=490bp MNRGRMELLQWARANGCLWKVDESLEFLARIHYIYDARDYISIVSTVEWAback to top mRNA from alignment at Contig_188:209965..224552+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17890 ID=mRNA_17890|Name=jgi.p|Trimin1|353851|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=14588bp|location=Sequence derived from alignment at Contig_188:209965..224552+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_188:209965..224552+ >mRNA_17890 ID=mRNA_17890|Name=jgi.p|Trimin1|353851|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1470bp|location=Sequence derived from alignment at Contig_188:209965..224552+ (Tribonema minus UTEX_B_3156 )back to top |