mRNA_16701 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353777 vs. uniprot
Match: A0A835Z901_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z901_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.130e-19 Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 1
Query: 220 MAHAAAQPAEVATQXXXXXXXXXXXXXXXPAPAALEGVDGALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLISPVVDKVVVGPVSYLAAKRKLRKMMGK 552
MAHAAAQPAEVATQXXXXXXXXXXXXXXXPAPAALEGVDGAL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLISPVVDKVVVGPVSYLAAKRKLRKMMGK
Sbjct: 1 MAHAAAQPAEVATQXXXXXXXXXXXXXXXPAPAALEGVDGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLISPVVDKVVVGPVSYLAAKRKLRKMMGK 111
BLAST of jgi.p|Trimin1|353777 vs. uniprot
Match: A0A835ZDD6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDD6_9STRA) HSP 1 Score: 1409 bits (3648), Expect = 0.000e+0 Identity = 824/824 (100.00%), Postives = 824/824 (100.00%), Query Frame = 1
Query: 100 MAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMATRGPSSDPSVPQGQHNDPYGALALSSACDNPYYGSLSSGRGGEMVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQEKFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXXEGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGSGSRRGAPSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGSDNFNSDIDADYSDHSTTARRQAQQHLAQLRAVKRTARSVTQDRDAALRQPSA 2571
MAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMATRGPSSDPSVPQGQHNDPYGALALSSACDNPYYGSLSSGRGGEMVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQEKFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXXEGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGSGSRRGAPSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGSDNFNSDIDADYSDHSTTARRQAQQHLAQLRAVKRTARSVTQDRDAALRQPSA
Sbjct: 1 MAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMATRGPSSDPSVPQGQHNDPYGALALSSACDNPYYGSLSSGRGGEMVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQEKFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXLAKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXXEGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGSGSRRGAPSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGSDNFNSDIDADYSDHSTTARRQAQQHLAQLRAVKRTARSVTQDRDAALRQPSA 824
BLAST of jgi.p|Trimin1|353777 vs. uniprot
Match: A0A835Z3V8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V8_9STRA) HSP 1 Score: 1154 bits (2984), Expect = 0.000e+0 Identity = 691/847 (81.58%), Postives = 717/847 (84.65%), Query Frame = 1
Query: 100 MAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMATRGPSSDPSVPQGQHNDPYGALALSSACDNPYYGSLSSGRGGEMVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQEKFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXL----------------------AKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXX-----------------------------------EGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGS-GSRRGAPSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGAL--WFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGSDNFNSDIDADYSDHS 2460
MAQQDD+SST SCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMA RGPSSDPSVPQGQ+NDPYGALALSSACDN Y GS+SSGRGGEMVDLAQQVKSLLQPDIHE IRRS NLTAAAVGNLQEKFADYA+HVAEVQEGAYQQRRE QRRDTELSDALTSDLQALQTRLEEAERRAF XXXXXXXXXXXXXXXXXXXX AKVNSL D+AAASPQQRRQLPYTPGSV+HSAAQQ+LSAPRAE NEFNLRTFGG AARRDD+ERSRISMHSTRSLLRPTP EGDKGSLKDEA AQLDGAVRVARSQ+LWTLTQ QARMDATQQLAAERA+HDTK+AATEAALQREREILRMER+EVERSARANELLLRQTQLEGLAQ RQLAA RTAMHAEQRAFEHVKS+ FS ASR GDGSES+RS+APSR XXXXXXXXXXXXXXXXXXXXX G+ A +PAPAAV PGQPA LP EAWFD+QGRAITRMAI+LRADDLP TCITGSSLAPLVNLRRMLPSLITEKANHK QKPR+GPMWPALISSDDFGAL WF+TTVFAVV RVVNDGG NYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELA DLVRWVVATGFPLKHFV E TAAAEVISADSRHDNF+LSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLR+QADL IYTAAAREDDRD+YPPDL A+AHWSAPHT DSDSAYDSD RSH SD+FNSDIDADYSDHS
Sbjct: 1 MAQQDDSSSTDSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMAARGPSSDPSVPQGQYNDPYGALALSSACDNLYCGSVSSGRGGEMVDLAQQVKSLLQPDIHEVIRRSLNLTAAAVGNLQEKFADYANHVAEVQEGAYQQRREPQRRDTELSDALTSDLQALQTRLEEAERRAFEWADRAXXXXXXXXXXXXXXXXXXXXXLAEDARSAENLRTVMVYINRLEAKVNSLLDNAAASPQQRRQLPYTPGSVHHSAAQQVLSAPRAELNEFNLRTFGGSAARRDDNERSRISMHSTRSLLRPTPAMLPPRPGSVNYPPTSSATATVRDASARPPVPPFSFSLALPLAKAPAREGDKGSLKDEALAQLDGAVRVARSQKLWTLTQAQARMDATQQLAAERAKHDTKIAATEAALQREREILRMEREEVERSARANELLLRQTQLEGLAQERQLAANRTAMHAEQRAFEHVKSELAFSAASRGGDGSESVRSNAPSRRRDRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPAAASAPAPAAVLPGQPACLPMEAWFDSQGRAITRMAIRLRADDLPRTCITGSSLAPLVNLRRMLPSLITEKANHKCQKPRNGPMWPALISSDDFGALSDWFSTTVFAVVNRVVNDGGGNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELATDLVRWVVATGFPLKHFVHEVSTAAAEVISADSRHDNFMLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRKQADLVIYTAAAREDDRDMYPPDLNAHAHWSAPHTADSDSAYDSDGGRSHSSDDFNSDIDADYSDHS 847
BLAST of jgi.p|Trimin1|353777 vs. uniprot
Match: A0A835Z987_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z987_9STRA) HSP 1 Score: 1050 bits (2716), Expect = 0.000e+0 Identity = 654/860 (76.05%), Postives = 668/860 (77.67%), Query Frame = 1
Query: 19 IADSAAAAPPAAAPSRLAEPSAAVSPAMAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMATRGPSSDPSVPQGQHNDPYGALALSSACDNPYY--GSLSSGRGGEMVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQE---KFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXL----------------------AKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXX-----------------------------------EGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGSGSRR----GAPS--PAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSD 2394
I DSA APPAAAPSRLAEPSAAVSPAMAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMA RGPSSDPSVPQGQHNDP GALALSSAC NPY+ GS+SSGRGGEMVDLAQQVKSLLQPDIHEAI RS N TAAAVG LQE KFA+YA HVA+VQE AYQQRRE DLQALQTRL+EAERRAF XXXXXXXXXX AKV+SL DAAA QQ RQLPYTPGS YHSA QQMLSAPRAE NEFNLRTFGG AARRDDDERSRISMHSTRSLLRPTP EGDKGSLKDEARAQLDGAVRVA SQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMER+EVERSARANELLLRQTQLEGLAQ RQLAA RTAMHAEQRAF+H KSQ FS ASR GDGSES+ SSAPSR XXXXXXXXXXXXXXXXXXXXXXXX GAP+ PAPAAVWPGQPAGLPTEAWFDAQGRAITRMAI+LRADDLP TCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDG MWPALISSDDFGALWF+TTVFAVV RVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPL+HFV EF TAAAEVIS DSR DNFVLSALLEVCRQQYSATAAAWT+IADDPQSHTTRDLLE AYAHWSAPHT D DS YDSD
Sbjct: 3 IEDSAVEAPPAAAPSRLAEPSAAVSPAMAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMAARGPSSDPSVPQGQHNDPCGALALSSACGNPYHRDGSVSSGRGGEMVDLAQQVKSLLQPDIHEAIHRSLNPTAAAVGGLQESSEKFANYAAHVADVQESAYQQRREXXXXXXXXXXXXXXDLQALQTRLKEAERRAFEWADRATVADKRVAAAXXXXXXXXXXXXAEEARSANNFRTVMVYFNRLEAKVSSLLMDAAAVSQQHRQLPYTPGSAYHSA-QQMLSAPRAELNEFNLRTFGGSAARRDDDERSRISMHSTRSLLRPTPAMLPPHPGSVNYPTTSSATATVRDASARPPVPTFSFSLALPLAKAPAREGDKGSLKDEARAQLDGAVRVAHSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMEREEVERSARANELLLRQTQLEGLAQERQLAANRTAMHAEQRAFDHAKSQLAFSAASRGGDGSESVHSSAPSRRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAPAAAPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIRLRADDLPRTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGTMWPALISSDDFGALWFSTTVFAVVNRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLQHFVHEFSTAAAEVISTDSRQDNFVLSALLEVCRQQYSATAAAWTYIADDPQSHTTRDLLE----------------------------AYAHWSAPHTADGDSVYDSD 833
BLAST of jgi.p|Trimin1|353777 vs. uniprot
Match: A0A836C9L9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L9_9STRA) HSP 1 Score: 845 bits (2183), Expect = 1.040e-292 Identity = 509/716 (71.09%), Postives = 520/716 (72.63%), Query Frame = 1
Query: 373 MVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQEKFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXL----------------------AKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXX-------------------EGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGSGSRRGAPSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDS 2397
MVDLAQQVKSLLQ DI E IRRS NLTAAAV +LQ KF DY HVA++Q GAYQQRREQQRRDT+LSDAL SDLQALQTRLEEAERRAF XXXXXXXXXXXXX L AKVN L DDAAAS QQRRQL YTPGS YHSA QQMLSAPRAE +EFNLRTFGG AARRDDDERSRISMHSTRSLLRPTP EGDKGSLKDEARAQLDGAVR ARSQQLWTLTQTQAR D TQQLAAERAEHDTKVAATEAALQREREILRMER+EVERSARANELLLRQTQLEGLAQ RQ+AA RT MHAEQRAFEH GR ITRMAI+LRADDLP TCITGSSLAPLVNLRR+LPSLI EKANHKRQKPRDGPMWPALISSDDFGALWF+ TVF VV RVVNDGGDNYLVSSLSAQAAEWVSEGE LVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFV EF AAA VISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLR+QADLAIYTAAAREDDRDIYPPDLKAYAHWSAP T DSDS YDSDS
Sbjct: 1 MVDLAQQVKSLLQADIPEPIRRSLNLTAAAVEDLQGKFVDYTVHVADMQAGAYQQRREQQRRDTDLSDALISDLQALQTRLEEAERRAFVWADRAMAADXXXXXXXXXXXXXESLLVAEEARSADNLRTVMVYVNRLEAKVNGLLDDAAASSQQRRQLSYTPGSAYHSA-QQMLSAPRAELHEFNLRTFGGSAARRDDDERSRISMHSTRSLLRPTPPMLPPRPGSVNYPPTXXXXXXXXXXXPRAPAREGDKGSLKDEARAQLDGAVREARSQQLWTLTQTQARTDPTQQLAAERAEHDTKVAATEAALQREREILRMEREEVERSARANELLLRQTQLEGLAQERQMAANRTGMHAEQRAFEH------------------------------------------------------------------------------------------GRTITRMAIRLRADDLPRTCITGSSLAPLVNLRRLLPSLIIEKANHKRQKPRDGPMWPALISSDDFGALWFSITVFTVVNRVVNDGGDNYLVSSLSAQAAEWVSEGECLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVHEFSAAAAGVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRKQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPRTADSDSVYDSDS 625
BLAST of jgi.p|Trimin1|353777 vs. uniprot
Match: A0A835Z0H2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0H2_9STRA) HSP 1 Score: 668 bits (1723), Expect = 3.490e-225 Identity = 430/834 (51.56%), Postives = 476/834 (57.07%), Query Frame = 1
Query: 91 SPAMAQQDDNSSTGSCKGSPASAPEPFFDGTSEAQGCETPSSSAQGRPGMATRGPSSDPSVPQGQHNDPYGALALSSACDNPYYGSLSSGRGGEMVDLAQQVKSLLQPDIHEAIRRSRNLTAAAVGNLQEKFADYAHHVAEVQEGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFXXXXXXXXXXXXXXXXXXXXXXXXXXL-----------------------------------------------AKVNSLPDDAAASPQQRRQLPYTPGSVYHSAAQQMLSAPRAEFNEFNLRTFGGGAARRDDDERSRISMHSTRSLLRPTPXXXXXXXXXXXXX------------------------------------EGDKGSLKDEARAQLDGAVRVARSQQLWTLTQTQARMDATQQLAAERAEHDTKVAATEAALQREREILRMERKEVERSARANELLLRQTQLEGLAQVRQLAAKRTAMHAEQRAFEHVKSQPPFSTASRDGDGSESIRSSAPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXERSGSGSRRGAPSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYA 2343
SPAMAQQDDNSS GSCKGS ASAPEP FDGT EAQGCETPSSSAQGRP MA RGPSSDP VPQGQ NDP G L EMVDLAQQVKSLLQ DI E IRRS NLTAAA+ +LQ KF DYA H A++Q GAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAF L AKVNSL DDAAASPQQRRQL YTPGS YHSA QQMLSAPRAE NE NLRTFGG A RRDDDERSRISMHS+RSLLRPTP EGDKGSLKD+ARAQLDGAV AR QQLWTLTQTQAR D TQQLAAERAEHDTKVAATEAALQ E+E+LR+ER+EVERSARANELLLRQTQLE LAQ R+LAAKR AMHAEQRAFEH + P S GR+ T + PMWPALI +DFG+ WF++ V AV+ +++ GGDNYLVSSL+ +AAEW + E L +SDT +LEW F RI++FLEL+RPAELAADLV WVV GFPLK FV E+ A+ V+SAD + D FVLSALLEVCRQQY+ A +W HI + P HTTR+LLE+LRRQA+ A Y A +RED+R +YP DL++Y+
Sbjct: 151 SPAMAQQDDNSSAGSCKGSTASAPEPLFDGTPEAQGCETPSSSAQGRPSMAARGPSSDPPVPQGQQNDPGGDL--------------------EMVDLAQQVKSLLQADIPEPIRRSFNLTAAAIEDLQGKFVDYAAHAADMQAGAYQQRREQQRRDTELSDALTSDLQALQTRLEEAERRAFEWADRAMAADECVAAADTHAAVLESRLVAEEARNAERXXXXXXXXXXXXXXXXXXXXXXXDNFRTVMVYVNRLEAKVNSLLDDAAASPQQRRQLSYTPGSAYHSA-QQMLSAPRAELNELNLRTFGGSAVRRDDDERSRISMHSSRSLLRPTPAIQLPPHPGSVNDPPISSATATVRDISARSPVAPFSFSLALPPAKAPAHEGDKGSLKDDARAQLDGAV--ARGQQLWTLTQTQARTDPTQQLAAERAEHDTKVAATEAALQCEQELLRVEREEVERSARANELLLRQTQLEALAQERELAAKRAAMHAEQRAFEHARCCPASS----------------------------------------------------------------------------------GRSRTT---------------------------------------------KQRPMWPALIKDEDFGSKWFSSVVRAVINCIISGGGDNYLVSSLTGEAAEWQKDREALTVSDTEQLEWFFTRIAKFLELRRPAELAADLVMWVVKPGFPLKDFVYEYSAASTAVLSADPKQDLFVLSALLEVCRQQYAIIAPSWAHIDEHPHKHTTRNLLEILRRQAERAKYQATSREDNRAVYPSDLRSYS 834
BLAST of jgi.p|Trimin1|353777 vs. uniprot
Match: A0A836CL34_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL34_9STRA) HSP 1 Score: 520 bits (1338), Expect = 7.330e-167 Identity = 267/297 (89.90%), Postives = 274/297 (92.26%), Query Frame = 1
Query: 1534 GAPSPA--PAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGG-DNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGS 2415
GAP+ A PAAVWPGQPAGL TEAWFDAQG AITRMAI+LRADDLP TCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWF+TTVFAVV RVVNDGG D YLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFV + TAA EVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDP SHTTRDLL+VLRRQADLAIY AAAREDDRDIYP D+KAYAHWSAP T DSDS Y SD +HGS
Sbjct: 360 GAPAAALAPAAVWPGQPAGLLTEAWFDAQGHAITRMAIRLRADDLPRTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFSTTVFAVVDRVVNDGGGDTYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVHKVNTAAVEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPHSHTTRDLLKVLRRQADLAIYIAAAREDDRDIYPTDIKAYAHWSAPRTADSDSVYGSDGGCNHGS 656
BLAST of jgi.p|Trimin1|353777 vs. uniprot
Match: A0A836CNV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV7_9STRA) HSP 1 Score: 446 bits (1148), Expect = 3.920e-140 Identity = 238/294 (80.95%), Postives = 245/294 (83.33%), Query Frame = 1
Query: 1549 APAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGSDNFNS 2430
APAAVWPG PAGLPTEAWFDAQGRAITRMAI+LRA+DLP TCITGSSLAPL NLRRMLPSLITEKANHKRQKPRDGPMWP LISSDDFGA WF+TTVFAVV RVVN GG NYLVSSLSAQAAE VSE ERLVLSDTARLEWLFARISQFLEL RPAELAADLVRWVVATGFPLKHFV EF TAAAEVISADSRHDNFVLSALLE LR+QADLAIYTAAAREDDRD+YPPDLKAYAHWSAP T DSDS Y+SDS SHGSD+FNS
Sbjct: 269 APAAVWPGYPAGLPTEAWFDAQGRAITRMAIRLRANDLPRTCITGSSLAPLNNLRRMLPSLITEKANHKRQKPRDGPMWPVLISSDDFGAAWFSTTVFAVVNRVVNGGG-NYLVSSLSAQAAECVSESERLVLSDTARLEWLFARISQFLELNRPAELAADLVRWVVATGFPLKHFVHEFSTAAAEVISADSRHDNFVLSALLEA------------------------------LRKQADLAIYTAAAREDDRDMYPPDLKAYAHWSAPRTADSDSVYNSDSGCSHGSDDFNS 531
BLAST of jgi.p|Trimin1|353777 vs. uniprot
Match: A0A835YVM6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM6_9STRA) HSP 1 Score: 412 bits (1058), Expect = 6.030e-133 Identity = 218/292 (74.66%), Postives = 232/292 (79.45%), Query Frame = 1
Query: 1585 LPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAE-LAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSDSAYDSDSSRSHGSDNFNSDIDADYSDH 2457
+PT A+GRAITRMAI+LRAD+LP TCIT S LAPLVNL RMLPSL TEKANHKRQKPRDG MWPALISSDDFGALWF+TTVFAVV RVVNDGGDNYL FLELKRP+E L ADLVRWVVATGFPLKHFV EF TAAA+VISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTR LLEVLRR+ADLAIYTAAAREDDRDIYP DLKAYAHWSAP T DSD+ Y+SD R+HG+ + NSDIDADYSD+
Sbjct: 120 VPTGEELAAKGRAITRMAIRLRADELPRTCITDSPLAPLVNLERMLPSLTTEKANHKRQKPRDGTMWPALISSDDFGALWFSTTVFAVVKRVVNDGGDNYL-----------------------------------FLELKRPSEKLVADLVRWVVATGFPLKHFVHEFSTAAAKVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRGLLEVLRRRADLAIYTAAAREDDRDIYPTDLKAYAHWSAPRTADSDNVYNSDGGRNHGNHDLNSDIDADYSDY 376
BLAST of jgi.p|Trimin1|353777 vs. uniprot
Match: A0A835ZGI4_9STRA (CCHC-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGI4_9STRA) HSP 1 Score: 251 bits (640), Expect = 1.370e-70 Identity = 123/269 (45.72%), Postives = 183/269 (68.03%), Query Frame = 1
Query: 1537 APSPAPAAVWPGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVNDGGDNYLVSSLSAQAAEWVSEGERLVL-SDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAY 2340
AP+ A A PG+ LP + WFD +G A+T++ + ++ +P + G S+APLV ++++LP LI EKAN +RQ+ R PMWP L +S D+G+ WF T+ AV+ R+ GGDN+ +L Q W+ +G+ + +D L+W+F R+++ LEL+RP ELAADLVRWVV G L+ FV EF A++ V+SAD HDNFVL ALLEVCR QY +T +AW I+ +P++HTT +LL++LR +A+ A++ A AR+D +YP +L++Y
Sbjct: 73 APAEADADELPGRQPSLPRDGWFDTRGIALTKVQVDIQMSHIPQITLDGLSMAPLVTIQQILPDLIREKANAQRQRQR--PMWPTLRNSADYGSNWFAPTLRAVIERLATSGGDNHRTKTLRGQLPGWLRQGKEMAAEADPVLLDWIFERLAKHLELRRPGELAADLVRWVVKPGLALRDFVYEFAQASSAVLSADPHHDNFVLLALLEVCRHQYPSTNSAWRAISLNPRAHTTDELLDILRGEAEHAVHDAIARKDGLAVYPANLRSY 339
BLAST of jgi.p|Trimin1|353777 vs. uniprot
Match: A0A835YUI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUI7_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.460e-42 Identity = 109/272 (40.07%), Postives = 142/272 (52.21%), Query Frame = 1
Query: 1567 PGQPAGLPTEAWFDAQGRAITRMAIKLRADDLPHTCITGSSLAPLVNLRRMLPSLITEKANHKRQKPRDGPMWPALISSDDFGALWFNTTVFAVVIRVVND--GGDNYLVSSLSAQAAEWVSEGERLVLSDTARLEWLFARISQFLELKRPAELAADLVRWVVATGFPLKHFVREFRTAAAEVISADSRHDNFVLSALLEVCRQQYSATAAAWTHIADDPQSHTTRDLLEVLRRQADLAIYTAAAREDDRDIYPPDLKAYAHWSAPHTTDSD 2376
PG+P LP AWFD +G A+TR+ ++ + LP T + G+SL PLVNL++MLPSLI K KR R MWP L +++DF A W TV R V GGD EG SD RL+W F R+++FLEL+RP+ELAA+LV W + G PL+ V F AA ++SAD+R D L ALLE+ RQQY +T+A W I D+P ++TT L YAH SAP D+D
Sbjct: 387 PGRPEALPAMAWFDERGNALTRIPVEYKPGVLPKTVVDGTSLTPLVNLQKMLPSLIRTKTAVKRLMMRPQGMWPTLPAAEDFDAEWVEQTVRRG--RGVGHACGGDTV--------------EGREA--SDQERLDWFFTRLAKFLELRRPSELAAELVSWCMRAGTPLRELVYAFNVAATNMLSADARQDQLCLFALLEILRQQYGSTSALWAAIDDEPSNYTTH------------------------------LATYAHSSAPRAVDAD 610 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353777 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
BLAST of jgi.p|Trimin1|353777 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16701 ID=mRNA_16701|Name=jgi.p|Trimin1|353777|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=555bp|location=Sequence derived from alignment at Contig_183:202329..204757+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CTGAAAGCATTGGAAGACGCGACCGGCGGCAAGCAGCCCGACGTGAGAAGback to top protein sequence of jgi.p|Trimin1|353777 >Trimin1|353777|estExt_Genemark1.C_Ctg_1830021 ID=Trimin1|353777|estExt_Genemark1.C_Ctg_1830021|Name=jgi.p|Trimin1|353777|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=112bp MAHAAAQPAEVATQQEQQQQQQPKGAKQQPAPAALEGVDGALAAAAAAAAback to top mRNA from alignment at Contig_183:202329..204757+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16701 ID=mRNA_16701|Name=jgi.p|Trimin1|353777|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2429bp|location=Sequence derived from alignment at Contig_183:202329..204757+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_183:202329..204757+ >mRNA_16701 ID=mRNA_16701|Name=jgi.p|Trimin1|353777|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=336bp|location=Sequence derived from alignment at Contig_183:202329..204757+ (Tribonema minus UTEX_B_3156 )back to top |