mRNA_1382 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|161725
Unique NamemRNA_1382
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|161725 vs. uniprot
Match: A0A836CL48_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL48_9STRA)

HSP 1 Score: 701 bits (1810), Expect = 3.190e-255
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 1
Query:    1 MAVTAAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLTAYDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPVHLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVLGTATTPQSAARASGIPTLK 1053
            MAVTAAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLTAYDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPVHLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVLGTATTPQSAARASGIPTLK
Sbjct:    1 MAVTAAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLTAYDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPVHLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVLGTATTPQSAARASGIPTLK 351          
BLAST of jgi.p|Trimin1|161725 vs. uniprot
Match: A0A836CFT8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT8_9STRA)

HSP 1 Score: 616 bits (1588), Expect = 1.340e-221
Identity = 300/338 (88.76%), Postives = 320/338 (94.67%), Query Frame = 1
Query:    1 MAVTAAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLTAYDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPVHLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVLGTATTP 1014
            MA TAAELFAT+GTGINLGNTLD AQ++RDT VI RRLTALR+KGF+HVRIPVTWQPMGCS  RVNSPSFVA+VEGAV AAI LGFTVILNAHHEAWLT+YD S  MNAAFADLWRK++LHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRA+SPTRI+LIQPNNLGDAWAARATYRTPSLLPGQGKDKYLA++VHSYGPP+FALP GSNAYFL+MADPEAAVC+HVK LIAELLKLRLALGSTPVHLGEFG+GREN ADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDR+A  V+FTFDLAG+VLGT  TP
Sbjct:    1 MAATAAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTSYDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRNANCVDFTFDLAGDVLGTTATP 338          
BLAST of jgi.p|Trimin1|161725 vs. uniprot
Match: A0A836CEX1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX1_9STRA)

HSP 1 Score: 305 bits (782), Expect = 2.920e-98
Identity = 160/339 (47.20%), Postives = 220/339 (64.90%), Query Frame = 1
Query:   13 AAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLTAYDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTM--------CPCTPAAQQLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPVHLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVLGTA 1005
            AA+L AT+ +G+NLGNTLDTA HS D +V+ RRL A+R +G+ HVRIPV+W+P   +  R++ P FV  VE AV  AI LG  VI+NAHHE WLT YD S AM   F  +WR+I+  F+  PQ+KL+FE+LNEP GTM           +P A  LTR LNA GY  +R+VS  R++LIQPN++G  + A   + TP +LPG G+D+YLAV++HSY P  F  P+GS++ F +    EA + +  ++L+  +  + +     PVH+GEFG+GR N   RD+ +V  YYR  +  ARDA IP   WDDG   DF IT F+RDAT + F + ++  +L +A
Sbjct:   10 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPV-----PVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDG--GDFAITKFNRDATSIQFVYGISEALLSSA 341          
BLAST of jgi.p|Trimin1|161725 vs. uniprot
Match: A0A836CFX5_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX5_9STRA)

HSP 1 Score: 249 bits (635), Expect = 5.230e-77
Identity = 141/341 (41.35%), Postives = 196/341 (57.48%), Query Frame = 1
Query:    1 MAVTAAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLTA-YDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTM----CPCTPAAQQLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALG--STPVHLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVLGT 1002
            MA TA ++  ++GTGINLG   ++ QHSRD   I   L+A++ KGF HVRIPVTW P       ++ P F+ +++ A   A++LG TVI+NAHHE WL   YD S A N  F +LWR+I+  + +  Q +++FE+LNEP           T A   LTR +N  GY  +RAVS TR++L+QPNN G+ W+    Y   + LPG G DKYL +  H+Y    F L  G N ++ ++AD  A V K +  ++    K   A+G  +  +HLGEFG+GR +   RDA IV  YY+  +K  R+  I  T W DG    F +T  D   T V + F LA +VL T
Sbjct:    1 MAKTATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAATSACIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIV----KWHGAIGKDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGW--FALTLTDARQT-VTWPFGLADQVLKT 334          
BLAST of jgi.p|Trimin1|161725 vs. uniprot
Match: A0A835ZM96_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZM96_9STRA)

HSP 1 Score: 231 bits (588), Expect = 5.960e-70
Identity = 132/340 (38.82%), Postives = 190/340 (55.88%), Query Frame = 1
Query:    1 MAVTAAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWL-TAYDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTM----CPCTPAAQQLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALG---STPVHLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVL 996
            MA TA ++ + +G G+NLG   ++ Q+SR    +   L A++ KGF HVRIPVTW P       ++   FV +++ A+  A+++G T+++NAHHE WL   YD S   NA F  LW +I+  +++  Q +LLFE+LNEP G         T    +LTRT+N  GY  +R V  TRI+L+QPN+ G+ WA    Y T + LPG G DK + +  H+Y    F L  G+NA++ ++ D  A + K V    A L+K    +G   +  +HLGEFG+GR +   RDA IV  YYR  +K  RD  I  T W D     F +T  D     V + F LA ++L
Sbjct:    1 MAKTATQILSEIGIGLNLGQVFESKQNSRRPDQVRPWLAAVKAKGFGHVRIPVTWYPSDACV--LDDSEFVHLLDDAIQYAVKIGLTLVINAHHEKWLFDYYDGSDVFNAKFKALWSRIAYKYRAYTQQQLLFEVLNEPDGKFGIGSASTTTGCIELTRTINRVGYEGIRYVDATRIVLVQPNDAGNIWAVPRVYPTKATLPGAGADKSVGIQCHTYDHYNFCLQGGTNAFYKSVDDISADIGKRV----AMLMKWHTDIGGQDTVALHLGEFGVGRLDQRQRDADIVRAYYRITSKLFRDKSICCTAWSDNGW--FALTTMDASRR-VTWPFGLADQIL 331          
BLAST of jgi.p|Trimin1|161725 vs. uniprot
Match: A0A835Z601_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z601_9STRA)

HSP 1 Score: 228 bits (580), Expect = 1.030e-68
Identity = 129/337 (38.28%), Postives = 185/337 (54.90%), Query Frame = 1
Query:   13 AAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLT-AYDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQ-----LTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPV---HLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVL 996
            A+++   +G G+NLG T ++  +SR  + +   L  +R+KGF HVRIPVTW P      ++N   F+  ++ ++  A+++G  VILN HHE W+   YD S   N  F  LW +I+  +K  PQ+KL+FE+LNEP G       +A       LTR +N  G  A+RAV  TRI+L+QPN +G+ W+    Y +   LPG G DKYL V  H+Y   +F L +GSN Y+ ++ +  A + K V+ +     K  + +G   V   HLGEFG+GR +   RDA IV  YYR  +   R   I  T W DG    F + + D   T V F F LA  V+
Sbjct:    6 ASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMI----KKWHVTIGGNDVVALHLGEFGVGRLDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGW--FNVASLDSRGT-VQFPFGLADMVI 335          
BLAST of jgi.p|Trimin1|161725 vs. uniprot
Match: A0A813JL32_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JL32_POLGL)

HSP 1 Score: 183 bits (464), Expect = 1.220e-51
Identity = 131/336 (38.99%), Postives = 173/336 (51.49%), Query Frame = 1
Query:   34 LGTGINLGNTLD-TAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLT-AYDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTM---------CPCTPAAQQLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPVHLGEFGIGR--ENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVLGT 1002
            +G GINLGNT D T   +R  S I R +    +KGFR+VRIPVTW   G S N   S      V  AV  A++ GF V+LN HHE WL  AY+ +P  N  FA LWR I+ HF +    +L+FE+LNEP G +          P       LTR +N  GY AVR+VS TRI+ + PN  G        Y   S LPG G D YL V+VHSY P  F      N++F ++   ++++ +   T          A G  P H GE+G+GR  +N +DRD  +V  YY+ +  +        +VWDD     F ITN   D ++V   + LA  VL T
Sbjct:    1 MGRGINLGNTFDMTGMQNRSKSSIGRMIHLFWKKGFRNVRIPVTW---GDSFNE--SSLLTQGVTEAVKYALDKGFYVVLNTHHERWLKDAYNNTPYYNDRFAALWRGIATHFANA-SCRLVFEILNEPDGALGSFASPDAPSPFNETQINLTRAVNLVGYEAVRSVSNTRIVFVAPNGQGSNALISTIYPNASYLPGAGSDPYLGVTVHSYDPWDFCGQDSRNSHFKSLFAMKSSLTERFNTFS----DWYYATG-VPTHWGEYGLGRRPQNNSDRDTDMVREYYKFVTNSLALHGWASSVWDDQGW--FAITN---DYSYV---YGLADAVLST 317          
BLAST of jgi.p|Trimin1|161725 vs. uniprot
Match: A0A835Z688_9STRA (Family 5 glycoside hydrolase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z688_9STRA)

HSP 1 Score: 177 bits (449), Expect = 3.120e-49
Identity = 117/298 (39.26%), Postives = 160/298 (53.69%), Query Frame = 1
Query:   34 LGTGINLGNTLDTAQHSRDTSV-ITRRLTALREKGFRHVRIPVTWQPMG-CSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLTA-YDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPVHLGEFGIG-RENFADR--DAPIVHLYYRTIAKAARDACIPPTVWDD 909
            LG G NLGN  D+  +S D    + R ++  + KGF HVRIPVTW   G C     + P FV  +  AV  A+ L   VI++ HHE+WL   +D S  + A F  LW  IS  F  +  D L+F++LNEP              TR +N  GY+A+RAV+ TR IL   N++G  + A+A Y T + LPG GKD  LA+SVH+YGPP+FAL  GSN  F  +A+  A++ K      A+L K     G   +   EFG+G R++   R  D  +   Y+RT    + +   P TVW D
Sbjct:    9 LGVGFNLGNRFDSRTNSIDFDTSVKRAISDFKAKGFTHVRIPVTWIYKGKCKLK--SDPYFVQQLTKAVKYAVSLKLFVIVDTHHESWLKDHFDGSATLKATFEQLWTDISHLFADISDDALIFQVLNEPPSNFDIAK------TRLVNQWGYDAIRAVTTTRCILCMGNDMGSPFGAKAVYPTAADLPGAGKDARLALSVHTYGPPEFALQDGSNDVFATVAEVTASIDKR----FAQLKKWIARSGHVTMVWDEFGVGARDDDQARRGDLRVREFYHRTANLCSMEKW-PCTVWCD 293          
BLAST of jgi.p|Trimin1|161725 vs. uniprot
Match: UPI001A96A82F (cellulase family glycosylhydrolase n=1 Tax=Pedobacter sp. SYSU D00873 TaxID=2810310 RepID=UPI001A96A82F)

HSP 1 Score: 174 bits (441), Expect = 2.230e-46
Identity = 121/340 (35.59%), Postives = 164/340 (48.24%), Query Frame = 1
Query:    4 AVTAAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCST------NRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLT-AYDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQG-------TMCPCTPAAQQLTRTLNATGYNAVRAV---SPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPVHLGEFGIGREN--FADRDAPIVHLYYRTIAKAARDACIPPTVWDD--------GTGNDFEITNF 942
            A+TA      +GTG NLGNT D   HS D + I   +      G RH+RIP+TW     S       N   + + +A +   V  A+  G  V++NAHHE WL  +YD S   N  F  LW  I+ +FK+   DKL+FE+LNEP+G       +  P    A  LTR +N  GY+A+RA    + TR+I+I PN   +       Y   + LPG G D YLA  VHSY P  F    GSN+ +        A    + T  +    L +     PV+ GEFG GR +   + RD+  V  YYRT+        + PTVWDD        G+G+ +   NF
Sbjct:   47 AITALTAIDNMGTGFNLGNTFDKPSHSTDPNNIKPIIDLYYNAGMRHMRIPITWMDEFTSRLADANGNLNTNHTRLAQLNSVVDYALGKGMYVVINAHHEHWLKDSYDGSSNYNTKFTTLWTGIANYFKN-KSDKLMFEVLNEPEGKFGQWGTSTLPTNSTAINLTRQINKVGYDAIRATGGNNATRVIMISPNGQANDGQLDDVYPAKAGLPGAGNDLYLAAHVHSYDPWNFCGQEGSNSNYPG----RQAFINDINTTASHAGALGI-----PVNYGEFGAGRVSATVSQRDSWQVREYYRTMRTTMLSHDMAPTVWDDRGWFSLISGSGSSYNFVNF 376          
BLAST of jgi.p|Trimin1|161725 vs. uniprot
Match: UPI0019BF7A6A (Cellulase family glycosylhydrolase n=1 Tax=Flavobacterium sp. TaxID=239 RepID=UPI0019BF7A6A)

HSP 1 Score: 174 bits (440), Expect = 3.760e-46
Identity = 119/329 (36.17%), Postives = 165/329 (50.15%), Query Frame = 1
Query:    1 MAVTAAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRV---------NSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLTAY-DASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQG-----------TMCPCTPAAQQLTRTLNATGYNAVRAV---SPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPVHLGEFGIGRENFA--DRDAPIVHLYYRTIAKAARDACIPPTVWDD 909
            +A TAA     +GTG NLGNT D AQHS   S I   +      GFR++RIP TW   G S N +         N P F+ +      A  +    VILN HHE WL  Y + +   N  F +LW  IS HFK+ P ++L+FE+LNEP+G           T+ P +  A  LT+ LN  GY+A+RA    + TRI+++ PN   +       Y     LPG G D YLA+ +H+Y P  F    GSN+ +         +   V  ++    KL +A     VH+GEFG+GR + +  +R++  V  YYRT+ +      I  TVWDD
Sbjct:   48 IAATAA--MVAMGTGFNLGNTFDLAQHSTVPSTIYPIIDLYYNAGFRNIRIPTTWMD-GFSGNHLASATGTVNFNHPRFIQLKAVIDYALSKPNMYVILNTHHEHWLKRYYNGTATYNTPFTNLWTGISNHFKNYP-NRLVFEVLNEPEGALGDWDNDNGTTVSPNSTTAITLTKQLNQVGYDAIRATGGPNTTRIVMVSPNAQANTSQFEEVYNVKESLPGGGNDDYLAIHLHTYNPWNFCGQKGSNSNY----GGRTGIINGVSAIVTHAAKLAVA-----VHVGEFGVGRVDSSALERNSWQVREYYRTLRRELIAKNIAATVWDD 363          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161725 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CL48_9STRA3.190e-255100.00Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CFT8_9STRA1.340e-22188.76Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CEX1_9STRA2.920e-9847.20Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CFX5_9STRA5.230e-7741.35Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835ZM96_9STRA5.960e-7038.82Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z601_9STRA1.030e-6838.28Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A813JL32_POLGL1.220e-5138.99Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A835Z688_9STRA3.120e-4939.26Family 5 glycoside hydrolase n=2 Tax=Tribonema min... [more]
UPI001A96A82F2.230e-4635.59cellulase family glycosylhydrolase n=1 Tax=Pedobac... [more]
UPI0019BF7A6A3.760e-4636.17Cellulase family glycosylhydrolase n=1 Tax=Flavoba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_18contigContig_18:905480..906535 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|161725|e_gw1.18.122.1
CAZyGH5,GH9
BRITEko00000,ko00001,ko01000
KEGG ReactionR06200,R11307,R11308
KEGG Pathwayko00500,ko01100,map00500,map01100
KEGG koko:K01179
EC3.2.1.4
DescriptionBelongs to the glycosyl hydrolase 5 (cellulase A) family
COG categoryG
Max annot lvl976|Bacteroidetes
EggNOG OGsCOG2730@1|root,COG2730@2|Bacteria,4NK8X@976|Bacteroidetes
Evalue8.68e-47
Seed ortholog1168289.AJKI01000036_gene3408
Hectar predicted targeting categoryother localisation
TranscriptId162047
TrackFilteredModels1
ProteinId161725
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161725gene_1382Tribonema minus UTEX_B_3156 geneContig_18 905480..906535 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1382_1exon_1382_1Tribonema minus UTEX_B_3156 exonContig_18 905480..906535 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1382CDS_1382Tribonema minus UTEX_B_3156 CDSContig_18 905480..906535 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161725Trimin1|161725|e_gw1.18.122.1Tribonema minus UTEX_B_3156 polypeptideContig_18 905480..906535 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1382 ID=mRNA_1382|Name=jgi.p|Trimin1|161725|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1056bp|location=Sequence derived from alignment at Contig_18:905480..906535- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGTGACTGCAGCAGAACTCTTTGCCACGTTGGGCACCGGAATCAA
CCTGGGCAACACTTTAGACACTGCTCAACACAGCAGAGACACTTCAGTGA
TTACAAGGCGGCTCACTGCCTTGCGAGAAAAGGGTTTTCGACACGTGCGT
ATACCGGTCACATGGCAGCCTATGGGCTGCAGCACGAACAGAGTCAACTC
GCCTTCATTTGTTGCGATGGTCGAAGGTGCTGTCGCTGCTGCCATTGAGC
TAGGGTTTACGGTGATCTTGAACGCGCACCATGAGGCTTGGCTTACTGCA
TATGATGCATCGCCTGCAATGAATGCAGCGTTTGCAGATCTGTGGCGCAA
AATTTCACTCCACTTCAAGAGCGTTCCGCAAGACAAGCTCTTGTTCGAAT
TGCTCAACGAACCGCAAGGCACAATGTGCCCTTGCACACCTGCCGCTCAA
CAGCTCACACGCACGCTCAATGCGACAGGCTACAACGCAGTGCGGGCCGT
ATCGCCGACTCGGATCATCCTCATACAGCCGAATAATTTGGGGGACGCTT
GGGCGGCGCGTGCCACCTATCGAACACCGTCTCTCCTGCCTGGACAAGGA
AAAGACAAATACTTAGCAGTAAGCGTTCATTCATATGGCCCTCCGCAATT
CGCCTTGCCTAGTGGTAGCAATGCATACTTTTTGAACATGGCTGATCCAG
AGGCTGCTGTATGCAAGCATGTCAAGACCCTGATCGCAGAGCTGCTGAAG
CTCAGACTCGCTCTGGGAAGCACGCCAGTGCATCTAGGCGAATTTGGTAT
CGGACGTGAGAACTTCGCGGACAGAGATGCACCGATCGTTCACCTCTACT
ACCGCACAATCGCAAAGGCGGCTAGAGACGCATGCATTCCGCCCACCGTG
TGGGATGATGGCACCGGAAACGATTTTGAAATCACAAATTTCGACCGGGA
TGCAACTTTTGTAAACTTCACATTTGATTTGGCCGGCGAAGTGTTAGGCA
CCGCCACAACACCTCAAAGCGCTGCTCGTGCGTCTGGCATCCCTACACTA
AAATGA
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protein sequence of jgi.p|Trimin1|161725

>Trimin1|161725|e_gw1.18.122.1 ID=Trimin1|161725|e_gw1.18.122.1|Name=jgi.p|Trimin1|161725|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=352bp
MAVTAAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVR
IPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLTA
YDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTMCPCTPAAQ
QLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQG
KDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLK
LRLALGSTPVHLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTV
WDDGTGNDFEITNFDRDATFVNFTFDLAGEVLGTATTPQSAARASGIPTL
K*
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mRNA from alignment at Contig_18:905480..906535-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1382 ID=mRNA_1382|Name=jgi.p|Trimin1|161725|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1056bp|location=Sequence derived from alignment at Contig_18:905480..906535- (Tribonema minus UTEX_B_3156 )
ATGGCAGTGACTGCAGCAGAACTCTTTGCCACGTTGGGCACCGGAATCAA CCTGGGCAACACTTTAGACACTGCTCAACACAGCAGAGACACTTCAGTGA TTACAAGGCGGCTCACTGCCTTGCGAGAAAAGGGTTTTCGACACGTGCGT ATACCGGTCACATGGCAGCCTATGGGCTGCAGCACGAACAGAGTCAACTC GCCTTCATTTGTTGCGATGGTCGAAGGTGCTGTCGCTGCTGCCATTGAGC TAGGGTTTACGGTGATCTTGAACGCGCACCATGAGGCTTGGCTTACTGCA TATGATGCATCGCCTGCAATGAATGCAGCGTTTGCAGATCTGTGGCGCAA AATTTCACTCCACTTCAAGAGCGTTCCGCAAGACAAGCTCTTGTTCGAAT TGCTCAACGAACCGCAAGGCACAATGTGCCCTTGCACACCTGCCGCTCAA CAGCTCACACGCACGCTCAATGCGACAGGCTACAACGCAGTGCGGGCCGT ATCGCCGACTCGGATCATCCTCATACAGCCGAATAATTTGGGGGACGCTT GGGCGGCGCGTGCCACCTATCGAACACCGTCTCTCCTGCCTGGACAAGGA AAAGACAAATACTTAGCAGTAAGCGTTCATTCATATGGCCCTCCGCAATT CGCCTTGCCTAGTGGTAGCAATGCATACTTTTTGAACATGGCTGATCCAG AGGCTGCTGTATGCAAGCATGTCAAGACCCTGATCGCAGAGCTGCTGAAG CTCAGACTCGCTCTGGGAAGCACGCCAGTGCATCTAGGCGAATTTGGTAT CGGACGTGAGAACTTCGCGGACAGAGATGCACCGATCGTTCACCTCTACT ACCGCACAATCGCAAAGGCGGCTAGAGACGCATGCATTCCGCCCACCGTG TGGGATGATGGCACCGGAAACGATTTTGAAATCACAAATTTCGACCGGGA TGCAACTTTTGTAAACTTCACATTTGATTTGGCCGGCGAAGTGTTAGGCA CCGCCACAACACCTCAAAGCGCTGCTCGTGCGTCTGGCATCCCTACACTA AAATGA
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Coding sequence (CDS) from alignment at Contig_18:905480..906535-

>mRNA_1382 ID=mRNA_1382|Name=jgi.p|Trimin1|161725|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1056bp|location=Sequence derived from alignment at Contig_18:905480..906535- (Tribonema minus UTEX_B_3156 )
ATGGCAGTGACTGCAGCAGAACTCTTTGCCACGTTGGGCACCGGAATCAA
CCTGGGCAACACTTTAGACACTGCTCAACACAGCAGAGACACTTCAGTGA
TTACAAGGCGGCTCACTGCCTTGCGAGAAAAGGGTTTTCGACACGTGCGT
ATACCGGTCACATGGCAGCCTATGGGCTGCAGCACGAACAGAGTCAACTC
GCCTTCATTTGTTGCGATGGTCGAAGGTGCTGTCGCTGCTGCCATTGAGC
TAGGGTTTACGGTGATCTTGAACGCGCACCATGAGGCTTGGCTTACTGCA
TATGATGCATCGCCTGCAATGAATGCAGCGTTTGCAGATCTGTGGCGCAA
AATTTCACTCCACTTCAAGAGCGTTCCGCAAGACAAGCTCTTGTTCGAAT
TGCTCAACGAACCGCAAGGCACAATGTGCCCTTGCACACCTGCCGCTCAA
CAGCTCACACGCACGCTCAATGCGACAGGCTACAACGCAGTGCGGGCCGT
ATCGCCGACTCGGATCATCCTCATACAGCCGAATAATTTGGGGGACGCTT
GGGCGGCGCGTGCCACCTATCGAACACCGTCTCTCCTGCCTGGACAAGGA
AAAGACAAATACTTAGCAGTAAGCGTTCATTCATATGGCCCTCCGCAATT
CGCCTTGCCTAGTGGTAGCAATGCATACTTTTTGAACATGGCTGATCCAG
AGGCTGCTGTATGCAAGCATGTCAAGACCCTGATCGCAGAGCTGCTGAAG
CTCAGACTCGCTCTGGGAAGCACGCCAGTGCATCTAGGCGAATTTGGTAT
CGGACGTGAGAACTTCGCGGACAGAGATGCACCGATCGTTCACCTCTACT
ACCGCACAATCGCAAAGGCGGCTAGAGACGCATGCATTCCGCCCACCGTG
TGGGATGATGGCACCGGAAACGATTTTGAAATCACAAATTTCGACCGGGA
TGCAACTTTTGTAAACTTCACATTTGATTTGGCCGGCGAAGTGTTAGGCA
CCGCCACAACACCTCAAAGCGCTGCTCGTGCGTCTGGCATCCCTACACTA
AAATGA
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