Trimin1|353736|estExt_Genemark1.C_Ctg_1800021 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353736
Unique NameTrimin1|353736|estExt_Genemark1.C_Ctg_1800021
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length415
Homology
[Close]
BLAST of jgi.p|Trimin1|353736 vs. uniprot
Match: A0A835Z4R8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4R8_9STRA)

HSP 1 Score: 682 bits (1761), Expect = 1.230e-245
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0 
Query:    1 MGDSEDMAERGSPLRARNSGKAQGFWSRKLLKRRRSAEVRSVLKEGTEQGAYTTRARLALGAAASLWCLAFVTRSWWPLRVALVALLLEPLLIASALLWWTGQPARSLASDGMAAACSFAAGFWWAAPAAAVASGAMQILLLPALAGVIAVWPLSMPAFDCATAQGCLVPLEGSLMXXXXXXXXXXXDTAAANPAVSGLALAAIAFLGVAAAEQWALSRCCAAGARRDGAQPAAPLRHAVAAAAGMATAKGLVRVMALHPLLLLDGAQDRMSPPFVPTLAPLLVTCAVLQLVDSAXXXXXXXXXXXXXXXXXXXXXXAWRALRWPVALHGAYALLGTVGATCAWPVAATAIARAALVGGAAAAAWRRLLSSPLYDALLDGGGGGSXXXXXXXXXXXDGCEAGAWVELAEMGGDL 414
            MGDSEDMAERGSPLRARNSGKAQGFWSRKLLKRRRSAEVRSVLKEGTEQGAYTTRARLALGAAASLWCLAFVTRSWWPLRVALVALLLEPLLIASALLWWTGQPARSLASDGMAAACSFAAGFWWAAPAAAVASGAMQILLLPALAGVIAVWPLSMPAFDCATAQGCLVPLEGSLMXXXXXXXXXXXDTAAANPAVSGLALAAIAFLGVAAAEQWALSRCCAAGARRDGAQPAAPLRHAVAAAAGMATAKGLVRVMALHPLLLLDGAQDRMSPPFVPTLAPLLVTCAVLQLVDSAXXXXXXXXXXXXXXXXXXXXXXAWRALRWPVALHGAYALLGTVGATCAWPVAATAIARAALVGGAAAAAWRRLLSSPLYDALLDGGGGGSXXXXXXXXXXXDGCEAGAWVELAEMGGDL
Sbjct:    1 MGDSEDMAERGSPLRARNSGKAQGFWSRKLLKRRRSAEVRSVLKEGTEQGAYTTRARLALGAAASLWCLAFVTRSWWPLRVALVALLLEPLLIASALLWWTGQPARSLASDGMAAACSFAAGFWWAAPAAAVASGAMQILLLPALAGVIAVWPLSMPAFDCATAQGCLVPLEGSLMXXXXXXXXXXXDTAAANPAVSGLALAAIAFLGVAAAEQWALSRCCAAGARRDGAQPAAPLRHAVAAAAGMATAKGLVRVMALHPLLLLDGAQDRMSPPFVPTLAPLLVTCAVLQLVDSAXXXXXXXXXXXXXXXXXXXXXXAWRALRWPVALHGAYALLGTVGATCAWPVAATAIARAALVGGAAAAAWRRLLSSPLYDALLDGGGGGSXXXXXXXXXXXDGCEAGAWVELAEMGGDL 414
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353736 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z4R8_9STRA1.230e-245100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_180contigContig_180:248910..256358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353736mRNA_17786Tribonema minus UTEX_B_3156 mRNAContig_180 248910..256457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353736|estExt_Genemark1.C_Ctg_1800021 ID=Trimin1|353736|estExt_Genemark1.C_Ctg_1800021|Name=jgi.p|Trimin1|353736|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=415bp
MGDSEDMAERGSPLRARNSGKAQGFWSRKLLKRRRSAEVRSVLKEGTEQG
AYTTRARLALGAAASLWCLAFVTRSWWPLRVALVALLLEPLLIASALLWW
TGQPARSLASDGMAAACSFAAGFWWAAPAAAVASGAMQILLLPALAGVIA
VWPLSMPAFDCATAQGCLVPLEGSLMGCLVPLEGSLMDTAAANPAVSGLA
LAAIAFLGVAAAEQWALSRCCAAGARRDGAQPAAPLRHAVAAAAGMATAK
GLVRVMALHPLLLLDGAQDRMSPPFVPTLAPLLVTCAVLQLVDSAAAAAA
APQQQRSNSDSSCGGGGAWRALRWPVALHGAYALLGTVGATCAWPVAATA
IARAALVGGAAAAAWRRLLSSPLYDALLDGGGGGSGGGSGSGSASGDGCE
AGAWVELAEMGGDL*
back to top