Trimin1|351822|estExt_Genemark1.C_Ctg_1000062 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351822
Unique NameTrimin1|351822|estExt_Genemark1.C_Ctg_1000062
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length337
Homology
BLAST of jgi.p|Trimin1|351822 vs. uniprot
Match: A0A835ZGJ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGJ6_9STRA)

HSP 1 Score: 663 bits (1710), Expect = 1.740e-240
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0
Query:    1 MTAKEASAKLSARLRLPQSELRQYDLIVVHATPQGLRLRTLQDDDNVTDVRARAAAKLPPCDTCSGAAANLDVPLHQFSGFENMGRGIGQGTEAPGSWTPPFVNPFADETTAAEESAAAARDIEELLEIVLQGDQPPEDDGEGRGLSPNFLATLCALDDLPEPDEWLLPPAAEPVVGRRVVRFSEPERCADDAQAGAEAAMFGSVVPDMPPVQLSQPPYDQRYEEPATSFEFLIPTIDNVPVEVGDGSLEAKGVVVTTGGGDGGELKRATSESSDGASSQDNVDVTSRYRRKRQRRVDDSDRPAVCVKRTELANRRPRVNGRFISQPSNFKPVTEM 336
            MTAKEASAKLSARLRLPQSELRQYDLIVVHATPQGLRLRTLQDDDNVTDVRARAAAKLPPCDTCSGAAANLDVPLHQFSGFENMGRGIGQGTEAPGSWTPPFVNPFADETTAAEESAAAARDIEELLEIVLQGDQPPEDDGEGRGLSPNFLATLCALDDLPEPDEWLLPPAAEPVVGRRVVRFSEPERCADDAQAGAEAAMFGSVVPDMPPVQLSQPPYDQRYEEPATSFEFLIPTIDNVPVEVGDGSLEAKGVVVTTGGGDGGELKRATSESSDGASSQDNVDVTSRYRRKRQRRVDDSDRPAVCVKRTELANRRPRVNGRFISQPSNFKPVTEM
Sbjct:    1 MTAKEASAKLSARLRLPQSELRQYDLIVVHATPQGLRLRTLQDDDNVTDVRARAAAKLPPCDTCSGAAANLDVPLHQFSGFENMGRGIGQGTEAPGSWTPPFVNPFADETTAAEESAAAARDIEELLEIVLQGDQPPEDDGEGRGLSPNFLATLCALDDLPEPDEWLLPPAAEPVVGRRVVRFSEPERCADDAQAGAEAAMFGSVVPDMPPVQLSQPPYDQRYEEPATSFEFLIPTIDNVPVEVGDGSLEAKGVVVTTGGGDGGELKRATSESSDGASSQDNVDVTSRYRRKRQRRVDDSDRPAVCVKRTELANRRPRVNGRFISQPSNFKPVTEM 336          
BLAST of jgi.p|Trimin1|351822 vs. uniprot
Match: A0A836CN83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN83_9STRA)

HSP 1 Score: 500 bits (1288), Expect = 2.620e-177
Identity = 255/261 (97.70%), Postives = 257/261 (98.47%), Query Frame = 0
Query:   77 QFSGFENMGRGIGQGTEAPGSWTPPFVNPFADETTAAEESAAAARDIEELLEIVLQGDQPPEDDGEGR-GLSPNFLATLCALDDLPEPDEWLLPPAAEPVVGRRVVRFSEPERCADDAQAGAEAAMFGSVVPDMPPVQLSQPPYDQRYEEPATSFEFLIPTIDNVPVEVGDGSLEAKGVVVTTGGGDGGELKRATSESSDGASSQDNVDVTSRYRRKRQRRVDDSDRPAVCVKRTELANRRPRVNGRFISQPSNFKPVTEM 336
            +FSGFENMGRGIGQG EAPGSWTPPFVNPFADETTAAEESAAAARDIEELLEIVLQGDQPPEDDGEGR GLSPNFLATLCALDDLPEPDEWLLPPAAEPVVGRRVVRFSEPERCADDAQAGAEAAMFGSVVP+MPPVQLSQPPYDQRYEEPATSFEFLIPTIDNVPVE GDGS EAKGVVVTTGGGDGGELKRATSESSDGASSQDNVDVTSRYRRKRQRRVDDSDRPAVCVKRTELANRRPRVNGRFISQPSNFKPVTEM
Sbjct:    6 EFSGFENMGRGIGQGLEAPGSWTPPFVNPFADETTAAEESAAAARDIEELLEIVLQGDQPPEDDGEGRRGLSPNFLATLCALDDLPEPDEWLLPPAAEPVVGRRVVRFSEPERCADDAQAGAEAAMFGSVVPEMPPVQLSQPPYDQRYEEPATSFEFLIPTIDNVPVEGGDGSPEAKGVVVTTGGGDGGELKRATSESSDGASSQDNVDVTSRYRRKRQRRVDDSDRPAVCVKRTELANRRPRVNGRFISQPSNFKPVTEM 266          
BLAST of jgi.p|Trimin1|351822 vs. uniprot
Match: A0A835ZFB7_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFB7_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.470e-36
Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0
Query:    1 MTAKEASAKLSARLRLPQSELRQYDLIVVHATPQGLRLRTLQDDDNVTDVRARAAAKLPPCDTCSGAAANLDVPLHQ 77
            MTAKEASAKLSARLRLPQSELRQYDLIVVHATPQGLRLRTL+D DNVT+VRARAAAKLPPCDTCSGAAANLDVPL Q
Sbjct:   47 MTAKEASAKLSARLRLPQSELRQYDLIVVHATPQGLRLRTLRDGDNVTEVRARAAAKLPPCDTCSGAAANLDVPLLQ 123          
BLAST of jgi.p|Trimin1|351822 vs. uniprot
Match: A0A835ZB73_9STRA (CCT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB73_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.800e-20
Identity = 87/253 (34.39%), Postives = 120/253 (47.43%), Query Frame = 0
Query:  112 AAEESAAAARDIEELLEIVLQGD--QPPEDDGEGRGLSPNFLATLCALDDLPEPDEWLLPPAAEPVVG------RRVVRFSEPERCADDAQAGAEAAMFGSVVPDMPPVQLSQP--PYD----------QRYEEPATSFEFL--IPTIDNVPVEVGDGSLEAKGVVVTTGGGDGGELKRATSESSD------GASSQDNVDVTSRYRRKRQRRVDDSDRPAVCVKRTELANRRPRVNGRFISQPSNFKPVTEM 336
            AA E AAA   I++LL+++L  D  +P          SP+F +     D LP  ++WLLPP A P         R V+    PE+     Q     + + + V   P  Q  QP  P+           +    P TSF FL  IP + ++P+E GDG        +T         +  T+ + D       A+ ++      RY +KRQRR+  + RPAV V+RTELAN RPRV GRFISQPS F PVT +
Sbjct:   15 AATEQAAA---IDDLLDLILLSDGVRPEGAPTSSPHFSPSFWSIFSDPDALPAAEDWLLPPPAAPAAPLVAPEPRHVIVVRSPEQ----QQQHLNKSRYLTEVNSAPLSQRQQPQRPFSAVGGASSAPFKPQPAPTTSFAFLDLIPKVASIPIE-GDGPAAHAPTTITPVHHGWAAKRTVTAAAIDLGAGAVKAAPREKRAKVERYLQKRQRRMQQASRPAVYVRRTELANARPRVAGRFISQPSGFVPVTRL 259          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351822 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835ZGJ6_9STRA1.740e-240100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CN83_9STRA2.620e-17797.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZFB7_9STRA2.470e-3694.81PH domain-containing protein n=1 Tax=Tribonema min... [more]
A0A835ZB73_9STRA1.800e-2034.39CCT domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_100contigContig_100:417345..419253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351822mRNA_10056Tribonema minus UTEX_B_3156 mRNAContig_100 417345..419384 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351822|estExt_Genemark1.C_Ctg_1000062 ID=Trimin1|351822|estExt_Genemark1.C_Ctg_1000062|Name=jgi.p|Trimin1|351822|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=337bp
MTAKEASAKLSARLRLPQSELRQYDLIVVHATPQGLRLRTLQDDDNVTDV
RARAAAKLPPCDTCSGAAANLDVPLHQFSGFENMGRGIGQGTEAPGSWTP
PFVNPFADETTAAEESAAAARDIEELLEIVLQGDQPPEDDGEGRGLSPNF
LATLCALDDLPEPDEWLLPPAAEPVVGRRVVRFSEPERCADDAQAGAEAA
MFGSVVPDMPPVQLSQPPYDQRYEEPATSFEFLIPTIDNVPVEVGDGSLE
AKGVVVTTGGGDGGELKRATSESSDGASSQDNVDVTSRYRRKRQRRVDDS
DRPAVCVKRTELANRRPRVNGRFISQPSNFKPVTEM*
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