mRNA_1404 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|161849 vs. uniprot
Match: A0A835YYA9_9STRA (Putative nuclease n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA9_9STRA) HSP 1 Score: 284 bits (727), Expect = 6.390e-97 Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 1 Query: 1 MSRAGSTNWDNVTYDTCDKYLPAHDGDIAKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGMDVTLSQVMLKVPDVCHTYDGGKKSPWLNK 429 +SRAGST WDNVTYDTCDKYLPAHDGD+AKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEG +VTLSQVMLKVPDVCH YDGGKKSPWLNK Sbjct: 10 ISRAGSTTWDNVTYDTCDKYLPAHDGDVAKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGTNVTLSQVMLKVPDVCHAYDGGKKSPWLNK 152
BLAST of jgi.p|Trimin1|161849 vs. uniprot
Match: A0A836CPX4_9STRA (Putative nuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPX4_9STRA) HSP 1 Score: 213 bits (542), Expect = 9.760e-69 Identity = 100/131 (76.34%), Postives = 114/131 (87.02%), Query Frame = 1 Query: 22 NWDNVTYDTCDKYLPAHDGDIAKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGMDVTLSQVMLKVPDVCHTYDGGKKS 414 +W +VTYD+C+KYLPAHDGDIAKV+RVIDGDTVHLALK+NG F R+ CRL GID AE+ SKD EK L E+AKS+LA ACDNKLVTLSNV LEKYGRLLADLTV G DVTLSQVML +P++CH YDGGKK+ Sbjct: 18 DWQDVTYDSCEKYLPAHDGDIAKVIRVIDGDTVHLALKNNGNFVRLSCRLQGIDTAEMRSKDSDEKDLAERAKSVLAGACDNKLVTLSNVSLEKYGRLLADLTVVGSDVTLSQVMLNLPELCHAYDGGKKT 148
BLAST of jgi.p|Trimin1|161849 vs. uniprot
Match: A0A835Z7E9_9STRA (FirrV-1-P2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E9_9STRA) HSP 1 Score: 125 bits (313), Expect = 3.650e-34 Identity = 62/134 (46.27%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 19 TNWDNVTYDTCDKYLPAHDGDIAKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGMDVTLSQVMLKVPDVCHTYDGGKKSPW 420 T + +TY++C ++L +GD K+V+V DGDTV A NG + CRL GID ELHS + HEKAL KA+ L+A NK+VT+ + LEKYGR+L DL V+G M+ + DVC+ YDGG K W Sbjct: 2 TELNKLTYESCKQFLALEEGDKVKIVKVYDGDTVTAAFIRNGIPVKFQCRLEGIDTPELHSSEPHEKALAVKARDALSALTLNKVVTVKSPSLEKYGRILCDLEVDGKSAC--DEMMALHDVCYAYDGGSKKQW 133
BLAST of jgi.p|Trimin1|161849 vs. uniprot
Match: B5LWN7_9PHYC (Putative nuclease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWN7_9PHYC) HSP 1 Score: 107 bits (266), Expect = 7.060e-27 Identity = 56/127 (44.09%), Postives = 77/127 (60.63%), Query Frame = 1 Query: 49 CDKYLPAHDGDIAKVVRVIDGDTVHLALKSN-GTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGMDVTLSQVMLKVPDVCHTYDGGKKSPWLN 426 C +YLP H+GDI V RV DGDT LA + G R CR+ ID E+ K E+ + AK L +A K VT+ +KYGR+LADL+ E + ++S ML++PD+C +Y GGKK+PWL+ Sbjct: 16 CVRYLPVHEGDIVFVCRVYDGDTCTLAWVDHAGRSVRSSCRIRDIDTPEMRGKSPEERKMASLAKERLQSAILEKFVTVWRPSSDKYGRILADLSTESIR-SVSTYMLEMPDICKSYTGGKKTPWLS 141
BLAST of jgi.p|Trimin1|161849 vs. uniprot
Match: A0A6C0FAJ1_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0FAJ1_9ZZZZ) HSP 1 Score: 93.2 bits (230), Expect = 3.370e-21 Identity = 56/141 (39.72%), Postives = 86/141 (60.99%), Query Frame = 1 Query: 22 NWDNVTYDTCDKYLPAHDGDIAKVVRVIDGDTVHLALKSNGTFT---RIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGMDVTLSQVMLKVPDVCHTYDGGKK-SP--WLN 426 +W +V+Y T + + P AKVV+V DGDT+ +A T + R RL GID E+ +KD EK G+KA+ I+ NK+V +SN+ +KYGR+LAD++++G++VT + + + V Y+GGKK SP WL+ Sbjct: 14 DWSDVSYKTTEVFRPVFSK--AKVVKVYDGDTITVATPLQFTGSPVYRFSVRLRGIDCPEIRTKDADEKVCGQKARKIMLDQVMNKVVDVSNIDYDKYGRILADVSIDGVNVTEALITQNLAVV---YNGGKKNSPENWLD 149
BLAST of jgi.p|Trimin1|161849 vs. uniprot
Match: A0A6C0LVU8_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LVU8_9ZZZZ) HSP 1 Score: 79.3 bits (194), Expect = 7.410e-16 Identity = 47/129 (36.43%), Postives = 73/129 (56.59%), Query Frame = 1 Query: 34 VTYDTCDKYLPAHDGDIAKVVRVIDGDTVHLALK---SNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGMDVTLSQVMLKVPDVCHTYDGGKK 411 + Y ++P G KV++V DGDT+ +A K N + R R++GID E+ K E+EK A+ + + K+V L NV LEKYGR+LAD+ +EG+++ S + ++ +YDGGKK Sbjct: 30 IKYKETIPFIPPVTG--GKVIKVYDGDTITIASKMPWDNSPYYRFSVRINGIDCPEIKGKTENEKQCAILAREHVDHLVNGKIVHLENVSLEKYGRILADVFIEGVNIGQSLLEKRL---AVSYDGGKK 153
BLAST of jgi.p|Trimin1|161849 vs. uniprot
Match: A0A6C0HI73_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HI73_9ZZZZ) HSP 1 Score: 76.6 bits (187), Expect = 7.600e-15 Identity = 48/141 (34.04%), Postives = 76/141 (53.90%), Query Frame = 1 Query: 16 STNWDNVTYDTCDKYLPAHDGDIAKVVRVIDGDTVHLALK---SNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGMDVTLSQVMLKVPDVCHTYDGGKKSP--WL 423 S ++ N++YD ++P KV++V DGDT+ +A + S RI RL+GID E+ + + EK L +K + L NK+V L N EKYGRLLAD+ ++G V +++ M++ + G K P W+ Sbjct: 27 SDDFTNISYDNTVPFVPPVT--YGKVIKVYDGDTITIAARLPYSKSAIYRIAVRLNGIDTPEIKGQTQKEKDLAKKIRDTLQTKLMNKIVQLKNTSSEKYGRLLADVYLDG--VCINEWMVEQGYAVRYHGGTKIRPTEWI 163
BLAST of jgi.p|Trimin1|161849 vs. uniprot
Match: A0A6C0AUH4_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AUH4_9ZZZZ) HSP 1 Score: 73.9 bits (180), Expect = 4.830e-14 Identity = 47/139 (33.81%), Postives = 69/139 (49.64%), Query Frame = 1 Query: 16 STNWDNV----TYDTCDKYLPAHDGDIAKVVRVIDGDTVHLALKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGMDVTLSQVMLKVPDVCHTYDGGKKSPW 420 S WD++ Y C K KVV V DGDTV NG + CRL G+D E+ + ++ EKA G + +L NK+V + L+KYGRLL + ++G++V +Q ++ + YDGG K W Sbjct: 2 SIEWDSIHDAPDYSDCVKGTTVE----GKVVSVYDGDTVKTIFPLNGVLYKWNCRLTGVDTPEIRTSNKKEKAFGYVVRDLLREKILNKVVQVKCDDLDKYGRLLTVIYIDGVNV--NQWLID-NEYAFAYDGGTKRSW 133
BLAST of jgi.p|Trimin1|161849 vs. uniprot
Match: A0A6C0IJ23_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IJ23_9ZZZZ) HSP 1 Score: 73.6 bits (179), Expect = 1.070e-13 Identity = 49/131 (37.40%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 28 DNVTYDTCDKYLPAHDGDIAKVVRVIDGDTVHLALK---SNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGMDVTLSQVMLKVPDVCHTYDGGKK 411 D + YD C +++P + AKVV+V DGDT+ +A K R RL GIDA EL+S + +E+ +++ L N+ V+L NV +EKYGRLLAD+ + V L + Y GGKK Sbjct: 29 DTIKYDDCARFIP--EIRYAKVVKVYDGDTITVACKYPIRGKQLYRFSVRLAGIDAPELNSNNSNERIHANVSRTNLQGLIFNETVSLENVRIEKYGRLLADVYFHDLHVN---AWLLDNEYAIPYYGGKK 154
BLAST of jgi.p|Trimin1|161849 vs. uniprot
Match: A0A6C0CPC4_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CPC4_9ZZZZ) HSP 1 Score: 71.6 bits (174), Expect = 4.840e-13 Identity = 47/130 (36.15%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 34 VTYDTCDKYLPAHDGDIAK--VVRVIDGDTVHLA--LKSNGTFTRIVCRLHGIDAAELHSKDEHEKALGEKAKSILAAACDNKLVTLSNVGLEKYGRLLADLTVEGMDVTLSQVMLKVPDVCHTYDGGKK 411 + +D KY P + +I + V++V DGDT+ + +K++ T + RL+ ID E+ +KD EK + KA+ +A K+VTL NVGL+KYGRLLA + + G S+++ + ++ +YDGG K Sbjct: 12 IPFDENTKY-PTYVPEITRGRVIKVYDGDTITILGRVKNSSTLYKFSVRLNRIDCPEMRTKDLKEKFVATKARDFVAELTLQKIVTLKNVGLDKYGRLLAHVYI-GKRCINSELIER--NLAVSYDGGTK 137 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161849 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1404 ID=mRNA_1404|Name=jgi.p|Trimin1|161849|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=432bp|location=Sequence derived from alignment at Contig_18:955176..955607+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCCCGAGCCGGCAGCACCAATTGGGACAATGTAACGTATGATACGTGback to top protein sequence of jgi.p|Trimin1|161849 >Trimin1|161849|e_gw1.18.299.1 ID=Trimin1|161849|e_gw1.18.299.1|Name=jgi.p|Trimin1|161849|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=144bp MSRAGSTNWDNVTYDTCDKYLPAHDGDIAKVVRVIDGDTVHLALKSNGTFback to top mRNA from alignment at Contig_18:955176..955607+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1404 ID=mRNA_1404|Name=jgi.p|Trimin1|161849|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=432bp|location=Sequence derived from alignment at Contig_18:955176..955607+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_18:955176..955607+ >mRNA_1404 ID=mRNA_1404|Name=jgi.p|Trimin1|161849|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=432bp|location=Sequence derived from alignment at Contig_18:955176..955607+ (Tribonema minus UTEX_B_3156 )back to top |