Trimin1|353701|estExt_Genemark1.C_Ctg_1780040 (polypeptide) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353701 vs. uniprot
Match: A0A835Z4S1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S1_9STRA) HSP 1 Score: 413 bits (1061), Expect = 5.560e-145 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
Query: 1 MPPHRAPPLSGPPRDAATCVLSITFSQQLQLSARDVTGAFRKKARAAERERWARIDHGDAAVAHETARGQEAATVALGLWRDGSETAMSACARNFSQALADALAARGAHRVSMWDERFSSVEAQSRLARHRGNHDVDAVAACAILEHYFEEGGEGAEVVAASANVSECVDKYGGEAAAAVQPENRLGEMLRMRGEARREGGXXXXXXXXXXXXXXTRAKPKRQPKKRQRGQSLL 234
MPPHRAPPLSGPPRDAATCVLSITFSQQLQLSARDVTGAFRKKARAAERERWARIDHGDAAVAHETARGQEAATVALGLWRDGSETAMSACARNFSQALADALAARGAHRVSMWDERFSSVEAQSRLARHRGNHDVDAVAACAILEHYFEEGGEGAEVVAASANVSECVDKYGGEAAAAVQPENRLGEMLRMRGEARREGGXXXXXXXXXXXXXXTRAKPKRQPKKRQRGQSLL
Sbjct: 1 MPPHRAPPLSGPPRDAATCVLSITFSQQLQLSARDVTGAFRKKARAAERERWARIDHGDAAVAHETARGQEAATVALGLWRDGSETAMSACARNFSQALADALAARGAHRVSMWDERFSSVEAQSRLARHRGNHDVDAVAACAILEHYFEEGGEGAEVVAASANVSECVDKYGGEAAAAVQPENRLGEMLRMRGEARREGGXXXXXXXXXXXXXXTRAKPKRQPKKRQRGQSLL 234
BLAST of jgi.p|Trimin1|353701 vs. uniprot
Match: A0A7S2V363_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V363_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.120e-9 Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 0
Query: 71 EAATVALGLWRDGSETAMSACARNFSQALADALAARGAHRVSMWDERFSSVEAQSRLARHRGNHD-----VDAVAACAILEHYFEEGGEGAEVV 159
+A V + L R G ET S RNFSQ LAD ++ + V +WDE F+S +A++RL R G D +DAV+AC +LE YF++GG GAE+V
Sbjct: 175 QAVVVGVPLDRVGGETNQSLINRNFSQDLADLISPQVP--VYLWDEAFTSYDAEARL-RANGQGDTVGFQLDAVSACVLLEDYFDQGGFGAELV 265
BLAST of jgi.p|Trimin1|353701 vs. uniprot
Match: A0A8J2T1I1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1I1_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 8.100e-8 Identity = 45/102 (44.12%), Postives = 61/102 (59.80%), Query Frame = 0
Query: 59 DAAVAH--ETARGQEAATVALGL--WRDGSETAMSACARNFSQALADALAARGAHRVSMWDERFSSVEAQSRLARHRGNHDVDAVAACAILEHYFEEGGEGA 156
DA VA + AR + A++ +GL +DG+E A R F+ ALA AA A + +WDERFSS EA++ LA HR +DAVAAC IL+ +F +GA
Sbjct: 111 DAVVARLLQIARRERIASIVVGLPLEKDGAEGLQCAATRRFADALA---AAAPATPLVLWDERFSSREAEALLA-HRPGAALDAVAACVILDDFFASADDGA 208
BLAST of jgi.p|Trimin1|353701 vs. uniprot
Match: A0A7Y3J5L8_9GAMM (Putative pre-16S rRNA nuclease n=1 Tax=Steroidobacteraceae bacterium TaxID=2689616 RepID=A0A7Y3J5L8_9GAMM) HSP 1 Score: 57.8 bits (138), Expect = 5.570e-7 Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 0
Query: 82 DGSETAMSACARNFSQALADALAARGAHRVSMWDERFSSVEAQSRLARHRGNH---------DVDAVAACAILEHYFEEGG 153
DGSE+ ++ AR F+ LAD R RV + DER+SS+EA +RL + R N DVDA AAC I+E +F+E G
Sbjct: 74 DGSESVLAREARAFAAELAD----RSRVRVHLIDERYSSIEAAARLRQSRQNGVRRRRVAKGDVDAAAACVIMERWFDEAG 150
BLAST of jgi.p|Trimin1|353701 vs. uniprot
Match: A0A0M9UCW6_9CHLR (Putative pre-16S rRNA nuclease n=2 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0M9UCW6_9CHLR) HSP 1 Score: 57.4 bits (137), Expect = 6.730e-7 Identity = 42/102 (41.18%), Postives = 58/102 (56.86%), Query Frame = 0
Query: 65 ETARGQEAATVALGLW--RDGSETAMSACARNFSQALADALAARGAHRVSMWDERFSSVEAQSRL-----ARHRGNHDVDAVAACAILEHYFEEGGEGAEVV 159
E AR ++AA + +GL DGSE +A R F A+ LAA+ V +WDER++S +AQ ++ + +DAVAA +LEHYFE G GAE V
Sbjct: 38 ELARAEQAAKIIVGLPLNTDGSEGEQAAQCRAF----AEVLAAQTDIPVYLWDERYTSKDAQQQMIAAGTTQKARREKLDAVAAAVMLEHYFEHQGVGAERV 135
BLAST of jgi.p|Trimin1|353701 vs. uniprot
Match: A0A7S3Q5C8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5C8_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 3.890e-5 Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query: 67 ARGQEAATVALGL--WRDGSETAMSACARNFSQALADALAAR---GAHRVSMWDERFSSVEAQSRL--ARHRGN--HDVDAVAACAILEHYFEEGGEGAE 157
A +EA + +GL ++G+E + RNF+ L A A+ A + MWDER++S EA +R+ A R N ++DA AAC ILE+Y+++ G GAE
Sbjct: 196 ATAEEATQIVVGLPFHKNGTEAEQTIITRNFTHHLFYATYAQFGPDAMPIYMWDERYTSKEAAARIRAANPRANLYKELDAEAACIILEYYYKDDGLGAE 295
BLAST of jgi.p|Trimin1|353701 vs. uniprot
Match: B8CG17_THAPS (YqgFc domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG17_THAPS) HSP 1 Score: 54.3 bits (129), Expect = 5.570e-5 Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = 0
Query: 77 LGLWRDGSETAMSACARNFSQALADALAARGAHR--VSMWDERFSSVEAQSRL-----ARHRG-------NHDVDAVAACAILEHYFEEGGEGAEVVAASANVSE-CVDKY 172
L L ++GS + S R F L + R + V++WDER++S EA SR+ AR+R N +D AAC ILEHY++ G+ AEV+A + +V C++ Y
Sbjct: 254 LPLHKNGSISEQSLITRQFGYELLQTVRTRMGYNANVTLWDERYTSKEAASRIVGEAIARNRRIPSASDLNGALDDEAACIILEHYYQALGQDAEVLALNIDVERTCLEMY 364
BLAST of jgi.p|Trimin1|353701 vs. uniprot
Match: A0A2G6EDE3_9GAMM (Putative pre-16S rRNA nuclease n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2G6EDE3_9GAMM) HSP 1 Score: 51.6 bits (122), Expect = 9.440e-5 Identity = 40/85 (47.06%), Postives = 47/85 (55.29%), Query Frame = 0
Query: 75 VALGLWRDGSETAMSACARNFSQALADALAARGAHRVSMWDERFSSVEAQSRLA--RHRGNH-------DVDAVAACAILEHYFE 150
V L L RDGSE+ + A R F++ L R V DERFSSVEAQ R+A R RG DVDAVAA +LE YF+
Sbjct: 57 VGLPLERDGSESPLCAHVRGFAKRLRS----RFELPVVEVDERFSSVEAQHRIAAMRRRGQKTRRATHADVDAVAAALLLERYFD 137 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353701 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 8
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|353701|estExt_Genemark1.C_Ctg_1780040 ID=Trimin1|353701|estExt_Genemark1.C_Ctg_1780040|Name=jgi.p|Trimin1|353701|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=235bpback to top |