mRNA_1409 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|161773 vs. uniprot
Match: A0A835Z842_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z842_9STRA) HSP 1 Score: 573 bits (1478), Expect = 7.100e-207 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 Query: 1 MLLKTARTAANHAKPVEIAEDDAPALRTGPLTGRKFHLKRQSFDRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFWTFKLFK 852 MLLKTARTAANHAKPVEIAEDDAPALRTGPLTGRKFHLKRQSFDRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFWTFKLFK Sbjct: 1 MLLKTARTAANHAKPVEIAEDDAPALRTGPLTGRKFHLKRQSFDRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFWTFKLFK 284
BLAST of jgi.p|Trimin1|161773 vs. uniprot
Match: A0A835YYL4_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYL4_9STRA) HSP 1 Score: 498 bits (1283), Expect = 5.010e-177 Identity = 243/259 (93.82%), Postives = 250/259 (96.53%), Query Frame = 1 Query: 76 LRTGPLTGRKFHLKRQSFDRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFWTFKLFK 852 +++ + RKFHLKRQSFDRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEG PA DDSGCVLRDVCKAIKKYHVPDER+EPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESD VAQTGVVPMPQEGEQCLGGHAVDVVGYDD TRTFTLMNSWSTQWGDSGFFTLPYEYVLD +LASDFWTF+LFK Sbjct: 34 IKSTTFSSRKFHLKRQSFDRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGTPAFDDSGCVLRDVCKAIKKYHVPDERYEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDKVAQTGVVPMPQEGEQCLGGHAVDVVGYDDVTRTFTLMNSWSTQWGDSGFFTLPYEYVLDPSLASDFWTFQLFK 292
BLAST of jgi.p|Trimin1|161773 vs. uniprot
Match: A0A836CBQ3_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ3_9STRA) HSP 1 Score: 394 bits (1013), Expect = 1.290e-135 Identity = 191/253 (75.49%), Postives = 216/253 (85.38%), Query Frame = 1 Query: 94 TGRKFHLKRQSFDRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFWTFKLFK 852 TGRK+ L+ Q D RD+VF+S + A +P +VDLR +GFMPPVLDQ AGTCSAHASANALHYLL+REKVADFSPARLYIYYTTRVYVEG PA++DSGCVLRDV KAIK YHVPDE++EPYSD+KIS+RPSAMAVANARLH TL+Y AV QTE LK ALAA +PVMIGIQV+ESFESD VA TG VPMP++GE+CLG HA +G+DDATR F LMNSW +GD GFFTLPYEYVLD NLASDFWTFK+FK Sbjct: 60 TGRKYTLRLQEPDSRDLVFTSTINGADMPLSVDLRTSGFMPPVLDQQSAGTCSAHASANALHYLLKREKVADFSPARLYIYYTTRVYVEGTPATEDSGCVLRDVGKAIKTYHVPDEKYEPYSDKKISQRPSAMAVANARLHTTLKYRAVAQTEHDLKGALAAGFPVMIGIQVYESFESDEVAATGEVPMPEDGEECLGAHATLCIGFDDATRKFKLMNSWGVAFGDKGFFTLPYEYVLDPNLASDFWTFKVFK 312
BLAST of jgi.p|Trimin1|161773 vs. uniprot
Match: A0A836CN22_9STRA (Pept_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN22_9STRA) HSP 1 Score: 324 bits (831), Expect = 2.930e-108 Identity = 159/268 (59.33%), Postives = 205/268 (76.49%), Query Frame = 1 Query: 49 EIAEDDAPALRTGPLTGRKFHLKRQSFDRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFWTFKLFK 852 E+ + D + TG G+++ L +Q D RD F S K +++P AVDLR TGF+PP +DQGQAGTCSAHA+++AL +L+R+EK+ DF P+RL+IY+T+RVYVEG+ S+D+GC LRDV KA+ YHV +ER+ PYSD KI+E P A+AVANARLH T Y AV Q+ ALK ALA+ YPV++GIQV+ESFESD VA+TG VPMP +GEQCLGGHAV VG+ D T+TFTL+NSW QWG +GFFTLPY+Y+ + +LA DFW FK Sbjct: 30 ELEKRDNLPVSTG---GKRYGLVKQKPDDRDFQFVSAAK-SSIPAAVDLRTTGFVPPAMDQGQAGTCSAHAASSALRFLIRKEKLQDFQPSRLFIYFTSRVYVEGVAPSEDTGCALRDVVKALSTYHVCNERYMPYSDTKIAEHPPALAVANARLHTTFMYRAVQQSLSALKSALASGYPVIVGIQVYESFESDDVARTGNVPMPSDGEQCLGGHAVLCVGFQDKTQTFTLLNSWG-QWGQNGFFTLPYDYLTNPDLAFDFWMITGFK 292
BLAST of jgi.p|Trimin1|161773 vs. uniprot
Match: A0A836CNX1_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNX1_9STRA) HSP 1 Score: 318 bits (814), Expect = 1.110e-105 Identity = 161/274 (58.76%), Postives = 203/274 (74.09%), Query Frame = 1 Query: 31 NHAKPVEIAEDDAPALRTG---PLT--GRKFHLKRQSFDRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFWT 837 N A+ + E A L+ G P++ GR++ L +Q D RD F + + +LP AVDLR TG +PPVLDQG AGTCSAHA+A+AL +LLR+EK+ DF P+RL++YY TRVYVEG+ S+DSGC LRDV KAI YHV +ER+ Y KI+E+P A+AVANARLH T Y AV Q+ ALK ALA+ YPV++G QV+ESFES+ VA+TG VPMP EGEQCLGGHA ++GY+DAT+TFTL+NSW WG +GFFTLPY Y+ D+ LA DFWT Sbjct: 16 NAARLKKFVESQAAELQKGGRLPVSSGGRRYGLVKQKPDNRDYQFVAASR-KSLPAAVDLRTTGCVPPVLDQGSAGTCSAHAAASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMTYDPAKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVLVGFQVYESFESEEVARTGGVPMPAEGEQCLGGHACLLIGYNDATQTFTLLNSWGL-WGQNGFFTLPYAYLTDTELACDFWT 287
BLAST of jgi.p|Trimin1|161773 vs. uniprot
Match: A0A836CEQ3_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ3_9STRA) HSP 1 Score: 314 bits (804), Expect = 1.160e-104 Identity = 150/244 (61.48%), Postives = 191/244 (78.28%), Query Frame = 1 Query: 103 KFHLKRQSFDRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFW 834 ++ L +Q D RD F + + +LP AVDLR TG++PPV+DQG AGTCSAHA+A+AL +LLR+EK+ DF P+RL++YY TRVYVEG+ S+DSGC LRDV KAI YHV +ER+ Y D KI+E+P A+AVANARLH T Y AV Q+ ALK ALA+ YPV++GIQV++SFE++ VA+TGVVPMP EGEQCLGGHAV +V ++DATRTFTL NSWS+ WG GFF L Y+Y+ + +LA DFW Sbjct: 10 RYGLVKQKPDDRDYQFVAASR-KSLPAAVDLRTTGYVPPVMDQGSAGTCSAHATASALRFLLRKEKLQDFPPSRLFLYYVTRVYVEGVSPSEDSGCALRDVAKAIATYHVCNERYMEYDDTKIAEQPPALAVANARLHTTFTYRAVQQSLSALKGALASGYPVVVGIQVYDSFETEEVARTGVVPMPAEGEQCLGGHAVYLVAFEDATRTFTLCNSWSSAWGQGGFFKLSYDYLTNPDLACDFW 252
BLAST of jgi.p|Trimin1|161773 vs. uniprot
Match: A0A835ZGP7_9STRA (Pept_C1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGP7_9STRA) HSP 1 Score: 308 bits (789), Expect = 3.930e-103 Identity = 143/208 (68.75%), Postives = 168/208 (80.77%), Query Frame = 1 Query: 229 QGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFWTFKLFK 852 QG+AGTCSAHA+AN LHYLLR+E VADF P+RL+IYYT RVYVEG PA++DSGCVLRDVCKA+ +YH PDE++EPYSD +I++RPSA+AVANAR H L+Y AVPQTE LK ALAA YPVM+GIQV+ FESD VA+TG +P E CLGGHAV + YDD+ R FTLMNSWS+ WG GFFTLPY+Y+LD LA DFW F FK Sbjct: 1 QGRAGTCSAHAAANCLHYLLRKEGVADFPPSRLFIYYTARVYVEGTPATEDSGCVLRDVCKAVARYHAPDEKYEPYSDARIAQRPSALAVANARKHCALQYRAVPQTEADLKGALAAGYPVMVGIQVYAGFESDEVARTGEAQLPGPDEACLGGHAVVLTAYDDSLRRFTLMNSWSSAWGRGGFFTLPYDYLLDPQLAGDFWCFTAFK 208
BLAST of jgi.p|Trimin1|161773 vs. uniprot
Match: A0A836CMZ0_9STRA (Papain cysteine protease family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMZ0_9STRA) HSP 1 Score: 311 bits (796), Expect = 6.000e-103 Identity = 152/267 (56.93%), Postives = 194/267 (72.66%), Query Frame = 1 Query: 49 EIAEDDAPALRTGPLTGRKFHLKRQSFDRRDIVFSSNVKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFWTFKLF 849 E + PA GR++ +Q D RD F ++ + ++P VDLR+TGF+ PVL+QG AGTCSAHA+A AL YLLR+E V DF P+RL++YYTTRV +EGI DSGCVLRDVC+A++K+H +ER+ YSD +I+ERP A+AVANARLH T Y AV QT AL+ ALA YPV++GIQV+++FES+ VA TGVVPMP E+CLGGHAV +V YDD TRTFTL NSW +WG GFF+LPY+Y++D+ LA DFW F Sbjct: 27 EAGDAKKPAHLPASAGGRRYGTIKQKEDSRDYSFVASFR-NSIPQKVDLRSTGFLGPVLNQGSAGTCSAHAAAAALRYLLRKEHVQDFPPSRLFVYYTTRVNIEGISPEIDSGCVLRDVCRALQKFHTCNERYMAYSDTQITERPPALAVANARLHTTFAYRAVEQTLSALRGALATGYPVIVGIQVYQTFESEEVANTGVVPMPSHNEECLGGHAVLLVAYDDETRTFTLQNSWG-EWGQDGFFSLPYDYLIDTGLAGDFWCLTRF 291
BLAST of jgi.p|Trimin1|161773 vs. uniprot
Match: A0A2V8R499_9BACT (Peptidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8R499_9BACT) HSP 1 Score: 224 bits (572), Expect = 1.580e-69 Identity = 121/243 (49.79%), Postives = 161/243 (66.26%), Query Frame = 1 Query: 130 DRRDIVFSSN-VKVATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVAD-FSPARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQK---ISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFWTFK 843 D RD ++S+ V VA LP +VDLR+ PPV DQGQ G+C+ +A A AL + ++ +AD F P+RL+IYY RV +EG S D+G ++RD K++ K P E+ PYSD +++PSA A A+ R H + Y+ +PQ + LK LA+ YP + GI V+ESFES AVA++G VPMP+ E+ LGGHA+ VGYDD R F + NSW WG G+FTLPYEYVLDSNLA DFWT + Sbjct: 16 DHRDKMYSAPFVHVAQLPPSVDLRSG--CPPVYDQGQLGSCTGNAIAGALEFDQMKQGLADVFPPSRLFIYYNERV-MEG-SVSQDAGAMIRDGVKSVNKVGAPHEKLWPYSDANPGPFTKKPSAAAFADGRKHPAVVYQRLPQVDIQLKGCLASGYPFVFGISVYESFESSAVAKSGKVPMPKPKEKMLGGHAILAVGYDDTQRRFIIRNSWGPDWGVKGYFTLPYEYVLDSNLADDFWTIR 254
BLAST of jgi.p|Trimin1|161773 vs. uniprot
Match: A0A0M4QQF9_9MICC (Peptidase C1 n=3 Tax=Arthrobacter TaxID=1663 RepID=A0A0M4QQF9_9MICC) HSP 1 Score: 209 bits (533), Expect = 1.100e-63 Identity = 116/240 (48.33%), Postives = 149/240 (62.08%), Query Frame = 1 Query: 130 DRRDIVFSSNVKV-ATLPGAVDLRNTGFMPPVLDQGQAGTCSAHASANALHYLLRREKVADFS-PARLYIYYTTRVYVEGIPASDDSGCVLRDVCKAIKKYHVPDERFEPYSDQKISERPSAMAVANARLHATLRYEAVPQTEQALKRALAARYPVMIGIQVFESFESDAVAQTGVVPMPQEGEQCLGGHAVDVVGYDDATRTFTLMNSWSTQWGDSGFFTLPYEYVLDSNLASDFWTFK 843 D+RD F++ + V A LP AVDL T PPV DQGQ G+C+ + A + + +EK+ D S P+RL+IYY RV +EG ASD +G +RD K + V DE PY K + +P+A A A+ H + Y V QT +K LA+ YPV+ G V++SFES VA TGVVPMP GE LGGH V VGYDDA+ FT+ NSW T WG G+ T+PY Y+L S+LASDFWT K Sbjct: 16 DQRDFHFAAPMAVQANLPPAVDL--TPACPPVYDQGQLGSCTGNGVAGVVQFDALKEKLPDTSTPSRLFIYYNERV-IEGTVASD-AGAQIRDGIKTVATTGVCDETLWPYDITKFANKPAAACYAAAKAHRAITYSRVGQTLTQMKGCLASGYPVVFGFTVYDSFESAQVASTGVVPMPAAGEGVLGGHCVVAVGYDDASSRFTIRNSWGTGWGQGGYATMPYPYLLSSSLASDFWTVK 251 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161773 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1409 ID=mRNA_1409|Name=jgi.p|Trimin1|161773|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=855bp|location=Sequence derived from alignment at Contig_18:971017..971871- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTTGTTGAAGACAGCTCGCACCGCAGCAAATCACGCAAAGCCGGTGGAback to top protein sequence of jgi.p|Trimin1|161773 >Trimin1|161773|e_gw1.18.106.1 ID=Trimin1|161773|e_gw1.18.106.1|Name=jgi.p|Trimin1|161773|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=285bp MLLKTARTAANHAKPVEIAEDDAPALRTGPLTGRKFHLKRQSFDRRDIVFback to top mRNA from alignment at Contig_18:971017..971871- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1409 ID=mRNA_1409|Name=jgi.p|Trimin1|161773|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=855bp|location=Sequence derived from alignment at Contig_18:971017..971871- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_18:971017..971871- >mRNA_1409 ID=mRNA_1409|Name=jgi.p|Trimin1|161773|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=855bp|location=Sequence derived from alignment at Contig_18:971017..971871- (Tribonema minus UTEX_B_3156 )back to top |