mRNA_17786 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353736
Unique Name	mRNA_17786
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353736 vs. uniprot
Match: A0A835Z4R8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4R8_9STRA)

HSP 1 Score: 682 bits (1760), Expect = 6.360e-245
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 1

Query:    1 MGDSEDMAERGSPLRARNSGKAQGFWSRKLLKRRRSAEVRSVLKEGTEQGAYTTRARLALGAAASLWCLAFVTRSWWPLRVALVALLLEPLLIASALLWWTGQPARSLASDGMAAACSFAAGFWWAAPAAAVASGAMQILLLPALAGVIAVWPLSMPAFDCATAQGCLVPLEGSLMXXXXXXXXXXXDTAAANPAVSGLALAAIAFLGVAAAEQWALSRCCAAGARRDGAQPAAPLRHAVAAAAGMATAKGLVRVMALHPLLLLDGAQDRMSPPFVPTLAPLLVTCAVLQLVDSAXXXXXXXXXXXXXXXXXXXXXXAWRALRWPVALHGAYALLGTVGATCAWPVAATAIARAALVGGAAAAAWRRLLSSPLYDALLDGGGGGSXXXXXXXXXXXDGCEAGAWVELAEMGGDL 1242
            MGDSEDMAERGSPLRARNSGKAQGFWSRKLLKRRRSAEVRSVLKEGTEQGAYTTRARLALGAAASLWCLAFVTRSWWPLRVALVALLLEPLLIASALLWWTGQPARSLASDGMAAACSFAAGFWWAAPAAAVASGAMQILLLPALAGVIAVWPLSMPAFDCATAQGCLVPLEGSLMXXXXXXXXXXXDTAAANPAVSGLALAAIAFLGVAAAEQWALSRCCAAGARRDGAQPAAPLRHAVAAAAGMATAKGLVRVMALHPLLLLDGAQDRMSPPFVPTLAPLLVTCAVLQLVDSAXXXXXXXXXXXXXXXXXXXXXXAWRALRWPVALHGAYALLGTVGATCAWPVAATAIARAALVGGAAAAAWRRLLSSPLYDALLDGGGGGSXXXXXXXXXXXDGCEAGAWVELAEMGGDL
Sbjct:    1 MGDSEDMAERGSPLRARNSGKAQGFWSRKLLKRRRSAEVRSVLKEGTEQGAYTTRARLALGAAASLWCLAFVTRSWWPLRVALVALLLEPLLIASALLWWTGQPARSLASDGMAAACSFAAGFWWAAPAAAVASGAMQILLLPALAGVIAVWPLSMPAFDCATAQGCLVPLEGSLMXXXXXXXXXXXDTAAANPAVSGLALAAIAFLGVAAAEQWALSRCCAAGARRDGAQPAAPLRHAVAAAAGMATAKGLVRVMALHPLLLLDGAQDRMSPPFVPTLAPLLVTCAVLQLVDSAXXXXXXXXXXXXXXXXXXXXXXAWRALRWPVALHGAYALLGTVGATCAWPVAATAIARAALVGGAAAAAWRRLLSSPLYDALLDGGGGGSXXXXXXXXXXXDGCEAGAWVELAEMGGDL 414

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353736 vs. uniprot

BLAST of jgi.p|Trimin1|353736 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z4R8_9STRA	6.360e-245	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_180	contig	Contig_180:248910..256457 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353736\|estExt_Genemark1.C_Ctg_1800021
Hectar predicted targeting category	signal anchor
TranscriptId	354058
Track	FilteredModels1
ProteinId	353736

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353736	gene_17786	Tribonema minus UTEX_B_3156	gene	Contig_180 248910..256457 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353736	Trimin1\|353736\|estExt_Genemark1.C_Ctg_1800021	Tribonema minus UTEX_B_3156	polypeptide	Contig_180 248910..256358 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17786_1	exon_17786_1	Tribonema minus UTEX_B_3156	exon	Contig_180 248910..249024 +
exon_17786_2	exon_17786_2	Tribonema minus UTEX_B_3156	exon	Contig_180 250170..250321 +
exon_17786_3	exon_17786_3	Tribonema minus UTEX_B_3156	exon	Contig_180 251358..251504 +
exon_17786_4	exon_17786_4	Tribonema minus UTEX_B_3156	exon	Contig_180 252411..252524 +
exon_17786_5	exon_17786_5	Tribonema minus UTEX_B_3156	exon	Contig_180 252824..252856 +
exon_17786_6	exon_17786_6	Tribonema minus UTEX_B_3156	exon	Contig_180 253354..253469 +
exon_17786_7	exon_17786_7	Tribonema minus UTEX_B_3156	exon	Contig_180 254511..254642 +
exon_17786_8	exon_17786_8	Tribonema minus UTEX_B_3156	exon	Contig_180 255418..255531 +
exon_17786_9	exon_17786_9	Tribonema minus UTEX_B_3156	exon	Contig_180 256037..256457 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17786	CDS_17786	Tribonema minus UTEX_B_3156	CDS	Contig_180 248910..249024 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_17786	UTR3_17786	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_180 256359..256457 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_180:248910..256457+
coding sequence from alignment at Contig_180:248910..256457+

spliced messenger RNA

>mRNA_17786 ID=mRNA_17786|Name=jgi.p|Trimin1|353736|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1344bp|location=Sequence derived from alignment at Contig_180:248910..256457+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTGATAGCGAGGACATGGCGGAGCGTGGAAGCCCACTGCGGGCACG
CAATAGCGGGAAAGCTCAAGGGTTTTGGAGCAGGAAGCTGCTTAAGCGGC
GGCGCAGCGCAGAAGTTCGCAGCGTACTGAAAGAGGGCACGGAGCAGGGA
GCATACACGACGCGCGCGCGCCTGGCGCTGGGCGCAGCGGCATCATTGTG
GTGCCTGGCATTCGTGACGCGGTCATGGTGGCCGCTGCGCGTGGCGCTGG
TGGCGCTGCTGCTCGAGCCGCTGCTGATAGCCTCGGCGCTGCTGTGGTGG
ACGGGGCAGCCGGCGCGCAGCCTGGCGAGCGACGGCATGGCAGCGGCGTG
CTCCTTCGCGGCGGGCTTCTGGTGGGCGGCGCCCGCTGCGGCTGTGGCAA
GCGGCGCGATGCAGATCCTGCTGCTGCCGGCGCTGGCGGGGGTGATTGCC
GTGTGGCCGCTGAGCATGCCCGCTTTCGACTGCGCGACGGCGCAGGGCTG
CCTGGTGCCGCTCGAGGGGTCCCTCATGGGCTGCCTGGTGCCTCTCGAGG
GGTCCCTCATGGACACGGCCGCGGCGAACCCCGCCGTCTCCGGGCTGGCG
CTGGCCGCGATCGCGTTCCTCGGCGTCGCCGCCGCGGAGCAGTGGGCGCT
GTCGCGCTGCTGCGCGGCGGGCGCGCGGCGCGATGGCGCGCAGCCCGCGG
CGCCGCTGCGGCACGCCGTCGCCGCGGCAGCGGGCATGGCGACGGCCAAG
GGCCTCGTGCGCGTCATGGCGCTGCACCCGCTGCTGCTGCTGGACGGCGC
GCAGGACAGGATGTCGCCACCCTTCGTGCCGACGCTCGCGCCGCTGCTGG
TGACTTGCGCCGTGCTGCAGCTGGTGGACAGCGCGGCGGCAGCGGCAGCA
GCGCCGCAGCAGCAGCGCAGCAACAGCGACAGCAGCTGCGGCGGCGGCGG
CGCGTGGCGCGCGCTGAGGTGGCCCGTCGCGCTGCACGGCGCGTATGCGC
TGCTGGGCACCGTCGGCGCCACGTGCGCGTGGCCAGTGGCCGCCACGGCG
ATAGCGCGCGCCGCACTCGTCGGCGGCGCCGCTGCGGCGGCGTGGCGGCG
GCTGCTATCGAGCCCGCTGTACGACGCGCTGCTGGACGGCGGCGGCGGCG
GCAGCGGCGGCGGCAGCGGCAGCGGCAGTGCATCAGGCGACGGCTGCGAG
GCCGGCGCGTGGGTTGAGCTTGCTGAAATGGGAGGCGATCTGTAGGGCGC
ACGCGGTGCGGCGTGCACTGGACACACGTCGGGCAGCGACATGGCAGCCC
ATAGCAGCGCAGCGGGAGCGCGGAGTTGTCACACACGAACGCCC

protein sequence of jgi.p|Trimin1|353736

>Trimin1|353736|estExt_Genemark1.C_Ctg_1800021 ID=Trimin1|353736|estExt_Genemark1.C_Ctg_1800021|Name=jgi.p|Trimin1|353736|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=415bp
MGDSEDMAERGSPLRARNSGKAQGFWSRKLLKRRRSAEVRSVLKEGTEQG
AYTTRARLALGAAASLWCLAFVTRSWWPLRVALVALLLEPLLIASALLWW
TGQPARSLASDGMAAACSFAAGFWWAAPAAAVASGAMQILLLPALAGVIA
VWPLSMPAFDCATAQGCLVPLEGSLMGCLVPLEGSLMDTAAANPAVSGLA
LAAIAFLGVAAAEQWALSRCCAAGARRDGAQPAAPLRHAVAAAAGMATAK
GLVRVMALHPLLLLDGAQDRMSPPFVPTLAPLLVTCAVLQLVDSAAAAAA
APQQQRSNSDSSCGGGGAWRALRWPVALHGAYALLGTVGATCAWPVAATA
IARAALVGGAAAAAWRRLLSSPLYDALLDGGGGGSGGGSGSGSASGDGCE
AGAWVELAEMGGDL*

mRNA from alignment at Contig_180:248910..256457+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17786 ID=mRNA_17786|Name=jgi.p|Trimin1|353736|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7548bp|location=Sequence derived from alignment at Contig_180:248910..256457+ (Tribonema minus UTEX_B_3156 )
ATGGGTGATAGCGAGGACATGGCGGAGCGTGGAAGCCCACTGCGGGCACG
CAATAGCGGGAAAGCTCAAGGGTTTTGGAGCAGGAAGCTGCTTAAGCGGC
GGCGCAGCGCAGAAGGTAAGAGATTCTTCTCCGACAGGCTGACAGAATCG
GCGGCATCAGCAATCAGCTGCGCGCTGCCCTAGCCGGCAAGTTGTTGGCG
TGCAAGCATGTTTCTACCCTGCGCCTTACATCCCGGCATGCTCGCCTACT
TTCATTGCAGGTTGACGATACACAAACTTGAAGCCGGCAACATGCATTGC
CATGCCTGCGTGTCGAAGTCTTTGTGTGGCAGTCGCACGCGGTATGGCTG
CTTCGTTGTAGAGCAGTGCACACCTCATCGTTGCTCCATGGTTTCTGACC
AACAGAAATCAACCTCACTTACGCCGAGGCACCCACCGCCATTACAGAAT
CAGCGGGTACGCACACAGCTCATCACCGTCATTTGCTATCCTGCACACCT
GCTCCGCCGTTGTCAGCTCGGGTGGAACTCGTGTCCTCATTCTTCGCCTC
CTGTGCAGCGTCACCCCTCTGGCGTGTCCATCAGTCATGCCATGCATGGC
ATGTGCTGTCACCACATGCCGCTCTTGCCTTGACGTTCGCCTCTCGTTTC
GCTGTATGCAAAATATGATGCCATTGGCCAAGTCAGTGCTTTGGAGTGCT
GCAGTTCTACCTGCTCTCGGCAGACCAAGTCGGCACATAAACCTGCTGAC
CAACCTCTGGGACGTGACTGTCGCTGTATGCAAAATGTAATGCCGTTGGC
CAAGTCAGTACTGTGGAGTGCTGCAATCGTACCTGCTCTCGGCAGGCCAA
GCCAGCACACGAATCTGCTGATCTGCCTCTCAGACGTGACTGTCGCTGTA
TGCAAATTATGATGCCATTGGCCGAATCAGTGCTTTGGAGTGCTGCAATA
GTACCTGCTCTCGGCAGGCCAAATCGGCACCTGAACCTGCTGACCACCCC
CTCAGACGTGACTGTCGCTGTATGCAGAATATAATGCCATTGGTCAAGTC
AGTGCTTTAGGGTGCTGCAATTGTACCTGCTCTCGGCAAGTCATGTCAGC
ACATGCCTTTGCTCGGATGCGACTGTCGCTGTATGCAAAAAATCATGCCA
TTGGCCAAGTCAGTGCTTCAGAGTGCTGCAATTGTACCTGCTCTCAGCAG
GCCAAGTCATCACTTGACTCTGCTGATCGAGCTCTCTGATGTGACTGCTC
TCGCACGCAGTTCGCAGCGTACTGAAAGAGGGCACGGAGCAGGGAGCATA
CACGACGCGCGCGCGCCTGGCGCTGGGCGCAGCGGCATCATTGTGGTGCC
TGGCATTCGTGACGCGGTCATGGTGGCCGCTGCGCGTGGCGCTGGTGGCG
CTGCTGCTCGAGGTGAGAGACTCTGCCCTCTGCCCTGTGGCAATGTGGGC
CTGACGTATCCCTGCTAGATCATCAAACATCCTTTGTGTGCATGGATCGG
CGTGATGCGCTGTCGCCGCATGTCTTCTGAGCGTTGCGGCCGGGACGTGG
ACGTAGCGCCTGCTGCCATCTGTGGATTGCGAGTGCGCGCCTGCTGACCT
CTAGGCCGTGAAGGCGCCCGTTTCTGTCTGCCGGGTCCTCCACAGCAAGC
GCTCACATCGCCTCCAGTTACACTCGACCGCTTGATCCCGGAGCTTGCAG
CGTGCGCAGCAGCTGGCTGCTCCGATGGCCCTTGATGCCGCCCCCACAAA
GAATTCCCTCACCCCATTTCCCCCCAATTTTCCATACCCCAGTTGCTGCT
ATAGATTCTCACTCCTCTATTAATGTCATCATCATTTCTTGCCCACGCAC
TTTATCATCTGCTGCTATAGATCACCATTTCTCCACAGCCTGTCCTCACA
TCTTGCCGCCAACACCGGTGCTCTGTGCTCACCGCCGCCAGCTGATACCG
CACTTGCTGCTATAGATCCTCACGCCTCCATTTTCATCCTCAACTCTCGC
CCGCACACTATTCATCTGCTCGCTGCCACCAGCCGCTGCTGCTGGCCTCA
GTGCTGCTGTGGAGGACGGGGCAGCTGGCGCGCAGCGTTTGAACTTCACC
ACTATTTACCAGAGCTCGTGTCGACCACAGTAACTGGCTGCTGCGCTGGC
TCTTGGCACTGCCTCCGTTGAGAGTCACCCCACCCCATCTTGCCCATTCT
GCCTAGTCCCTGTTTGCTGCTATAGATCCTCACTCACCCTCCTCCATCAT
CTTTTGCTCGCTGCCACCAGCCGCTGCTACATACTGGCCTCGGCGCTGCT
GTGGTGGACGGGTCAGCCGGCGCGCAGCATTTGCACTTTACCACCAAGTA
CCATCTGCCCATTCTGCCTATTCCCTGTTTGCTGCTGTAGATCCTCACTC
TCATCCTCTCTCGCCCGCACACTTTGTGCATCTATTCGCTACCACCAGCC
GCTGCTGATAGCCTCGGCGCTGCTGTGGTGGACGGGGCAGCCGGCGCGCA
GCCTGGCGAGCGACGGCATGGCAGCGGCGTGCTCCTTCGCGGCGGGCTTC
TGGTGGGCGGCGCCCGCTGCGGCTGTGGCAAGCGGCGCGATGCAGGTGAA
GTTGCTAGCGAGTGTTGTCACGCCCACACGGTGTCCGCTGCGGCTGTAGC
AAGAGGCGCGATGCAGGTGAAGTTGCTAGGGTGTCGTCACACCCTCACAT
GGTGTTATTGCTGGGTTGAGCGTCCACCGTTCCGACCGTTTTCGAAAGAT
GTTTGAACGTGACAACATTCGACTATCTGCACATGCTTGAGCCCCGGCGT
CCAGCACGCCCCCGCGGTGGCTTCAAGCGACGTCGTTGCCAACCAATTAA
GTGCAATGTTTTCAGTTGCTCCGCGCCTGAGGTCCGCACATGTACACACC
TCTGAGCCACACGAGCGCCTGATGGGGGCGCATTCAAGCCTGCCGGAAGG
CATCGCCGCGGTGTTTGATCGAGCGTGTGCAGAGGGGGCCGGCCAGCGCC
CCTGCTGGCACAGCAAGGCAGTGAAGTCAGAAGGTGCAGCTATCTTGCTG
ATGTTTCAAGATCAGCAAGCTTGCGATTCAGCATGGCCGCATGCTGCGTC
TAGCCGTTCTGGCGTGCCCCCCTCCCCCCCCCCCCCCCCCCCCCTTGCTT
GTGAGCGAGCCACATGCTTGCCCAGCCCCACTGCGGCGTCCCTGCTGCGG
TCGTGAATGGTCGTCGATCTCGAGAGGCCCATGGCACGATTGTTTCAACT
CAAGCGCGTGCGTGCGTCGTACTCACATGCGAGCATGCAGCATCATGGCT
GCAGCTTCTCGCTGACGGAGGCCCTGACTCAGTGCCCCAGCCTGTCTTCG
CCGCCCAAACCCCCTTCCCCTCCCTATGCGCGTGCGTGCAGCAGACTCAT
ACGCACACAAGCAGCATCATGCCTGCAGCCTGCCGCTGACTCAGCCCCTG
ACTCAGTGCCCCTGCCCCCTCCCCCCCCCCCCCCCTTGCTCGTCCGCGCA
GATCCTGCTGCTGCCGGCGCTGGCGGGGGTGATTGCCGTGTGGCCGCTGA
GCATGCCCGCTTTCGACTGCGCGACGGCGCAGGGCTGCCTGGTGCCGCTC
GAGGGGTCCCTCATGGTGCGCATCCTAAACATAATGCTAGGTCAACTACA
CGTGGTTAGGTTAGGGTTACGGTCAGGGTTAGGGTTAGGGCGCAGGCTGC
CTGGTGCCGCTGGAGGGCTCCCTCATGGCGCGCACACCGACGCTATCCCT
ACCTTTGACCGCTAGGGTTAGGGCTAGATTAGGGTGGTTTAGGTTTAGGG
GTAGGGTTAAGCTTGAGGTTAGGGTCAGGGTGATTCCTCGTGGTGCGCGC
ACGCTAGTGCCAACTATGCGTACCATCATTTGCAGTAACCTACTTGAAAG
TTGCCGTCGCGCAGGGCTGCCTGGTGCCTCTCGAGGGGTCCCTCATGGTG
CGCGCACTAATCCTAACCCTAAGTGCTGGTTAGCTCAGGGTAGGTCGGGT
TAATATTAGGGTTAGGGTTAGGATTAGGGCGCAGGGCTGCCTGGTGGCGC
TTGAGGGCTCCCTCATGGTGCGCACACTAACCCTAGCCCTAACCGCTAGG
GTCAGCAATGCGTGCCATCATTGAAGTAACGTACTTCAAGGTTGTGCAAC
CCTCATTGTCAGCAGCAGCCTTGCGCTTCCTGCCTGCTGTAACAGTGCTG
TTGCCACTTCATCGTCTGCCAGCTTCTGCGCGTCTGCCGGCAGATCCCTC
ATGATGCGTGCTTGCTATCGTCATTGATGTGTACTGTCGCCGCCTGCCGG
CTGCGGCGCCGCGCAACCGGCCCATGCGCGTCTGCCCCCCCACACCGACT
GCGCCAAACGTGCGTATGCGTATCGTCTGCGCAAACACCCTCCACACAAC
CCCCCCCCCCCCACGCCCTCCCCCCCACGTGCTGCTGCCGCCAGGACACG
GCCGCGGCGAACCCCGCCGTCTCCGGGCTGGCGCTGGCCGCGATCGCGTT
CCTCGGCGTCGCCGCCGCGGAGCAGTGGGCGCTGTCGCGCTGCTGCGCGG
CGGGCGCGCGGTGAGTGGCTGAACTCCTCATGTTCCTGATGATATTCTGA
CCACCAGATGCGTGGCTGAACTCCGCATATAAACAACATTTTGACACCAG
ATTCACGCAGCTGTGCTCTGTGCTGCCTGTGGCGTAGGTATGACAATGGC
GGGCCGCCTGGTAAGCCGTAAGCAACTACCCCTAACCCTAACCCCCTAAA
CCCCAAGCAGCTGAAGTCTTTTTCATGCGACCTGAGGTGGTGTAGATCTT
GCTCGCTTGAGCACGCTGATAGCGTGAACCCGGCACAGCTGTTGCAGCAG
ATCGCTGCTGGCGCCGCCGTGTCTGTCACGGGGCGCGGCGACGCCCGCCA
TTTCAGCATGCGTAGACCTGAGCGACGTCCTCCATCGCCGCACATGCTCT
GCAGCACTGCCTGCGCTGGCGCTGCACGCCAGCACGCACCGCTGTCGCAT
GCGCCTGCCTCGAGAGTACTCGTTGTGTAATGACAACGGGCGGTTCCGCT
GCATCGCTCATCGCACTGCCGTGTCTGTCATGGGACGCGGCAACACCCCA
TGATGCAGCACGCCTCGACGACTGTCACGGCCAGCTTAGCGCGCCTTCCG
CACGGTGCTGCCGGCGCTTGCGCTGCGCGTGCGCACTGGCGCCCCTCGCT
CGTACACCTCACATGTACTCCCCGTGTACTGACAGCGGTGCAGCGTGCGT
AGACCTCAGCGGCGTCCATCGCCGCACACCCCTGACAGTGCTGCCTGCGC
TGTGTGACGAGCGCAACCGCCGTTGCTTACTTCTCACAAATTCTTCTCCG
TGTGTACTGACAACGGCCGGTTCTGCTGCATCGCTCGTTGCGCTGCCGTG
TCTGTCGCGGGACGCGGCGACGCCCTCTGCAATGCCGCACGCCTCCACCG
TCACGGCCACCTTAGTGCGCCTTCCGCACATTGCGGCAGGCGCCTGCGCT
GTACGCGCGCCCGACGCCCCTCGCTCTTGCACCTCACAACTACCTACATA
CAGTACTCCTGCTCGTGTACTGAAAACATGCGGTTTTGTTGCATCGCGCA
GGCGCGATGGCGCGCAGCCCGCGGCGCCGCTGCGGCACGCCGTCGCCGCG
GCAGCGGGCATGGCGACGGCCAAGGGCCTCGTGCGCGTCATGGCGCTGCA
CCCGCTGCTGCTGCTGGACGGCGCGCAGGACAGGTATGTATGTGTGTATG
TATGCGTGGACTGCTAGGGTTAGGGGTAGGGTTAGGTCTTGCCCAACGTC
CGGGCATGCATACGAGTGCGCGCGCGTACAGCTTTGACGCAGGAAAAATG
CGGTGCGTGGTGTGGAGCGCCGCTGCATTAGTGTTGCCCGCTGTTCTGTC
ACCGGCAACTAGCAGTGAAGCGCGAGTCTGCACCAGTGCATCCTTCGGAT
TGCCAGCGCAATTTCGAAGCTCTCTCGGCGCGGCGTGCCCTGCTGCTTGT
ACATGGCGCGAATGCGTCGCTCAGTCGTTGGTGACATTGCGAGCGGCGCG
TCAGCGCTCGCGCAGGAGCCGTGCACCGCACGTGCAACAAGGCCGTGCGG
CAGCATTGCGCTGCGGGCGTGGCCTCAGCGGCGGCGCCCTTCTGCGCGGG
AGAGCTGCCGATGGCGCTGTGTGAAGGCTGCTGAATGCAATGCCGCTGAA
GCGGAGCCGCGCTTGTGCCTCGTGAGACCCTGCCGGTGCGCTCATCGCAT
GTTGCTGAGCGCTGTGACAACAGGCAGTTACGCATCAGAACCTCTGAATT
GAGCGCGCGCGTTGGGACTGCCGCTTGACGCAGCACAGTAGTATTTGTTG
AGGCCGCACGGAGCGAGATGGGCATCTGGACGGAGATTGCACAAACTGAA
AGTGCAAGTTGAAGCGGCGTTAACAGCAAATGGCGCGCCTGCACAATCTG
AAATTGAAGTTGCACGGAGTTGACACGCGACCTGTCGCCTTGTGCCCGCC
CGCCGCAGGATGTCGCCACCCTTCGTGCCGACGCTCGCGCCGCTGCTGGT
GACTTGCGCCGTGCTGCAGCTGGTGGACAGCGCGGCGGCAGCGGCAGCAG
CGCCGCAGCAGCAGCGCAGCAAGTGAGCAACTAGAGCACTTGCTGCTTGT
GCGGGCGTGTTGAGCCGTGTCCACCCATGCATGATGCACGTTTACACTAT
GCGGAAGCGCCCATGTTGCCGGCGTCGCCGTGCGCTGCTGCGCCAAGTCG
GCGACATGGCTTTAACGGCCTGGCAGCATCTGCGAGGGCGCCGCGCCCGC
CGCCGTGACACCTCCGCAGCTCCATGGCTACTGCTTGTTGTGACCATTAT
TTGCAGCGCGCAGCATCGACGGCCGCGCCTACTGCGTCATGCGCTATGTT
CTTATGCGGTGCACTGGCGTCGCCTGTTCCCCCCTCCCCCCCCCCCGCCC
CTCCCAAAGGCGCATGGCAGTTGCTCCGATGGCCAGCCACGCTGCCTCAG
ATGGCGCGCCCATGTATTTCTGCAAGCATGCACAAAACGTGCATCTTCCC
TATAGAATGCAACGCGTACCGCCTCGCACACACACGCGCCGCTCACCGCC
GCGCCCGCCGCCGCCTGCGCACCGCAGCAGCGACAGCAGCTGCGGCGGCG
GCGGCGCGTGGCGCGCGCTGAGGTGGCCCGTCGCGCTGCACGGCGCGTAT
GCGCTGCTGGGCACCGTCGGCGCCACGTGCGCGTGGCCAGTGGCCGCCAC
GGCGATAGCGCGCGCCGCACTCGTCGGCGGCGCCGCTGCGGCGGCGTGGC
GGCGGCTGCTATCGAGCCCGCTGTACGACGCGCTGCTGGACGGCGGCGGC
GGCGGCAGCGGCGGCGGCAGCGGCAGCGGCAGTGCATCAGGCGACGGCTG
CGAGGCCGGCGCGTGGGTTGAGCTTGCTGAAATGGGAGGCGATCTGTAGG
GCGCACGCGGTGCGGCGTGCACTGGACACACGTCGGGCAGCGACATGGCA
GCCCATAGCAGCGCAGCGGGAGCGCGGAGTTGTCACACACGAACGCCC

Coding sequence (CDS) from alignment at Contig_180:248910..256457+

>mRNA_17786 ID=mRNA_17786|Name=jgi.p|Trimin1|353736|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1245bp|location=Sequence derived from alignment at Contig_180:248910..256457+ (Tribonema minus UTEX_B_3156 )
ATGGGTGATAGCGAGGACATGGCGGAGCGTGGAAGCCCACTGCGGGCACG
CAATAGCGGGAAAGCTCAAGGGTTTTGGAGCAGGAAGCTGCTTAAGCGGC
GGCGCAGCGCAGAAGTTCGCAGCGTACTGAAAGAGGGCACGGAGCAGGGA
GCATACACGACGCGCGCGCGCCTGGCGCTGGGCGCAGCGGCATCATTGTG
GTGCCTGGCATTCGTGACGCGGTCATGGTGGCCGCTGCGCGTGGCGCTGG
TGGCGCTGCTGCTCGAGCCGCTGCTGATAGCCTCGGCGCTGCTGTGGTGG
ACGGGGCAGCCGGCGCGCAGCCTGGCGAGCGACGGCATGGCAGCGGCGTG
CTCCTTCGCGGCGGGCTTCTGGTGGGCGGCGCCCGCTGCGGCTGTGGCAA
GCGGCGCGATGCAGATCCTGCTGCTGCCGGCGCTGGCGGGGGTGATTGCC
GTGTGGCCGCTGAGCATGCCCGCTTTCGACTGCGCGACGGCGCAGGGCTG
CCTGGTGCCGCTCGAGGGGTCCCTCATGGGCTGCCTGGTGCCTCTCGAGG
GGTCCCTCATGGACACGGCCGCGGCGAACCCCGCCGTCTCCGGGCTGGCG
CTGGCCGCGATCGCGTTCCTCGGCGTCGCCGCCGCGGAGCAGTGGGCGCT
GTCGCGCTGCTGCGCGGCGGGCGCGCGGCGCGATGGCGCGCAGCCCGCGG
CGCCGCTGCGGCACGCCGTCGCCGCGGCAGCGGGCATGGCGACGGCCAAG
GGCCTCGTGCGCGTCATGGCGCTGCACCCGCTGCTGCTGCTGGACGGCGC
GCAGGACAGGATGTCGCCACCCTTCGTGCCGACGCTCGCGCCGCTGCTGG
TGACTTGCGCCGTGCTGCAGCTGGTGGACAGCGCGGCGGCAGCGGCAGCA
GCGCCGCAGCAGCAGCGCAGCAACAGCGACAGCAGCTGCGGCGGCGGCGG
CGCGTGGCGCGCGCTGAGGTGGCCCGTCGCGCTGCACGGCGCGTATGCGC
TGCTGGGCACCGTCGGCGCCACGTGCGCGTGGCCAGTGGCCGCCACGGCG
ATAGCGCGCGCCGCACTCGTCGGCGGCGCCGCTGCGGCGGCGTGGCGGCG
GCTGCTATCGAGCCCGCTGTACGACGCGCTGCTGGACGGCGGCGGCGGCG
GCAGCGGCGGCGGCAGCGGCAGCGGCAGTGCATCAGGCGACGGCTGCGAG
GCCGGCGCGTGGGTTGAGCTTGCTGAAATGGGAGGCGATCTGTAG