Trimin1|353664|estExt_Genemark1.C_Ctg_1770009 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353664
Unique Name	Trimin1\|353664\|estExt_Genemark1.C_Ctg_1770009
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	288

Homology

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BLAST of jgi.p|Trimin1|353664 vs. uniprot
Match: A0A836CJJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ0_9STRA)

HSP 1 Score: 447 bits (1149), Expect = 1.210e-156
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0

Query:    1 MTGGCEAVAAAAPEGLAQGGEEQQGLDTGRRAALQAKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQLTLRIAKEVYQQKWYATYSLLAEDTSAGHEGPDIGIALHTVKTEVTQTAEAAAFDAGYTDARKVRIAVLKNEIKNQEALKEGQQXXXXXXXXXXXXXXXXGAAKSARAPGGLGRRSARVVTDELAAPEPPAETLSLLPLLLLLRLALLLRPRRAPLPLLFFTPLPLLLLLQRALLWLAXXXXXXXXXXXXXXXLWLLAMRGGESRGLERC 287
            MTGGCEAVAAAAPEGLAQGGEEQQGLDTGRRAALQAKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQLTLRIAKEVYQQKWYATYSLLAEDTSAGHEGPDIGIALHTVKTEVTQTAEAAAFDAGYTDARKVRIAVLKNEIKNQEALKEGQQXXXXXXXXXXXXXXXXGAAKSARAPGGLGRRSARVVTDELAAPEPPAETLSLLPLLLLLRLALLLRPRRAPLPLLFFTPLPLLLLLQRALLWLAXXXXXXXXXXXXXXXLWLLAMRGGESRGLERC
Sbjct:    1 MTGGCEAVAAAAPEGLAQGGEEQQGLDTGRRAALQAKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQLTLRIAKEVYQQKWYATYSLLAEDTSAGHEGPDIGIALHTVKTEVTQTAEAAAFDAGYTDARKVRIAVLKNEIKNQEALKEGQQXXXXXXXXXXXXXXXXGAAKSARAPGGLGRRSARVVTDELAAPEPPAETLSLLPLLLLLRLALLLRPRRAPLPLLFFTPLPLLLLLQRALLWLAXXXXXXXXXXXXXXXLWLLAMRGGESRGLERC 287

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BLAST of jgi.p|Trimin1|353664 vs. uniprot
Match: A0A835ZC94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC94_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.520e-51
Identity = 145/213 (68.08%), Postives = 150/213 (70.42%), Query Frame = 0

Query:   36 AKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQLTLRIAKEVYQQKWYATYSLLAEDTSAGHEG--------------------------------------PDIGIALHTVKTEVTQTAEAAAFDAGYTDARKVRIAVLKNEIKNQEALKEGQQXXXXXXXXXXXXXXXXGAAKSARAPGGLGRRSARVVTDELAAPEPPAET 210
            AKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQL LRIAKEVYQQK YATY++LAEDTSAG EG                                       DIG+ALHTVKTEVTQTAEAAAF AG TD RK RI VLKN+  NQ AL +GQQXXXXXXXXXXXXXXXX   K  RAPG L  R ARVV DELAA  PPAET
Sbjct: 1503 AKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQLALRIAKEVYQQKCYATYAVLAEDTSAGLEGRVRDYLKHTVVSDEHIWRQGCKLLAEHKEEWRGVCKRAADIGVALHTVKTEVTQTAEAAAFGAGLTDLRKARITVLKNKFPNQGALNKGQQXXXXXXXXXXXXXXXX---KPPRAPGSLEPRVARVVKDELAASGPPAET 1712

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BLAST of jgi.p|Trimin1|353664 vs. uniprot
Match: A0A836CD63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD63_9STRA)

HSP 1 Score: 144 bits (364), Expect = 8.220e-37
Identity = 99/177 (55.93%), Postives = 114/177 (64.41%), Query Frame = 0

Query:   11 AAPEGLAQGGEEQQGLDTGRRAALQAKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQLTLRIAKEVYQQKWYATYSLLAEDTSAG--------------------HEG------------------PDIGIALHTVKTEVTQTAEAAAFDAGYTDARKVRIAVLKNE 149
            AA EG AQ GE+ QGL    RA L+A+LTQQ +EM+REHQRLRAQQQRRH+L+L+AQRMTQRH++EQL LRIAKE YQ K   +Y+ LAEDTSAG                     EG                   D G+ALHTVKTEVTQ+AE AAFDAGYTD RK R+ VLK E
Sbjct:  196 AALEGFAQRGEDSQGLAA--RAPLEARLTQQREEMQREHQRLRAQQQRRHKLELDAQRMTQRHEQEQLALRIAKEAYQHKCCVSYARLAEDTSAGCVQRVRDFLKATLATDEHIRREGCKLLAQHRMEWQGLRKRAADAGVALHTVKTEVTQSAEQAAFDAGYTDLRKARMDVLKKE 370

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353664 vs. uniprot

BLAST of jgi.p|Trimin1|353664 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A836CJJ0_9STRA	1.210e-156	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZC94_9STRA	2.520e-51	68.08	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CD63_9STRA	8.220e-37	55.93	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 31..72
None	No IPR available	COILS	Coil	Coil	coord: 143..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_177	contig	Contig_177:101018..108324 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353664	mRNA_15675	Tribonema minus UTEX_B_3156	mRNA	Contig_177 101018..108558 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353664|estExt_Genemark1.C_Ctg_1770009 ID=Trimin1|353664|estExt_Genemark1.C_Ctg_1770009|Name=jgi.p|Trimin1|353664|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=288bp
MTGGCEAVAAAAPEGLAQGGEEQQGLDTGRRAALQAKLTQQEQEMKREHQ
RLRAQQQRRHELQLEAQRMTQRHDREQLTLRIAKEVYQQKWYATYSLLAE
DTSAGHEGPDIGIALHTVKTEVTQTAEAAAFDAGYTDARKVRIAVLKNEI
KNQEALKEGQQQQRQHQQHQQQDKEEGGAAKSARAPGGLGRRSARVVTDE
LAAPEPPAETLSLLPLLLLLRLALLLRPRRAPLPLLFFTPLPLLLLLQRA
LLWLALLMFLLLPHLLLPLLLWLLAMRGGESRGLERC*