Trimin1|353711|estExt_Genemark1.C_Ctg_1790005 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353711
Unique NameTrimin1|353711|estExt_Genemark1.C_Ctg_1790005
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length128
Homology
BLAST of jgi.p|Trimin1|353711 vs. uniprot
Match: A0A836CI76_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI76_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.240e-67
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
Query:    1 MRLASGSGDSNAPIGAVNGGGGEAFTAGDAGGNDADCSGDEYSIRSMSVDSDVESISQEVDEDGCHARKANNDAGDACSCGLXXXXXXXXXXXXXXXDSSNHCQPVRNLISEQESAVLAATHALASG 127
            MRLASGSGDSNAPIGAVNGGGGEAFTAGDAGGNDADCSGDEYSIRSMSVDSDVESISQEVDEDGCHARKANNDAGDACSCGLXXXXXXXXXXXXXXXDSSNHCQPVRNLISEQESAVLAATHALASG
Sbjct:    1 MRLASGSGDSNAPIGAVNGGGGEAFTAGDAGGNDADCSGDEYSIRSMSVDSDVESISQEVDEDGCHARKANNDAGDACSCGLXXXXXXXXXXXXXXXDSSNHCQPVRNLISEQESAVLAATHALASG 127          
BLAST of jgi.p|Trimin1|353711 vs. uniprot
Match: A0A835YW62_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW62_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.860e-31
Identity = 71/106 (66.98%), Postives = 76/106 (71.70%), Query Frame = 0
Query:    2 RLASGSGDSNAPIGAVNGGGGEAFTAGDAGGNDADCSGDEYSIRSMSVDSDVESISQEVDEDGCHARKANNDAGDACSCGLXXXXXXXXXXXXXXXDSSNHCQPVR 107
            R ASGS  SN P  AV GGGGEAFTAGDAGG+D DCSG EYSI SM VDSDVESISQ+V E+GC  RKANNDAGDACS GL               DSSN+C+PVR
Sbjct:  194 RAASGSVGSNVPTEAVTGGGGEAFTAGDAGGDDTDCSGHEYSIHSMGVDSDVESISQDVAENGCRERKANNDAGDACSSGLDAGDSRDAGSDVWLSDSSNNCKPVR 299          
BLAST of jgi.p|Trimin1|353711 vs. uniprot
Match: A0A836CJ94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ94_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.340e-30
Identity = 69/108 (63.89%), Postives = 77/108 (71.30%), Query Frame = 0
Query:    1 MRLASGSGDSNAPIGAVNGGGGEAFTAGDAGGNDADCSGDEYSIRSMSVDSDVESISQEVDEDGCHARKANNDAGDACSCG-LXXXXXXXXXXXXXXXDSSNHCQPVR 107
            MR ASGSGDSNAP GAVNGG GEAFTAGDA G D DCSG++YSI S+ V +DV S SQEVDE+ CH RKAN+DAG ACS G L               DSSN+C+PVR
Sbjct:   65 MRTASGSGDSNAPAGAVNGGEGEAFTAGDADGGDDDCSGNDYSIHSLDVGADVVSASQEVDENSCHERKANDDAGGACSGGGLNAGESSDAGDDAWDSDSSNNCKPVR 172          
BLAST of jgi.p|Trimin1|353711 vs. uniprot
Match: A0A835Z7P8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P8_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.450e-12
Identity = 34/60 (56.67%), Postives = 47/60 (78.33%), Query Frame = 0
Query:   22 GEAFTAGDAGGNDADCSGDEYSIRSMSVDSDVESISQEVDEDGCHARKANNDAGDACSCG 81
            GEA TAGDAGG+D DCSG++++I S+ VD++ +S+SQEV E+ CH  + + D GDACS G
Sbjct:  180 GEALTAGDAGGSDDDCSGNDHNIHSLDVDANHDSVSQEVAENSCHESETHTDTGDACSAG 239          
BLAST of jgi.p|Trimin1|353711 vs. uniprot
Match: A0A835Z6U3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6U3_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.840e-12
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 0
Query:   22 GEAFTAGDAGGNDADCSGDEYSIRSMSVDSDVESISQEVDEDGCHARKANNDAGDACSCG 81
            GEA TAGDAGG+D DCSGD++SI S+ VD++ +S+ QEV E+  H  + N DAG ACS G
Sbjct:   49 GEALTAGDAGGSDGDCSGDDHSIHSLDVDANHDSVGQEVAENSSHESETNTDAGGACSAG 108          
BLAST of jgi.p|Trimin1|353711 vs. uniprot
Match: A0A835YQW4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQW4_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.040e-8
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 0
Query:   32 GNDADCSGDEYSIRSMSVDSDVESISQEVDEDGCHARKANNDAGDACS 79
            G D DCSGDEYSI S+ VD+DV S+SQEV E+ CH  + N +AG  CS
Sbjct:  211 GGDDDCSGDEYSIHSLDVDADVNSVSQEVAENSCHESETNTNAGGTCS 258          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353711 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A836CI76_9STRA2.240e-67100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YW62_9STRA4.860e-3166.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJ94_9STRA1.340e-3063.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7P8_9STRA3.450e-1256.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z6U3_9STRA3.840e-1258.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQW4_9STRA2.040e-860.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_179contigContig_179:36548..38295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353711mRNA_15371Tribonema minus UTEX_B_3156 mRNAContig_179 36548..38295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353711|estExt_Genemark1.C_Ctg_1790005 ID=Trimin1|353711|estExt_Genemark1.C_Ctg_1790005|Name=jgi.p|Trimin1|353711|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=128bp
MRLASGSGDSNAPIGAVNGGGGEAFTAGDAGGNDADCSGDEYSIRSMSVD
SDVESISQEVDEDGCHARKANNDAGDACSCGLDAGDSRDAGSDASDSDSS
NHCQPVRNLISEQESAVLAATHALASG*
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