Trimin1|161967|e_gw1.18.87.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|161967
Unique Name	Trimin1\|161967\|e_gw1.18.87.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	306

Homology

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BLAST of jgi.p|Trimin1|161967 vs. uniprot
Match: A0A835Z860_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z860_9STRA)

HSP 1 Score: 472 bits (1215), Expect = 4.360e-166
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0

Query:    1 MIDIPDFVSFKAAQQGRVDVLRWLHDSGSMSIADDIFETXXXXXXXXXXXXGLESGYGVRSGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKHKCLWSITAECTRALREGDLPTLERCISEGLPLDKDLIMQACKYGQLNVVKWLRGRGCPWDGNQVLLCATKVXXXXXXXXXXXXXXXXNDGLDGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTFAAIEMGDVEVVKWLRSVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSHECLEYL 306
            MIDIPDFVSFKAAQQGRVDVLRWLHDSGSMSIADDIFETXXXXXXXXXXXXGLESGYGVRSGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKHKCLWSITAECTRALREGDLPTLERCISEGLPLDKDLIMQACKYGQLNVVKWLRGRGCPWDGNQVLLCATKVXXXXXXXXXXXXXXXXNDGLDGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTFAAIEMGDVEVVKWLRSVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSHECLEYL
Sbjct:    1 MIDIPDFVSFKAAQQGRVDVLRWLHDSGSMSIADDIFETXXXXXXXXXXXXGLESGYGVRSGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKHKCLWSITAECTRALREGDLPTLERCISEGLPLDKDLIMQACKYGQLNVVKWLRGRGCPWDGNQVLLCATKVXXXXXXXXXXXXXXXXNDGLDGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTFAAIEMGDVEVVKWLRSVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSHECLEYL 306

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BLAST of jgi.p|Trimin1|161967 vs. uniprot
Match: A0A835Z1R7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1R7_9STRA)

HSP 1 Score: 347 bits (891), Expect = 1.690e-118
Identity = 176/193 (91.19%), Postives = 179/193 (92.75%), Query Frame = 0

Query:  114 SITAECTRALREGDLPTLERCISEGLPLDKDLIMQACKYGQLNVVKWLRGRGCPWDGNQVLLCATKVXXXXXXXXXXXXXXXXNDGLDGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTFAAIEMGDVEVVKWLRSVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSHECLEYL 306
            +ITAECTRAL+EGDLP LERCISEGLPLDKDLIMQACKYGQLNVVK LRGRGCPWDGN+VLLCATKV      XXXXXXXX   DGLDGFESYVAAIRRGD EMFTWLHAEDCPVKDSLRGDLTFAAIE GDVEVVKWL SVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSHECLEYL
Sbjct:    3 AITAECTRALQEGDLPALERCISEGLPLDKDLIMQACKYGQLNVVKRLRGRGCPWDGNKVLLCATKVPNIDMAXXXXXXXXNWTDGLDGFESYVAAIRRGDREMFTWLHAEDCPVKDSLRGDLTFAAIETGDVEVVKWLSSVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSHECLEYL 195

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BLAST of jgi.p|Trimin1|161967 vs. uniprot
Match: A0A2J7ZW18_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZW18_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 1.480e-5
Identity = 35/116 (30.17%), Postives = 52/116 (44.83%), Query Frame = 0

Query:  123 LREGDLPTLERCISEGLPLDKDLIMQACKYGQLNVVKWLRGRGCPWDGNQVLLCATKVXXXXXXXXXXXXXXXXNDGLDGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTF 238
            L E  L +L++C+         L+ +A + G + ++ WLR RGCPWD + +  CA +                  DG  G + Y+  +R GDW M   L    CP +   RG  TF
Sbjct: 2327 LLEQQLVSLQQCLP--------LLPEAAQSGSMELLAWLRDRGCPWDEDSIY-CAAEAGSEDPGGP---------DGQGG-DPYLRPVRHGDWAMLACLRRVGCPWRPLNRGGGTF 2423

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BLAST of jgi.p|Trimin1|161967 vs. uniprot
Match: A0A2J8A5H4_9CHLO (Ankyrin repeat domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A5H4_9CHLO)

HSP 1 Score: 57.4 bits (137), Expect = 1.950e-5
Identity = 44/168 (26.19%), Postives = 64/168 (38.10%), Query Frame = 0

Query:  122 ALREGDLPTLERCISEGLPLDKDLI-------MQACKYGQLNVVKWLRGRGCPWDGNQVLLCATKVXXXXXXXXXXXXXXXXNDGLDGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTFAAIEMGDVEVVKWLRSVGYTPDASCS-GIAAERNDLPMLKYLHE 281
            A R G LP +       L   + L+         A + G + ++ WLR RGC WD   ++  A                     G  G + Y+ A  +GDW     LH   CP + S  G    +A   G V V++ L  +G   D   + G A E  D  +  +L E
Sbjct: 1990 AARAGHLPVMSWLYDTQLVAPEWLVENGTGMLTDAARLGSVEMLAWLRERGCVWDDRILIAAAEAGSQEAIEWLVAQGYPTEEPGGAGDDPYIPAALQGDWATLACLHRLGCPWQPS--GVAFTSAARWGQVPVLRRLLELGCPVDWQAALGAAEESGDASVWAWLEE 2155

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|161967 vs. uniprot

BLAST of jgi.p|Trimin1|161967 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A835Z860_9STRA	4.360e-166	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835Z1R7_9STRA	1.690e-118	91.19	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A2J7ZW18_9CHLO	1.480e-5	30.17	Uncharacterized protein n=1 Tax=Tetrabaena sociali...	[more]
A0A2J8A5H4_9CHLO	1.950e-5	26.19	Ankyrin repeat domain-containing protein n=1 Tax=T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 8..306 e-value: 9.2E-25 score: 89.0
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 12..283
None	No IPR available	PANTHER	PTHR46586:SF3	ANKYRIN REPEAT-CONTAINING PROTEIN	coord: 208..306 coord: 11..196
None	No IPR available	PANTHER	PTHR46586	ANKYRIN REPEAT-CONTAINING PROTEIN	coord: 11..196
None	No IPR available	PANTHER	PTHR46586	ANKYRIN REPEAT-CONTAINING PROTEIN	coord: 208..306

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_18	contig	Contig_18:1057787..1062797 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|161967	mRNA_1439	Tribonema minus UTEX_B_3156	mRNA	Contig_18 1057787..1062797 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|161967|e_gw1.18.87.1 ID=Trimin1|161967|e_gw1.18.87.1|Name=jgi.p|Trimin1|161967|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=306bp
MIDIPDFVSFKAAQQGRVDVLRWLHDSGSMSIADDIFETAAKAGHVDVVA
WGLESGYGVRSGVLEAAAAEGHFHILKWAHAAGVPFTEWVLRDAIYCGKL
NIIKWLCKHKCLWSITAECTRALREGDLPTLERCISEGLPLDKDLIMQAC
KYGQLNVVKWLRGRGCPWDGNQVLLCATKVPNIDMAKWVRAQGCNWNDGL
DGFESYVAAIRRGDWEMFTWLHAEDCPVKDSLRGDLTFAAIEMGDVEVVK
WLRSVGYTPDASCSGIAAERNDLPMLKYLHESGVPWDEYTAVTALEAGSH
ECLEYL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf