mRNA_17087 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353846
Unique Name	mRNA_17087
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835YUX3_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUX3_9STRA)

HSP 1 Score: 1276 bits (3303), Expect = 0.000e+0
Identity = 744/855 (87.02%), Postives = 744/855 (87.02%), Query Frame = 1

Query:    1 MAVNASKRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGI-----------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAAGELELAETRIHATTVADDRKPFGVLDTLVPPSHPSLPRALEALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMRSTLQNSIDLSGCIESLRRNQAPFQCYIRLQHRKWQALSQAHEHKVKQGRILPEHLMYLIHDMLEGFIRSTWKPFERAIQRGLETQGRQMPDFDGLIELLAHRRPADGFNMAQPEGDCVHLEVDWVTTLAHHMLEAEQFTTYDVANLEILVHLYAYYLLP--------------------------------DIANAELGKIAMSGGGDDTEPMKTCVPVPLELNRPMLTILFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRNNLGIPYYASYSNRSTAVTEIFAKTMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFEASLSSRVQNRGKRSQFVAADGEGHGLVDVLRPPPALRPMSLAGSDGGSGGGVAGCGGGAQAIAEMAAAAIANMQHVHAASLQGAXXXXXXXXTTTMQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAQQQQQAQRQWAQQAMFCNFLHMQQRGMYPPYGHPPQMLQSAPIGHNPPQQMLPAAQLPLHMQHSPPGYYHYSQTAAQ 2346
            MAVNASKRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGI                                         TVDTLELETLPRKTAANVTPVNSVIKILSTAA              V   R                 P    ALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMRSTLQNSIDLSGCIESLRRNQAPFQCYIRLQHRKWQALSQAHEHKVKQGRILPEHLMYLIHDMLEGFIRSTWKPFERAIQRGLETQGRQMPDFDGLIELLAHRRPADGFNMAQPEGDCVHLEVDWVTTLAHHMLEAEQFTTYDVANLEILVHLYAYYLLP                                DIANAELGKIAMSGGGDDTEPMKTCVPVPLELNRPMLTILFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRNNLGIPYYASYSNRSTAVTEIFAKTMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFEASLSSRVQNRGKRSQFVAADGEGHGLVDVLRPPPALRPMSLAGSDGGSGGGVAGCGGGAQAIAEMAAAAIANMQHVHAASLQGAXXXXXXXXTTTMQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAQQQQQAQRQWAQQAMFCNFLHMQQRGMYPPYGHPPQMLQSAPIGHNPPQQMLPAAQLPLHMQHSPPGYYHYSQTAAQ
Sbjct:  100 MAVNASKRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGIVRAIADTVTCDRLLPPKQHRYTHLDTSSSYMAICWPGLTQQTVDTLELETLPRKTAANVTPVNSVIKILSTAA--------------VLGRR-----------------PTCASALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMRSTLQNSIDLSGCIESLRRNQAPFQCYIRLQHRKWQALSQAHEHKVKQGRILPEHLMYLIHDMLEGFIRSTWKPFERAIQRGLETQGRQMPDFDGLIELLAHRRPADGFNMAQPEGDCVHLEVDWVTTLAHHMLEAEQFTTYDVANLEILVHLYAYYLLPVRPEALVSNLASQVWAKRTMGPDGCVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPLELNRPMLTILFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRNNLGIPYYASYSNRSTAVTEIFAKTMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFEASLSSRVQNRGKRSQFVAADGEGHGLVDVLRPPPALRPMSLAGSDGGSGGGVAGCGGGAQAIAEMAAAAIANMQHVHAASLQGAXXXXXXXXTTTMQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAQQQQQAQRQWAQQAMFCNFLHMQQRGMYPPYGHPPQMLQSAPIGHNPPQQMLPAAQLPLHMQHSPPGYYHYSQTAAQ 923

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A836CI03_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI03_9STRA)

HSP 1 Score: 1104 bits (2855), Expect = 0.000e+0
Identity = 591/747 (79.12%), Postives = 606/747 (81.12%), Query Frame = 1

Query:    1 MAVNASKRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGI-----------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAA-----------------GELELAETRIHATTVADDRKPFGVLDTLVPPSHPSLPRALEALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMRSTLQNSIDLSGCIESLRRNQAPFQCYIRLQHRKWQALSQAHEHKVKQGRILPEHLMYLIHDMLEGFIRSTWKPFERAIQRGLETQGRQMPDFDGLIELLAHRRPADGFNMAQPEGDCVHLEVDWVTTLAHHMLEAEQFTTYDVANLEILVHLYAYYLLP--------------------------------DIANAELGKIAMSGGGDDTEPMKTCVPVPLELNRPMLTILFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRNNLGIPYYASYSNRSTAVTEIFAKTMKM----PYGEQQDFIASSMKELHSSVSAGKSAYRQFEASLSSRVQNRGKRSQFVAADGEGHGLV-DVLRPPPALRPMSLAGSDGGSGGGVAGCGGGAQAIAEMAAAAIANMQHVHAASLQGAXXXXXXXXTTTMQQM 1956
            MA N  KRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKR SGSR DANEWVR GKYLRPNQPHLHSNGKRTHGI                                         T+DTLELE  PRKTAANVTPVNSVIKILSTAA                  ELELAETRIHATTVADDRKPFGVL+TLVPPSHPSLPRALEALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLM DAQFCLHT+RSTLQN IDLS C ESLRRNQAPFQCYIRLQ +KWQA SQ HEHKV+QGR+LPEHLMYLIHDMLEGFI+STWKPFERAIQRGLE QGRQM DFDGLIELLAHRRPADGFNMAQ EGDC HLEV WVTTLAHH+LEAEQFTTYDVANLEILVHLYAYYLLP                                DIANAELGKIAMSGGGDDTEPMKTCVPVP ELNRPMLT+LFLCRAMRAIHFGTPVPDRLVGLSGGANYQV Q TFREKVLNEIGR+NLGIPYYASYSNRSTAVTEIFAK  KM     +GE QDFI SSMKELHSSV+A KSAYRQFEA  +SRVQNRGKRSQFV ADGE HG+V D  RPPPALRPMSLAGSDGGSGGG AGCGGGAQAIAE+AAAAIANMQHVHAASLQ A        TTTMQQM
Sbjct:  479 MAANVRKRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRKSGSRVDANEWVRKGKYLRPNQPHLHSNGKRTHGIVRAIADAVTCDRLLPPKQHRYTHLDTSSSYMAICWPGLTRQTMDTLELEKFPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLHTIRSTLQNLIDLSRCTESLRRNQAPFQCYIRLQLKKWQAYSQTHEHKVEQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMADFDGLIELLAHRRPADGFNMAQTEGDCAHLEVGWVTTLAHHVLEAEQFTTYDVANLEILVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRAMRAIHFGTPVPDRLVGLSGGANYQVRQGTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKARKMCAEGRWGEAQDFILSSMKELHSSVAAAKSAYRQFEALRASRVQNRGKRSQFVEADGEHHGVVVDAPRPPPALRPMSLAGSDGGSGGGRAGCGGGAQAIAEVAAAAIANMQHVHAASLQDAIASMQNTHTTTMQQM 1225

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835ZB59_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB59_9STRA)

HSP 1 Score: 1025 bits (2651), Expect = 0.000e+0
Identity = 529/613 (86.30%), Postives = 542/613 (88.42%), Query Frame = 1

Query:   19 KRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGITVDTLELETLPRKTAANVTPVNSVIKILSTAA-----------------GELELAETRIHATTVADDRKPFGVLDTLVPPSHPSLPRALEALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMRSTLQNSIDLSGCIESLRRNQAPFQCYIRLQHRKWQALSQAHEHKVKQGRILPEHLMYLIHDMLEGFIRSTWKPFERAIQRGLETQGRQMPDFDGLIELLAHRRPADGFNMAQPEGDCVHLEVDWVTTLAHHMLEAEQFTTYDVANLEILVHLYAYYLLP--------------------------------DIANAELGKIAMSGGGDDTEPMKTCVPVPLELNRPMLTILFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRNNLGIPYYASYSNRSTAVTEIFAKTMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFEASLSSRVQNRGKRSQFV 1710
            KRASKKGSKG RQYVR PTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSR DANEWVR+GKYLRPNQPHLHSNGKRTHGITVDTLELETLPRKTAANVTPVNSVIKILSTAA                  ELELAETRIHATTVADDRKPFGVL+TLVPPSHPSLPRALEALVCSKRG +RPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLM DAQFCL T+RSTLQNSIDLS C ESLRRNQAPFQCYIRLQ +KWQA SQ HEHKVKQGR+LPEHLMYLIHDMLEGFI+STWKPFERAIQRGLE QGRQM +FDGLIELLAHRRPADGFNMAQ EGDC HLEVDWVTTLAHHML AEQFTTYDVANLE+LVHLYAYYLLP                                DIANAELGKIAMSGGGDDTEPMKTCVPVP ELNRPMLT+LFLCR MRAIHFGTPVPDRLVGLSGGANYQVSQ TFREKVLNEIGR+NLGIPYYASYSNRSTAVTEIFAK MKMPYGEQQDFIASSMKELHSSVSAGKSAYRQF+ASL+SRVQNRGKRSQF 
Sbjct:   84 KRASKKGSKG-RQYVRAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPHLHSNGKRTHGITVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGADRPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLRTIRSTLQNSIDLSRCTESLRRNQAPFQCYIRLQLKKWQAHSQTHEHKVKQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMANFDGLIELLAHRRPADGFNMAQTEGDCAHLEVDWVTTLAHHMLGAEQFTTYDVANLEVLVHLYAYYLLPVRPEALMSNLASQVWAKMTTGPDGRVSFILFQDIANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRTMRAIHFGTPVPDRLVGLSGGANYQVSQHTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKAMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFKASLTSRVQNRGKRSQFT 695

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A836CJR7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJR7_9STRA)

HSP 1 Score: 988 bits (2555), Expect = 0.000e+0
Identity = 610/825 (73.94%), Postives = 629/825 (76.24%), Query Frame = 1

Query:   64 RTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGI-----------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAA-----------------GELELAETRIHATTVADDRKPFGVLDTLVPPSHPSLPRALEALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMRSTLQNSIDLSGCIESLRRNQAPFQCYIRLQHRKWQALSQAHEHKVKQGRILPEHLMYLIHDMLEGFIRSTWKPFERAIQRGLETQGRQMPDFDGLIELLAHRRPADGFNMAQPEGDCVHLEVDWVTTLAHHMLEAEQFTTYDVANLEILVHLYAYYLLP--------------------------------DIANAELGKIAMSGGGDDTEPMKTCVPVPLELNRPMLTILFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRNNLGIPYYASYSNRSTAVTEIFAKTMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFEASLSSRVQNRGKRSQFVAADGEGHGLVDVLRPPPALRPMSLAGSDGGSGGGVAGCGGGAQAIAEMAAAAIANMQHVHAASLQGAXXXXXXXXTTTMQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAQQQQQAQRQWA-QQAMFCNFLHMQQRGMYPPYGHPPQMLQSA---PIGHNP 2256
            R PTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGI                                         TVDTLELE LP+KT AN TPVNSVIKILSTAA                  ELELAETRIHATTVADDRKPFGVL+TL+PPSHPSLPRALEALVCSKRG ERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLM DAQFCLHT+RSTLQNSIDLS C ESLRRNQAPFQCYIRLQ +KWQA SQ HEHKV+QGR+LPEHLMYLIHDMLEGFI+STWKPFERAIQRGLE QGRQM DFDGLIE LA+RRPADGFNMAQ EGDC HLEV WVTTLAHHMLEAEQFT YDVANLEILVHLYAYYLLP                                DIANA+LGKIAMSGGGDDTEPMKTCVPVP ELNRPMLT+LFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQ TFREKV NEIGR+NLGIPYYASYSNRSTAVTEIFAK  KM                                   +  + RGKRSQF   DGE HG+VD  RPPPALRPMSLAGS+G SGGGV                    MQHVHAASLQGAXXXXXXXX TTMQQM XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LAQQQQQA      QQA+  NFL+MQQRGMY PYGHPPQMLQSA    IGH+P
Sbjct:  556 RAPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGIVCAIADAATCDRLVPPKQHRYTHLDTSSSYMAICWPGLTQQTVDTLELEKLPKKTVANRTPVNSVIKILSTAAVLGRLPTCASGAVMLNQEELELAETRIHATTVADDRKPFGVLETLIPPSHPSLPRALEALVCSKRGAERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLHTIRSTLQNSIDLSRCTESLRRNQAPFQCYIRLQLKKWQAYSQTHEHKVEQGRMLPEHLMYLIHDMLEGFIKSTWKPFERAIQRGLEAQGRQMADFDGLIERLANRRPADGFNMAQTEGDCAHLEVGWVTTLAHHMLEAEQFTMYDVANLEILVHLYAYYLLPVRPEALMSNLASQIWAKMTTGPDGRVSFILFQDIANAKLGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQNTFREKVPNEIGRSNLGIPYYASYSNRSTAVTEIFAKARKM----------------------------------CAEGRTRGKRSQFTE-DGEHHGVVDAPRPPPALRPMSLAGSEGCSGGGVXXXXXXXXXXXXXXXXXXXXMQHVHAASLQGAXXXXXXXXXTTMQQMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYLAQQQQQAXXXXXXQQALLFNFLYMQQRGMYAPYGHPPQMLQSAHTPAIGHHP 1345

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835ZAC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC7_9STRA)

HSP 1 Score: 976 bits (2522), Expect = 0.000e+0
Identity = 607/870 (69.77%), Postives = 656/870 (75.40%), Query Frame = 1

Query:   19 KRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGI-----------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAA-------------------GELELAETRIHATTVADDRKPFGVLDTLVPPSHPSLPRALEALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMRSTLQNSIDLSGCIESLRRNQ--APFQCYIRLQHRKWQALSQAHEHKVKQGRILPEHLMYLIHDMLEGFIRSTWKPFERAIQRGLETQGRQMPDFDGLIELLAHRRPADGFNMAQPEGDCVHLEVDWVTTLAHHMLEAEQFTTYDVANLEILVHLYAYYLLP--------------------------------DIANAELGKIAMSGGGDDTEPMKTCVPVPLELNRPMLTILFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRNNLGIPYYASYSNRSTAVTEIFAKTMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFEASLSSRVQNRGKRSQFVAADGEGHGLVDVLRPPPALRPMSLAGSDGGSGGGVAGCGGGA-QAIAEMAAAAIANMQHVHAASLQ---GAXXXXXXXXTTTMQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAQQQQQ-AQRQWAQQAMFCNFLHMQQRGMYPPYGHPPQMLQSA---PIGHNPPQQMLPAAQLPLHMQHSPPGYY 2322
            K   K+G KGK  +VRTPTRTELLSLSDVLKRAEP QG+MPLCEAWGT+LLQRACLVFEGMLV+HVYLTD+KVK+ SGSR DANEWVR GKYLRPNQPHLHS+GKRTHGI                                         T+ TLELE  P KTA+N+ PVNSVIKILSTAA                    ELELA +RIHATTVADDR+PFG+L+TLV PSHP LP ALEALVCS+ G ER P CVVNSTPMARMEMWFLSADTNSGEAARS +AY NLM +AQFC HT+RS L+NSIDLS C E LR++Q  APFQCYIRLQ +KWQA SQ HEHKV QGR+LPEHLMYLIHDMLEGFI  TWKPFERAIQRGL  QGRQM DFDGL+ +LA RR ADGFNMAQ +G C HLEVDWV TLAHHMLE EQFTTYDVANLEILVHLYAYYLLP                                +IANAELG +A +GG DD+EPMKTCVPVP ELNRPMLT+LFLCRAMR IHFG+PVPDRLVGLSGG+N+QV   TFR+KVLNEIGR NLGIPYYASYSNRSTAVTEI+A   KMP+GE QDFIASSMKELHSSV+AG+SAYRQF   L+S+VQNRGKR  FV A GE +   DV  PPPALRP  LAGSD GSG           QAIAEMAAAAIANMQ VHA S+Q   G XXXXXXXX     QM   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LAQQQQQ AQ+Q AQQAMF N+L+MQQ GMY PYGHPPQMLQSA    IGH P   +LPAAQ+PLHMQHSP GYY
Sbjct:  557 KSTGKRGGKGKAPHVRTPTRTELLSLSDVLKRAEPEQGVMPLCEAWGTFLLQRACLVFEGMLVLHVYLTDSKVKKKSGSRLDANEWVRKGKYLRPNQPHLHSDGKRTHGIVRAIADSVTCDRLLPPTQHRYSHLNTSSSYLSLCWPGLTQQTISTLELEGNPGKTASNIPPVNSVIKILSTAAVLGRLPTCASGAVMLTQPEDELELAASRIHATTVADDRQPFGILETLVSPSHPLLPPALEALVCSEAGRERAPACVVNSTPMARMEMWFLSADTNSGEAARSPAAYNNLMSEAQFCRHTIRSILKNSIDLSACTERLRQDQMIAPFQCYIRLQLKKWQATSQTHEHKVDQGRMLPEHLMYLIHDMLEGFIERTWKPFERAIQRGLVLQGRQMADFDGLVNILAQRRRADGFNMAQTDGGCAHLEVDWVKTLAHHMLEQEQFTTYDVANLEILVHLYAYYLLPVRPESLMCNLASQVWARMTTGPDGRVFFSIFQEIANAELGTVANTGGCDDSEPMKTCVPVPEELNRPMLTVLFLCRAMRTIHFGSPVPDRLVGLSGGSNHQVGDNTFRDKVLNEIGRCNLGIPYYASYSNRSTAVTEIYAAASKMPFGEAQDFIASSMKELHSSVAAGQSAYRQFLLLLTSKVQNRGKRHNFVEATGEAN--ADVPHPPPALRPRFLAGSDVGSGXXXXXXXXXXXQAIAEMAAAAIANMQIVHATSMQQMQGXXXXXXXXXXXXXXQMQATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYLAQQQQQLAQQQRAQQAMFFNYLYMQQCGMYLPYGHPPQMLQSAHTPAIGHKPQNLVLPAAQVPLHMQHSP-GYY 1423

[Close]

BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A836CI45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI45_9STRA)

HSP 1 Score: 951 bits (2457), Expect = 0.000e+0
Identity = 480/534 (89.89%), Postives = 490/534 (91.76%), Query Frame = 1

Query:   16 SKRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGITVDTLELETLPRKTAANVTPVNSVIKILSTAA-----------------GELELAETRIHATTVADDRKPFGVLDTLVPPSHPSLPRALEALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMRSTLQNSIDLSGCIESLRRNQAPFQCYIRLQHRKWQALSQAHEHKVKQGRILPEHLMYLIHDMLEGFIRSTWKPFERAIQRGLETQGRQMPDFDGLIELLAHRRPADGFNMAQPEGDCVHLEVDWVTTLAHHMLEAEQFTTYDVANLEILVHLYAYYLLPDIANAELGKIAMSGGGDDTEPMKTCVPVPLELNRPMLTILFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRNNLGIPYYASYSNRSTAVTEIFAKTMKM 1566
            SKRASKKGSKGK+QY RTPTRTELLSLSDVLK AEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSR DANEWVR+GKYLRPNQP LHSNGKRTHGITVDTLELE LPRKTAANVTPVNSVIKILSTAA                  ELELAETRIHATTV DDRKPF VL+TLVPPSHPSLPRALEALVCS+RGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLM DAQFCLHT+RSTLQNSIDLS C ESLRRNQAPFQCY RLQ RKWQA SQ HEHKV+QGRILPEHLMYLIHDMLEGFI+STWKPFE AIQRGLE QGRQM DFDGLIELLAH RPADGFNMAQ EGDC HLEVDWV TLAHHMLEAEQFTTYDVANLEILVHLYAYYLLPD+ANAELGKIAMSGGGDDTEPMKTCVPVP ELNRPMLT+LFLCRAMRAIHFGTPVPDRLVGLSGGANYQV Q TFREKVLNEIGR+NLGIPYYASYSNRSTAVTEIFAK  KM
Sbjct:  461 SKRASKKGSKGKQQYARTPTRTELLSLSDVLKCAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRIDANEWVRNGKYLRPNQPRLHSNGKRTHGITVDTLELEALPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVPDDRKPFDVLETLVPPSHPSLPRALEALVCSQRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMSDAQFCLHTIRSTLQNSIDLSECTESLRRNQAPFQCYFRLQLRKWQAHSQTHEHKVEQGRILPEHLMYLIHDMLEGFIKSTWKPFESAIQRGLEAQGRQMADFDGLIELLAHHRPADGFNMAQTEGDCAHLEVDWVATLAHHMLEAEQFTTYDVANLEILVHLYAYYLLPDVANAELGKIAMSGGGDDTEPMKTCVPVPSELNRPMLTVLFLCRAMRAIHFGTPVPDRLVGLSGGANYQVRQGTFREKVLNEIGRSNLGIPYYASYSNRSTAVTEIFAKARKM 994

[Close]

BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A836CHY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY4_9STRA)

HSP 1 Score: 931 bits (2406), Expect = 0.000e+0
Identity = 487/610 (79.84%), Postives = 504/610 (82.62%), Query Frame = 1

Query:   19 KRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGI-----------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAA-----------------GELELAETRIHATTVADDRKPFGVLDTLVPPSHPSLPRALEALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMRSTLQNSIDLSGCIESLRRNQAPFQCYIRLQHRKWQALSQAHEHK------------------------VKQGRILPEHLMYLIHDMLEGFIRSTWKPFERAIQRGLETQGRQMPDFDGLIELLAHRRPADGFNMAQPEGDCVHLEVDWVTTLAHHMLEAEQFTTYDVANLEILVHLYAYYLLPDIANAELGKIAMSGGGDDTEPMKTCVPVPLELNRPMLTILFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRNNLGIPYYASYSNRSTAVTEIFAKTMKMPYGEQQDFIASS 1602
            KRASKKGSKGK+QYVRTPTRTELLSLSDVLKRAEPAQGI PLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKR SGSR DANEWVR GKYLRPNQPHLHSNGKRTHGI                                         TVDTLELETLPRKTAANVTPVNSVIKILSTAA                  ELELAETRIHATTVADDRKPFGVL+TLVPPSHPSLPRALEALVCSKRGGER PVCVVNSTPMARMEMWFLSADTNSGE ARSQSAYCNLM DAQFCLHT+RSTLQNS+DLSGC ESLR+NQAPFQ Y RLQ +KWQA SQAHEH                         VKQGR+LPE+LMY IHDMLEGFIRSTWKPF+RAIQRGLETQGR+M DFDGLI+LLAHRRPADGFNMAQ EGDC HLEVDWVT LAHHMLEAEQFTTYDVANLEILVHLYAYYLLPDIANAELGK+AMSGG DD+EPMKT VPVP ELNRPMLT+LFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGR NLGIPYYASYSNRSTAVTEIFAK M+MP+GE+QDFIASS
Sbjct:  630 KRASKKGSKGKQQYVRTPTRTELLSLSDVLKRAEPAQGITPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRKSGSRVDANEWVRKGKYLRPNQPHLHSNGKRTHGIVRAIANAVTCDRLLPRKQHRYTHLDTSSSYMAFCWPGLSQQTVDTLELETLPRKTAANVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQEELELAETRIHATTVADDRKPFGVLETLVPPSHPSLPRALEALVCSKRGGERAPVCVVNSTPMARMEMWFLSADTNSGEGARSQSAYCNLMSDAQFCLHTIRSTLQNSLDLSGCTESLRQNQAPFQRYTRLQLKKWQARSQAHEHXXXXXXXXXXXXXXXXXXXXXXXXXVKQGRMLPENLMYRIHDMLEGFIRSTWKPFDRAIQRGLETQGRRMADFDGLIQLLAHRRPADGFNMAQTEGDCAHLEVDWVTALAHHMLEAEQFTTYDVANLEILVHLYAYYLLPDIANAELGKVAMSGGDDDSEPMKTYVPVPSELNRPMLTVLFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRCNLGIPYYASYSNRSTAVTEIFAKAMQMPFGEKQDFIASS 1239

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835Z3D5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3D5_9STRA)

HSP 1 Score: 882 bits (2280), Expect = 3.690e-301
Identity = 556/862 (64.50%), Postives = 614/862 (71.23%), Query Frame = 1

Query:   10 NASKRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGI-------------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAA-----------------GELELAETRIHATTVADDRKPFGVLDTLVPPSHPSLPRALEALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMRSTLQN---SIDLSGCIESLRRNQAPFQCYIRLQHRKWQALSQAHEHKVKQGRILPEHLMYLIHDMLEGFIRSTWKPFERAIQRGLETQGRQMPDFDGLIELLAHRRPADGFNMAQPEGDCVHLEVDWVTTLAHHMLEAEQFTTYDVANLEILVHLYAYYLLP--------------------------------DIANAELGKIAMSGGGDDTEPMKTCVPVPLELNRPMLTILFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRNNLGIPYYASYSNRSTAVTEIFAKTMKMPYGEQQDFIASSMKELHSSVSAGKSAYRQFEASLSSRVQNRGKRSQFVAADGEGHGLVDVLRPPPALRPMSLAGSDGGSGGGVAGCGGGAQAIAEMAAAAIANMQHVHAASLQGAXXXXXXXXTTTMQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAQQQQQAQRQWAQ----------------QAMFCNFLHMQQRGMYPPYGHPPQMLQSAPI---GHN 2253
            + SKRA +   KGKR  VRTPTRTELLSLSDVLKRAEP QG+ PLC+AWGT+LLQRACLVFEGMLV+HVYLTD+KVKR S SR D NEW R GKYLR NQ HLHS+GKRTHGI                                           T+ TLELE  P KT A   PVNS+IKILSTAA                  EL+LA +RIHATTVADDR+PFGVL+TLVPPSHPSLP ALEALVCS+ GG R P CVVNSTPMARM+MWFLSADTNSGEAARS SAY NLM +AQFC HT+RS ++N   SIDL+ C + LR +Q    CYIR+Q +KWQA SQ HEH V QGR+LPEHLMYLIHDML G I  TWKPFERAIQ GLE  GRQM D DGL+ +LA RR  DGFNMAQ +GDC HLEVDWVTTLAHHMLE EQFTTYDVANLEILVHL+AYYLLP                                 +   ELGKIAM+GGG+D+EPMKTCVPVP ELNRPMLT+LFLCRAMR IHFG+P PDRLVGLSGG+N+QV++ TFR+KVLNEIGR NLGIPYYASYSNR TAVTEIFA    +P+GEQQDFIASSMKELHSS++AG++AYRQF  SL S+VQNRGKR +FV   GEG+  VDV RPPPALRPMSLAGSDG         G  AQAIAEMAAAAI NMQ++H                T++Q  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    LAQQQQQ  +                    +AMF NFL+MQQRGMYPPYGHPP M+QSA     GHN
Sbjct:  694 STSKRAGQ--GKGKRPAVRTPTRTELLSLSDVLKRAEPEQGVTPLCKAWGTFLLQRACLVFEGMLVLHVYLTDSKVKRKSTSRLDPNEWTRKGKYLRDNQRHLHSDGKRTHGIVRAIADSITCDHLLPPTQHRYTHLNTSGKGSYLSMCWPGVTQQTISTLELEIHPEKTVATG-PVNSIIKILSTAAVLGRLPTCASGAVMLTQDELKLALSRIHATTVADDRQPFGVLETLVPPSHPSLPPALEALVCSEAGGVRAPACVVNSTPMARMDMWFLSADTNSGEAARSPSAYNNLMSEAQFCRHTIRSIMKNAIDSIDLTKCTDRLREDQ----CYIRVQLKKWQATSQTHEHNVDQGRMLPEHLMYLIHDMLAGLIERTWKPFERAIQLGLELHGRQMADLDGLVNILARRRRVDGFNMAQTDGDCAHLEVDWVTTLAHHMLEEEQFTTYDVANLEILVHLHAYYLLPVRPESLMGNLVSQVWARRTTGADGRVASTCFRRLPTRELGKIAMTGGGEDSEPMKTCVPVPEELNRPMLTVLFLCRAMRTIHFGSPPPDRLVGLSGGSNHQVAENTFRDKVLNEIGRCNLGIPYYASYSNRCTAVTEIFAVASTLPWGEQQDFIASSMKELHSSIAAGQTAYRQFLLSLDSKVQNRGKRHRFVEPTGEGN--VDVPRPPPALRPMSLAGSDGXXXXXXXXXG--AQAIAEMAAAAITNMQNLH---------------RTSIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRAYLAQQQQQLAQXXXXXXXXXXXXXXXXXXXXEAMFLNFLYMQQRGMYPPYGHPPPMMQSAHTPANGHN 1529

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835Z1J2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1J2_9STRA)

HSP 1 Score: 484 bits (1247), Expect = 5.610e-163
Identity = 247/337 (73.29%), Postives = 272/337 (80.71%), Query Frame = 1

Query:  631 MARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMRSTLQNSIDLSGCIESLRRNQAPFQCYIRLQHRKWQALSQAHEHKVKQGRILPEHLMYLIHDMLEGFIRSTWKPFERAIQRGLETQGRQMPDFDGLIELLAHRRPADGFNMAQPEGDCVHLEVDWVTTLAHHMLEAEQFTTYDVANLEILVHL---------YAYYLLPDIANAELGKIAMSGGGDDTEPMKTCVPVPLELNRPMLTILFLCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRNNLGIPYYASYSNRSTAVTEIFAKTMKM----PYGEQQDFIASS 1602
            MAR+EMW +SAD NSGEA+R+ S+Y NL    Q CLHT+RSTL+NSIDLS C ESLR+NQAPFQC+IRLQ RKWQA SQ  EHKV QGR+LPEHLMYLIHDMLEGFI+ TWKPFERAIQRGLE QGRQM DFD L++ L HRR ADGF+MAQ +GDC HL+VDWVT LAHHMLE EQFTTYDVANLEILV            +Y    DIANAELGKIAMSGGGDD EPMKTCVPVP ELNRPMLT+LFLCRAMR I FG+  PDRLVGLSGG N+QV + TFR KVLNEIGR NLGIP+YA+YSNRSTAVTEI+    KM     +GE QDFI SS
Sbjct:    1 MARVEMWLISADINSGEASRAPSSYNNL---TQICLHTIRSTLKNSIDLSACTESLRQNQAPFQCFIRLQLRKWQAHSQTPEHKVNQGRMLPEHLMYLIHDMLEGFIQITWKPFERAIQRGLELQGRQMADFDALVKSLTHRRAADGFDMAQRDGDCAHLQVDWVTKLAHHMLEVEQFTTYDVANLEILVWAKMMVGQDGRVSYSRFQDIANAELGKIAMSGGGDDGEPMKTCVPVPAELNRPMLTVLFLCRAMRTIRFGSAAPDRLVGLSGGCNHQVKENTFRNKVLNEIGRCNLGIPFYAAYSNRSTAVTEIYEAARKMCAEGRWGEAQDFIISS 334

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835YVB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB5_9STRA)

HSP 1 Score: 345 bits (886), Expect = 6.580e-103
Identity = 191/314 (60.83%), Postives = 214/314 (68.15%), Query Frame = 1

Query:    7 VNASKRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCEAWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLRPNQPHLHSNGKRTHGI-----------------------------------------TVDTLELETLPRKTAANVTPVNSVIKILSTAA-----------------GELELAETRIHATTVADDRKPFGVLDTLVPPSHPSLPRALEALVCSKRGGERPPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMRSTLQNSID 774
            V A    S++   G    VRTPTRTELLSLSDVLKRAEP QG+MPL EAWG +LLQRACLVFE MLV+H YLTD+KVK+ SGSR DANEWVR GKYLR NQP LHS+GKRTHGI                                         T+ TLELE  P KTA+NVTPVNSVIKILSTAA                  ELELA +RIHATTVAD R+PFGVL+TL PPSHPSLP ALEALVC++ GG+  P C+ NSTP+ARMEMWFLSADTNSGEA RS +AY NLM +AQFC HT+RS L+NSI+
Sbjct:  479 VTAPSTGSERNDNGMASNVRTPTRTELLSLSDVLKRAEPEQGVMPLWEAWGIFLLQRACLVFEVMLVLHTYLTDSKVKKKSGSRLDANEWVRKGKYLRRNQPQLHSDGKRTHGIVRAIADSVTCDRLLPPTQHRYSHLDTSRSYLSLCWPGLTQQTISTLELERHPGKTASNVTPVNSVIKILSTAAVLGRLPTCASGAVMLTQDELELATSRIHATTVADHRQPFGVLETLAPPSHPSLPPALEALVCTEAGGKCAPACIFNSTPIARMEMWFLSADTNSGEAVRSPAAYNNLMSEAQFCRHTVRSMLKNSIE 792

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A836CJ81_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ81_9STRA)

HSP 1 Score: 680 bits (1755), Expect = 9.380e-248
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 1

Query:    1 MRCDGNVVGVSGHGIQPSFRSNITHHYQLREEDLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCGLRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLRDVDVQP 972
            MRCDGNVVGVSGHGIQPSFRSNITHHYQLREEDLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCGLRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLRDVDVQP
Sbjct:    1 MRCDGNVVGVSGHGIQPSFRSNITHHYQLREEDLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCGLRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLRDVDVQP 324

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A836CJZ7_9STRA (Sulfotransferase family-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ7_9STRA)

HSP 1 Score: 333 bits (853), Expect = 4.730e-110
Identity = 175/285 (61.40%), Postives = 204/285 (71.58%), Query Frame = 1

Query:   85 LREEDLA-DHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERR-------PPGNRQLLGWSPL-ALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWG 909
            LRE D A DHL++VPEYK+IFC IAKVSS++FNDL RSLRAPFDP MLEG  +GRIIPFGRNSY SHNWSLQ+LT A++D  W+KAVFYREPLTRFVSAY++KC +R       PP NR+   WSPL            C R FG+  P+F  VV+RL ++PR+ + HWR QHEFCG L   I EF FVE+L+R TSREKV ELL+ A VP+  F +D AFN  FP  A GD S   +P  H TNADA   SYYT YLAC+VFQYYYDDY LF M +P WAR WG
Sbjct:   76 LREGDFALDHLLIVPEYKLIFCFIAKVSSLSFNDLLRSLRAPFDPGMLEGEAYGRIIPFGRNSYRSHNWSLQDLTDALHDPAWLKAVFYREPLTRFVSAYRDKCGKRTHGARGLPPRNRRRRAWSPLHERKANHKHDKICLRSFGEDWPSFETVVDRLLREPRVTDPHWRRQHEFCGGLDRFIGEFQFVEVLERATSREKVGELLARAHVPN--FNSDAAFNLRFPPTAPGDAS--RDP--HATNADAAARSYYTPYLACVVFQYYYDDYALFGMQLPEWARAWG 354

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835YXU8_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXU8_9STRA)

HSP 1 Score: 268 bits (686), Expect = 1.140e-84
Identity = 140/292 (47.95%), Postives = 179/292 (61.30%), Query Frame = 1

Query:   97 DLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAA----EPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLRD 957
            DL DHL+V+PE+K++FC IAK + ++FNDLFRSLR  +DPS+ EG  FGR      NSY +HN +L+ LT+ V D  W KAVFYREPL RFVSA++ KC R P                   G+  C   FG+++P FTEVV RL + P + N HWRPQ +FCG L  ++ EF  +E LD RTSREKV +LL    + D + +   AFN  FP     DP        E  +HTTNAD+ V  YYT YLAC VFQYY DDY+LF +  P W R+W F+   W   DC+TL++
Sbjct:  100 DLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGR------NSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHA-----------------GNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESI--PAFNERFPPP---DPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLKE 363

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835Z0T9_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T9_9STRA)

HSP 1 Score: 263 bits (673), Expect = 1.880e-83
Identity = 143/302 (47.35%), Postives = 181/302 (59.93%), Query Frame = 1

Query:   64 NITHHYQLREEDLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAA----EPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLR 954
            N TH  QL   DLADHL+V+PE+K++FC IAK + ++FNDLFRSLR  +DPS+ EG  FGR      NSY +HN +L+ LT+ + D  W KAVFYREPL RFVSAY+ KC R                  +  G+  C   FG +HP F  VV+RL ++P IEN HWRPQ +FCG L  I+ EF  +E LD RTSREKV +LL    + D + +   AFN  FP     DP        +  +HTTNAD+ V  YYT + AC VFQYY DD++LF +  P W RQW F+   W   DC  L+
Sbjct:   36 NRTHPVQL-PGDLADHLLVIPEHKLLFCYIAKNNCLSFNDLFRSLRERYDPSLAEGPSFGR------NSYTNHNMTLEQLTEYIYDPTWHKAVFYREPLVRFVSAYRSKCVRE-----------------KHAGNEVCQSQFGIKHPLFKSVVKRLTREPPIENPHWRPQADFCGGLSGILSEFQTIEPLDARTSREKVAKLLKQVGIEDPESI--PAFNERFPPP---DPETGVWRPEQSPFHTTNADSVVAEYYTPFTACTVFQYYLDDFLLFGIPAPEWTRQWDFHAQHWTTGDCKPLQ 308

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835Z7D4_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7D4_9STRA)

HSP 1 Score: 221 bits (562), Expect = 9.050e-66
Identity = 129/291 (44.33%), Postives = 166/291 (57.04%), Query Frame = 1

Query:   97 DLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQR-HPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKW-HTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQ--WGFYVDGWEMKDCSTLR 954
            DL DH I+VPE+K++FC IAKV+S AFN LFRSLR+ +DP M EG      + FG N+Y  HN ++  + + V++  W KAVFYREPL RF+SA+K KCE+   G  + L              S C+ +      P F ++VERL Q PRI N HWRPQ +FCG L  II +   V+ LD  TSR +V ELL    V          F   FP     + S  A   W H+ +ADA+V   Y+ YLAC VFQY+ DDY+LF + VP W RQ  W F+   W   DC +LR
Sbjct:  121 DLMDHWIIVPEHKLMFCFIAKVNSAAFNQLFRSLRSRYDPQMAEGK-----VAFGLNNYLYHNMTVSQVAELVHNPSWHKAVFYREPLVRFLSAWKSKCEK---GVIRDL--------------SMCADVLHMSVAPDFPQIVERLWQSPRIVNPHWRPQVDFCGGLTGIIDQIQTVKRLDLTTSRAEVSELLQQVGVDPADV---PMFETRFPPLMQEEGSDGAGLHWDHSFHADASVQQAYSPYLACRVFQYFIDDYLLFGIPVPAWTRQHKWDFHRQNWSSGDCESLR 386

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835Z974_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z974_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.280e-57
Identity = 133/302 (44.04%), Postives = 155/302 (51.32%), Query Frame = 1

Query:   97 DLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRI---------IPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQ-RHPTFTEVVERLQQ---QPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDT-----------------AFNAHFPAAAAGDPSVAAEPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWG 909
            DL DHLIVVPE+K++FC IAK +S+AFNDLFRSLR   DPSM                  + FGRN+YA HN SL+ LT  V D  W KAVFYREPL RFVSAY+ KC+R    +  L                 C R+FG  +HP F+ V +RL      P   N HWRPQ EFCG L   + E+  VE LD R SRE V +LLS   V D    N                    FN HFP   AG    A     H T+AD  V  YYT   AC V +YY DDY+LF + VP   R  G
Sbjct:  223 DLVDHLIVVPEHKLLFCFIAKCNSLAFNDLFRSLRERHDPSMNTPESXXXXXXXXMADDSVKFGRNTYAYHNLSLEELTDRVYDPSWHKAVFYREPLVRFVSAYRSKCDRDSQEDGVL-----------------CKRVFGLGKHPRFSAVTQRLSDAAAHPIDANPHWRPQTEFCGGLAETLAEYQTVEALDARDSRENVAKLLSDIGVADPPNFNKXXXXXXXXXXXXXXESIPVFNLHFPPPDAGPD--AGPHNHHATHADDKVQRYYTPRRACTVVRYYLDDYLLFGVPVPALRRAAG 505

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835YPV5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV5_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.900e-52
Identity = 115/270 (42.59%), Postives = 148/270 (54.81%), Query Frame = 1

Query:  172 AFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKW--------HTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLR 954
            +FN LF SLR+ +D S+LEG  +GR      N   SHN +L  L   V D  W KAVFYREPL R++SAY+ KCE         +G           G   C+ +FG+ +PTF E VERL Q P ++N H+RPQ +FCG L  I+ +F  VE LD RTSR+ V  LL    V D + +   AFN  FP      P  AA   W        HTT+A A V++YYT YLAC+V  ++ DDY+ F + VP WA + G    G    DC+ LR
Sbjct:    9 SFNHLFTSLRSRYDESLLEGDIWGR------NDMHSHNMTLPQLADLVYDDTWHKAVFYREPLVRYLSAYRSKCE---------VGHDD--------GFELCTALFGKPNPTFAEAVERLTQDPPVDNPHFRPQVDFCGGLGAILPQFQTVEALDPRTSRDAVAALLRRVGVADPEGV--PAFNERFP------PFDAAAGAWRPNDSYARHTTDAAAAVEAYYTPYLACVVVTHFLDDYLTFGVAVPEWAWRLGLRDVGG---DCAALR 244

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BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835Z3G3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3G3_9STRA)

HSP 1 Score: 177 bits (448), Expect = 5.380e-49
Identity = 121/361 (33.52%), Postives = 158/361 (43.77%), Query Frame = 1

Query:  157 KVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFC-GLRNIIQEFNFVEL--------------------------------------------------------------------------------------LDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKW--------HTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLR 954
            +V+ +AFN LF SLR+ +DPS+LEG  + R       S+  H   L+ LT+ + D  W KAVFYREPL RF+SAY+ KCE    G+                G+  C + FG+ +PTF E VERL  QP I N HWRPQ +FC GL  I  +F  +                                                                                        LD RTSR+KV +LL    + D + +   AFN  FP     DP      +W        HTTNA++ V++YYT YLAC VFQY+ DDY+LF + VP W R+W F+   W   DC+TLR
Sbjct:   40 EVNCLAFNKLFNSLRSRYDPSLLEGPAWNRT------SHVQHRIKLKTLTRMIYDPTWHKAVFYREPLARFLSAYRSKCES---GHDD--------------GAELCEQEFGKPNPTFEEAVERLVTQPYIWNPHWRPQVDFCSGLSAITSQFLALNAITDAQSSNCAHYRERSRMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPPHPHCHTAVNAHAXXXXXXXXXXXXXXXXXXXXXXLDARTSRDKVTQLLHRVGIEDAETI--PAFNERFPPL---DPETG---EWRPHALHSNHTTNAESAVEAYYTPYLACRVFQYFIDDYILFGIPVPAWTRKWDFHAQHWATADCATLR 369

[Close]

BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835Z948_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z948_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.690e-46
Identity = 116/319 (36.36%), Postives = 161/319 (50.47%), Query Frame = 1

Query:    1 MRCDGNVVGVSGHGIQPSFRSNITHHYQLREEDLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFP--AAAAGDPS---------------VAAEP-KWHTTNADATVDSYY-TRYLACIVFQYYYDDYVLFEMDVPVWA 897
            MRC G+ V  + H   P+             ++L  H I+VPE K++FC I KV   +FNDLFRS R+ +DP   +G +     P+  N+  +HN S  ++ + V D  W KAVF+REPL RF+SA++ KCE     +R+                  C+  FG + P F   ++RL+Q P I +AHWRPQ +FCG L + +  F  VE LD  TS EKV  LL    V         AF+ HFP  A++  D S                 A P + H T+A   +  YY +  +AC V QYY DDY+LF + +P WA
Sbjct:   26 MRCTGDGVTTAAHVTAPAPVM----------DNLYQHWIIVPEIKLLFCFIEKVGCESFNDLFRSYRSRWDPRQAKGRK-----PWRLNNMKAHNMSEADVDRLVLDETWHKAVFFREPLERFLSAFRSKCEPGHDTDRE-----------------HCTDTFGSKDPPFAVAIDRLRQAPPITDAHWRPQSDFCGGLPSKLSHFQTVEQLDPATSHEKVSALLHTLGVQPESI---PAFHRHFPRPASSVADSSGTXXXXXXXXGAKQKAGAVPNETHLTHAADALRKYYLSPAMACAVVQYYIDDYLLFGIALPQWA 309

[Close]

BLAST of jgi.p|Trimin1|353846 vs. uniprot
Match: A0A835YYQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.150e-35
Identity = 77/195 (39.49%), Postives = 106/195 (54.36%), Query Frame = 1

Query:   91 EEDLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLS 672
            + +L +  I+VPE+K++FC I KV   +FN LF+SLRA +DP+            +G N+  +HN +  ++   V D  W KAVFYREPL RF+SA++ KCE    G+RQ                  C+  FG   P F   V+RL QQ  I +AHWR Q  FCG L++ +  F  VE LD  TSR+K    L+
Sbjct:   46 KSNLYNKWIIVPEHKLLFCFIEKVGCKSFNQLFKSLRARYDPTQAAAG------VWGSNNMTAHNLTEADIDAYVEDPLWHKAVFYREPLVRFLSAFRSKCEPHHDGDRQ-----------------HCTATFGSEQPPFAAAVDRLSQQQPITDAHWRRQIHFCGGLQSKLVHFQTVEQLDAITSRQKCTRCLA 217

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353846 vs. uniprot
BLAST of jgi.p|Trimin1|353846 vs. uniprot

BLAST of jgi.p|Trimin1|353846 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20


Match Name	E-value	Identity	Description
A0A835YUX3_9STRA	0.000e+0	87.02	Uncharacterized protein (Fragment) n=2 Tax=Tribone...	[more]
A0A836CI03_9STRA	0.000e+0	79.12	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZB59_9STRA	0.000e+0	86.30	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CJR7_9STRA	0.000e+0	73.94	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZAC7_9STRA	0.000e+0	69.77	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CI45_9STRA	0.000e+0	89.89	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CHY4_9STRA	0.000e+0	79.84	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z3D5_9STRA	3.690e-301	64.50	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z1J2_9STRA	5.610e-163	73.29	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YVB5_9STRA	6.580e-103	60.83	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Pages

BLAST of jgi.p|Trimin1|353846 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CJ81_9STRA	9.380e-248	100.00	Sulfotransferase family-domain-containing protein ...	[more]
A0A836CJZ7_9STRA	4.730e-110	61.40	Sulfotransferase family-domain-containing protein ...	[more]
A0A835YXU8_9STRA	1.140e-84	47.95	Sulfotransferase family-domain-containing protein ...	[more]
A0A835Z0T9_9STRA	1.880e-83	47.35	Sulfotransferase family-domain-containing protein ...	[more]
A0A835Z7D4_9STRA	9.050e-66	44.33	Sulfotransferase family-domain-containing protein ...	[more]
A0A835Z974_9STRA	1.280e-57	44.04	Sulfotransferase family-domain-containing protein ...	[more]
A0A835YPV5_9STRA	1.900e-52	42.59	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z3G3_9STRA	5.380e-49	33.52	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z948_9STRA	3.690e-46	36.36	Sulfotransferase family-domain-containing protein ...	[more]
A0A835YYQ7_9STRA	3.150e-35	39.49	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_187	contig	Contig_187:258972..263343 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353846\|estExt_Genemark1.C_Ctg_1870033
Hectar predicted targeting category	other localisation
TranscriptId	354168
Track	FilteredModels1
ProteinId	353846

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353846	gene_17087	Tribonema minus UTEX_B_3156	gene	Contig_187 258972..263343 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353846	Trimin1\|353846\|estExt_Genemark1.C_Ctg_1870033	Tribonema minus UTEX_B_3156	polypeptide	Contig_187 258972..263342 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17087_1	exon_17087_1	Tribonema minus UTEX_B_3156	exon	Contig_187 258972..258988 +
exon_17087_2	exon_17087_2	Tribonema minus UTEX_B_3156	exon	Contig_187 259218..259265 +
exon_17087_3	exon_17087_3	Tribonema minus UTEX_B_3156	exon	Contig_187 259437..259719 +
exon_17087_4	exon_17087_4	Tribonema minus UTEX_B_3156	exon	Contig_187 259843..259938 +
exon_17087_5	exon_17087_5	Tribonema minus UTEX_B_3156	exon	Contig_187 259991..260356 +
exon_17087_6	exon_17087_6	Tribonema minus UTEX_B_3156	exon	Contig_187 261144..261560 +
exon_17087_7	exon_17087_7	Tribonema minus UTEX_B_3156	exon	Contig_187 261814..262186 +
exon_17087_8	exon_17087_8	Tribonema minus UTEX_B_3156	exon	Contig_187 262555..263343 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17087	CDS_17087	Tribonema minus UTEX_B_3156	CDS	Contig_187 258972..258988 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_17087	UTR3_17087	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_187 263343..263343 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_187:258972..263343+
coding sequence from alignment at Contig_187:258972..263343+

spliced messenger RNA

>mRNA_17087 ID=mRNA_17087|Name=jgi.p|Trimin1|353846|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2389bp|location=Sequence derived from alignment at Contig_187:258972..263343+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGTTAATGCTAGCAAGCGCGCCAGCAAGAAGGGCAGCAAGGGCAA
GCGACAGTACGTCAGGACGCCAACCAGGACTGAGCTGCTCAGCCTGTCTG
ACGTACTGAAGCGCGCGGAGCCAGCGCAGGGCATCATGCCTCTCTGCGAG
GCATGGGGGACATATTTGCTGCAGCGCGCATGCCTGGTGTTTGAGGGTAT
GCTGGTCATGCATGTCTACCTCACGGACGCCAAGGTCAAGAGAGTGTCTG
GGTCGCGCTTTGATGCCAACGAGTGGGTTAGAGATGGCAAGTACCTGCGC
CCCAATCAGCCACACCTTCACTCCAACGGCAAGCGGACGCATGGCATTAC
TGTGGACACACTAGAGCTGGAGACGCTCCCCAGGAAGACCGCCGCCAACG
TCACCCCAGTCAACTCGGTCATCAAGATCCTGTCCACCGCAGCAGGGGAG
CTCGAGTTGGCGGAAACTCGCATCCACGCAACTACGGTCGCCGACGATCG
CAAGCCTTTCGGCGTCCTGGATACACTCGTCCCCCCTTCCCACCCGTCGC
TACCACGTGCCCTCGAAGCACTCGTCTGCAGCAAGCGCGGAGGCGAACGC
CCGCCTGTGTGCGTTGTCAACAGCACCCCGATGGCGAGGATGGAGATGTG
GTTCCTCTCGGCGGACACCAACTCTGGGGAGGCTGCTCGGTCGCAATCGG
CGTATTGCAACTTGATGTACGACGCGCAGTTCTGCCTGCACACCATGAGG
AGCACCTTGCAAAACTCGATCGACTTGAGTGGATGCATTGAGAGCCTACG
GCGGAATCAGGCCCCCTTCCAGTGCTACATCCGCTTACAGCACAGGAAGT
GGCAGGCACTCAGCCAGGCGCACGAGCACAAGGTGAAGCAAGGCCGCATA
CTCCCCGAGCACCTCATGTACCTCATTCATGACATGCTGGAAGGGTTCAT
CAGGAGCACCTGGAAGCCGTTTGAGAGGGCCATTCAACGCGGGCTGGAGA
CGCAGGGCCGTCAGATGCCGGACTTTGACGGTCTCATCGAGCTTCTGGCG
CACCGCCGTCCCGCAGACGGCTTCAACATGGCTCAGCCGGAGGGCGACTG
CGTGCATCTGGAGGTCGACTGGGTCACAACACTCGCACACCACATGCTGG
AGGCGGAGCAGTTCACCACATACGACGTCGCCAACCTCGAGATTCTCGTC
CACCTGTACGCCTACTACCTGCTCCCGGATATTGCGAACGCCGAACTTGG
CAAGATCGCAATGAGCGGTGGTGGTGACGACACGGAGCCAATGAAGACAT
GCGTGCCAGTCCCGTTGGAGCTCAACAGGCCTATGCTGACGATCCTGTTT
CTGTGCCGGGCAATGCGCGCCATCCACTTCGGAACCCCAGTGCCCGACCG
CTTAGTTGGCCTCAGCGGCGGTGCCAACTACCAAGTGAGCCAAACCACGT
TTCGCGAGAAGGTCCTCAACGAGATCGGCCGCAACAATCTGGGCATCCCC
TACTACGCGTCCTACAGCAACAGATCCACTGCCGTGACTGAAATCTTTGC
GAAGACGATGAAGATGCCGTATGGGGAGCAGCAGGACTTCATCGCATCAA
GCATGAAAGAGTTGCACAGCAGTGTCTCAGCCGGGAAGAGCGCCTACAGA
CAGTTTGAGGCTTCGCTGAGCAGCCGCGTGCAGAACCGGGGGAAGCGCTC
CCAGTTTGTCGCAGCAGATGGTGAGGGCCATGGTCTTGTTGATGTGCTGC
GCCCACCCCCTGCACTGCGCCCCATGTCCTTAGCCGGGAGTGACGGTGGT
TCTGGGGGGGGCGTGGCCGGTTGTGGAGGTGGTGCGCAAGCCATTGCTGA
AATGGCTGCCGCCGCAATCGCCAACATGCAGCATGTGCATGCAGCTAGCT
TGCAGGGCGCAATCGCCAACATGCAGAACACACACACGACCACCATGCAG
CAGATGCAGGCGACACACGCACTGTCTTTACAGCAGTTTCAGAAAGTGCA
CAAAACCACCTACCGGCGCACATCACACCTTCACAGCGAAACATTGCAGC
AGATGTCCGCGGTGCACAGCCAAACGTTGCAGCAGAACGCTGCCGCTCAC
CATGCGTACTTGGCTCAACAGCAGCAGCAGGCCCAGCGACAGTGGGCTCA
GCAAGCCATGTTCTGCAACTTCCTGCACATGCAGCAGCGTGGTATGTATC
CGCCGTATGGCCACCCCCCTCAGATGCTGCAATCTGCTCCAATTGGCCAC
AACCCCCCACAGCAGATGCTGCCAGCTGCCCAGCTCCCTTTGCACATGCA
GCACAGCCCTCCAGGATACTATCACTACTCTCAAACTGCCGCACAGAGCC
AGATGTCTGGGCCTCCACAGTCCCCCCCTCCACCTCCCG

protein sequence of jgi.p|Trimin1|353846

>Trimin1|353846|estExt_Genemark1.C_Ctg_1870033 ID=Trimin1|353846|estExt_Genemark1.C_Ctg_1870033|Name=jgi.p|Trimin1|353846|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=796bp
MAVNASKRASKKGSKGKRQYVRTPTRTELLSLSDVLKRAEPAQGIMPLCE
AWGTYLLQRACLVFEGMLVMHVYLTDAKVKRVSGSRFDANEWVRDGKYLR
PNQPHLHSNGKRTHGITVDTLELETLPRKTAANVTPVNSVIKILSTAAGE
LELAETRIHATTVADDRKPFGVLDTLVPPSHPSLPRALEALVCSKRGGER
PPVCVVNSTPMARMEMWFLSADTNSGEAARSQSAYCNLMYDAQFCLHTMR
STLQNSIDLSGCIESLRRNQAPFQCYIRLQHRKWQALSQAHEHKVKQGRI
LPEHLMYLIHDMLEGFIRSTWKPFERAIQRGLETQGRQMPDFDGLIELLA
HRRPADGFNMAQPEGDCVHLEVDWVTTLAHHMLEAEQFTTYDVANLEILV
HLYAYYLLPDIANAELGKIAMSGGGDDTEPMKTCVPVPLELNRPMLTILF
LCRAMRAIHFGTPVPDRLVGLSGGANYQVSQTTFREKVLNEIGRNNLGIP
YYASYSNRSTAVTEIFAKTMKMPYGEQQDFIASSMKELHSSVSAGKSAYR
QFEASLSSRVQNRGKRSQFVAADGEGHGLVDVLRPPPALRPMSLAGSDGG
SGGGVAGCGGGAQAIAEMAAAAIANMQHVHAASLQGAIANMQNTHTTTMQ
QMQATHALSLQQFQKVHKTTYRRTSHLHSETLQQMSAVHSQTLQQNAAAH
HAYLAQQQQQAQRQWAQQAMFCNFLHMQQRGMYPPYGHPPQMLQSAPIGH
NPPQQMLPAAQLPLHMQHSPPGYYHYSQTAAQSQMSGPPQSPPPPP

mRNA from alignment at Contig_187:258972..263343+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17087 ID=mRNA_17087|Name=jgi.p|Trimin1|353846|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4372bp|location=Sequence derived from alignment at Contig_187:258972..263343+ (Tribonema minus UTEX_B_3156 )
ATGGCGGTTAATGCTAGGTAAGAGAGTGCACCATTGGTTCCTGCACACGG
ACTGCATACTGCCATGCATAGGATCACAGCCACTCAAATACAAATGATCA
CTGCACGCAATCGTAGGCTCACTATGCTTTTTTGTTCTTCTCTGTGTGCA
TCTTTGTACGACCAGCAGCGCTGCTGTCGAAGACTCTCATCCTGTGGAGA
CAGCAGACAGACAGCAGGGCTTAAGCGCTGATGCCCCCCCTCGCAGCAAG
CGCGCCAGCAAGAAGGGCAGCAAGGGCAAGCGACAGTACGTCAGGTGATG
CCCGCGTTGTGTTCTAGTGTTCTGTCAACCTGTGTCCCCTGCTGTCAGTC
ATTAAGTGACATCTTTCACCATTGTGCGCCTGAAATCTGCAGGAAGTATG
GCTGTCTCAGCAATCTGGCAGACTCTAACTTCACTTCTTTACATGTTGCG
CTGCTATCCGTGCAGGACGCCAACCAGGACTGAGCTGCTCAGCCTGTCTG
ACGTACTGAAGCGCGCGGAGCCAGCGCAGGGCATCATGCCTCTCTGCGAG
GCATGGGGGACATATTTGCTGCAGCGCGCATGCCTGGTGTTTGAGGGTAT
GCTGGTCATGCATGTCTACCTCACGGACGCCAAGGTCAAGAGAGTGTCTG
GGTCGCGCTTTGATGCCAACGAGTGGGTTAGAGATGGCAAGTACCTGCGC
CCCAATCAGCCACACCTTCACTCCAACGGCAAGCGGACGCATGGCATTGT
ACGCGCCATTGCGGACACAGTCACTTGCGACCGTCTCTTGCCACCAAAAC
AGCATAGGTACACCCACCTAGACACCAGCAGCTCGTACATGGCAATCTGC
TGGCCTGGCCTCACCCAGCAGACTGTGGACACACTAGAGCTGGAGACGCT
CCCCAGGAAGACCGCCGCCAACGTCACCCCAGTCAACTCGGTCATCAAGA
TCCTGTCCACCGCAGCAGTCCTCGGCCGTCGCCCCACCTGCGCTTCAGGT
GCTGTCATGCTGACCCAAGGGGGAGCTCGAGTTGGCGGAAACTCGCATCC
ACGCAACTACGGTCGCCGACGATCGCAAGCCTTTCGGCGTCCTGGATACA
CTCGTCCCCCCTTCCCACCCGTCGCTACCACGTGCCCTCGAAGCACTCGT
CTGCAGCAAGCGCGGAGGCGAACGCCCGCCTGTGTGCGTTGTCAACAGCA
CCCCGATGGCGAGGATGGAGATGTGGTTCCTCTCGGCGGACACCAACTCT
GGGGAGGCTGCTCGGTCGCAATCGGCGTATTGCAACTTGATGTACGACGC
GCAGTTCTGCCTGCACACCATGAGGAGCACCTTGCAAAACTCGATCGACT
TGAGTGGATGCATTGAGAGCCTACGGCGGAATCAGGTGAGTTGCACTTTG
ATTGACATGCTCAGTTACTGAAACTGTGTCACTGGCGATGTTGCTTTTGA
TGGATTTGTGTAGTGGTTCAGTTGACTTTGATGGCAAACCGCCGGCACCG
GCAGCGCCTTGATGTGTACAAACATAGCATAGTCGTATGCTCAAGCTATG
TCTTACGTATGTGTTGCAACTTCAATATTCGCCTGCACTACATGTCAACA
TCCTGCGCTGCACGTCTACAATACCCTGCACTGCACGTCTACACAACCCT
GCACTGCGCGTCTACACTACCCTGCACTGCATACCTACACTGCCCTGCAC
TGCACGTCTATACATTGCTGCACTGCATATCTACACTGCCCTGCACTGCG
CGTCCCCACAACCCTGCACTGCACGTCTACGCAACCCTGCACTGCACGTC
TACACATTCCTGCACTACACATCCCTGCAGTAGGCATCTACACTGCGCGT
CCACACAACCCTGTATTGCACGTCTACACAATGCTGCACTGCACATCTAC
ACATCCCTGCACTGCGCGTGCGTCTACACAATCCTGCACTGCACGTCTAC
ACTGCACATCTACACATCCCTGCAATGCGCGTGAGTCTACACAATCCTGC
ACTGCACGTCTACACTGCACATCTACACAGCCCTAAACTGCACATCTCCA
CCCCCCGTACTGCCACAGTGTCATTGTGTTTGTAATGTGTCCAGCAGGTC
CACTGTAAAACATGCAGCGCTCTCATTTTAATTCGTGGAGGATATATACA
CCTTTCCCTGCTGCTTTGACAGGCCCCCTTCCAGTGCTACATCCGCTTAC
AGCACAGGAAGTGGCAGGCACTCAGCCAGGCGCACGAGCACAAGGTGAAG
CAAGGCCGCATACTCCCCGAGCACCTCATGTACCTCATTCATGACATGCT
GGAAGGGTTCATCAGGAGCACCTGGAAGCCGTTTGAGAGGGCCATTCAAC
GCGGGCTGGAGACGCAGGGCCGTCAGATGCCGGACTTTGACGGTCTCATC
GAGCTTCTGGCGCACCGCCGTCCCGCAGACGGCTTCAACATGGCTCAGCC
GGAGGGCGACTGCGTGCATCTGGAGGTCGACTGGGTCACAACACTCGCAC
ACCACATGCTGGAGGCGGAGCAGTTCACCACATACGACGTCGCCAACCTC
GAGATTCTCGTCCACCTGTACGCCTACTACCTGCTCCCGGTCAGGCCTGA
GGCACTTGTGAGCAATCTTGCCTCTCAGGTCTGGGCCAAGCGGACTATGG
GTCCAGATGGCTGTGTTTCCTTCATCTTATTCCAGGTATGCGCATGACCA
GTAACGTACGCACACTCTGAGCACGTCTTGATATGATGTGTAATGTGTGT
CAACAACAGTGATGCAACACAGCTTACAACACCTTGCTGTGACTTTGCGA
CATCACCAATGCTTACTTGGCTTTGCTGTCTTCTCATGTCAGGATATTGC
GAACGCCGAACTTGGCAAGATCGCAATGAGCGGTGGTGGTGACGACACGG
AGCCAATGAAGACATGCGTGCCAGTCCCGTTGGAGCTCAACAGGCCTATG
CTGACGATCCTGTTTCTGTGCCGGGCAATGCGCGCCATCCACTTCGGAAC
CCCAGTGCCCGACCGCTTAGTTGGCCTCAGCGGCGGTGCCAACTACCAAG
TGAGCCAAACCACGTTTCGCGAGAAGGTCCTCAACGAGATCGGCCGCAAC
AATCTGGGCATCCCCTACTACGCGTCCTACAGCAACAGATCCACTGCCGT
GACTGAAATCTTTGCGAAGACGATGAAGATGCCGTATGGGGAGCAGCAGG
ACTTCATCGCATCAAGTGAGTCAGACAATTTGCATGTCAAGTCAACAGCT
TCAGTTCACTCATGCTAGCTGATGTTGTGCGCGCAAGTCACATCCATGCT
TGGTGCTTGCGACAACCTTACAGTCGGAATCATGCTGGACTGTGACGGTG
GCTAGACCTGATGTTATGTTTGCGTGTGTCGTTTCTTCATCTTACCTGCA
TGGGCACTCAATATGCAGCAAGTACCTTGCAGTGCGACTCATGCTGGACT
GTTAGCATAGCTTGGTCTGATGTTATGTTTGCGTGTGTCGTTCGTTCATC
TCACCTACGACCACTCAATATGCAGCAAATACCTGAGCTAGATTTGATTT
GTACCAACTTGCATGTTTCTGTCGCGCTTACAGGCATGAAAGAGTTGCAC
AGCAGTGTCTCAGCCGGGAAGAGCGCCTACAGACAGTTTGAGGCTTCGCT
GAGCAGCCGCGTGCAGAACCGGGGGAAGCGCTCCCAGTTTGTCGCAGCAG
ATGGTGAGGGCCATGGTCTTGTTGATGTGCTGCGCCCACCCCCTGCACTG
CGCCCCATGTCCTTAGCCGGGAGTGACGGTGGTTCTGGGGGGGGCGTGGC
CGGTTGTGGAGGTGGTGCGCAAGCCATTGCTGAAATGGCTGCCGCCGCAA
TCGCCAACATGCAGCATGTGCATGCAGCTAGCTTGCAGGGCGCAATCGCC
AACATGCAGAACACACACACGACCACCATGCAGCAGATGCAGGCGACACA
CGCACTGTCTTTACAGCAGTTTCAGAAAGTGCACAAAACCACCTACCGGC
GCACATCACACCTTCACAGCGAAACATTGCAGCAGATGTCCGCGGTGCAC
AGCCAAACGTTGCAGCAGAACGCTGCCGCTCACCATGCGTACTTGGCTCA
ACAGCAGCAGCAGGCCCAGCGACAGTGGGCTCAGCAAGCCATGTTCTGCA
ACTTCCTGCACATGCAGCAGCGTGGTATGTATCCGCCGTATGGCCACCCC
CCTCAGATGCTGCAATCTGCTCCAATTGGCCACAACCCCCCACAGCAGAT
GCTGCCAGCTGCCCAGCTCCCTTTGCACATGCAGCACAGCCCTCCAGGAT
ACTATCACTACTCTCAAACTGCCGCACAGAGCCAGATGTCTGGGCCTCCA
CAGTCCCCCCCTCCACCTCCCG

Coding sequence (CDS) from alignment at Contig_187:258972..263343+

>mRNA_17087 ID=mRNA_17087|Name=jgi.p|Trimin1|353846|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2388bp|location=Sequence derived from alignment at Contig_187:258972..263343+ (Tribonema minus UTEX_B_3156 )
ATGGCGGTTAATGCTAGCAAGCGCGCCAGCAAGAAGGGCAGCAAGGGCAA
GCGACAGTACGTCAGGACGCCAACCAGGACTGAGCTGCTCAGCCTGTCTG
ACGTACTGAAGCGCGCGGAGCCAGCGCAGGGCATCATGCCTCTCTGCGAG
GCATGGGGGACATATTTGCTGCAGCGCGCATGCCTGGTGTTTGAGGGTAT
GCTGGTCATGCATGTCTACCTCACGGACGCCAAGGTCAAGAGAGTGTCTG
GGTCGCGCTTTGATGCCAACGAGTGGGTTAGAGATGGCAAGTACCTGCGC
CCCAATCAGCCACACCTTCACTCCAACGGCAAGCGGACGCATGGCATTAC
TGTGGACACACTAGAGCTGGAGACGCTCCCCAGGAAGACCGCCGCCAACG
TCACCCCAGTCAACTCGGTCATCAAGATCCTGTCCACCGCAGCAGGGGAG
CTCGAGTTGGCGGAAACTCGCATCCACGCAACTACGGTCGCCGACGATCG
CAAGCCTTTCGGCGTCCTGGATACACTCGTCCCCCCTTCCCACCCGTCGC
TACCACGTGCCCTCGAAGCACTCGTCTGCAGCAAGCGCGGAGGCGAACGC
CCGCCTGTGTGCGTTGTCAACAGCACCCCGATGGCGAGGATGGAGATGTG
GTTCCTCTCGGCGGACACCAACTCTGGGGAGGCTGCTCGGTCGCAATCGG
CGTATTGCAACTTGATGTACGACGCGCAGTTCTGCCTGCACACCATGAGG
AGCACCTTGCAAAACTCGATCGACTTGAGTGGATGCATTGAGAGCCTACG
GCGGAATCAGGCCCCCTTCCAGTGCTACATCCGCTTACAGCACAGGAAGT
GGCAGGCACTCAGCCAGGCGCACGAGCACAAGGTGAAGCAAGGCCGCATA
CTCCCCGAGCACCTCATGTACCTCATTCATGACATGCTGGAAGGGTTCAT
CAGGAGCACCTGGAAGCCGTTTGAGAGGGCCATTCAACGCGGGCTGGAGA
CGCAGGGCCGTCAGATGCCGGACTTTGACGGTCTCATCGAGCTTCTGGCG
CACCGCCGTCCCGCAGACGGCTTCAACATGGCTCAGCCGGAGGGCGACTG
CGTGCATCTGGAGGTCGACTGGGTCACAACACTCGCACACCACATGCTGG
AGGCGGAGCAGTTCACCACATACGACGTCGCCAACCTCGAGATTCTCGTC
CACCTGTACGCCTACTACCTGCTCCCGGATATTGCGAACGCCGAACTTGG
CAAGATCGCAATGAGCGGTGGTGGTGACGACACGGAGCCAATGAAGACAT
GCGTGCCAGTCCCGTTGGAGCTCAACAGGCCTATGCTGACGATCCTGTTT
CTGTGCCGGGCAATGCGCGCCATCCACTTCGGAACCCCAGTGCCCGACCG
CTTAGTTGGCCTCAGCGGCGGTGCCAACTACCAAGTGAGCCAAACCACGT
TTCGCGAGAAGGTCCTCAACGAGATCGGCCGCAACAATCTGGGCATCCCC
TACTACGCGTCCTACAGCAACAGATCCACTGCCGTGACTGAAATCTTTGC
GAAGACGATGAAGATGCCGTATGGGGAGCAGCAGGACTTCATCGCATCAA
GCATGAAAGAGTTGCACAGCAGTGTCTCAGCCGGGAAGAGCGCCTACAGA
CAGTTTGAGGCTTCGCTGAGCAGCCGCGTGCAGAACCGGGGGAAGCGCTC
CCAGTTTGTCGCAGCAGATGGTGAGGGCCATGGTCTTGTTGATGTGCTGC
GCCCACCCCCTGCACTGCGCCCCATGTCCTTAGCCGGGAGTGACGGTGGT
TCTGGGGGGGGCGTGGCCGGTTGTGGAGGTGGTGCGCAAGCCATTGCTGA
AATGGCTGCCGCCGCAATCGCCAACATGCAGCATGTGCATGCAGCTAGCT
TGCAGGGCGCAATCGCCAACATGCAGAACACACACACGACCACCATGCAG
CAGATGCAGGCGACACACGCACTGTCTTTACAGCAGTTTCAGAAAGTGCA
CAAAACCACCTACCGGCGCACATCACACCTTCACAGCGAAACATTGCAGC
AGATGTCCGCGGTGCACAGCCAAACGTTGCAGCAGAACGCTGCCGCTCAC
CATGCGTACTTGGCTCAACAGCAGCAGCAGGCCCAGCGACAGTGGGCTCA
GCAAGCCATGTTCTGCAACTTCCTGCACATGCAGCAGCGTGGTATGTATC
CGCCGTATGGCCACCCCCCTCAGATGCTGCAATCTGCTCCAATTGGCCAC
AACCCCCCACAGCAGATGCTGCCAGCTGCCCAGCTCCCTTTGCACATGCA
GCACAGCCCTCCAGGATACTATCACTACTCTCAAACTGCCGCACAGAGCC
AGATGTCTGGGCCTCCACAGTCCCCCCCTCCACCTCCC