mRNA_1439 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|161967
Unique Name	mRNA_1439
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|161967 vs. uniprot
Match: A0A835Z860_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z860_9STRA)

HSP 1 Score: 472 bits (1215), Expect = 4.360e-166
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 1

Query:    1 MIDIPDFVSFKAAQQGRVDVLRWLHDSGSMSIADDIFETXXXXXXXXXXXXGLESGYGVRSGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKHKCLWSITAECTRALREGDLPTLERCISEGLPLDKDLIMQACKYGQLNVVKWLRGRGCPWDGNQVLLCATKVXXXXXXXXXXXXXXXXNDGLDGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTFAAIEMGDVEVVKWLRSVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSHECLEYL 918
            MIDIPDFVSFKAAQQGRVDVLRWLHDSGSMSIADDIFETXXXXXXXXXXXXGLESGYGVRSGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKHKCLWSITAECTRALREGDLPTLERCISEGLPLDKDLIMQACKYGQLNVVKWLRGRGCPWDGNQVLLCATKVXXXXXXXXXXXXXXXXNDGLDGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTFAAIEMGDVEVVKWLRSVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSHECLEYL
Sbjct:    1 MIDIPDFVSFKAAQQGRVDVLRWLHDSGSMSIADDIFETXXXXXXXXXXXXGLESGYGVRSGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKHKCLWSITAECTRALREGDLPTLERCISEGLPLDKDLIMQACKYGQLNVVKWLRGRGCPWDGNQVLLCATKVXXXXXXXXXXXXXXXXNDGLDGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTFAAIEMGDVEVVKWLRSVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSHECLEYL 306

[Close]

BLAST of jgi.p|Trimin1|161967 vs. uniprot
Match: A0A835Z1R7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1R7_9STRA)

HSP 1 Score: 347 bits (891), Expect = 1.690e-118
Identity = 176/193 (91.19%), Postives = 179/193 (92.75%), Query Frame = 1

Query:  340 SITAECTRALREGDLPTLERCISEGLPLDKDLIMQACKYGQLNVVKWLRGRGCPWDGNQVLLCATKVXXXXXXXXXXXXXXXXNDGLDGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTFAAIEMGDVEVVKWLRSVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSHECLEYL 918
            +ITAECTRAL+EGDLP LERCISEGLPLDKDLIMQACKYGQLNVVK LRGRGCPWDGN+VLLCATKV      XXXXXXXX   DGLDGFESYVAAIRRGD EMFTWLHAEDCPVKDSLRGDLTFAAIE GDVEVVKWL SVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSHECLEYL
Sbjct:    3 AITAECTRALQEGDLPALERCISEGLPLDKDLIMQACKYGQLNVVKRLRGRGCPWDGNKVLLCATKVPNIDMAXXXXXXXXNWTDGLDGFESYVAAIRRGDREMFTWLHAEDCPVKDSLRGDLTFAAIETGDVEVVKWLSSVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSHECLEYL 195

[Close]

BLAST of jgi.p|Trimin1|161967 vs. uniprot
Match: A0A2J7ZW18_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZW18_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 1.480e-5
Identity = 35/116 (30.17%), Postives = 52/116 (44.83%), Query Frame = 1

Query:  367 LREGDLPTLERCISEGLPLDKDLIMQACKYGQLNVVKWLRGRGCPWDGNQVLLCATKVXXXXXXXXXXXXXXXXNDGLDGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTF 714
            L E  L +L++C+         L+ +A + G + ++ WLR RGCPWD + +  CA +                  DG  G + Y+  +R GDW M   L    CP +   RG  TF
Sbjct: 2327 LLEQQLVSLQQCLP--------LLPEAAQSGSMELLAWLRDRGCPWDEDSIY-CAAEAGSEDPGGP---------DGQGG-DPYLRPVRHGDWAMLACLRRVGCPWRPLNRGGGTF 2423

[Close]

BLAST of jgi.p|Trimin1|161967 vs. uniprot
Match: A0A2J8A5H4_9CHLO (Ankyrin repeat domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A5H4_9CHLO)

HSP 1 Score: 57.4 bits (137), Expect = 1.950e-5
Identity = 44/168 (26.19%), Postives = 64/168 (38.10%), Query Frame = 1

Query:  364 ALREGDLPTLERCISEGLPLDKDLI-------MQACKYGQLNVVKWLRGRGCPWDGNQVLLCATKVXXXXXXXXXXXXXXXXNDGLDGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTFAAIEMGDVEVVKWLRSVGYTPDASCS-GIAAERNDLPMLKYLHE 843
            A R G LP +       L   + L+         A + G + ++ WLR RGC WD   ++  A                     G  G + Y+ A  +GDW     LH   CP + S  G    +A   G V V++ L  +G   D   + G A E  D  +  +L E
Sbjct: 1990 AARAGHLPVMSWLYDTQLVAPEWLVENGTGMLTDAARLGSVEMLAWLRERGCVWDDRILIAAAEAGSQEAIEWLVAQGYPTEEPGGAGDDPYIPAALQGDWATLACLHRLGCPWQPS--GVAFTSAARWGQVPVLRRLLELGCPVDWQAALGAAEESGDASVWAWLEE 2155

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|161967 vs. uniprot

BLAST of jgi.p|Trimin1|161967 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A835Z860_9STRA	4.360e-166	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835Z1R7_9STRA	1.690e-118	91.19	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A2J7ZW18_9CHLO	1.480e-5	30.17	Uncharacterized protein n=1 Tax=Tetrabaena sociali...	[more]
A0A2J8A5H4_9CHLO	1.950e-5	26.19	Ankyrin repeat domain-containing protein n=1 Tax=T...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_18	contig	Contig_18:1057787..1062797 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|161967\|e_gw1.18.87.1
BRITE	br01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03029,ko04121,ko04131
KEGG Module	M00177
KEGG Pathway	ko03010,ko04144,map03010,map04144
KEGG ko	ko:K02942,ko:K11981
EC	2.3.2.27
Preferred name	ANKRD60
Description	spectrin binding
COG category	I
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG0666@1\|root,KOG0297@1\|root,KOG0297@2759\|Eukaryota,KOG4177@2759\|Eukaryota
Evalue	2.35e-05
Seed ortholog	2903.EOD06107
Hectar predicted targeting category	other localisation
TranscriptId	162289
Track	FilteredModels1
ProteinId	161967

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|161967	gene_1439	Tribonema minus UTEX_B_3156	gene	Contig_18 1057787..1062797 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_1439_1	exon_1439_1	Tribonema minus UTEX_B_3156	exon	Contig_18 1057787..1058115 +
exon_1439_2	exon_1439_2	Tribonema minus UTEX_B_3156	exon	Contig_18 1058470..1058480 +
exon_1439_3	exon_1439_3	Tribonema minus UTEX_B_3156	exon	Contig_18 1062220..1062797 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_1439	CDS_1439	Tribonema minus UTEX_B_3156	CDS	Contig_18 1057787..1058115 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|161967	Trimin1\|161967\|e_gw1.18.87.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_18 1057787..1062797 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_18:1057787..1062797+
coding sequence from alignment at Contig_18:1057787..1062797+

spliced messenger RNA

>mRNA_1439 ID=mRNA_1439|Name=jgi.p|Trimin1|161967|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=918bp|location=Sequence derived from alignment at Contig_18:1057787..1062797+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGATCGACATACCAGACTTTGTGTCTTTTAAGGCGGCGCAGCAGGGGAG
GGTGGATGTGTTGAGGTGGTTGCACGACTCCGGCAGCATGTCCATTGCCG
ACGACATCTTTGAGACAGCAGCGAAAGCAGGACATGTAGATGTTGTGGCG
TGGGGTCTCGAGAGTGGCTATGGGGTTCGCTCTGGGGTGCTCGAGGCCGC
CGCTGCCGAGGGGCACTTTCACATACTCAAGTGGGCACACGCGGCCGGTG
TGCCATTCACAGAGTGGGTGCTGCGCGATGCGATATACTGCGGCAAGCTC
AACATCATCAAGTGGCTGTGCAAGCACAAGTGTTTATGGTCGATCACGGC
TGAATGCACAAGAGCTTTGCGGGAAGGTGACTTGCCTACACTAGAGCGCT
GCATAAGTGAGGGGCTGCCGCTGGACAAAGACCTCATCATGCAGGCCTGC
AAATACGGCCAGCTGAACGTTGTCAAGTGGCTGCGGGGACGCGGCTGCCC
GTGGGACGGCAACCAAGTCCTGTTGTGCGCTACCAAGGTCCCGAACATTG
ACATGGCCAAGTGGGTGCGAGCCCAGGGGTGCAATTGGAATGACGGCCTA
GATGGATTTGAGTCGTATGTTGCCGCCATCCGGAGGGGGGACTGGGAGAT
GTTCACATGGCTACATGCTGAAGATTGCCCTGTTAAGGATTCGCTGAGGG
GTGATCTCACCTTTGCAGCCATTGAGATGGGTGACGTAGAAGTTGTCAAA
TGGCTGCGCAGTGTGGGTTACACACCTGACGCAAGTTGCAGTGGGATAGC
GGCGGAGCGCAATGACCTGCCCATGCTGAAGTACCTACACGAGAGTGGTG
TACCTTGGGATGAATACACTGCGGTCACGGCGCTCGAAGCTGGCAGCCAC
GAGTGCTTGGAGTACCTG

protein sequence of jgi.p|Trimin1|161967

>Trimin1|161967|e_gw1.18.87.1 ID=Trimin1|161967|e_gw1.18.87.1|Name=jgi.p|Trimin1|161967|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=306bp
MIDIPDFVSFKAAQQGRVDVLRWLHDSGSMSIADDIFETAAKAGHVDVVA
WGLESGYGVRSGVLEAAAAEGHFHILKWAHAAGVPFTEWVLRDAIYCGKL
NIIKWLCKHKCLWSITAECTRALREGDLPTLERCISEGLPLDKDLIMQAC
KYGQLNVVKWLRGRGCPWDGNQVLLCATKVPNIDMAKWVRAQGCNWNDGL
DGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTFAAIEMGDVEVVK
WLRSVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSH
ECLEYL

mRNA from alignment at Contig_18:1057787..1062797+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1439 ID=mRNA_1439|Name=jgi.p|Trimin1|161967|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5011bp|location=Sequence derived from alignment at Contig_18:1057787..1062797+ (Tribonema minus UTEX_B_3156 )
ATGATCGACATACCAGACTTTGTGTCTTTTAAGGCGGCGCAGCAGGGGAG
GGTGGATGTGTTGAGGTGGTTGCACGACTCCGGCAGCATGTCCATTGCCG
ACGACATCTTTGAGACAGCAGCGAAAGCAGGACATGTAGATGTTGTGGCG
TGGGGTCTCGAGAGTGGCTATGGGGTTCGCTCTGGGGTGCTCGAGGCCGC
CGCTGCCGAGGGGCACTTTCACATACTCAAGTGGGCACACGCGGCCGGTG
TGCCATTCACAGAGTGGGTGCTGCGCGATGCGATATACTGCGGCAAGCTC
AACATCATCAAGTGGCTGTGCAAGCACAAGTGCCCCGGGTGGGACAGCAA
CCTGCCTGCAATGGCGAACATCTATACACGCCAGATCGTCAAGAGATGGC
TCGTGCTCAACAACACACGTGCACGCCGCACTGGTAGGGGGGCGCGCAAG
TGAGAGCGAGGCGTTTGGCGGGGGAGCAGCACACTCACAGCACCGATGAC
AAGGTGAGCCAACGTTAAGTCGCATACTTGGTTTGTGTGCACAACTTGTG
AGCTACATCCTGGTCCATGCATTGGCGTGTGCAGAACCTGGCTCCGCACG
CATTGCAATTCACACTGCTCACATTGCAGCACCGTTTTCGATCACACTTG
TGTAAGATTTCGCGTCTCAGTACGACCGTCGAGGTGTTTATGGTGTTTTG
AGTGAGTGCAGTGTTCTCTGTGAGTACAATTGCTTTCCTAGCCCACTGGC
CACTCGGCGACCCTACGCCGACTACCATGACGCATGATGTGTGGACGTCA
TAGGTGTCCACCAGGTGTCGCAGTTGCGGCAATCTCAGATTGTGTAGGTC
TGCAAGGGGAACATAGCGCCGTTCACATACACCGGACATTGCAGCTTCCA
CAGACGAGTACATGAGGGCCGCTGCGCCTCGTCCGTGCACTTCATGCATA
CGGCGTGCGAGGCTAACGGCTTCGTTGGGGCACCGCTGCAACTGTTCGAT
AATGCTTTCGATTTGCAACGTTACTAGCCCTCTGTCCATTCCGCGTATAC
ATTCCATTGATATACTATATTTTGTGTTGTCCGCGAGCAGGTGCTTCGGA
CCGGCAACTGGTGAAAGGGGGGCAAGTTTCAACAGACGTGGTCATCAACA
TTCAATAGAATTCGATTCTACTATACATTCTATGCTGTATGCATACTCTT
GTTTTTTATGTTTGCTTGTGCTTGAGGTTCTCCGCATGATGTTGCTCTTG
CAAGCGTCTGAACTCGCTGCGTGCATCGGGCGCAACAGATTTCACAGCGT
CAATGCAGTAGCACTCGATATCTGGAGACGCAATGACTCGTCAGCATACA
CACGCGCCTTGAAACGCACACGCATCAGGGAGGCACAGCTGCCGCCCACT
CTGGACGTTTCTGATGCTGTAGCATGCAAATCGCAAGAGCTGAAGCAGCA
GATACAGACTGTAATGCAGCAGCATGTTGTGAAGGCAGACCAGCAAAGTG
CCAAGGAGGTCAAGAGCTTGAATGCTGAAAATATGCTGAATGCATGTGCA
CCAGTAGTATTGACTGAGGAAGCCACCGCTCGCGTCAAGCAAGCTGTGCA
GACTGCATGTGCGCTGAAGCAAGTAGAGGCAGATGCTGCCGCTGCTGCAG
AACGTGCATGTGCTGCGTCTGTGGCAGCTGCTCTTAAAGCAGAGAAGGCA
GTAGCTGATGCAAGAGTGGCTGCAAACCGTCTAGAGAGTGATGATCTGCA
GGCCAAGACACGAATTGATTCAGCAGAGAGGGCAAAGGCTGATGCACTGG
AGGCCGCTGCACTTGCAGCTGCTGCAGCGAAGCGCGCGGAGGAGCGGCGT
GAACGCGACGCTGCTGCCACTATAGCTAGTGTTCTCCAAGCAATGACTGT
GGCAAAGGTGAAAGACTGCATAGCTGCCAAGCAGGTGACTGGAGAAGTGT
ACAAGAAGCGAGGACTGGCAGCAGAAGATGAAGTTATCAAAGATTATGAG
AAGCGCTCTCGCCAGCGAGTGGTGATGCGCAACAACATTTTCTACAAGAA
GGCGATCAGCGATGCAGTATGTGTAGGGGGTAAGATTGACGGCATACGTG
CAGATGGACGCAGACTGGTGGAGGTTAAAAAGAGGCAGAATCGGCTGTTC
AAATATGTCCCTGACTATGAGCGAGTCCAGGTCATGTGCTACATGTTTTT
GACGGACATTCACGTTTGTGACCTAGTCCAGAAGTTTGACGGGTCGAGTA
GCACTGATACTTTGACTTTCGATGCTCTAGAGTGGGAAAGGATCTCGGTT
GCTGCGCTCGAGTTTGCCGCATGGCTGCAGCACATCATGGCAAATGAGCA
TGAGCAGGAGGATCTGATTCGAATCGTAGAGGAGGAAAAGAGAAAGGAGT
GAGATGTTACCCGAATAGTGCTCTGTCTACAGACTCCAGTGTTTCGAAAC
TGTGGTGGCGGCTGTTGGTCATCTGCGCTACAGGTGCAGGCGGGTCGTCA
TACCAATGCATTGTGCCTATGACTGCAACTGGTGTTTTCAGGACTGTTGG
TGCTGTCCCGTGCTCTGTTGCGTAGGCATCAATTTCATGCCTGTTATGCA
CCTGTTCCAGATCGACTACCTTTGGCTTGGTGTGAAAGAGGTCAGCCACT
GGTCCCCTCACAGGCACATATAATAGCTCTGCAACATTTGTGTATGGAAA
GCAAGTGTGGTACACCACAAACTCTTGCAGTCCATGTACAGTCGGTAACG
CTCGGTTCAAGTGTTTCACGGCAAGACCAGATACCCTGAACATGTTTGCT
GACTAGTATGCAGAAAAAAGTACATGTCATTTATGCACATACAGTATGCT
TCATACAGTGCGCTCGCATGCTTGTTTCAACCAGCCTCAAAAGCTTCAAC
TTTCAGCACCACAAGTTCAGTTTTATCGGTGGGGCTGAGTATGGTGAGAG
CTCGTGTAGGGACAGTTGGAACATGCATCAGACTGATCTCACCTACACTT
TTGATCAGGAGCCTGATTTATTTGCACTTTACGAAAATCTAGCGAGCGTC
GTACCGGCGCCATTTAGGGTCAGCCTCTGAGAAATACTTTTTTCGACAGG
CCCAGGTCCAGGAACTTCAAGTCTTGACAAAAGTTCAAGTTTAAGCACAA
AGGCTTAGTATGAGCAGTACTTGTGCAGGGACAGTTTGAACCTGCATCAG
ACTGATCTCACCTACACTGTTGATGTTGAGCCATGATTATTGGGCATTCA
AAGTAACTTCAAGTATACACCTAAGTTCAAGTGTGGGCCTCAAGGCTTGG
TATGGTGAGAGCTCGTGTAGGGACAGTTGGAACATGCATCAGACTGATCT
CACCTACACTTTTGATCAGGAGCCTGATTTATTTGCACTTTACGAAAATC
TAGCGAGCGTCGTACCGGCGCCATTTAGGGTCAGCCTCTGAGAAATACTT
TTTTCGACAGGCCCAGGTCCAGGAACTTCAAGTCTTGACAAAAGTTCAAG
TCTAAGCACAAAGGCTTAGTATGAGCAGCACTCATGTAGGGACACTTTGA
ATCTGCATCACCTACACTGTTGATGTTGAGCCATGATTGTTGGGCATTCA
AAGTAACTTCAAGTATACACTCAAGTTCAAGTGTGGGCCTCAAGGCTTGG
TATGGCGACTTCTCATGTAGGCAAGGGTTGAACCTGCATCAGACTGATCT
CACCTACACTTTCGATCAGCAGCCTGATTTCTTTGCAGTTTACGAAAATC
TAGCGAGCGTCGTACCGGCGCCATTTAGGGTCAGCCTCTGAGAAATACTT
TTTTCGACAGGCCCAGGTCCAGGAACTTCAAGTCTTGACAAAAGTTCAAG
TTTAAGCACAAAGGCTTAGTATGAGCAGCACTTGTGCAGGAACAGTTTGA
ACCTGCATCAGACTGATCTCACCTACACTGTTGATGTTGAGCCATGATTG
TTGGGCATTCAAAGTAACTTCAAGTATACACCTAAGTTCAAGTGTGGGCC
TCAAGGCTTGGTATGGCGACTTCTCATGTAGGTAAGGGTCGAACCTGCAT
CAGACTGATCTCACCTACACTTTCGATCAGCAGCCTGAATTATTTGCACT
TTACGAAAATCTAGCGAGCGTCGTACCGGCGCCATTTAGGGTCAGCCTCT
GAGAAATACTTTTTTCGACAGGCCCAGACCCAGGAACTTCAAGTTCACAC
ACAAGTTCAAGTCCAAGCACAAAGGCTTAGTATGGTGAGTTCGCATATAG
AGCACCGTTGAACTTACATTAGACTGATTTCACCTACACTTTACTTCATG
GATCATAATCAACAACACCAGCACAGTGCAAGTGCTCTCACCATGAACAA
CCTGCTGTTTTGCTTGCGGTCATGATCATCATACCACATTTTCTTTCTTG
ACAATACATTACACAACAAGCTGCCCATGGTAGCGATCACGGCTGAATGC
ACAAGAGCTTTGCGGGAAGGTGACTTGCCTACACTAGAGCGCTGCATAAG
TGAGGGGCTGCCGCTGGACAAAGACCTCATCATGCAGGCCTGCAAATACG
GCCAGCTGAACGTTGTCAAGTGGCTGCGGGGACGCGGCTGCCCGTGGGAC
GGCAACCAAGTCCTGTTGTGCGCTACCAAGGTCCCGAACATTGACATGGC
CAAGTGGGTGCGAGCCCAGGGGTGCAATTGGAATGACGGCCTAGATGGAT
TTGAGTCGTATGTTGCCGCCATCCGGAGGGGGGACTGGGAGATGTTCACA
TGGCTACATGCTGAAGATTGCCCTGTTAAGGATTCGCTGAGGGGTGATCT
CACCTTTGCAGCCATTGAGATGGGTGACGTAGAAGTTGTCAAATGGCTGC
GCAGTGTGGGTTACACACCTGACGCAAGTTGCAGTGGGATAGCGGCGGAG
CGCAATGACCTGCCCATGCTGAAGTACCTACACGAGAGTGGTGTACCTTG
GGATGAATACACTGCGGTCACGGCGCTCGAAGCTGGCAGCCACGAGTGCT
TGGAGTACCTG

Coding sequence (CDS) from alignment at Contig_18:1057787..1062797+

>mRNA_1439 ID=mRNA_1439|Name=jgi.p|Trimin1|161967|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=918bp|location=Sequence derived from alignment at Contig_18:1057787..1062797+ (Tribonema minus UTEX_B_3156 )
ATGATCGACATACCAGACTTTGTGTCTTTTAAGGCGGCGCAGCAGGGGAG
GGTGGATGTGTTGAGGTGGTTGCACGACTCCGGCAGCATGTCCATTGCCG
ACGACATCTTTGAGACAGCAGCGAAAGCAGGACATGTAGATGTTGTGGCG
TGGGGTCTCGAGAGTGGCTATGGGGTTCGCTCTGGGGTGCTCGAGGCCGC
CGCTGCCGAGGGGCACTTTCACATACTCAAGTGGGCACACGCGGCCGGTG
TGCCATTCACAGAGTGGGTGCTGCGCGATGCGATATACTGCGGCAAGCTC
AACATCATCAAGTGGCTGTGCAAGCACAAGTGTTTATGGTCGATCACGGC
TGAATGCACAAGAGCTTTGCGGGAAGGTGACTTGCCTACACTAGAGCGCT
GCATAAGTGAGGGGCTGCCGCTGGACAAAGACCTCATCATGCAGGCCTGC
AAATACGGCCAGCTGAACGTTGTCAAGTGGCTGCGGGGACGCGGCTGCCC
GTGGGACGGCAACCAAGTCCTGTTGTGCGCTACCAAGGTCCCGAACATTG
ACATGGCCAAGTGGGTGCGAGCCCAGGGGTGCAATTGGAATGACGGCCTA
GATGGATTTGAGTCGTATGTTGCCGCCATCCGGAGGGGGGACTGGGAGAT
GTTCACATGGCTACATGCTGAAGATTGCCCTGTTAAGGATTCGCTGAGGG
GTGATCTCACCTTTGCAGCCATTGAGATGGGTGACGTAGAAGTTGTCAAA
TGGCTGCGCAGTGTGGGTTACACACCTGACGCAAGTTGCAGTGGGATAGC
GGCGGAGCGCAATGACCTGCCCATGCTGAAGTACCTACACGAGAGTGGTG
TACCTTGGGATGAATACACTGCGGTCACGGCGCTCGAAGCTGGCAGCCAC
GAGTGCTTGGAGTACCTG