mRNA_1427 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|161892 vs. uniprot
Match: A0A836CFV4_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV4_9STRA) HSP 1 Score: 756 bits (1951), Expect = 2.520e-275 Identity = 373/392 (95.15%), Postives = 380/392 (96.94%), Query Frame = 1 Query: 1 MPDLYTILGVERDAEIVVIKKAYRKLALQHHPDKNGCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSPNPPPDVFQQFFGGGFPNSSNGFPGFFATAAAGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGMGVQHSMRAIAPGLMQRMQSMCPMCSGKGVCVDGDKXXXXXXGARVIADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSAAGEVTKPNTIKVLKDAGLPPCPTSQDKEMGHMIITFAVAFPDRLANMDELLRHLPPRPEHKRGGELEVELVDAHGISEDDLRSEQKEQQATTCQQS 1176 MPDLYTILGVE+DAEI+VIKKAYRKLALQHHPDK+GCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSPNPPPDVFQQFFGGGF NSSNGFPGFFATA GGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAG+GVQHSMRAIAPGLMQRMQSMCPMC GKGVCVDGDKXXXXXXGARV+ADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSA GEVTKPNTIKVLKDAGLP CPT QDKEMGHMIITFAVAFPDRL N DELLR+LPPRP HKR GELEVEL DAHGISEDD+RSEQKEQQATTCQQS Sbjct: 1 MPDLYTILGVEKDAEIIVIKKAYRKLALQHHPDKSGCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSPNPPPDVFQQFFGGGFSNSSNGFPGFFATATGGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGIGVQHSMRAIAPGLMQRMQSMCPMCGGKGVCVDGDKXXXXXXGARVVADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSAEGEVTKPNTIKVLKDAGLPACPTGQDKEMGHMIITFAVAFPDRLDNADELLRYLPPRPVHKRAGELEVELNDAHGISEDDIRSEQKEQQATTCQQS 392
BLAST of jgi.p|Trimin1|161892 vs. uniprot
Match: A0A836CPW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPW3_9STRA) HSP 1 Score: 608 bits (1568), Expect = 5.980e-217 Identity = 292/395 (73.92%), Postives = 336/395 (85.06%), Query Frame = 1 Query: 1 MPDLYTILGVERDAEIVVIKKAYRKLALQHHPDKNGCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSPNPPP-DVFQQFFGGGFPNSS-NGFPGFFAT-AAAGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGMGVQHSMRAIAPGLMQRMQSMCPMCSGKGVCVDGDKXXXXXXGARVIADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSAAGEVTKPNTIKVLKDAGLPPCPTSQDKEMGHMIITFAVAFPDRLANMDELLRHLPPRPEHKRGGELEVELVDAHGISEDDLRSEQKEQQATTCQQS 1176 MPDLY +LGV + A+ IKKAYRKLAL HHPDKNGCP+KFK ++HAY +LSDPE+R++YD+FGE+S NF+P PPP D+FQQFFGGGF ++ NGFP FF AA+G T DI HPLRVTLDDI+RGKTFRMCVNR+IVCRSCDGTGAP G +RKCVGCAG+G+QHSMR IAPGLMQRMQSMCP+C G+GVCVDGDK GARVI DKQT+DVHMPPGTADQHRFVFRNLADECPGK+ GNV+FVVQTKEH VYKRH QNLIMRK+L++TESLCGFEF++PHINGA VWVRSA +VTKPNTIKV++DAGLPPCP +QD MGHMIITF VAFPD L N +ELL+ LPPRP RG LEVELVDAHG++E+D+R E+K+ ATTCQQS Sbjct: 1 MPDLYAVLGVVKGADAASIKKAYRKLALLHHPDKNGCPDKFKGVAHAYGILSDPERREMYDRFGEESLNSNFNPQPPPADIFQQFFGGGFSAANMNGFPSFFTPGAASGATTTSDIIHPLRVTLDDIYRGKTFRMCVNRSIVCRSCDGTGAPAGHSRKCVGCAGVGMQHSMRPIAPGLMQRMQSMCPVCKGRGVCVDGDKTCDQCAGARVITDKQTVDVHMPPGTADQHRFVFRNLADECPGKATGNVIFVVQTKEHAVYKRHSQNLIMRKSLTVTESLCGFEFAIPHINGAVVWVRSAPRQVTKPNTIKVVRDAGLPPCPAAQDDSMGHMIITFTVAFPDELDNTEELLKWLPPRPSQARGCALEVELVDAHGVTEEDIRDEKKDH-ATTCQQS 394
BLAST of jgi.p|Trimin1|161892 vs. uniprot
Match: A0A836CEC5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEC5_9STRA) HSP 1 Score: 344 bits (882), Expect = 7.670e-103 Identity = 164/197 (83.25%), Postives = 175/197 (88.83%), Query Frame = 1 Query: 85 QHHPDKNGCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSPNPPPDVFQQFFGGGFPNSS-NGFPGFFATAAAGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGMGVQHSMRAIAPGLMQRMQSMCPMCSGKGVCVDGDKXXXXXXGARVIADKQTIDVHMPPGTAD 672 +HHPDK+GCP+KFKSI+HAYEVLSDPE+RKLYDQFG+DSFKPNFSP+PPPD FQ FGGGF N + GFPGFFATAA GGNATPDIFHPLRV+LDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGMGVQ SMR IAPGLMQRMQ MCP+CSGKGVCVD D GARVIADKQTIDVHMP T + Sbjct: 48 KHHPDKSGCPKKFKSIAHAYEVLSDPERRKLYDQFGDDSFKPNFSPHPPPDGFQHLFGGGFHNGNPGGFPGFFATAAGGGNATPDIFHPLRVSLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGMGVQRSMRGIAPGLMQRMQRMCPICSGKGVCVDSDNKCEQCAGARVIADKQTIDVHMPAATIE 244
BLAST of jgi.p|Trimin1|161892 vs. uniprot
Match: A0A835Z619_9STRA (Putative chaperone protein dnaJ n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z619_9STRA) HSP 1 Score: 303 bits (776), Expect = 3.410e-97 Identity = 159/361 (44.04%), Postives = 218/361 (60.39%), Query Frame = 1 Query: 10 LYTILGVERDAEIVVIKKAYRKLALQHHPDKNGCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSPNPP------PDVFQQFFGGGFPNSSNGFPGFFATAAAGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGMGVQHSMRAIAPGLMQRMQSMCPMCSGKGVCVDGDKXXXXXXGARVIADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSAAGEVTKPNTIKVLKDAGLPPCPTSQDKE--MGHMIITFAVAFPDRLANMDELLRH--LPPRP 1062 LY +LGV DA+ IKKAYRKLAL HPDKNG PEKFK ++ AYEVL DPEKR YD+FG++S K F PP PD+F FFG G +TPDI HPLRV+L+D++RG+ F+MC++RN+ C C G+G GQ C C G GV H MRA+ PG+MQRMQSMCP C G GV G + + DKQ ++V++ PGT D H+F+F+ +ADE P K+ G+VVFV+QT +H + R G +L++ K LS+ +SL GF FS H++G ++ + +++ +T+ KV+K AG+P +DK G + + F V +P L+ + LPP P Sbjct: 3 LYAVLGVATDADADTIKKAYRKLALVLHPDKNGDPEKFKEVNEAYEVLRDPEKRSSYDRFGDESLKAGFQQQPPMPHGFPPDIFAHFFG----------------QFGGPQSTPDIVHPLRVSLEDLYRGRQFKMCISRNVTCGDCKGSGCKGGQGHPCGICNGQGVHHHMRAVGPGIMQRMQSMCPACKGAGVL--NVNKCGRCEGKKTVGDKQNVEVNVVPGTEDGHKFIFQGMADEQPSKATGSVVFVIQTTQHERFTRKGADLVLEKKLSLRQSLSGFRFSQKHVDGTSIVLENSS--ITRHKEAKVIKGAGMP----HKDKPGMRGDLYVIFLVEYPKSLSKEQQAQLEIILPPEP 339
BLAST of jgi.p|Trimin1|161892 vs. uniprot
Match: A0A835ZF72_9STRA (Heat shock protein 40 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF72_9STRA) HSP 1 Score: 281 bits (718), Expect = 1.060e-87 Identity = 146/339 (43.07%), Postives = 207/339 (61.06%), Query Frame = 1 Query: 7 DLYTILGVERDAEIVVIKKAYRKLALQHHPDKNGCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSP-NPPPDVFQQFFGGGFPNSSNGFPGFFATAAAGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGMGVQHSMRAIAPGLMQRMQSMCPMCSGKGVCVDGDKXXXXXXGARVIADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSAAGEVTKPNTIKVLKDAGLPPCPTSQDKEMGHMIITFAVAFPDRL 1020 + Y +LGV +DA+ IKKAYRKLAL++HPDK G P+KFK IS AY+VLSD +KRK+YDQ+G+D P + P D+F FFGGG S G ++ HPLRV+L+D++ GKT R+ +NRN +C +C G G G R C C G GVQ R I PG++Q+MQ+ C CSG+G ++ G +V+ +++ ++VH+ PG + + F ADE PG PG+VVFV+Q+K H ++R G +LIM K LS+ ESLCGF+F V H++G + +RSA G+VTK ++V+ G+P K G + + F V FP+ L Sbjct: 33 EYYKVLGVPKDADDNTIKKAYRKLALKNHPDKGGDPDKFKEISMAYDVLSDAQKRKMYDQYGKDGVNEEGGPGHTPDDIFSMFFGGGGRRQS------------GPRRGENLVHPLRVSLEDLYNGKTCRLAINRNRLCSACAGRGGKEGAERPCGACNGHGVQIQYRQIGPGMVQKMQATCSDCSGEGKVINPRDRCRECQGKKVVKERKVLEVHVTPGMKNGEKITFHEEADETPGMLPGDVVFVIQSKPHDTFQRKGADLIMEKKLSLAESLCGFDFVVQHMDGRALRLRSAPGKVTKHEHLQVIPHEGMPHAGNPYVK--GRLFVLFKVVFPETL 357
BLAST of jgi.p|Trimin1|161892 vs. uniprot
Match: A0A6G0WI92_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WI92_9STRA) HSP 1 Score: 279 bits (714), Expect = 3.330e-87 Identity = 147/336 (43.75%), Postives = 205/336 (61.01%), Query Frame = 1 Query: 13 YTILGVERDAEIVVIKKAYRKLALQHHPDKNGCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSPNPPPDVFQQFFGGGFPNSSNGFPGFFATAAAGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGMGVQHSMRAIAPGLMQRMQSMCPMCSGKGVCVDGDKXXXXXXGARVIADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSAAGEVTKPNTIKVLKDAGLPPCPTSQDKEMGHMIITFAVAFPDRL 1020 Y LGV + A IKKAYRKLAL++HPDK G PE FK+I+ AYEVLSDPEKR+LYDQ+GE+ + +P D+F Q FGG S G A G D+ HPL+V+L+D++ GKT ++ VNR+++C SC G G P G C C G G++ MR I PG++Q++QS+CP C G+G + G +V +++ ++VH+ G + R F AD+ PG PG+++FVVQ KEH V++R G NLIM K +++ ESLCGFE V H++G + ++S AGEV KPN K + G+P K G ++I F V FP +L Sbjct: 32 YETLGVPKTASAADIKKAYRKLALKNHPDKGGDPELFKNITVAYEVLSDPEKRELYDQYGEEGLQQGGGGHPGADIFSQMFGGRGGQRSRG-------PARG----EDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGSCFGRGGPEGAETTCNTCNGRGMRIQMRQIGPGMVQQVQSVCPDCRGQGKTIRESDKCKVCKGNKVTKERKVLEVHIEKGMRNGQRITFSGEADQAPGTIPGDIIFVVQEKEHAVFQRKGGNLIMEKKITLVESLCGFETIVEHLDGRQLHIKSIAGEVIKPNQFKAVNGEGMPQHGNPFVK--GQLVILFKVEFPTKL 354
BLAST of jgi.p|Trimin1|161892 vs. uniprot
Match: A0A6I9TW02_SESIN (dnaJ protein homolog n=7 Tax=Lamiales TaxID=4143 RepID=A0A6I9TW02_SESIN) HSP 1 Score: 278 bits (712), Expect = 6.650e-87 Identity = 151/390 (38.72%), Postives = 234/390 (60.00%), Query Frame = 1 Query: 13 YTILGVERDAEIVVIKKAYRKLALQHHPDKNGCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSP----NPPPDVFQQFFGGGFPNSSNGFPGFFATAAAGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGMGVQHSMRAIAPGLMQRMQSMCPMCSGKGVCVDGDKXXXXXXGARVIADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSAAGEVTKPNTIKVLKDAGLPPCPTSQDKEMGHMIITFAVAFPDRLA--NMDELLRHLPPRPEHKRGG-EL-EVELVDAHGIS-EDDLRSEQKEQQ 1155 Y ILGV + A +KKAY+K A+++HPDK G PEKFK ++HAYEVLSDPEKR++YDQ+GED+ K + P D+F FFGG + F G ++ D+ HPL+V+L+D++ G T ++ ++RN++C C G G+ G + KC GC G G++ ++R + PG++Q+MQ C C G G ++ G +V+ +K+ ++VH+ G + + F ADE P G++VFV+Q KEHP +KR G++L + TLS+TE+LCGF+F + H++G + ++S GEV KP++ K + D G+P K G + I F V FPD L +D L + LPP+ + + EL E E H ++ E+++R +Q + Q Sbjct: 15 YDILGVPKTASPDDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGMHDPFDIFSSFFGG------SPFGGXXSSRGRRQRRGEDVVHPLKVSLEDLYLGTTKKLSLSRNVICSKCSGKGSKSGASMKCSGCQGSGMKVTIRQLGPGMIQQMQHPCNECKGTGETINDRDRCPQCKGEKVVQEKKVLEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFILSHLDGRQLLIKSQPGEVVKPDSYKAINDEGMPMYQRPFMK--GKLYIHFNVDFPDSLTADQVDALAKILPPKAQSQLTDMELDECEETTLHDVNIEEEMRRKQTQHQ 396
BLAST of jgi.p|Trimin1|161892 vs. uniprot
Match: UPI000901935C (dnaJ protein homolog n=2 Tax=Ipomoea TaxID=4119 RepID=UPI000901935C) HSP 1 Score: 276 bits (705), Expect = 7.910e-86 Identity = 147/389 (37.79%), Postives = 233/389 (59.90%), Query Frame = 1 Query: 13 YTILGVERDAEIVVIKKAYRKLALQHHPDKNGCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSP----NPPPDVFQQFFGGGFPNSSNGFPGFFATAAAGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGMGVQHSMRAIAPGLMQRMQSMCPMCSGKGVCVDGDKXXXXXXGARVIADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSAAGEVTKPNTIKVLKDAGLPPCPTSQDKEM-GHMIITFAVAFPDRLA--NMDELLRHLPPRPEHKRGGELEVELVDAHGISEDDLRSEQKEQQA 1158 Y ILGV ++A + IKKAYRK A+++HPDK G PEKFK ++ AYEVLSDPEKR++YD++GED+ K + P D+FQ FFGGG P F G D+ HPL+V+L++++ G T ++ ++RN++C C+G G+ G + KC GC G G++ ++R + P ++Q+MQ C C G G ++ G +V+ +K+ ++VH+ G + + F ADE P G++VFV+Q KEHP +KR G +L + TL++TE+LCGF+F + H++G + ++S GEV KP+ K + D G+P T Q M G + I F V FPD L+ + L LPPR + + ++E++ + + + ++ E + ++A Sbjct: 15 YDILGVSKNAGVDEIKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDEYGEDALKEGMGGGAGMHDPFDIFQSFFGGGNP-----FGGXXXXXXXRQRRGEDVIHPLKVSLEEMYSGTTKKLSLSRNVICSKCNGKGSKSGSSMKCGGCEGSGMKVTIRQLGPSMIQQMQQPCNECKGTGETINDKDRCPQCKGDKVVPEKKVLEVHVEKGMQNGQKITFPGEADEAPDMITGDIVFVLQQKEHPKFKRKGDDLFVDHTLTLTEALCGFQFILTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMP---TYQRPFMKGKLYIHFMVDFPDSLSPEQVKALEAILPPR-QKSQYSDMEIDECEETTLHDVNIEEEMRRKRA 394
BLAST of jgi.p|Trimin1|161892 vs. uniprot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 n=7 Tax=Caryophyllales TaxID=3524 RepID=DNJH_ATRNU) HSP 1 Score: 274 bits (701), Expect = 2.970e-85 Identity = 147/357 (41.18%), Postives = 214/357 (59.94%), Query Frame = 1 Query: 13 YTILGVERDAEIVVIKKAYRKLALQHHPDKNGCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSP----NPPPDVFQQFFGGGFPNSSNGFPGFFATAAAGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGMGVQHSMRAIAPGLMQRMQSMCPMCSGKGVCVDGDKXXXXXXGARVIADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSAAGEVTKPNTIKVLKDAGLPPCPTSQDKEMGHMIITFAVAFPDRLANMDE---LLRHLPPRP 1062 Y ILGV +DA +KKAY+K A+++HPDK G PEKFK ++HAYEVLSDPEKR++YDQ+GED+ K + P D+FQ FFGG + F G ++ D+ HPL+V+L+D+F G T ++ ++RN++C C G G+ G + KC GC G G++ S+R + P ++Q+MQ C C G G ++ G +V+ +K+ ++V + G + F ADE P G++VFV+Q KEHP +KR G++L TLS+TE+LCGF F + H++G + ++S GEV KP+ K ++D G+P K G M I F V FPD L N D+ L LPP+P Sbjct: 15 YEILGVPKDASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGMHDPFDIFQSFFGG------SPFGGVGSSRGRRQRRGEDVVHPLKVSLEDLFTGTTKKLSLSRNVICSKCTGKGSKSGASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVVVEKGMQHGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMK--GKMYIHFTVEFPDSL-NPDQVKSLEAILPPKP 362
BLAST of jgi.p|Trimin1|161892 vs. uniprot
Match: UPI00053C6EBE (dnaJ protein homolog n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C6EBE) HSP 1 Score: 273 bits (697), Expect = 1.250e-84 Identity = 147/385 (38.18%), Postives = 228/385 (59.22%), Query Frame = 1 Query: 13 YTILGVERDAEIVVIKKAYRKLALQHHPDKNGCPEKFKSISHAYEVLSDPEKRKLYDQFGEDSFKPNFSPNPPP----DVFQQFFGGGFPNSSNGFPGFFATAAAGGNATPDIFHPLRVTLDDIFRGKTFRMCVNRNIVCRSCDGTGAPPGQARKCVGCAGMGVQHSMRAIAPGLMQRMQSMCPMCSGKGVCVDGDKXXXXXXGARVIADKQTIDVHMPPGTADQHRFVFRNLADECPGKSPGNVVFVVQTKEHPVYKRHGQNLIMRKTLSITESLCGFEFSVPHINGANVWVRSAAGEVTKPNTIKVLKDAGLPPCPTSQDKEM-GHMIITFAVAFPDRLAN--MDELLRHLPPRPEHKRGGELEVELVDAHGISEDDLRSEQK 1146 Y ILGV +DA +KKAY+K A+++HPDK G PEKFK I+ AYEVLSDPEKR++YDQ+GE++ K + P D+F FFGGG SS G D+ HPL+V+L+D++ G T ++ ++RN++C C+G G+ G + KC GC G+G++ ++R + P ++Q+MQ +C C G G +D G +V+ +K+ ++V + G + + F ADE P G+VVFV+Q KEHP +KR G+NL TLS+TE+LCGF+F + H++G + ++S GEV KP++ K + D G+P Q M G + I F V FPD L++ + L LPP + ++E++ + + + ++ E + Sbjct: 17 YEILGVTKDATQEDLKKAYKKAAIKNHPDKGGDPEKFKEIAQAYEVLSDPEKREIYDQYGEEALKEGMGGSGPTIDPFDIFSSFFGGG--GSSRG---------RRERRGEDVVHPLKVSLEDLYLGTTKKLSLSRNVICSKCNGKGSKSGASMKCSGCQGIGMKVTVRHLGPSMIQQMQHVCNECKGTGETIDEKDRCLQCKGEKVVPEKKVLEVFVEKGMQNGQKITFPGAADEAPDTVTGDVVFVIQQKEHPKFKRKGENLFYEHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDSFKAIDDEGMP---VHQRPFMKGKLYIHFMVEFPDSLSSDQVKALEAILPPPRTSSQFTDMELDECEETTLHDVNIEEEMR 387 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161892 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1427 ID=mRNA_1427|Name=jgi.p|Trimin1|161892|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1179bp|location=Sequence derived from alignment at Contig_18:1023892..1025070+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCCCGACCTGTACACCATTCTCGGTGTCGAAAGAGATGCAGAGATCGTback to top protein sequence of jgi.p|Trimin1|161892 >Trimin1|161892|e_gw1.18.99.1 ID=Trimin1|161892|e_gw1.18.99.1|Name=jgi.p|Trimin1|161892|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=393bp MPDLYTILGVERDAEIVVIKKAYRKLALQHHPDKNGCPEKFKSISHAYEVback to top mRNA from alignment at Contig_18:1023892..1025070+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1427 ID=mRNA_1427|Name=jgi.p|Trimin1|161892|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1179bp|location=Sequence derived from alignment at Contig_18:1023892..1025070+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_18:1023892..1025070+ >mRNA_1427 ID=mRNA_1427|Name=jgi.p|Trimin1|161892|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1179bp|location=Sequence derived from alignment at Contig_18:1023892..1025070+ (Tribonema minus UTEX_B_3156 )back to top |