mRNA_1400 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|161766 vs. uniprot
Match: A0A835Z6K4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6K4_9STRA) HSP 1 Score: 712 bits (1837), Expect = 3.610e-259 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 1 Query: 1 MSQSRTWFEELFGFAEEGNHSYHDVQSMFEMRGTQLTSIANGRSFNAGTFTTPTLQELRRKGRRALRSSSARGQRRHGVHVTHTTVADIMSMHYEYPGAVFQAASQFNCLEFPDPGTTPEHGITQYAFDNTQGPACALACAAGTVLRNYLVKMPGGGRGQTAARQLNMLDELEEAVDNGARKYFLVKNGYITSTSRKLAALANVLSEDMDALVKVGLHEGVGVTFSGRTHGRYIQPSGAPTQVTQVYCSAVSIGYSGIAAREWELLAYVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKSWIAASIGRAVQALNAAGADLDVHVCHYRTVDGHMARMIDAACSHVST 1068 MSQSRTWFEELFGFAEEGNHSYHDVQSMFEMRGTQLTSIANGRSFNAGTFTTPTLQELRRKGRRALRSSSARGQRRHGVHVTHTTVADIMSMHYEYPGAVFQAASQFNCLEFPDPGTTPEHGITQYAFDNTQGPACALACAAGTVLRNYLVKMPGGGRGQTAARQLNMLDELEEAVDNGARKYFLVKNGYITSTSRKLAALANVLSEDMDALVKVGLHEGVGVTFSGRTHGRYIQPSGAPTQVTQVYCSAVSIGYSGIAAREWELLAYVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKSWIAASIGRAVQALNAAGADLDVHVCHYRTVDGHMARMIDAACSHVST Sbjct: 1 MSQSRTWFEELFGFAEEGNHSYHDVQSMFEMRGTQLTSIANGRSFNAGTFTTPTLQELRRKGRRALRSSSARGQRRHGVHVTHTTVADIMSMHYEYPGAVFQAASQFNCLEFPDPGTTPEHGITQYAFDNTQGPACALACAAGTVLRNYLVKMPGGGRGQTAARQLNMLDELEEAVDNGARKYFLVKNGYITSTSRKLAALANVLSEDMDALVKVGLHEGVGVTFSGRTHGRYIQPSGAPTQVTQVYCSAVSIGYSGIAAREWELLAYVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKSWIAASIGRAVQALNAAGADLDVHVCHYRTVDGHMARMIDAACSHVST 356
BLAST of jgi.p|Trimin1|161766 vs. uniprot
Match: A0A835ZCW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCW7_9STRA) HSP 1 Score: 599 bits (1545), Expect = 1.050e-214 Identity = 302/353 (85.55%), Postives = 320/353 (90.65%), Query Frame = 1 Query: 1 MSQSRTWFEELFGFAEEGNHSYHDVQSMFEMRGTQLTSIANGRSFNAGTFTTPTLQELRRKGRRALRSSSARGQRRHGVHVTHTTVADIMSMHYEYPGAVFQAASQFNCLEFPDPGTTPEHGITQYAFDNTQGPACALACAAGTVLRNYLVKMPGGGRGQTAARQLNMLDELEEAVDNGARKYFLVKNGYITSTSRKLAALANVLSEDMDALVKVGLHEGVGVTFSGRTHG-RYIQPSGAPTQVTQVYCSAVSIGYSGIAAREWELLAYVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKSWIAASIGRAVQALNAAGADLDVHVCHYRTVDGHMARMIDAACS 1056 MSQSRTWF+ELFGFAEEGNHSYHDVQSMF + TQLTSIANGR + GTFTTPTL+E RRKG +AL S+S + RRHGVHV HTTV +IM MHYEYPGAVFQAASQFNCLEFPDP TTPE GITQYAFDNTQGPACALACAAGTVLRNY+VKMPGGGRGQTAARQLNMLDELEEA+DN A KYFLVKNGY+TSTS LAALA VLS+DMDALVKVGLHE VGVTFSGRT G RYIQP G+P +VTQVYCSA+SIGYSGIAAREWELLA VVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPK WIA +IG AVQ L+AAGADLDVHVCHYR+VD HMARMIDAACS Sbjct: 1 MSQSRTWFKELFGFAEEGNHSYHDVQSMFGIHSTQLTSIANGRESDVGTFTTPTLKEQRRKGHQALASASTKRPRRHGVHVDHTTVTNIMHMHYEYPGAVFQAASQFNCLEFPDPLTTPEQGITQYAFDNTQGPACALACAAGTVLRNYMVKMPGGGRGQTAARQLNMLDELEEAIDNRACKYFLVKNGYVTSTSSDLAALATVLSDDMDALVKVGLHEAVGVTFSGRTAGGRYIQPHGSPAKVTQVYCSALSIGYSGIAAREWELLARVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKRWIAEAIGLAVQVLHAAGADLDVHVCHYRSVDAHMARMIDAACS 353
BLAST of jgi.p|Trimin1|161766 vs. uniprot
Match: A0A067CPF5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CPF5_SAPPC) HSP 1 Score: 256 bits (654), Expect = 1.320e-79 Identity = 156/349 (44.70%), Postives = 206/349 (59.03%), Query Frame = 1 Query: 19 WFEELFGFAEEGNHSYHDVQSMFEM-RGTQLTSIANGRSFNAGTFTTPTLQELRRKGRRALRSSSARGQRRHGVHVTHTTVADIMSMHYEYPG--AVFQAASQFNCLEFPDPGTTPEHGITQYAFDNTQGPACALACAAGTVLRNYLVKMPGGGRGQTAARQLNMLDELEEAVDNGARKYFLVKNGYITSTSRKLAALANVL----SEDMDALVKVGLHEGVGVTFSGRTHGRYIQPSGAPTQVTQVYCSAVSIGYSGIAAREWELLAYVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKSWIAASIGRAVQALNAAGADLDVHVCHYRTVDGHMARMID 1044 WF+ LFGF E+G +Y +VQ+ FE+ TQL S+ NG++++ GTF +L LR + G+ H V +TH D+ +H + A FQAASQFNCLEF P PE G+T YA D TQGPACA+A GTV RNY +GQ AA Q+N L+++E+ +DN +YF V NGY +T+ L L +VL ++D++ +KVG+H V V F R R PS VTQVYCSA+S GYS +A W A +VL A YEATLWAA++NA +TG QVFLT +GGGVF N +WI +I AV +A DLDV + HY VD + +D Sbjct: 3 WFKTLFGFREKGL-AYDEVQAKFEIVNETQLCSLTNGKTYDIGTFECLSLATLRDH-------AMCVGRLGH-VRLTHAASKDVFLLHCDPRNRHATFQAASQFNCLEFAHPRARPEDGVTIYAHDMTQGPACAIAAGPGTVFRNYFASPDADQQGQRAASQINNLEDVEDMLDNERHQYFRVVNGYTDATNASLQRLNDVLETANTDDLENALKVGVHWNVEVPFQARY--RPSSPSSDKQLVTQVYCSAISCGYSYASATAWAPFASLVLRASYEATLWAAIINASITGSTQVFLTVLGGGVFGNKTAWILDAIAVAVAKCHA--FDLDVVIVHYMKVDKALVTALD 338
BLAST of jgi.p|Trimin1|161766 vs. uniprot
Match: UPI00198F15B8 (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI00198F15B8) HSP 1 Score: 254 bits (650), Expect = 5.250e-79 Identity = 160/357 (44.82%), Postives = 212/357 (59.38%), Query Frame = 1 Query: 4 SQSRTWFEELFGFAEEGNHSYHDVQSMFEMRGTQLTSIANGRSFNAGTFTTPTLQELRRKGRRALRSSSARGQRRHGVHVTHTTVADIMSMHY--EYPGAVFQAASQFNCLEFPDPGTTPEHGITQYAFDNTQGPACALACAAGTVLRNYLVKMPGGGRGQTAARQLNMLDELEEAV-DNGARKYFLVKNGYITSTSRKLAALANVLSE-DMDAL---VKVGLHEGVGVTFSGRTHGRYIQPSGAPTQVTQVYCSAVSIGYSGIAAREWELLAYVVLDAIYEATLWAA-VLNAQLTGVRQVFLTFVGGGVFANPKSWIAASIGRAVQALNAAGADLDVHVCHYRTVDGHMARMIDAA 1050 S++ WFE+LFGF E G Y + + + L S AN R F G F TP+L ELR + A R + VTH + D++ +H E A+FQ ASQFNCLEF P TPE G+T YA+D TQGPAC+LA AA TV RNY V + GG GQT RQ++ L L+ + + GA Y+ V NGY S +LA L L+E D ++L + +GLHEGVGVTF+ R + +P+ PT+V+Q CSA+S GYS +A +WE LA +VLDA YEATL AA V+ +V+LT +GGG F N WI A+IGRA+ ++ GA LDV + HYR +D + I+ A Sbjct: 5 SETGDWFEQLFGFVERG---YDETRRQLVIEDDMLRSRANDRVFPIGRFGTPSLAELRERTAEAPRGE---------LRVTHVAIGDVLELHAMPENRDALFQVASQFNCLEFASPHVTPEDGVTGYAYDPTQGPACSLAAAAATVYRNYFVPV-GGKPGQTRDRQIDNLAGLDRRLGEPGA--YWTVVNGYTNSEPHRLARLERALAERDRESLLGEIAIGLHEGVGVTFADR----FTEPT-QPTRVSQALCSALSCGYSDVAHADWEPLATLVLDAAYEATLRAALVVPRDADATAKVWLTRLGGGAFGNRMEWITAAIGRALAVMD--GARLDVRIAHYRRIDSSVQADIEQA 339
BLAST of jgi.p|Trimin1|161766 vs. uniprot
Match: A0A2D9TE96_9DELT (Uncharacterized protein n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9TE96_9DELT) HSP 1 Score: 251 bits (640), Expect = 1.130e-77 Identity = 157/352 (44.60%), Postives = 203/352 (57.67%), Query Frame = 1 Query: 16 TWFEELFGFAEEGNHSYHDVQSMFEMRGTQLTSIANGRSFNAGTFTTPTLQELRRKGRRALRSSSARGQRRHGVHVTHTTVADIMSMHYEYPGAVFQAASQFNCLEFPDPGTTPEHGITQYAFDNTQGPACALACAAGTVLRNYLVKMPGGGRGQTAARQLNMLDELEEAVDNGARKYFLVKNGYITSTSRKL----AALANVLSEDMDALVKVGLHEGVGVTFSGRTHGRYIQPSGAPTQVTQVYCSAVSIGYSGIAAREWELLAYVVLDAIYEATLWAAVLNAQL-TGVRQVFLTFVGGGVFANPKSWIAASIGRAVQALNAAGADLDVHVCHYRTVDGHMARMIDAACS 1056 TWF++LFGF E ++ + +S F + G +L ++ GR F GTF TPTL LR + A G RH H + D++ +H + GA+FQAASQFNCLEFP P TTPE G+T YA D TQGPAC+LA AA TV RNY + G GQTA QLN L + A+ + K V+NGY S +L AAL + +D+ ++VG+ VTF+ R QP AP V+Q +CSA+S GYS + W LA +VLD YEATL AA + + G V+LTF+GGGVF N WIA +IGRA++ AA LDV V HYR VD M MI+ A + Sbjct: 3 TWFQDLFGFPET---TWAETRSRFAVEGEELVALPTGRRFGVGTFATPTLHALRERS-----EGFAPGTLRHA----HVAIGDVLELHAAHEGAMFQAASQFNCLEFPGPDTTPEDGVTGYAHDPTQGPACSLAAAAATVYRNYFAPV-GEHVGQTAQHQLNGLAGVLRALGDAGTKVE-VRNGYTFSDDARLEPLNAALETLDRDDLMGGLRVGIQSRCAVTFASR-----FQPPDAPRHVSQAFCSALSCGYSPGSLARWRGLAKLVLDGAYEATLLAAAQDREDGRGSGVVWLTFLGGGVFGNSPVWIADAIGRALR--RAAHLPLDVRVAHYRRVDDGMVTMIEQAAA 333
BLAST of jgi.p|Trimin1|161766 vs. uniprot
Match: T0R4Z5_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R4Z5_SAPDV) HSP 1 Score: 251 bits (640), Expect = 1.940e-77 Identity = 153/349 (43.84%), Postives = 198/349 (56.73%), Query Frame = 1 Query: 19 WFEELFGFAEEGNHSYHDVQSMFEM-RGTQLTSIANGRSFNAGTFTTPTLQELRRKGRRALRSSSARGQRRHGVHVTHTTVADIMSMHYE--YPGAVFQAASQFNCLEFPDPGTTPEHGITQYAFDNTQGPACALACAAGTVLRNYLVKMPGGGRGQTAARQLNMLDELEEAVDNGARKYFLVKNGYITSTSRKLAALANVL----SEDMDALVKVGLHEGVGVTFSGRTHGRYIQPSGAPTQVTQVYCSAVSIGYSGIAAREWELLAYVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKSWIAASIGRAVQALNAAGADLDVHVCHYRTVDGHMARMID 1044 WF+ LFGF E+G +Y ++Q+ FE+ TQL S+ N ++++ GTF +L LR R R VTH D+ +H + + A FQAASQFNCLEF P PE G+T YA D TQGPACA+A GTV RNY +GQ A Q+N LD++E +DN +YF V NGY +T+ L L +VL + D++ +KVG+H V V F R H PS VTQVYCSA+S GYS + W A +VL A YEATLWAA++NA TG +VFLT +GGGVF N +WI +I AV +A DLDV V HY VD + +D Sbjct: 3 WFKTLFGFREKGL-AYDEIQAKFEIVNETQLRSVTNDKAYDIGTFECLSLATLRDHAMCVGRLGQLR--------VTHVASKDVFLLHCDPLHRNATFQAASQFNCLEFAHPRARPEDGVTIYARDMTQGPACAIAAGPGTVFRNYFASPDADLQGQRATSQINNLDDVEVILDNERHQYFHVVNGYTDATNASLQRLNDVLETADNNDLEDALKVGVHWNVEVPFKARYHPT--SPSSDKQLVTQVYCSAISCGYSYASTTAWAPFASLVLRASYEATLWAAIINASTTGSNRVFLTVLGGGVFGNKTTWILDAIAAAVAKCHA--FDLDVVVVHYLKVDKALVTALD 338
BLAST of jgi.p|Trimin1|161766 vs. uniprot
Match: A0A485LIK9_9STRA (Aste57867_21038 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIK9_9STRA) HSP 1 Score: 246 bits (629), Expect = 6.850e-76 Identity = 157/355 (44.23%), Postives = 207/355 (58.31%), Query Frame = 1 Query: 19 WFEELFGFAEEGNHSYHDVQSMFEM--RGTQLTSIANGRSFNAGTFTTPTLQELRRKGRRALRSSSARGQRRHGVHVTHTTVADIMSMHYEYP--GAVFQAASQFNCLEFPDPGTTPEHGITQYAFDNTQGPACALACAAGTVLRNYLVKMPGGGRGQTAARQLNMLDELEEAVDNGARKYFLVKNGYITSTSRKLAALANVLSED-------MDALVKVGLHEGVGVTFSGRTHGRYIQPSGAPTQVTQVYCSAVSIGYSGIAAREWELLAYVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKSWIAASIGRAVQALNAAGADLDVHVCHYRTVDGHMARMIDAA 1050 WFE+LFGF E+ + SY D Q+ FE GT+L + NG+++ GTF +L LR+ R +A R V H D+ +H + GA+FQ ASQFNCLEF P PE+G+T YA DNTQGPACA+A TV+RNY ++ G GQTAA QLN LD ++ + V NGY ST +LAAL L+ D DAL K+G+H V V F+ R R + AP V+QVYCSA+S+GYS ++ W A +VL+A YEATLWA VLN + TG VFLT +GGGVF N + WI +I +A+ A+ A G LDV V H+R VD + +++A Sbjct: 4 WFEQLFGFREK-DFSYADRQAQFEFLENGTKLRARPNGQTYEVGTFECLSLAHLRQ----VARDDAAAVTRTRPTTVRHIASTDVFLLHCDRDNRGALFQGASQFNCLEFVSPRGIPENGVTCYAMDNTQGPACAIAAGPATVVRNYFARV-GDQVGQTAAHQLNNLDGVQRLLPPSCLD---VVNGYTDSTDARLAALNKCLAADPALRTAATDAL-KIGVHWHVQVPFADR---RTVLTHAAPHVVSQVYCSAISVGYSAASSAAWAPFASLVLEASYEATLWAGVLNCRQTGCPTVFLTLLGGGVFRNREDWIVGAIAKALGAVAAYG--LDVVVVHFRHVDRSIVDALESA 343
BLAST of jgi.p|Trimin1|161766 vs. uniprot
Match: A0A024U7R5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7R5_9STRA) HSP 1 Score: 246 bits (627), Expect = 2.200e-75 Identity = 160/357 (44.82%), Postives = 200/357 (56.02%), Query Frame = 1 Query: 19 WFEELFGFAEEGNHSYHDVQSMFEMRG--TQLTSIANGRSFNAGTFTTPTLQELRRKGRRALRSSSARGQRRHGVHVTHTTVADIMSMHYEYPG--AVFQAASQFNCLEFPDPGTTPEHGITQYAFDNTQGPACALACAAGTVLRNYLVKMPGGGRGQTAARQLNMLDELEEAVDNGARKYFLVKNGYITSTSRKLAAL-ANVLSED-----MDALVKVGLHEGVGVTFSGRTHGRYIQPSGAPTQ---VTQVYCSAVSIGYSGIAAREWELLAYVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKSWIAASIGRAVQALNAAGADLDVHVCHYRTVDGHMARMIDAA 1050 WF LFGF E +++Y DVQ FE+ T L S NG+++ GTF +L LR GR ++ G+ V H D+ H + A+FQAASQ NCLEF P PE G+T+Y D TQGPACA+A GTV RNY V + GG GQTA Q+N LD+++ + N KYF V NGY STSR+L L VL +D + +K+GLH V V F R P A V+Q YCSA+S+GYS +AR+W A +VL+A YEATLWA VLN Q TG +VFLT VGGGVF N WI +I AV A+ G LDV + HYR VD R + A Sbjct: 13 WFRALFGFREL-DYAYDDVQGKFELLNDATVLRSTVNGKAYTIGTFECMSLGALRSAGR----DTAVGGE----TTVRHEASRDVFLDHCDTNNKDALFQAASQLNCLEFMSPRCVPEQGVTRYNRDLTQGPACAIAAGPGTVYRNYFVPV-GGRTGQTATSQVNNLDDVQAMLANDVHKYFDVVNGYTDSTSRQLGKLNTTVLCDDSMRGKLSDAIKIGLHWNVQVPFVAR-----YMPVAATRPIHCVSQAYCSAISVGYSAASARDWAPFAKLVLEASYEATLWAGVLNYQRTGCNKVFLTAVGGGVFGNATEWIVDAIASAVAAVARCG--LDVVLVHYRRVDESFQRDLAVA 352
BLAST of jgi.p|Trimin1|161766 vs. uniprot
Match: A0A1V9YR91_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YR91_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.950e-74 Identity = 165/361 (45.71%), Postives = 208/361 (57.62%), Query Frame = 1 Query: 19 WFEELFGFAEEGNHSYHDVQSMFEMRGT-QLTSIANGRSFNAGTFTTPTLQELRRKGRRALRSSSARGQRRHGVHVTHTTVADIMSMHYEYPG--AVFQAASQFNCLEFPDPGTTPEHGITQYAFDNTQGPACALACAAGTVLRNYLVKMPGGGR--------GQTAARQLNMLDELEEAVDNGARKYFLVKNGYITSTSRKLAALANVLS---EDM--DALVKVGLHEGVGVTFSGRTHGRYIQPSGAPTQ-VTQVYCSAVSIGYSGIAAREWELLAYVVLDAIYEATLWAAVLNAQLTGVRQVFLTFVGGGVFANPKSWIAASIGRAVQALNAAGADLDVHVCHYRTVDGHMARMIDAA 1050 WF LFGF E+G SY +VQ+ FE+ G QL S ANG +F+ GTF +L LR AL S GQ V V+H D+ MH + AVFQAASQFNCLEF P PE+G+T YA D TQGPACA+A TV RNYLV M GQT + Q+N LD++E+ + N +YF V NGY +T++ LA L +LS ED DAL K+G+H V F R R + AP Q VTQ YCSA+S GYS + + W A +VL A YEA LW AV+NA +TG +V+LT +GGGVFAN +SWI +I AV +LDV V HY+ VD + ++ A Sbjct: 3 WFRVLFGFEEKGR-SYAEVQAQFELVGKRQLRSRANGATFDIGTFECLSLAVLREH---ALGVGST-GQ----VRVSHVASNDVFLMHCDPSNHHAVFQAASQFNCLEFAHPRAKPENGVTIYALDMTQGPACAIAAGPATVFRNYLVPMRSNDANGCAIERAGQTGSCQINNLDDIEDLLGNEEHQYFHVVNGYTDATNQSLARLNTLLSTVAEDALCDAL-KIGVHWHAQVPFRARYKMR---SADAPKQLVTQAYCSALSCGYSYASTKFWAPFARLVLKASYEAALWTAVINAAMTGCHKVYLTILGGGVFANEQSWIIDAIALAVNKCRE--FELDVIVVHYKRVDVKVVNELEKA 348
BLAST of jgi.p|Trimin1|161766 vs. uniprot
Match: A0A3D2CB01_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D2CB01_9DELT) HSP 1 Score: 242 bits (618), Expect = 4.010e-74 Identity = 168/352 (47.73%), Postives = 197/352 (55.97%), Query Frame = 1 Query: 16 TWFEELFGFAEEGNHSYHDVQSMFEMRGTQLTSIANGRSFNAGTFTTPTLQELRRKGRRALRSSSARGQRRHGVHVTHTTVADIMSMHYE--YPGAVFQAASQFNCLEFPDPGTTPEHGITQYAFDNTQGPACALACAAGTVLRNYLVKMPGGGRGQTAARQLNMLDELEEAVDNGARKYFLVKNGYITSTSRKLAALANVLSE-DMDALV---KVGLHEGVGVTFSGRTHGRYIQPSGAPTQVTQVYCSAVSIGYSGIAAREWELLAYVVLDAIYEATLWAAV-LNAQLTGVRQVFLTFVGGGVFANPKSWIAASIGRAVQALNAAGADLDVHVCHYRTVDGHMARMIDAA 1050 TWFE LFGF E Y Q F LTS NGR F GTF+TP++ LR + G + + H V DI + H + GAVFQAASQ NCLEF P PE G+TQYA D TQGPACALA AAGTVLRNY + GG GQTA RQLN L ++ A+ A V+NGY S L L L+E D DALV +VG+ VGVTFS R YI P P V+Q+Y SA+S GYS + W LA + L+ YEATL AA L A G V+LT +GGGVF N +WIA +IGRA+ A DLDV V HYR VD A +IDAA Sbjct: 17 TWFETLFGFREG---PYDWTQQQFHFEPGTLTSRVNGRRFPVGTFSTPSVATLRER---------VVGLSPGTLTLRHQAVDDIFAAHAQPASAGAVFQAASQLNCLEFAAPDVVPEDGVTQYASDPTQGPACALAAAAGTVLRNYFAPV-GGIEGQTADRQLNNLAGVQAAL-GPAGALVEVRNGYTFSNDLALDRLNAALAERDRDALVAAVRVGVQASVGVTFSQR----YI-PLSEPQTVSQIYASALSCGYSAGSLNRWAPLATIALEGAYEATLLAAAALKASGEGSGVVWLTLLGGGVFGNRDAWIADAIGRAIA--KAQHHDLDVRVAHYRRVDARRAALIDAA 347 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161766 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1400 ID=mRNA_1400|Name=jgi.p|Trimin1|161766|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1071bp|location=Sequence derived from alignment at Contig_18:947511..948581- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGCCAAAGTCGTACCTGGTTTGAGGAGCTTTTTGGGTTTGCCGAGGAback to top protein sequence of jgi.p|Trimin1|161766 >Trimin1|161766|e_gw1.18.147.1 ID=Trimin1|161766|e_gw1.18.147.1|Name=jgi.p|Trimin1|161766|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=357bp MSQSRTWFEELFGFAEEGNHSYHDVQSMFEMRGTQLTSIANGRSFNAGTFback to top mRNA from alignment at Contig_18:947511..948581- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1400 ID=mRNA_1400|Name=jgi.p|Trimin1|161766|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1071bp|location=Sequence derived from alignment at Contig_18:947511..948581- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_18:947511..948581- >mRNA_1400 ID=mRNA_1400|Name=jgi.p|Trimin1|161766|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1071bp|location=Sequence derived from alignment at Contig_18:947511..948581- (Tribonema minus UTEX_B_3156 )back to top |