Trimin1|34801|CE34800_18 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|34801
Unique NameTrimin1|34801|CE34800_18
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length150
Homology
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BLAST of jgi.p|Trimin1|34801 vs. uniprot
Match: A0A835Z8R3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8R3_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 6.690e-24
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0 
Query:  103 GTFFWCRCARSCCSGVCLAAAGRCAVMAGPRRCSCAGVLWQCAALAI 149
            GTFFWCRCARSCCSGVCLAAAGRCAVMAGPRRCSCAGVLWQCAALAI
Sbjct:  103 GTFFWCRCARSCCSGVCLAAAGRCAVMAGPRRCSCAGVLWQCAALAI 149
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|34801 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z8R3_9STRA6.690e-24100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_188contigContig_188:271720..272169 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|34801mRNA_17894Tribonema minus UTEX_B_3156 mRNAContig_188 271700..273942 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|34801|CE34800_18 ID=Trimin1|34801|CE34800_18|Name=jgi.p|Trimin1|34801|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=150bp
MAAACLRRSAAASPSRRSCRRTARRRRRWRQRRRRLRRRSPAALRASPLT
AARTRRAALLLLRRRRQQRRCRRSTPPPPSPTTSRRSRRATRRTRTASSS
EEGTFFWCRCARSCCSGVCLAAAGRCAVMAGPRRCSCAGVLWQCAALAI*
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