Trimin1|353686|estExt_Genemark1.C_Ctg_1780017 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353686
Unique NameTrimin1|353686|estExt_Genemark1.C_Ctg_1780017
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length89
Homology
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BLAST of jgi.p|Trimin1|353686 vs. uniprot
Match: A0A835Z9X6_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X6_9STRA)

HSP 1 Score: 179 bits (454), Expect = 3.590e-57
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 
Query:    1 MPTQTLPGIIIVGAAVGLAGAILGGVHRLSTGEWRMSGRTKWDFDCANRDKRVRAWQKQIDKQLADQAKDPAAAEALSYYPIAHEDYE 88
            MPTQTLPGIIIVGAAVGLAGAILGGVHRLSTGEWRMSGRTKWDFDCANRDKRVRAWQKQIDKQLADQAKDPAAAEALSYYPIAHEDYE
Sbjct:    1 MPTQTLPGIIIVGAAVGLAGAILGGVHRLSTGEWRMSGRTKWDFDCANRDKRVRAWQKQIDKQLADQAKDPAAAEALSYYPIAHEDYE 88
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353686 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z9X6_9STRA3.590e-57100.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017384NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1PFAMPF15879MWFEcoord: 2..53
e-value: 2.6E-6
score: 27.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_178contigContig_178:107007..107364 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353686mRNA_14261Tribonema minus UTEX_B_3156 mRNAContig_178 107007..107703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353686|estExt_Genemark1.C_Ctg_1780017 ID=Trimin1|353686|estExt_Genemark1.C_Ctg_1780017|Name=jgi.p|Trimin1|353686|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=89bp
MPTQTLPGIIIVGAAVGLAGAILGGVHRLSTGEWRMSGRTKWDFDCANRD
KRVRAWQKQIDKQLADQAKDPAAAEALSYYPIAHEDYE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017384NADH_Ub_cplx-1_asu_su-1