Trimin1|353705|estExt_Genemark1.C_Ctg_1780047 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353705
Unique NameTrimin1|353705|estExt_Genemark1.C_Ctg_1780047
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length776
Homology
BLAST of jgi.p|Trimin1|353705 vs. uniprot
Match: A0A836CJI5_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJI5_9STRA)

HSP 1 Score: 1230 bits (3183), Expect = 0.000e+0
Identity = 775/775 (100.00%), Postives = 775/775 (100.00%), Query Frame = 0
Query:    1 MLTVFTIMAGRSLLPKAGWSLSRAMHDTAAPTVRVALVDDINRRFAVPHHLLEDRTRRSIVELSLDGLFDDTHERPLSLPPGLVRLELKAFQARWPPHLERLVYWAKSEPEDAPPFLDTDRLPSTLKRLELNGCSVCTRVPRTLQTLRGSDDCKLMVWNAELSQRLETINSGHVNNIFGARFLPHKGNNEIVSCAADGQVRHTVISAATTRNLARHEGMAHRVVLDPLCPAALFTAGEDGRVYHFDMRTPGRKAQVFSMLDDPDPRHGVALFGLAAHPQQPYIFFGGESADLHMLDTRAAGESGXXXXXXXXXRARGAVFRPPADQLDLGDATVTGVAVNWCGSEALVTLNDGCVFRLDVSAGAQAGXXXXXXXXXXXXXXXXXXXXRARFAEHEGALGRYEGHRNKRGGDAQRVPRSLSAAVPRSCGEQRGDAAPAAAPVSFFGPRSEYVVSGSDCGHVFIWDTGTGALVNLLKATLSLLLLDTQRTHGDRVGAVNCLEPHPFLPVLATSGLEHDAKIWRPTAARPADARALTGWANVTAEKLCARNNAGRRGELRTRRARHHDRALASLLTFHASSAEERLMLQVLIARAAMGMEDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGIGGDGHDQHGGSSSSADGMDADSDSGFEEDIMGHMRAAASGEFGGNSSEDSDEVLSSAGSXXXXXXXXXXXIEDGSXXXXXXXXSELSDAGIE 775
            MLTVFTIMAGRSLLPKAGWSLSRAMHDTAAPTVRVALVDDINRRFAVPHHLLEDRTRRSIVELSLDGLFDDTHERPLSLPPGLVRLELKAFQARWPPHLERLVYWAKSEPEDAPPFLDTDRLPSTLKRLELNGCSVCTRVPRTLQTLRGSDDCKLMVWNAELSQRLETINSGHVNNIFGARFLPHKGNNEIVSCAADGQVRHTVISAATTRNLARHEGMAHRVVLDPLCPAALFTAGEDGRVYHFDMRTPGRKAQVFSMLDDPDPRHGVALFGLAAHPQQPYIFFGGESADLHMLDTRAAGESGXXXXXXXXXRARGAVFRPPADQLDLGDATVTGVAVNWCGSEALVTLNDGCVFRLDVSAGAQAGXXXXXXXXXXXXXXXXXXXXRARFAEHEGALGRYEGHRNKRGGDAQRVPRSLSAAVPRSCGEQRGDAAPAAAPVSFFGPRSEYVVSGSDCGHVFIWDTGTGALVNLLKATLSLLLLDTQRTHGDRVGAVNCLEPHPFLPVLATSGLEHDAKIWRPTAARPADARALTGWANVTAEKLCARNNAGRRGELRTRRARHHDRALASLLTFHASSAEERLMLQVLIARAAMGMEDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGIGGDGHDQHGGSSSSADGMDADSDSGFEEDIMGHMRAAASGEFGGNSSEDSDEVLSSAGSXXXXXXXXXXXIEDGSXXXXXXXXSELSDAGIE
Sbjct:    1 MLTVFTIMAGRSLLPKAGWSLSRAMHDTAAPTVRVALVDDINRRFAVPHHLLEDRTRRSIVELSLDGLFDDTHERPLSLPPGLVRLELKAFQARWPPHLERLVYWAKSEPEDAPPFLDTDRLPSTLKRLELNGCSVCTRVPRTLQTLRGSDDCKLMVWNAELSQRLETINSGHVNNIFGARFLPHKGNNEIVSCAADGQVRHTVISAATTRNLARHEGMAHRVVLDPLCPAALFTAGEDGRVYHFDMRTPGRKAQVFSMLDDPDPRHGVALFGLAAHPQQPYIFFGGESADLHMLDTRAAGESGXXXXXXXXXRARGAVFRPPADQLDLGDATVTGVAVNWCGSEALVTLNDGCVFRLDVSAGAQAGXXXXXXXXXXXXXXXXXXXXRARFAEHEGALGRYEGHRNKRGGDAQRVPRSLSAAVPRSCGEQRGDAAPAAAPVSFFGPRSEYVVSGSDCGHVFIWDTGTGALVNLLKATLSLLLLDTQRTHGDRVGAVNCLEPHPFLPVLATSGLEHDAKIWRPTAARPADARALTGWANVTAEKLCARNNAGRRGELRTRRARHHDRALASLLTFHASSAEERLMLQVLIARAAMGMEDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGIGGDGHDQHGGSSSSADGMDADSDSGFEEDIMGHMRAAASGEFGGNSSEDSDEVLSSAGSXXXXXXXXXXXIEDGSXXXXXXXXSELSDAGIE 775          
BLAST of jgi.p|Trimin1|353705 vs. uniprot
Match: D7FTN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN6_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 1.010e-52
Identity = 153/465 (32.90%), Postives = 198/465 (42.58%), Query Frame = 0
Query:  123 PSTLKRLELNG--------CSVCTRVPRTLQTLRGSDDCKLMVWNAELSQRLETINSGHVNNIFGARFLPHKGNNEIVSCAADGQVRHTVISAATTRNLARHEGMAHRVVLDPLCPAALFTAGEDGRVYHFDMRTPGRKAQVFSMLDDPDPRHGVALFGLAAHPQQPYIFFG-GESADLHMLDTRAAGESGXXXXXXXXXRARGAVFRPPADQLDLGDATVTGVAVNWCGSEALVTLN-DGCVFRLDVSAGAQAGXXXXXXXXXXXXXXXXXXXXRARFAEHEGAL--------------------------------------------------GRYEGHRNKRGGDAQRVPRSLSAAVPRSCGEQRGDAAPAAAPVSFFGPRSEYVVSGSDCGHVFIWDTGTGALVNLLKATLSLLLLDTQRTHGDRVGAVNCLEPHPFLPVLATSGLEHDAKIWRPTAARP 527
            P+TL+RLEL+G         +  +  P     + GSDD KLM+W+ E  +R  + +S H NN+F ARFLP+  N +IVSCAADGQVR T +S +T+  L  HEG AHR+ ++P  P    T GEDG V  FD+R P  +    ++L  P    G ++ G+A +P  P + F  G+S  L M D R A              +R               A +TGVAVNWCG+E + T N  G V+  DV   A  G                                                                                  R+ GHRN            L+                    V+F+GPRSE+VVSGSDCGH+F W        N   A L +LL       GD+VGAVNCLEPHP+LP LATSGL    K+WRP    P
Sbjct:  178 PNTLRRLELSGELRGHDGCVNTVSCSPDGKYWISGSDDLKLMIWDCESHKRKTSFHSRHQNNVFQARFLPYTDNEKIVSCAADGQVRLTNLSRSTSELLGEHEGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRAPLARNMGATLLRQPG---GRSISGMALNPADPNVLFVCGDSPYLDMFDARKADVPAARFCPRSRRGSR---------------AHITGVAVNWCGTEVVATYNPSGEVYLFDVKKHASRGTGSAPMWCPSIREGLLEQGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREPTYAARFTGHRNL-----------LTVKQ-----------------VTFYGPRSEFVVSGSDCGHIFFW--------NKSSAKLEMLLF------GDKVGAVNCLEPHPYLPALATSGLSKTVKVWRPPRITP 582          
BLAST of jgi.p|Trimin1|353705 vs. uniprot
Match: A0A6H5KJD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD8_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 1.790e-52
Identity = 163/507 (32.15%), Postives = 213/507 (42.01%), Query Frame = 0
Query:  123 PSTLKRLELNG--------CSVCTRVPRTLQTLRGSDDCKLMVWNAELSQRLETINSGHVNNIFGARFLPHKGNNEIVSCAADGQVRHTVISAATTRNLARHEGMAHRVVLDPLCPAALFTAGEDGRVYHFDMRTPGRKAQVFSMLDDPDPRHGVALFGLAAHPQQPYIFFG-GESADLHMLDTRAAGESGXXXXXXXXXRARGAVFRPPADQLDLGDATVTGVAVNWCGSEALVTLN-DGCVFRLDVSAGAQAGXXXXXXXXXXXXXXXXXXXXRARFAEHEGALGRYEGHRNKRGGDAQRVPRSLSAAVPRSCGEQ------------------------------------------------------------RGDAAPAAA-----------PVSFFGPRSEYVVSGSDCGHVFIWDTGTGALVNLLKATLSLLLLDTQRTHGDRVGAVNCLEPHPFLPVLATSGLEHDAKIWRPTAARPADARALTGWANVTAEKLCARN 548
            P TL+RLEL+G         +  +  P     + GSDD KLM+W+ E  +R  + +S H NN+F ARFLP+  N +IVSCAADGQVR T +S +T+  L  HEG AHR+ ++P  P    T GEDG V  FD+R P  +    ++L  P    G ++ G+A +P  P + F  G+S  L M D R                +R               A +TGVAVNWCGSE + T N  G V+  DV   A  G                    R   +             +    +  R  R +S A+     EQ                                                            R +   AA             V+F+GPRSE+VVSGSDCGH+F W        N   A L +LL       GD+VGAVNCLEPHP+LP LATSGL    K+WRPT   P     L G    +A ++ A N
Sbjct:  176 PITLRRLELSGELRGHEGCVNTVSCSPDGKYWISGSDDLKLMIWDCESHKRKTSFHSRHRNNVFQARFLPYTDNEKIVSCAADGQVRLTNLSRSTSELLGEHEGRAHRLAIEPGSPHRFMTCGEDGVVLSFDLRAPVARNMGSTLLRQPG---GRSISGMALNPADPNVLFVCGDSPYLDMFDARKVDVPAARFCPRSRRGSR---------------AHITGVAVNWCGSEVVATYNPSGEVYLFDVKKHASRGMGSNSMWWSGGPSAHQRRMERGEHSSDSXXXXSIGS--SSISPEPPRSRRRISPAIREGLHEQGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHDVGGRDXXXXXXXXXXXXXXXXXXXXRREPTYAARFTGHRNLLTVKQVTFYGPRSEFVVSGSDCGHIFFW--------NKASAKLEMLLF------GDKVGAVNCLEPHPYLPALATSGLSRTVKVWRPTRFTPVGE--LVGKGGKSAAEIAADN 646          
BLAST of jgi.p|Trimin1|353705 vs. uniprot
Match: K8YSZ9_NANGC (Nuclear distribution protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSZ9_NANGC)

HSP 1 Score: 190 bits (483), Expect = 2.550e-48
Identity = 163/465 (35.05%), Postives = 201/465 (43.23%), Query Frame = 0
Query:  149 GSDDCKLMVWNAELSQRLETINSGHVNNIFGARFLPHKGNNEIVSCAADGQVRHTVIS-----------------AATTRNLARHEGMAHRVVLDPLCPAALFTAGEDGRVYHFDMRTPGRKAQVFSMLDDPDPRHGVALFGLAAHPQQPYIFF-GGESADLHMLDTRAAGESGXXXXXXXXXRARGAVFRPPADQLDLGDAT------VTGVAVNWCGSEALVTLNDGCV--FRLDVSA---GAQAGXXXXXXXXXXXXXXXXXXXXRA--RFAEHEGALGRYEGHR---NKRGGDAQRV-PRSLSAAVPRSCGEQ--------RGDAAP-----------------AAAPVSFFGPRSEYVVSGSDCGHVFIWDTGTGALVNLLKATLSLLLLDTQRTHGDRVGAVNCLEPHPFLPVLATSGLEHDAKIWRPTAARPADARALTGWANVTAEKLCARNNAGRR 553
            GSDD  LM+WN    +      SGH  NIF ARFLPH  N E+VS AADGQVR   ++                 +  ++ LARH G AHR+ +      +  T GEDGRV  FD R   ++  +     + D    + L+ L+  P   + F  GG S  +H  D R   E             R A F    D+     A       +TG A NW G E L T ND CV  FR+D  A   GA+ G                    RA  R   H G     E  +   + R GD+  + P S + + P+    Q        RGD                        V+FFG RSEYVVSG D GH+F+W+T +G L  LL              +GDR GAVNCLE HP LPVLATSGLEHD KIWRPT        AL       AEKL  RN   R+
Sbjct:   33 GSDDTYLMLWNVAAHECRMKHLSGHQGNIFCARFLPHTNNTEVVSVAADGQVRWNSLARPSSLLHCPWIVLTLPLSGISKQLARHNGRAHRLAVTET--TSFLTCGEDGRVLGFDTRDAHKRHLLTVTTPEDDV---IPLYALSCSPVDGHSFVVGGTSVYMHHYDARHVREP----------VGRYAPFHLRDDKDGASKARKLVSDHITGTAFNWNGREVLATYNDECVYLFRVDRDAARGGAEGGGEQVPWESSQDGLVSDHGEERAEHRRPSHMGPREAEEDGQEDASPRAGDSPALHPCSAAYSNPQKRMRQQTSTRQTMRGDVLEEKLRGYTQVFRGHRNDHTVKQVNFFGARSEYVVSGCDTGHIFMWETQSGELAQLL--------------YGDRRGAVNCLETHPNLPVLATSGLEHDVKIWRPTRGLSVRKGALKAHGGEMAEKLAERNEKERK 468          
BLAST of jgi.p|Trimin1|353705 vs. uniprot
Match: UPI000F55208E (DDB1- and CUL4-associated factor 8-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F55208E)

HSP 1 Score: 179 bits (453), Expect = 2.560e-45
Identity = 125/402 (31.09%), Postives = 189/402 (47.01%), Query Frame = 0
Query:  149 GSDDCKLMVWNAELSQRLETINSGHVNNIFGARFLPHKGNNEIVSCAADGQVRHTVISAAT-----TRNLARHEGMAHRVVLDPLCPAALFTAGEDGRVYHFDMRTPGRKAQVFSMLDDPDPRHGVALFGLAAHPQQPYIF-FGGESADLHMLDTRAAGESGXXXXXXXXXRARGAVFRPPADQLDLGD--ATVTGVAVNWCGSEALVTLNDGCVFRLDVSAGAQAGXXXXXXXXXXXXXXXXXXXXRARFAEHEGALGRYEGHRNKRGGDAQRVPRSLSAAVPRSCGEQRGDAAPAAAPVSFFGPRSEYVVSGSDCGHVFIWDTGTGALVNLLKATLSLLLLDTQRTHGDRVGAVNCLEPHPFLPVLATSGLEHDAKIWRPTAARPADARALTGWANVTAE 542
            GSDD ++++W+    ++     SGH +N+F A+F+P+ G++ IVSCA DG+VR   + +++     T+ LA+H+G AH++ ++P  P    T GEDG ++H D+R   +  ++F    +   R  V L+ +  +P   Y F  GG      + D R   +                    P   +   D  A +T +  ++ G+E LV+ ND  ++  D  + ++A                               +  Y+GHRN             +A V       +G        V+F+GP+SEY+VSGSDCGH+F+WD  T  +V  L+              GD  G VNCLEPHPF P+LATSGL+HD KIW PTA  P     L G  NV  E
Sbjct:   68 GSDDLEIVIWDWAKGKKKIAYQSGHSSNVFQAKFMPYTGDSTIVSCARDGKVRVGFLHSSSDVCKNTKCLAQHKGAAHKLCIEPGSPCEFLTCGEDGVIFHADLRED-KAHKLFCCRVEEHRR--VPLYTIFINPLNNYEFAVGGRDQFARIYDRRKLPDDSKASVEPVKQYC-------PHHLMGSNDIFANITCLVYSYDGTELLVSYNDENIYLFDSYSSSEAEY-----------------------------IKTYKGHRN-------------NATV-------KG--------VNFYGPQSEYIVSGSDCGHIFLWDKETEEVVQFLE--------------GDNTGVVNCLEPHPFAPILATSGLDHDVKIWLPTAEEPTS---LDGLKNVIKE 385          
BLAST of jgi.p|Trimin1|353705 vs. uniprot
Match: A0A8C3YVI3_9CETA (Uncharacterized protein n=1 Tax=Catagonus wagneri TaxID=51154 RepID=A0A8C3YVI3_9CETA)

HSP 1 Score: 180 bits (457), Expect = 1.080e-44
Identity = 131/399 (32.83%), Postives = 189/399 (47.37%), Query Frame = 0
Query:  150 SDDCKLMVWNAELSQRLETINSGHVNNIFGARFLPHKGNNEIVSCAADGQVRHTVISAA----TTRNLARHEGMAHRVVLDPLCPAALFTAGEDGRVYHFDMRTPGRKAQVFSMLDDPDPRHGVALFGLAAHPQQPYIF-FGGESADLHMLDTRAAGESGXXXXXXXXXRARGAVFRPPADQLDLGD--ATVTGVAVNWCGSEALVTLNDGCVFRLDVSA--GAQAGXXXXXXXXXXXXXXXXXXXXRARFAEHEGALGRYEGHRNKRGGDAQRVPRSLSAAVPRSCGEQRGDAAPAAAPVSFFGPRSEYVVSGSDCGHVFIWDTGTGALVNLLKATLSLLLLDTQRTHGDRVGAVNCLEPHPFLPVLATSGLEHDAKIWRPTAARPADARALTGWANV 539
            SDD K+++W+    Q +    SGH+NN+F A+FLP+ G+  +  CA DGQVR   +S       T+ +A+H G AHR+ L P  P    T+GED  V+  D+R  GR A    +  D + +  V L+ +  +P   Y F  GG+   + + D R   E+             G + +     L   D  A +TG+  +  G+E L + ND  ++  D S   GAQ                                + RY+GHRN             +A V       +G        V+F+GPRSE+VVSGSDCGH+F+W+  +  ++  ++              GD+ G +NCLEPHP+LPV+ATSGL+HDAKIW PTA        LTG  NV
Sbjct:  219 SDDLKVILWDWMRQQPVLVFESGHINNVFQAKFLPNCGDPTLAMCARDGQVRIAQLSVLPHCKNTKRVAQHRGAAHRLALVPDSPFKFLTSGEDAVVFAIDLRQ-GRPASRVVITKDKEKK--VGLYTVCVNPANTYQFAVGGQDQFVRIYDQRKIDEN----------ENNGVLKKFCPHHLVNCDSKANITGLVYSHDGTELLASYNDEDIYLFDSSHCDGAQY-------------------------------VKRYKGHRN-------------NATV-------KG--------VNFYGPRSEFVVSGSDCGHIFLWEKSSCQIIQFME--------------GDKGGTINCLEPHPYLPVMATSGLDHDAKIWAPTAKTTTG---LTGLKNV 528          
BLAST of jgi.p|Trimin1|353705 vs. uniprot
Match: A0A6P5UFQ9_DROOB (DDB1- and CUL4-associated factor 8 isoform X1 n=4 Tax=Drosophila obscura TaxID=7282 RepID=A0A6P5UFQ9_DROOB)

HSP 1 Score: 180 bits (457), Expect = 9.200e-44
Identity = 132/402 (32.84%), Postives = 175/402 (43.53%), Query Frame = 0
Query:  132 NGCSVCTRVPRTLQTL-RGSDDCKLMVWNAELSQRLETINSGHVNNIFGARFLPHKGNNEIVSCAADGQVRHTVI--SAATTR--NLARHEGMAHRVVLDPLCPAALFTAGEDGRVYHFDMRTP-GRKAQVFSMLDDPDPRHGVALFGLAAHPQQPYIFFGGESADLHMLDTRAAGESGXXXXXXXXXRARGAVFRPPADQLDLGDATVTGVAVNWCGSEALVTLNDGCVFRLDVSAGAQAGXXXXXXXXXXXXXXXXXXXXRARFAEHEGALGRYEGHRNKRGGDAQRVPRSLSAAVPRSCGEQRGDAAPAAAPVSFFGPRSEYVVSGSDCGHVFIWDTGTGALVNLLKATLSLLLLDTQRTHGDRVGAVNCLEPHPFLPVLATSGLEHDAKIWRPTAARP 527
            NGC  C    R    L  GSDD +++VW+   ++ L +  SGH  NIF  +F+   G  +IVS + DGQVR  VI  S   T+   L  H    H++V+ P     + +AGEDG V HFD+RT       +     +P+ R  V LF ++ HP  P     G   +L + D R   E                    P    +     VT    N  GSE L + +D  +F  D                             +R  +    L  YEGH N R                      +G        V+FFGPRSEYV+SGSDCGH+F WD  T +++N +K              GD  G VNCLEPHP++PVLATSGLEH+ KIW P A+ P
Sbjct:  353 NGCVNCLNFNRAGDLLCSGSDDTRIIVWDWANNKPLHSFKSGHHTNIFQTKFIDSAGCLDIVSTSRDGQVRRAVIPPSGGDTKPTRLYTHSDAVHKLVVVPHTKHEVMSAGEDGAVKHFDLRTSTSANTMLRCNYTEPERRSRVRLFSISHHPFAPEFCVSGADDNLRVYDKRKLPEP--------------IHEMTPRGVRETKITQVTCAVYNHSGSEILASYSDAGIFLYD-----------------------------SRNYKEGETLHCYEGHVNHR--------------------TIKG--------VNFFGPRSEYVISGSDCGHIFFWDRNTESIINYMK--------------GDIAGVVNCLEPHPWMPVLATSGLEHNVKIWTPHASDP 669          
BLAST of jgi.p|Trimin1|353705 vs. uniprot
Match: A0A5N3XEA7_MUNRE (Uncharacterized protein n=4 Tax=Cervidae TaxID=9850 RepID=A0A5N3XEA7_MUNRE)

HSP 1 Score: 176 bits (445), Expect = 3.300e-43
Identity = 134/415 (32.29%), Postives = 190/415 (45.78%), Query Frame = 0
Query:  132 NGCSVCTRV-PRTLQTLRGSDDCKLMVWNAELSQRLETINSGHVNNIFGARFLPHKGNNEIVSCAADGQVRHTVISAAT----TRNLARHEGMAHRVVLDPLCPAALFTAGEDGRVYHFDMRTPGRKAQVFSMLDDPDPRHGVALFGLAAHPQQPYIF-FGGESADLHMLDTRAAGESGXXXXXXXXXRARGAVFRPPADQLDL-GDATVTGVAVNWCGSEALVTLNDGCVFRLDVSAGAQAGXXXXXXXXXXXXXXXXXXXXRARFAEHEGALGRYEGHRNKRGGDAQRVPRSLSAAVPRSCGEQRGDAAPAAAPVSFFGPRSEYVVSGSDCGHVFIWDTGTGALVNLLKATLSLLLLDTQRTHGDRVGAVNCLEPHPFLPVLATSGLEHDAKIWRPTAARPADARALTGWANV 539
            NGC        R  +    SDD K+++W+    Q ++   SGH NN+F A+FLPH G+  +  C  DGQ+R   +SA      TR +A+H G +H++ LDP  P    T+GED  V+  D+R  GR A    +  +   R  V LF +  +P   Y F  GG    + + D R   +S                   P   L+    A +T +A +  G+E LV+ ND  ++  + S G  A                               + RY+GHRN             +A V       +G        V+F+GPRSE+V+SGSDCGH+F W+  +  +V  ++              GD+ G +NCLEPHP+LPV+ATSGL+HDAKIW PTA    D   L G  NV
Sbjct:  186 NGCVNTVHFNQRGTRLATSSDDLKVILWDWVHQQPVQEFESGHRNNVFQAKFLPHCGDTILAMCGRDGQIRIAELSALPHREITRCVAQHRGASHKLGLDPDSPFKFLTSGEDAVVFAIDLRQ-GRPASKVVVTREKKKR--VGLFSIYVNPANNYHFAVGGRDQFVRIYDQRKINKSDNNGVLKKFC---------PHHLLNCDAKAYITCLAYSHNGTELLVSYNDEDIYLFNSSHGDGAQY-----------------------------VKRYKGHRN-------------NATV-------KG--------VNFYGPRSEFVMSGSDCGHIFFWEKSSCQIVQYME--------------GDKGGTINCLEPHPYLPVMATSGLDHDAKIWVPTAKVITD---LAGLKNV 514          
BLAST of jgi.p|Trimin1|353705 vs. uniprot
Match: UPI00109BD82A (DDB1- and CUL4-associated factor 8 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BD82A)

HSP 1 Score: 174 bits (441), Expect = 3.460e-43
Identity = 123/389 (31.62%), Postives = 176/389 (45.24%), Query Frame = 0
Query:  149 GSDDCKLMVWNAELSQRLETINSGHVNNIFGARFLPHKGNNEIVSCAADGQVRHTVISA----ATTRNLARHEGMAHRVVLDPLCPAALFTAGEDGRVYHFDMRTPGRKAQVFSMLDDPDPRHGVALFGLAAHPQQPYIF-FGGESADLHMLDTRAAGESGXXXXXXXXXRARGAVFRPPADQLDLGD---ATVTGVAVNWCGSEALVTLNDGCVFRLDVSAGAQAGXXXXXXXXXXXXXXXXXXXXRARFAEHEGALGRYEGHRNKRGGDAQRVPRSLSAAVPRSCGEQRGDAAPAAAPVSFFGPRSEYVVSGSDCGHVFIWDTGTGALVNLLKATLSLLLLDTQRTHGDRVGAVNCLEPHPFLPVLATSGLEHDAKIWRPTAARPAD 529
            GSDD  + +W+   ++++   +SGH +N+F A+F+P   ++ +V+CA DGQVR  V+S+      TR LA H G AH++ ++P  P    T GEDG +Y  DMR        F    +      VAL+ +   P     F  GG      + D R A E                    P    D+ +     +T +  ++ G+E LV+ ND  ++  D  + ++A                               + RY GHRN             +A V       +G        V+FFGPRSE+VVSGSDCGHVF+WD  T  + N +K              GD+ G VNCLEPHP   +LATSGL+H+ KIW P A+ P D
Sbjct:  117 GSDDLDIAIWDWAKNKKVLHYDSGHSSNVFQAKFMPFSNDSTVVTCARDGQVRAGVLSSDGTVKDTRLLAHHRGAAHKLSIEPGSPWLFLTCGEDGVIYQVDMREDKANKLFFCRASE---HKKVALYTIFIDPSNVNEFAVGGRDHYARVYDRRKAPEGCKAFVEPLKKYC-------PHHLKDISNDYFTNITCLVYSYDGTELLVSYNDEDIYLFDTYSSSEAEY-----------------------------IRRYTGHRN-------------NATV-------KG--------VNFFGPRSEFVVSGSDCGHVFLWDKETENVANYMK--------------GDQTGVVNCLEPHPLASILATSGLDHNVKIWAPLASEPND 424          
BLAST of jgi.p|Trimin1|353705 vs. uniprot
Match: A0A176WUL0_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WUL0_MARPO)

HSP 1 Score: 176 bits (447), Expect = 6.050e-43
Identity = 138/401 (34.41%), Postives = 183/401 (45.64%), Query Frame = 0
Query:  150 SDDCKLMVWNAELSQRLETINSGHVNNIFGARFLPHKGNNEIVSCAADGQVRHTVISAA---TTRNLARHEGMAHRVVLDPLCPAALFTAGEDGRVYHFDMR-----------TPGRKAQVFSMLDDPDPRHGVALFGLAAHPQQPYIF-FGGESADLHMLDTRAAGESGXXXXXXXXXRARGAVFRPPADQLDLGDATVTGVAVNWCGSEALV-TLNDGCVFRLDVSAGAQAGXXXXXXXXXXXXXXXXXXXXRARFAEHEGALGRYEGHRNKRGGDAQRVPRSLSAAVPRSCGEQRGDAAPAAAPVSFFGPRSEYVVSGSDCGHVFIWDTGTGALVNLLKATLSLLLLDTQRTHGDRVGAVNCLEPHPFLPVLATSGLEHDAKIWRPTAAR----PADA 530
            SDD ++++W+   + R  +  SGH  N+F AR +P   +  IVSCAADGQVRH  IS     TT+ LA+H G AH++ ++P  P   F+ GEDG V HFD+R           TPGRK +    +        V L  +A +P+ P+ F  GG      + D R     G                  PA  +  GD TV    V +   E L+ + ND  V+  D   G                                  L   + HR+  GG+  + P+ L     R+    +G        V+FFGP +EYVVSGSDCG ++IW    G LVN+L              HGD    VNCLEPHPF+ VLATSG+E D KIW PT+ R    PADA
Sbjct:  263 SDDTEIVIWDWAANIRKLSYPSGHHQNVFQARIMPFSDDRSIVSCAADGQVRHGEISETGRVTTKKLAKHRGRAHKLAIEPGSPRTFFSCGEDGVVQHFDLREEKSTKLFTCNTPGRKHRRSKSV--------VRLNTIAINPRNPHYFAIGGSDEYARVYDIRKVAMDGADVQPVDCFS--------PAHLV--GDDTVHITCVAYSQQEELLASYNDELVYLFDKDMGMGPDP-----------------------------LTWQKEHRHG-GGEPIQDPKPLVFVGHRNSKTVKG--------VNFFGPNTEYVVSGSDCGWIYIWRKRDGKLVNML--------------HGD-AQVVNCLEPHPFITVLATSGIERDVKIWTPTSDRLGSLPADA 592          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353705 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJI5_9STRA0.000e+0100.00WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
D7FTN6_ECTSI1.010e-5232.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJD8_9PHAE1.790e-5232.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K8YSZ9_NANGC2.550e-4835.05Nuclear distribution protein n=3 Tax=Monodopsidace... [more]
UPI000F55208E2.560e-4531.09DDB1- and CUL4-associated factor 8-like n=1 Tax=Po... [more]
A0A8C3YVI3_9CETA1.080e-4432.83Uncharacterized protein n=1 Tax=Catagonus wagneri ... [more]
A0A6P5UFQ9_DROOB9.200e-4432.84DDB1- and CUL4-associated factor 8 isoform X1 n=4 ... [more]
A0A5N3XEA7_MUNRE3.300e-4332.29Uncharacterized protein n=4 Tax=Cervidae TaxID=985... [more]
UPI00109BD82A3.460e-4331.62DDB1- and CUL4-associated factor 8 n=2 Tax=Exaipta... [more]
A0A176WUL0_MARPO6.050e-4334.41Uncharacterized protein n=2 Tax=Marchantia polymor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 206..246
e-value: 9.1
score: 10.9
coord: 343..464
e-value: 87.0
score: 4.8
coord: 163..204
e-value: 6.7
score: 11.8
coord: 479..521
e-value: 3.5
score: 13.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 323..532
e-value: 4.7E-9
score: 37.9
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 118..299
e-value: 1.1E-12
score: 49.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 652..679
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 726..745
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 596..775
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..412
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..417
NoneNo IPR availablePANTHERPTHR15574:SF21DDB1- AND CUL4-ASSOCIATED FACTOR 8-RELATEDcoord: 148..614
IPR045151DDB1- and CUL4-associated factor 8-likePANTHERPTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYcoord: 148..614
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 149..521

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_178contigContig_178:276327..284514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353705mRNA_14296Tribonema minus UTEX_B_3156 mRNAContig_178 275619..284514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353705|estExt_Genemark1.C_Ctg_1780047 ID=Trimin1|353705|estExt_Genemark1.C_Ctg_1780047|Name=jgi.p|Trimin1|353705|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=776bp
MLTVFTIMAGRSLLPKAGWSLSRAMHDTAAPTVRVALVDDINRRFAVPHH
LLEDRTRRSIVELSLDGLFDDTHERPLSLPPGLVRLELKAFQARWPPHLE
RLVYWAKSEPEDAPPFLDTDRLPSTLKRLELNGCSVCTRVPRTLQTLRGS
DDCKLMVWNAELSQRLETINSGHVNNIFGARFLPHKGNNEIVSCAADGQV
RHTVISAATTRNLARHEGMAHRVVLDPLCPAALFTAGEDGRVYHFDMRTP
GRKAQVFSMLDDPDPRHGVALFGLAAHPQQPYIFFGGESADLHMLDTRAA
GESGGGGAAAAAARARGAVFRPPADQLDLGDATVTGVAVNWCGSEALVTL
NDGCVFRLDVSAGAQAGGAGGGGGGAAEGAGGGGGRRRARFAEHEGALGR
YEGHRNKRGGDAQRVPRSLSAAVPRSCGEQRGDAAPAAAPVSFFGPRSEY
VVSGSDCGHVFIWDTGTGALVNLLKATLSLLLLDTQRTHGDRVGAVNCLE
PHPFLPVLATSGLEHDAKIWRPTAARPADARALTGWANVTAEKLCARNNA
GRRGELRTRRARHHDRALASLLTFHASSAEERLMLQVLIARAAMGMEDSD
DDDSDGNGGGGGGARGGGGAGDGEEGSSDGGGGGRGGGRRGGGGSAGALS
DSVAFMDSSSEDGGGGDGSSSSSSSSDDDGEGIGGDGHDQHGGSSSSADG
MDADSDSGFEEDIMGHMRAAASGEFGGNSSEDSDEVLSSAGSGGGASGSG
GGGIEDGSGASDSDSDSELSDAGIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR045151DCAF8
IPR036322WD40_repeat_dom_sf