mRNA_14300 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|178889
Unique NamemRNA_14300
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|178889 vs. uniprot
Match: A0A836CLD0_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD0_9STRA)

HSP 1 Score: 576 bits (1485), Expect = 5.620e-208
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1 
Query:    1 MHLQNLVELDAPVMVVGDIHGQYFDLLSILRKWRPDHALLFLGDYVDRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDPLNEDEAYKLTDQEYKEVCVRGCSYMFGYRAVARFLRDNALIFMLRAHEVQEEGFRSHFAAHLHPTVLTVFSAPNYCDRYGNKAAILHVEDTGYYTVNLLEAEVRARARRAVVAAAAAQR 849
            MHLQNLVELDAPVMVVGDIHGQYFDLLSILRKWRPDHALLFLGDYVDRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDPLNEDEAYKLTDQEYKEVCVRGCSYMFGYRAVARFLRDNALIFMLRAHEVQEEGFRSHFAAHLHPTVLTVFSAPNYCDRYGNKAAILHVEDTGYYTVNLLEAEVRARARRAVVAAAAAQR
Sbjct:    1 MHLQNLVELDAPVMVVGDIHGQYFDLLSILRKWRPDHALLFLGDYVDRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDPLNEDEAYKLTDQEYKEVCVRGCSYMFGYRAVARFLRDNALIFMLRAHEVQEEGFRSHFAAHLHPTVLTVFSAPNYCDRYGNKAAILHVEDTGYYTVNLLEAEVRARARRAVVAAAAAQR 283
[Close]
BLAST of jgi.p|Trimin1|178889 vs. uniprot
Match: D8LKX8_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX8_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 1.180e-135
Identity = 201/314 (64.01%), Postives = 233/314 (74.20%), Query Frame = 1 
Query:   13 NLVELDAPVMVVGDIHGQYFDLLSILRKWRPDHALLFLGDYVDRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDPLNEDEAYKLTDQEYKEVC--------VRGCSYMFGYRAVARFLRDNALIFMLRAHEVQEEGFRSHFAA--------------------------------------------HLHPTVLTVFSAPNYCDRYGNKAAILHVEDTGYYTVNLLEAE 798
            N+V LDAPVMVVGD+HGQYFDLL+IL++WRPDH LLFLGDYVDRG FSCEV+L L ALKLRHP +VFL+RGNHECS+VSAHFGFK+ECK+KYGLTVYY+FL  FQ +PI ALI T IGRIFA HGGISPDI+ L ++  IDRFAEP+MEG LCD+LW+DPLNED+++KLT +EY+           VRGCSYMFGY AV RFLR+N L++M+RAHEVQEEGFRSHF +                                            HL+PTVLTVFSAPNYCDRY NKAA+LH+E  GYYTVNLLEAE
Sbjct:  225 NMVPLDAPVMVVGDVHGQYFDLLNILKRWRPDHNLLFLGDYVDRGQFSCEVILHLFALKLRHPKNVFLIRGNHECSSVSAHFGFKDECKMKYGLTVYYRFLLAFQTMPICALIETSIGRIFACHGGISPDIRHLSDIEEIDRFAEPEMEGPLCDMLWADPLNEDDSHKLTGEEYQHFLDTDYISNQVRGCSYMFGYHAVQRFLRENRLMYMVRAHEVQEEGFRSHFPSPVWGLAAAAAAAEEGDFSDEDSELGSEEEEEANSYDQVLADTSRHLNPTVLTVFSAPNYCDRYRNKAAVLHIERPGYYTVNLLEAE 538
[Close]
BLAST of jgi.p|Trimin1|178889 vs. uniprot
Match: A0A6H5L564_9PHAE (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L564_9PHAE)

HSP 1 Score: 413 bits (1061), Expect = 2.220e-132
Identity = 202/314 (64.33%), Postives = 233/314 (74.20%), Query Frame = 1 
Query:   13 NLVELDAPVMVVGDIHGQYFDLLSILRKWRPDHALLFLGDYVDRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDPLNEDEAYKLTDQEYKEVC--------VRGCSYMFGYRAVARFLRDNALIFMLRAHEVQEEGFRSHFAA--------------------------------------------HLHPTVLTVFSAPNYCDRYGNKAAILHVEDTGYYTVNLLEAE 798
            N+V LDAPVMVVGD+HGQYFDLL+IL++WRPDH LLFLGDYVDRG FSCEV+L L ALKLRHP +VFL+RGNHECS+VSAHFGFK+ECKVKYGLTVYY+FL  FQ +PI ALI T IGRIFA HGGISPDI+ L ++  IDRFAEP+MEG LCD+LW+DPLNED+++KLT +EY+           VRGCSYMFGY AV RFLR+N L++M+RAHEVQEEGFRSHF +                                            HL+PTVLTVFSAPNYCDRY NKAA+LH+E  GYYTVNLLEAE
Sbjct:  264 NMVPLDAPVMVVGDVHGQYFDLLNILKRWRPDHNLLFLGDYVDRGQFSCEVILHLFALKLRHPKNVFLIRGNHECSSVSAHFGFKDECKVKYGLTVYYRFLLAFQTMPICALIETSIGRIFACHGGISPDIQHLSDIEEIDRFAEPEMEGPLCDMLWADPLNEDDSHKLTGEEYQHFLDTNYISNQVRGCSYMFGYHAVQRFLRENRLMYMVRAHEVQEEGFRSHFPSPVWGLAAAAAAAEEGDFSDEDSELGSEEEEEANSYDQVLADTSRHLNPTVLTVFSAPNYCDRYRNKAAVLHIERPGYYTVNLLEAE 577
[Close]
BLAST of jgi.p|Trimin1|178889 vs. uniprot
Match: A0A6H5L3W8_9PHAE (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W8_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 1.640e-88
Identity = 144/272 (52.94%), Postives = 188/272 (69.12%), Query Frame = 1 
Query:   13 NLVELDAPVMVVGDIHGQYFDLLSILRKW---RPDHALLFLGDYVDRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDP-----------LNEDEAYKLTDQEYKEVCVRGCSYMFGYRAVARFLRDNALIFMLRAHEVQEEGFRSHFAAHLH----------PTVLTVFSAPNYCDRYGNKAAILHV 756
            N +EL AP+ +VGD+HGQ+FDL+S+L      R   + LFLGDYVDRG FSCEV+L LLALK+ HP  V L+RGNHEC +++ HFGFK+ECK KYGL VYY+FLRCF+ +P+ A+I    GR F  HGGISPD+ +LD++  +DR AEP+MEG LCD+LW+DP           L++ E   L +  ++   +RGCS  FGY AV RFL +N L+ ++RAH VQE+G+  HF   L           P V+TVFSAPNYCDRYGN+AA+L +
Sbjct:   95 NALELKAPIKIVGDLHGQFFDLISMLENCGTPRDGASYLFLGDYVDRGEFSCEVLLYLLALKVAHPMKVHLIRGNHECRSLTTHFGFKDECKSKYGLPVYYRFLRCFELMPLCAVIANDHGRYFCTHGGISPDLTSLDQIAALDRRAEPEMEGLLCDLLWADPSDDPGVTNIESLSDQELDSLLNSTFQFNRLRGCSVAFGYLAVRRFLDNNHLMCVIRAHAVQEDGYYRHFEKALKKREVDGDKELPPVITVFSAPNYCDRYGNRAAVLEL 366
[Close]
BLAST of jgi.p|Trimin1|178889 vs. uniprot
Match: D7FVC2_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC2_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 6.030e-88
Identity = 143/272 (52.57%), Postives = 188/272 (69.12%), Query Frame = 1 
Query:   13 NLVELDAPVMVVGDIHGQYFDLLSILRKW---RPDHALLFLGDYVDRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDP-----------LNEDEAYKLTDQEYKEVCVRGCSYMFGYRAVARFLRDNALIFMLRAHEVQEEGFRSHFAAHLH----------PTVLTVFSAPNYCDRYGNKAAILHV 756
            N +EL AP+ +VGD+HGQ+FDL+S+L      R   + LFLGDYVDRG FSCEV+L LLALK+ HP  V L+RGNHEC +++ HFGFK+ECK KYGL VYY+FLRCF+ +P+ A+I    GR F  HGGISPD+ +LD++  ++R AEP+MEG LCD+LW+DP           L++ E   L +  ++   +RGCS  FGY AV RFL +N L+ ++RAH VQE+G+  HF   L           P V+TVFSAPNYCDRYGN+AA+L +
Sbjct:  198 NALELKAPIKIVGDLHGQFFDLISMLENCGTPRDGASYLFLGDYVDRGEFSCEVLLYLLALKVAHPMKVHLIRGNHECRSLTTHFGFKDECKSKYGLPVYYRFLRCFELMPLCAVIANDHGRYFCTHGGISPDLTSLDQIAALNRRAEPEMEGLLCDLLWADPSDDPGVTNIESLSDQELDSLLNSTFQFNRLRGCSVAFGYLAVRRFLDNNHLMCVIRAHAVQEDGYYRHFEKALKKREVDGDKELPPVITVFSAPNYCDRYGNRAAVLEL 469
[Close]
BLAST of jgi.p|Trimin1|178889 vs. uniprot
Match: A0A6G0XI48_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI48_9STRA)

HSP 1 Score: 270 bits (690), Expect = 4.970e-83
Identity = 137/287 (47.74%), Postives = 183/287 (63.76%), Query Frame = 1 
Query:   13 NLVELDAPVMVVGDIHGQYFDLLSILRKWR--------PDHALLFLGDYVDRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDPLNEDEAY-----------------KLTDQEYKEVCVRGCSYMFGYRAVARFLRDNALIFMLRAHEVQEEGFRSHFAAHLH-----------PTVLTVFSAPNYCDRYGNKAAILHVEDT 765
            N++ LDAPV+V GDIHGQ+FDL+ +L K +         D  LLFLGDYVDRGAFSCEVML LL +K+ +P  VFLLRGNHEC  +S+ +GF+ ECK KYGL+VYY F +CFQALP+AA++    GR+F  H G+SP +K+L +++ I+R  EP   GALCD+LWSDP+ E E                        +++   VRGCS+ +   AV  FL  N L+ M+RAHE+Q+EG+  HF++  +           P V++VFSA NYCD YGN AA L ++ T
Sbjct:   46 NVLYLDAPVVVFGDIHGQFFDLMKLLDKCKFFHPSFAESDQTLLFLGDYVDRGAFSCEVMLFLLCMKIHYPTRVFLLRGNHECEAISSFYGFRLECKGKYGLSVYYHFTQCFQALPLAAVVSASEGRVFCVHAGLSPSLKSLSDIDAIERRQEPATTGALCDLLWSDPVPEYEGEVEEPPSTIAAAPRQQIDSPDTMKWRPNGVRGCSFYYNCTAVYDFLTANNLMCMVRAHEMQDEGYLFHFSSPAYFDLDTRPSKEFPPVISVFSAANYCDTYGNMAAYLVIQKT 332
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BLAST of jgi.p|Trimin1|178889 vs. uniprot
Match: A0A485KR45_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KR45_9STRA)

HSP 1 Score: 270 bits (691), Expect = 6.430e-83
Identity = 139/288 (48.26%), Postives = 187/288 (64.93%), Query Frame = 1 
Query:   13 NLVELDAPVMVVGDIHGQYFDLLSILRK---WRP-----DHALLFLGDYVDRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDPLNEDEAYKLTDQ------------------EYKEVCVRGCSYMFGYRAVARFLRDNALIFMLRAHEVQEEGFRSHFAAHLH-----------PTVLTVFSAPNYCDRYGNKAAILHVEDT 765
            N++ LDAPV+V GDIHGQ+FDL+ +L K   ++P     D  LLFLGDYVDRGAFSCEVML LL +K+ +P  VFLLRGNHEC  +S+ +GF+ ECK KYGL+VYY F +CFQALP+AA++ +  GR+F  H G+SP ++TL +++ ++R  EP   GALCD+LWSDP+ E E  + T                    +++   VRGCS+ +   AV  FL  N LI M+RAHE+Q+EG+  HF++  +           P V+TVFSA NYCD Y N AA L ++ T
Sbjct:   44 NVLSLDAPVVVFGDIHGQFFDLMKLLDKCHFFQPSFVNSDQTLLFLGDYVDRGAFSCEVMLFLLCMKIHYPTRVFLLRGNHECEAISSFYGFRFECKSKYGLSVYYHFTQCFQALPLAAVVSSPEGRVFCVHAGLSPSLETLADIDALNRRQEPTTSGALCDLLWSDPVPEYEDEEDTPSPPPPRMLEHRNSIEPDTLKWRPNNVRGCSFYYNCTAVYDFLTRNDLICMVRAHELQDEGYLFHFSSPAYGPLDTRPMKDFPPVITVFSAANYCDSYRNMAAYLVIQKT 331
[Close]
BLAST of jgi.p|Trimin1|178889 vs. uniprot
Match: A0A6A3JFQ7_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JFQ7_9STRA)

HSP 1 Score: 262 bits (670), Expect = 7.620e-83
Identity = 133/259 (51.35%), Postives = 168/259 (64.86%), Query Frame = 1 
Query:   31 APVMVVGDIHGQYFDLLSIL------RKWRPDHALLFLGDYVDRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDPLNEDEAYKLTDQE--YKEVCVRGCSYMFGYRAVARFLRDNALIFMLRAHEVQEEGFRSHFAA----HLH-------PTVLTVFSAPNYCDRYGNKAAIL 750
            A   V GDIHGQ+FDL+ ++           D  LLFLGDYVDRGAFSCEVML LL LK+R    V LLRGNHEC ++S+ +GF+ EC+ KYG++VYY FL CFQ++P+AAL+ T  G+I   HGGISP++KT++++  IDR  E    G LCD+LW+DPL +       D +  ++    RGCSY F   A   FL +N LI MLRAHE ++EGF  HF +    HL        P V+TVFSAPNYCD YGN AA L
Sbjct:   55 ASTYVFGDIHGQFFDLMQLMDAAGMAELQERDMQLLFLGDYVDRGAFSCEVMLYLLLLKIRFSDKVVLLRGNHECESISSFYGFRNECRAKYGISVYYHFLSCFQSMPVAALLPTPRGKILCVHGGISPELKTVEDIQSIDRRREVPTTGLLCDLLWADPLTQSVGVDEVDAQASWEPNQARGCSYYFNAAATFEFLANNQLISMLRAHEYEDEGFSFHFNSEEFRHLDTRQDKSMPPVITVFSAPNYCDSYGNMAAYL 313
[Close]
BLAST of jgi.p|Trimin1|178889 vs. uniprot
Match: A0A835YV28_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV28_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.070e-82
Identity = 140/297 (47.14%), Postives = 176/297 (59.26%), Query Frame = 1 
Query:   10 QNLVELDAPVMVVGDIHGQYFDLLSILRKW-RPDHA--------LLFLGDYVDRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDP------------LNEDEAYKLTDQEYKEVCVRGCSYMFGYRAVARFLRDNALIFMLRAHEVQEEGFRSHFA-----------------------------AHLH----PTVLTVFSAPNYCDRYGNK 738
            +N++ L+APV VVGD+HGQ+FDLLS+L     P            LFLGDYVDRGA+SCEVML LLALKL HP  V LLRGNHEC  ++ HFGFKEECK KYGL VYY+F+R F+ LP+AAL+    GR   AHGG+SP++ T+D ++ +DR  EP M+G LCD+LW+DP            LN      +    +    +RGCS  FGY A  +FL  N L+ ++RAH VQE G+  HF                              A +H    P V+TVFSAPNYC RYGN+
Sbjct:   49 RNVLRLEAPVRVVGDLHGQFFDLLSMLEMCGMPGEGDGEGEGGTYLFLGDYVDRGAYSCEVMLYLLALKLAHPDHVHLLRGNHECRALTGHFGFKEECKGKYGLPVYYRFVRVFEELPLAALVTNDHGRYLCAHGGLSPELATIDAVDALDRRTEPPMDGPLCDLLWADPSDDPSTCPPAAALNAAALETVLGDTFAFNKLRGCSVTFGYSAAVKFLEANDLLCIVRAHAVQENGYYRHFEPVLEQLRAAXXXXXXXXXXXXXXXXXXMLAGVHERPLPAVITVFSAPNYCGRYGNR 345
[Close]
BLAST of jgi.p|Trimin1|178889 vs. uniprot
Match: A0A067BNE1_SAPPC (Serine/threonine-protein phosphatase (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BNE1_SAPPC)

HSP 1 Score: 265 bits (677), Expect = 1.340e-82
Identity = 135/301 (44.85%), Postives = 185/301 (61.46%), Query Frame = 1 
Query:   13 NLVELDAPVMVVGDIHGQYFDLLSILRKW-----RPDHA---LLFLGDYVDRGAFSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTVYYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEPDMEGALCDILWSDPLNEDEA-YKLTDQEYKEVC-------------------------------VRGCSYMFGYRAVARFLRDNALIFMLRAHEVQEEGFRSHFAAHLH-----------PTVLTVFSAPNYCDRYGNKAAILHVED 762
            N++E+ APV+V GD+HGQ+FDLL +L +      +P+HA   LLFLGDYVDRG FSCEVML LL +K+  P+ VFLLRGNHEC  +S+ +GF+ ECK KYGL+VY+ F+ CF++LP+AA++    GRIF  H G+SPD+ T+ ++  +DR  EP   G LCD+LWSDP+ E E    L D++                                    VRGCSY +G  AV  FL  N L+ +LRAHE+Q+EGF  HF++  +           P V+T+FSAPNYCD Y N  A++++ +
Sbjct:  119 NVLEIQAPVVVFGDLHGQFFDLLKMLDQLEFFADKPEHADRKLLFLGDYVDRGVFSCEVMLFLLCMKIHAPSRVFLLRGNHECEAISSFYGFRLECKAKYGLSVYFHFIECFRSLPLAAILDAPDGRIFCVHAGLSPDLDTIADIQALDRRQEPTTSGPLCDLLWSDPVPEYEVELPLADEDDNRTPPEETTSSNGTKNGLKKRPSIVPETARWSPNEVRGCSYYYGCLAVYSFLNRNNLLCILRAHELQDEGFLFHFSSQAYLPLDTRLDTSFPPVITLFSAPNYCDEYNNLGAMMYISN 419
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178889 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLD0_9STRA5.620e-208100.00Serine/threonine-protein phosphatase n=1 Tax=Tribo... [more]
D8LKX8_ECTSI1.180e-13564.01Serine/threonine-protein phosphatase n=1 Tax=Ectoc... [more]
A0A6H5L564_9PHAE2.220e-13264.33Serine/threonine-protein phosphatase n=1 Tax=Ectoc... [more]
A0A6H5L3W8_9PHAE1.640e-8852.94Serine/threonine-protein phosphatase n=1 Tax=Ectoc... [more]
D7FVC2_ECTSI6.030e-8852.57Serine/threonine-protein phosphatase n=1 Tax=Ectoc... [more]
A0A6G0XI48_9STRA4.970e-8347.74Serine/threonine-protein phosphatase n=1 Tax=Aphan... [more]
A0A485KR45_9STRA6.430e-8348.26Serine/threonine-protein phosphatase n=1 Tax=Aphan... [more]
A0A6A3JFQ7_9STRA7.620e-8351.35Serine/threonine-protein phosphatase n=1 Tax=Phyto... [more]
A0A835YV28_9STRA1.070e-8247.14Serine/threonine-protein phosphatase n=1 Tax=Tribo... [more]
A0A067BNE1_SAPPC1.340e-8244.85Serine/threonine-protein phosphatase (Fragment) n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_178contigContig_178:297756..301203 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|178889|e_gw1.178.88.1
BRITEko00000,ko00001,ko01000,ko01009
KEGG Pathwayko04010,ko04020,ko04022,ko04114,ko04218,ko04310,ko04360,ko04370,ko04380,ko04650,ko04658,ko04659,ko04660,ko04662,ko04720,ko04724,ko04728,ko04921,ko04922,ko04924,ko05010,ko05014,ko05031,ko05152,ko05166,ko05167,map04010,map04020,map04022,map04114,map04218,map04310,map04360,map04370,map04380,map04650,map04658,map04659,map04660,map04662,map04720,map04724,map04728,map04921,map04922,map04924,map05010,map05014,map05031,map05152,map05166,map05167
KEGG koko:K04348,ko:K04460
EC3.1.3.16
Descriptioncalcium-dependent protein serine/threonine phosphatase activity
COG categoryT
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0639@1|root,KOG0375@2759|Eukaryota
Evalue9.88e-89
Seed ortholog2880.D7FVC2
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine protein phosphatase catalytic subunit with Zn finger and EF-hand domains
Ec32 orthologEc-11_005950.1
TranscriptId179211
TrackFilteredModels1
ProteinId178889
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178889gene_14300Tribonema minus UTEX_B_3156 geneContig_178 297756..301203 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178889Trimin1|178889|e_gw1.178.88.1Tribonema minus UTEX_B_3156 polypeptideContig_178 297756..301203 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14300_4exon_14300_4Tribonema minus UTEX_B_3156 exonContig_178 297756..297939 -
exon_14300_3exon_14300_3Tribonema minus UTEX_B_3156 exonContig_178 299278..299399 -
exon_14300_2exon_14300_2Tribonema minus UTEX_B_3156 exonContig_178 300276..300461 -
exon_14300_1exon_14300_1Tribonema minus UTEX_B_3156 exonContig_178 300844..301203 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14300CDS_14300Tribonema minus UTEX_B_3156 CDSContig_178 300844..301203 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14300 ID=mRNA_14300|Name=jgi.p|Trimin1|178889|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=852bp|location=Sequence derived from alignment at Contig_178:297756..301203- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCATCTCCAGAACCTGGTGGAGCTGGACGCGCCCGTCATGGTCGTCGG
CGACATCCACGGCCAGTACTTCGACCTGCTCAGCATCCTGCGCAAGTGGC
GCCCCGACCACGCGCTGCTCTTCCTCGGCGACTACGTCGACCGCGGCGCC
TTCAGCTGCGAGGTCATGCTGCAACTGCTCGCGCTCAAGCTGCGCCACCC
CGCGAGCGTCTTCCTGCTGCGCGGCAACCACGAGTGCTCGACCGTGAGCG
CGCACTTCGGCTTCAAGGAGGAGTGCAAGGTCAAGTACGGACTGACGGTG
TACTACCAGTTCCTGCGCTGCTTCCAGGCGCTGCCCATCGCTGCGCTCAT
ACGCACCAAGATCGGCAGGATCTTTGCAGCGCATGGCGGCATTTCGCCGG
ACATCAAGACCCTGGACGAACTCAACCGAATCGACAGATTCGCGGAGCCC
GACATGGAGGGCGCGCTGTGCGACATACTCTGGTCCGACCCGCTCAACGA
GGACGAGGCGTACAAGCTCACCGATCAGGAGTACAAAGAGGTCTGTGTGC
GCGGCTGCAGCTACATGTTCGGCTACCGCGCAGTGGCGCGCTTCCTGCGC
GACAACGCGCTCATCTTCATGCTGCGCGCGCACGAGGTGCAGGAGGAGGG
CTTCCGCTCGCACTTTGCCGCGCACCTGCACCCCACCGTCCTCACCGTGT
TCAGCGCGCCCAACTACTGCGACCGCTACGGCAACAAGGCCGCGATCCTG
CACGTCGAGGACACGGGGTACTACACGGTGAACCTGCTGGAGGCGGAGGT
GAGGGCGCGCGCGCGTCGCGCGGTGGTGGCCGCGGCGGCGGCGCAGCGCT
GA
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protein sequence of jgi.p|Trimin1|178889

>Trimin1|178889|e_gw1.178.88.1 ID=Trimin1|178889|e_gw1.178.88.1|Name=jgi.p|Trimin1|178889|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=284bp
MHLQNLVELDAPVMVVGDIHGQYFDLLSILRKWRPDHALLFLGDYVDRGA
FSCEVMLQLLALKLRHPASVFLLRGNHECSTVSAHFGFKEECKVKYGLTV
YYQFLRCFQALPIAALIRTKIGRIFAAHGGISPDIKTLDELNRIDRFAEP
DMEGALCDILWSDPLNEDEAYKLTDQEYKEVCVRGCSYMFGYRAVARFLR
DNALIFMLRAHEVQEEGFRSHFAAHLHPTVLTVFSAPNYCDRYGNKAAIL
HVEDTGYYTVNLLEAEVRARARRAVVAAAAAQR*
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mRNA from alignment at Contig_178:297756..301203-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14300 ID=mRNA_14300|Name=jgi.p|Trimin1|178889|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3448bp|location=Sequence derived from alignment at Contig_178:297756..301203- (Tribonema minus UTEX_B_3156 )
ATGCATCTCCAGAACCTGGTGGAGCTGGACGCGCCCGTCATGGTCGTCGG
CGACATCCACGGCCAGTACTTCGACCTGCTCAGCATCCTGCGCAAGTGGC
GCCCCGACCACGCGCTGCTCTTCCTCGGCGACTACGTCGACCGCGGCGCC
TTCAGCTGCGAGGTCATGCTGCAACTGCTCGCGCTCAAGCTGCGCCACCC
CGCGAGCGTCTTCCTGCTGCGCGGCAACCACGAGTGCTCGACCGTGAGCG
CGCACTTCGGCTTCAAGGAGGAGTGCAAGGTCAAGTACGGACTGACGGTG
TACTACCAGTTCCTGCGCTGCTTCCAGGCGCTGCCCATCGCTGCGCTCAT
ACGCACCAAGGTGAGCGCCGCCGCGGCGGCCTTTGTGCTTCGCTTCGTTG
CGTTGCATGCCTTAATGTCAGTTGAAGTTACATTCTTCAACTTGAAGTGC
GTACATGAGGCGAGCAATGACTTGTGTCGCGGCGCTCATACGCACCAAAG
TGAGCGCCGCCGCGGCGCGTTCCGCTTTGTTGCGTTGCATACCTTACCTC
AGTTGAAGTCACACTCTTCAACCTAAGTGCGTACATGAAGCGGGCGATGG
CTTGCAGGCGGTGTTGTGTCCCAGGCGAGCAATGACTCTTAGACAGTGCT
GTGGTGCGCTGCCGCGACGTGTCTCCAACTTCAAGGCTGCGTCTCACCTT
GAAGGAATGCCGTTTTCGCACGTGCATTGCGCGTTGCCTCAGATCGGCAG
GATCTTTGCAGCGCATGGCGGCATTTCGCCGGACATCAAGACCCTGGACG
AACTCAACCGAATCGACAGATTCGCGGAGCCCGACATGGAGGGCGCGCTG
TGCGACATACTCTGGTCCGACCCGCTCAACGAGGACGAGGCGTACAAGCT
CACCGATCAGGAGTACAAAGAGGTCTGTGTTGTGGCTCATGCAGTTCAAC
TGTGTATACGTACTTCAACTAGCATGCATGAAGCTGACAGTCGTACCGAT
CAGGAGTACAGAGAGGTGTGTTGTCCGTGCAGTTCAGCTGCGTCTGCGCG
CTTCAACTGGCGGTACAAGTCTAGCAGTACATGATGCTGACAGTCGTAGC
GATCAGGAGTACAGAGAGGTTTGCTGTCCATGCAGTTCAGCTGCGTTTAT
GTACTTGAACCAGAGTACACGCTGGCTGACATGTAGTGTCTCCATGTGCT
TTGAGTAAAAGTGCGTGTGAAGGCGTCGAGCTCGCACGCGTGCGCGCCGA
TGACGGAGGTGTGCGCACGTACTTGCCAAGTGGAAACGCAGCGACGGGGT
GTCTGCGCGTCACGACGCGATGGGTACCTCGGGGGGTGGCAGCAGCGCTG
AATTGGATCAGTGACCCGGTTGGTCGATGATGCGTGTGTGCACGCATGCC
ACTGCTTTTCCGTGCCAATCGCGTGCAGCACCGTGGAACCACCGTAATAG
CGCTGCCGCTACCGGCACATGTACGCCAGTTCTCGCTTTTGCCGTCCGCG
TCCCGCACCAGGCGCGCCACCGCTCAGCGCTGCCGCGACCGCAGCAGCCG
CCGCGTGCATTGCGCAGACGTGTGTGCTCGAGCATTCATCATCGCGCGTA
GCTAGCGCAAGGCTGAGAGTTAGCATCAAGCATCGCCCTAACGCTACCCC
AAAAGCCCTGCTCAATATTCCACATCCACACGTCGAGCGCAATTTAGACC
GACCTCGCTTCGCCCCCCCCCCCCCCCCCCCCGCCCCTGCCCCCCGCGCC
GTCTCCCGTTGCCTGCGCCTGCAGTTCCTCCAGATGGACTTCATCGCCAA
CCAGGTGCGCGGCTGCAGCTACATGTTCGGCTACCGCGCAGTGGCGCGCT
TCCTGCGCGACAACGCGCTCATCTTCATGCTGCGCGCGCACGAGGTGCAG
GAGGAGGGCTTCCGCTCGCACTTTGCGTCGCCCGACGCGCACGGCGTCGC
GGGCGACCTCGATGCGCTCCTCAACGGCGATGACGGGTGAGCGCCGCTGT
CTTTGTCTCTCTGTGCTGTCGTTGTTTTCGTGCGCATGCCAATGGCGTCG
GTGAGTGAGGCCGCGTTTGTGGCGGTAGGCTCACATGTGGACGCGGCGCG
CGCGCGCTGCTTCACTCGCCGAACTGGATGTGCTCGGCGTTGCGGGCGAC
CTCGACGCGCTCCTCAAAGGCGACGACGGGTGAGCGCCGCTGTCTTTGTG
TCTGTGCGCGGCGATGACCATTTCGTTAGCGAGTGAGTGAGACCATGGTT
GTGACGGTAGGCGCGGTGCGAATGCGGCGCGCACGCGCTGTTTCGGGTGC
CAAACTGGACGCGCACGGCGGCGGCGCGAGCGGCCTTGGCGCGCTGCTCA
ACCGCGACGACGCGTGAGCGCGTTTTGTTTCGAATCTTTCGTTGTGTGCG
CGCGCGCGCCGCCGCTGTCGATGATTGTGCGGTGACACCGCCAATGACAT
CATTGCAACGTGTGTTGGCGGCGTGCCGTGACAGCAACAACGACCTAACT
CTGTCCCTAAACGTCTGCGCCGCTTCAGTACGTACCGCTGGCGGCAGCAT
GCCGTGTATCACGCAGCGGCACATCATGCAGACCGCCTGCCATGCGCATG
GCAGTTTCAAGGCCCGCGCATGCCCGAGCGCTGGCAGCGCCTGAGCAGTA
AGTATGTATATATGGACACATATATATGGACACATTTCATTGAATGTCTG
ACAAGAGCGCACCCGACAGAGCCGTTATGAACTACACACAACCTGCATCG
CCGCAGGGACGTCAGGCACCGCAAACATGTCAATGTTAAGTATCACTCGT
GGCCAATCGCTGCAGCAGCGGCGACCACAGTTATTGGTGGAGGGCACTTG
CGGCTAACCACACCTTGTCACCCAGAGCGCTACAATCTTTTGATTCGTTT
CCATAGAGTATCACTCAAGCGACGCCCGTGCCGCCGCGCGCGCGCCGCGC
AGCGGCAGCGAGGACCCCGCGCTCGCCTAGGGCGGCGACTCCACTCACGC
ATTCCACTTGAAGTTCTGACGAAAAGGCGCACCGAGCGACGGAGGCGTAC
CACAAAATCGCATCACAGGCCAACGTTCACAATACGCACGTATCCATAAA
AACACTGAAGCGACGCCCCTGCCGCCGCCGCGCGCGTGCCGCCGCAGCGG
CAGCGAGGACCCCGCGCTCGCCGAAGGCGGCGACTCCACGGACGGCGAGC
CGGACAGCGACGGCGACGAGGCGGAGGAGGCCAAGGCGCGCGCGGAGGCG
CTGCGCGACGAGAGCGCGCACCTGCACCCCACCGTCCTCACCGTGTTCAG
CGCGCCCAACTACTGCGACCGCTACGGCAACAAGGCCGCGATCCTGCACG
TCGAGGACACGGGGTACTACACGGTGAACCTGCTGGAGGCGGAGGTGAGG
GCGCGCGCGCGTCGCGCGGTGGTGGCCGCGGCGGCGGCGCAGCGCTGA
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Coding sequence (CDS) from alignment at Contig_178:297756..301203-

>mRNA_14300 ID=mRNA_14300|Name=jgi.p|Trimin1|178889|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=852bp|location=Sequence derived from alignment at Contig_178:297756..301203- (Tribonema minus UTEX_B_3156 )
ATGCATCTCCAGAACCTGGTGGAGCTGGACGCGCCCGTCATGGTCGTCGG
CGACATCCACGGCCAGTACTTCGACCTGCTCAGCATCCTGCGCAAGTGGC
GCCCCGACCACGCGCTGCTCTTCCTCGGCGACTACGTCGACCGCGGCGCC
TTCAGCTGCGAGGTCATGCTGCAACTGCTCGCGCTCAAGCTGCGCCACCC
CGCGAGCGTCTTCCTGCTGCGCGGCAACCACGAGTGCTCGACCGTGAGCG
CGCACTTCGGCTTCAAGGAGGAGTGCAAGGTCAAGTACGGACTGACGGTG
TACTACCAGTTCCTGCGCTGCTTCCAGGCGCTGCCCATCGCTGCGCTCAT
ACGCACCAAGATCGGCAGGATCTTTGCAGCGCATGGCGGCATTTCGCCGG
ACATCAAGACCCTGGACGAACTCAACCGAATCGACAGATTCGCGGAGCCC
GACATGGAGGGCGCGCTGTGCGACATACTCTGGTCCGACCCGCTCAACGA
GGACGAGGCGTACAAGCTCACCGATCAGGAGTACAAAGAGGTCTGTGTGC
GCGGCTGCAGCTACATGTTCGGCTACCGCGCAGTGGCGCGCTTCCTGCGC
GACAACGCGCTCATCTTCATGCTGCGCGCGCACGAGGTGCAGGAGGAGGG
CTTCCGCTCGCACTTTGCCGCGCACCTGCACCCCACCGTCCTCACCGTGT
TCAGCGCGCCCAACTACTGCGACCGCTACGGCAACAAGGCCGCGATCCTG
CACGTCGAGGACACGGGGTACTACACGGTGAACCTGCTGGAGGCGGAGGT
GAGGGCGCGCGCGCGTCGCGCGGTGGTGGCCGCGGCGGCGGCGCAGCGCT
GA
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