mRNA_15675 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353664
Unique Name	mRNA_15675
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353664 vs. uniprot
Match: A0A836CJJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ0_9STRA)

HSP 1 Score: 446 bits (1148), Expect = 3.490e-155
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 1

Query:    1 MTGGCEAVAAAAPEGLAQGGEEQQGLDTGRRAALQAKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQLTLRIAKEVYQQKWYATYSLLAEDTSAGHEGPDIGIALHTVKTEVTQTAEAAAFDAGYTDARKVRIAVLKNEIKNQEALKEGQQXXXXXXXXXXXXXXXXGAAKSARAPGGLGRRSARVVTDELAAPEPPAETLSLLPLLLLLRLALLLRPRRAPLPLLFFTPLPLLLLLQRALLWLAXXXXXXXXXXXXXXXLWLLAMRGGESRGLERC 861
            MTGGCEAVAAAAPEGLAQGGEEQQGLDTGRRAALQAKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQLTLRIAKEVYQQKWYATYSLLAEDTSAGHEGPDIGIALHTVKTEVTQTAEAAAFDAGYTDARKVRIAVLKNEIKNQEALKEGQQXXXXXXXXXXXXXXXXGAAKSARAPGGLGRRSARVVTDELAAPEPPAETLSLLPLLLLLRLALLLRPRRAPLPLLFFTPLPLLLLLQRALLWLAXXXXXXXXXXXXXXXLWLLAMRGGESRGLERC
Sbjct:    1 MTGGCEAVAAAAPEGLAQGGEEQQGLDTGRRAALQAKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQLTLRIAKEVYQQKWYATYSLLAEDTSAGHEGPDIGIALHTVKTEVTQTAEAAAFDAGYTDARKVRIAVLKNEIKNQEALKEGQQXXXXXXXXXXXXXXXXGAAKSARAPGGLGRRSARVVTDELAAPEPPAETLSLLPLLLLLRLALLLRPRRAPLPLLFFTPLPLLLLLQRALLWLAXXXXXXXXXXXXXXXLWLLAMRGGESRGLERC 287

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BLAST of jgi.p|Trimin1|353664 vs. uniprot
Match: A0A835ZC94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC94_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.870e-50
Identity = 145/213 (68.08%), Postives = 150/213 (70.42%), Query Frame = 1

Query:  106 AKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQLTLRIAKEVYQQKWYATYSLLAEDTSAGHEG--------------------------------------PDIGIALHTVKTEVTQTAEAAAFDAGYTDARKVRIAVLKNEIKNQEALKEGQQXXXXXXXXXXXXXXXXGAAKSARAPGGLGRRSARVVTDELAAPEPPAET 630
            AKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQL LRIAKEVYQQK YATY++LAEDTSAG EG                                       DIG+ALHTVKTEVTQTAEAAAF AG TD RK RI VLKN+  NQ AL +GQQXXXXXXXXXXXXXXXX   K  RAPG L  R ARVV DELAA  PPAET
Sbjct: 1503 AKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQLALRIAKEVYQQKCYATYAVLAEDTSAGLEGRVRDYLKHTVVSDEHIWRQGCKLLAEHKEEWRGVCKRAADIGVALHTVKTEVTQTAEAAAFGAGLTDLRKARITVLKNKFPNQGALNKGQQXXXXXXXXXXXXXXXX---KPPRAPGSLEPRVARVVKDELAASGPPAET 1712

[Close]

BLAST of jgi.p|Trimin1|353664 vs. uniprot
Match: A0A836CD63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD63_9STRA)

HSP 1 Score: 144 bits (364), Expect = 6.160e-36
Identity = 99/177 (55.93%), Postives = 114/177 (64.41%), Query Frame = 1

Query:   31 AAPEGLAQGGEEQQGLDTGRRAALQAKLTQQEQEMKREHQRLRAQQQRRHELQLEAQRMTQRHDREQLTLRIAKEVYQQKWYATYSLLAEDTSAG--------------------HEG------------------PDIGIALHTVKTEVTQTAEAAAFDAGYTDARKVRIAVLKNE 447
            AA EG AQ GE+ QGL    RA L+A+LTQQ +EM+REHQRLRAQQQRRH+L+L+AQRMTQRH++EQL LRIAKE YQ K   +Y+ LAEDTSAG                     EG                   D G+ALHTVKTEVTQ+AE AAFDAGYTD RK R+ VLK E
Sbjct:  196 AALEGFAQRGEDSQGLAA--RAPLEARLTQQREEMQREHQRLRAQQQRRHKLELDAQRMTQRHEQEQLALRIAKEAYQHKCCVSYARLAEDTSAGCVQRVRDFLKATLATDEHIRREGCKLLAQHRMEWQGLRKRAADAGVALHTVKTEVTQSAEQAAFDAGYTDLRKARMDVLKKE 370

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353664 vs. uniprot

BLAST of jgi.p|Trimin1|353664 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A836CJJ0_9STRA	3.490e-155	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZC94_9STRA	2.870e-50	68.08	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CD63_9STRA	6.160e-36	55.93	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_177	contig	Contig_177:101018..108558 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353664\|estExt_Genemark1.C_Ctg_1770009
Hectar predicted targeting category	other localisation
TranscriptId	353986
Track	FilteredModels1
ProteinId	353664

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353664	gene_15675	Tribonema minus UTEX_B_3156	gene	Contig_177 101018..108558 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353664	Trimin1\|353664\|estExt_Genemark1.C_Ctg_1770009	Tribonema minus UTEX_B_3156	polypeptide	Contig_177 101018..108324 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_15675_1	exon_15675_1	Tribonema minus UTEX_B_3156	exon	Contig_177 101018..101035 +
exon_15675_2	exon_15675_2	Tribonema minus UTEX_B_3156	exon	Contig_177 101986..102009 +
exon_15675_3	exon_15675_3	Tribonema minus UTEX_B_3156	exon	Contig_177 102478..102760 +
exon_15675_4	exon_15675_4	Tribonema minus UTEX_B_3156	exon	Contig_177 102875..103179 +
exon_15675_5	exon_15675_5	Tribonema minus UTEX_B_3156	exon	Contig_177 108091..108558 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_15675	CDS_15675	Tribonema minus UTEX_B_3156	CDS	Contig_177 101018..101035 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_15675	UTR3_15675	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_177 108325..108558 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_177:101018..108558+
coding sequence from alignment at Contig_177:101018..108558+

spliced messenger RNA

>mRNA_15675 ID=mRNA_15675|Name=jgi.p|Trimin1|353664|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1098bp|location=Sequence derived from alignment at Contig_177:101018..108558+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACGGGGGGGTGCGAGGCTGTTGCTGCTGCTGCGCCAGAGGGACTCGC
GCAAGGAGGTGAGGAGCAGCAAGGGCTGGACACTGGCAGGCGCGCAGCGC
TGCAGGCGAAGCTGACTCAGCAGGAGCAGGAGATGAAGCGCGAGCACCAG
CGCCTCCGCGCGCAGCAGCAGCGCCGGCACGAACTTCAACTGGAAGCTCA
GCGGATGACACAGCGCCACGACCGAGAGCAGCTGACGCTGAGGATCGCAA
AGGAAGTGTATCAGCAGAAGTGGTACGCAACCTATTCGCTCCTTGCCGAG
GACACGAGCGCTGGACACGAGGGGCCGGACATCGGCATCGCTTTACACAC
GGTCAAAACGGAGGTGACACAGACAGCAGAAGCGGCGGCTTTCGATGCAG
GGTACACCGACGCGCGCAAGGTGCGCATTGCCGTTCTTAAAAACGAGATC
AAGAACCAGGAGGCACTGAAAGAGGGGCAACAGCAGCAGCGGCAGCACCA
GCAGCACCAGCAGCAGGACAAGGAGGAGGGCGGTGCTGCAAAATCTGCAA
GGGCCCCGGGCGGCCTTGGGCGTCGTAGTGCGCGCGTTGTGACGGACGAA
CTGGCAGCACCAGAGCCACCAGCCGAGACGCTCTCCTTGCTGCCGCTGCT
GCTGCTGCTGCGGCTGGCGCTGCTGCTACGGCCGCGGCGGGCGCCACTGC
CGCTCCTGTTCTTCACGCCCCTGCCCCTGCTGCTGCTGCTGCAGCGGGCG
CTGCTGTGGCTGGCGCTGCTCATGTTCCTGCTGCTGCCGCACCTGCTGCT
GCCGCTGCTGTTGTGGCTGCTGGCGATGCGCGGGGGGGAGTCTCGGGGCT
TGGAGCGCTGCTGATGCTGCCTTGATGCCTGCCGCTGTGGCACACTGGCT
TAGTGATGCAGCAGAGAGTCAAGATGAGTCGTGAGGAGTCCTAAGTCCTC
GCGCGCGCGCTGTAGCCTCACACGACCCCCCCCCCCTCGCTTCACGTTTC
TCCCTCCTTCCATACCCTGCATTCTGTACGGTTTAGACTTGTAAACAGGG
TAGAAGCTGGTTGACTGGCGGCAGTCCGTCTAGCGTCCTGGAGCCCCC

protein sequence of jgi.p|Trimin1|353664

>Trimin1|353664|estExt_Genemark1.C_Ctg_1770009 ID=Trimin1|353664|estExt_Genemark1.C_Ctg_1770009|Name=jgi.p|Trimin1|353664|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=288bp
MTGGCEAVAAAAPEGLAQGGEEQQGLDTGRRAALQAKLTQQEQEMKREHQ
RLRAQQQRRHELQLEAQRMTQRHDREQLTLRIAKEVYQQKWYATYSLLAE
DTSAGHEGPDIGIALHTVKTEVTQTAEAAAFDAGYTDARKVRIAVLKNEI
KNQEALKEGQQQQRQHQQHQQQDKEEGGAAKSARAPGGLGRRSARVVTDE
LAAPEPPAETLSLLPLLLLLRLALLLRPRRAPLPLLFFTPLPLLLLLQRA
LLWLALLMFLLLPHLLLPLLLWLLAMRGGESRGLERC*

mRNA from alignment at Contig_177:101018..108558+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_15675 ID=mRNA_15675|Name=jgi.p|Trimin1|353664|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7541bp|location=Sequence derived from alignment at Contig_177:101018..108558+ (Tribonema minus UTEX_B_3156 )
ATGACGGGGGGGTGCGAGGTAAAGGACTGCTTGTGCTTGCCCCTTGAAAC
ATGTTGGGTACTTGGTATGAGAATTGCTGAGCTAGTCTTACTTGTGATGG
CACCGGTGGTGTATTGGGCTCGCCTCAGACTTTCGTTGCCCTGCTGCTGC
ATCCAGCTGCTCCCGCGAGTTGAGTGAACCCAAATCTGACCCACAGAAAA
CTGCCGTCAAACCCTAAGCACCAACTAGCTAGGGTTTGCAGTTAATCATC
ACATGGCAGACAACTATGATCATGCCCCGCGCTGGCATGATCCCTAGATT
CGAGAATGCTTCCGGCATGCATTCTCCTTACATATCCCCAACCGTGTCAC
TTTCCTTGCCTCCGGATTCGTGGCGTACAGCAAGCTAACGCGCAACGACT
GTGACTGCATTGCATTCGCCCACAGGCCCTCCCGTCGGCACCACCTACTG
CGGCTGAAGCCACACACTCGGGACCAGTCGTTACCGCCGTCATTACTGCT
GCGCAGTTTGGCCGAGAGCTGGTGTCAAAGGAGTCAAGGGAGCAGCTTCC
GCGGACGAGGGCAGCAGACACAGTCGTAAACTCATCAGCAGCAGCAGCAG
CAGCAGCAACAGGCCTGGTGCAGCCCGGTGCAGACGACATGCCAGCTGTG
GTGCCGCAGTTGCGCTTGGGCTTGCTGCCGGTGCCTGCTCCTGCAACGCT
GTCTGTGAATGGTGCTCCCGCTACACCTACGGCACGGCCGATCGTACTTG
CTGCAATTCCCCCCCTGCGCGCTGCTGCTACAGCGCTGCTGCCACCGCCG
CCGTCTGCTGCCGCGACATGGGGGCCTGCGCACGCTGCCACGGCATGGGG
GCCTGCCAGTGCCTATGCTGCTGCTGCACCAGTGGCGCAATCTACACGCA
CCTCAGCGCCTCCTCTTCTGCGCGCGCTGCCGCCGCCCGCTGCCGCATGG
GGACCCGCCTATGCTCAGGCTGTTGCTGCTGCTGCGCCAGAGGTACCGTC
TGTACGTGCTCCAGAGCCTCCTCATGTGCGCGCTGCTGCCGCTGCGCTGG
AGCTGCTGCCGCCGTCTGCTGCAGCGACAAGGGGGCCTATGCACGCAGCT
GTGGCATGGGGGCCTGCCTATGCTGCCACTGCTGCTGCAGCCGCTGCTGC
ATTGCAGGTGCAGCAGTCTACACGCGCCCCAGTGCGTCCTGTCATCAACG
ATGCTGCCGCTGAGCTCTCGCCGCCACCACTGCATACTTCCACATGGGGG
CCTGCGTATGCTGCTGCTGCTGCGCCAGACACGGCCGGTGTGGCACCTCT
GTCGCGCATGCCAGCGCCAGCGGGGCCACCCGATACACCCATCCTCCGGA
CGGCAACGCATTGTGGAGATGACATGCTGAGCACTGCCGCGGCTGCAGCT
ACTCAGCAGGCACCCGTGGACGCGATCGCTCACCCCAGGCACCTACCAGA
TGCTCTGCAGGGACTCGCGCAAGGAGGTGAGGAGCAGCAAGGGCTGGACA
CTGGCAGGCGCGCAGCGCTGCAGGCGAAGCTGACTCAGCAGGAGCAGGAG
ATGAAGCGCGAGCACCAGCGCCTCCGCGCGCAGCAGCAGCGCCGGCACGA
ACTTCAACTGGAAGCTCAGCGGATGACACAGCGCCACGACCGAGAGCAGC
TGACGCTGAGGATCGCAAAGGAAGTGTATCAGCAGAAGTGGTACGCAACC
TATTCGCTCCTTGCCGAGGACACGAGCGCTGGACACGAGGGGCGTGTGCG
CGACTACCTCAAGCACACTGTTGTTTCTGATTAGCACATTCGGAGGCAGG
GCTGCAAGCTTCTTGCCGAGCACAAGGGGGAGTGGCAGGGCTTGTGCAAA
CGCGCAGCGGACATCGGCATCGCTTTACACACGGTCAAAACGGAGGTGAC
ACAGACAGCAGAAGCGGCGGCTTTCGATGCAGGGTACACCGACGCGCGCA
AGGTGCGCATTGCCGTTCTTAAAAACGAGATCAAGAACCAGGAGGCACTG
AAAGAGGGGCAACAGCAGCAGCGGCAGCACCAGCAGCACCAGCAGCAGGA
CAAGGAGGAGGGCGGTGCTGCAAAATCTGCAAGGGCCCCGGGCGGCCTTG
GGCGTCGTAGTGCGCGCGTTGTGACGGACGAACTGGCAGCACCAGAGCCA
CCAGCCGAGACGGTCAGTGCCATGGTGCGCAGGTAGCCAAAATGATTGAG
CAATGCTGCAGCGGGGGGTGTTCAGTTATCATTCAAGCCTCACTGAGCGT
TCCACATGACATTGTGCATCAAACTGCAAGCATTTTCCATGCACTTGCGT
AGTCAAGTGAAGTGATCATCCCTGCATGCATGCTCTGATGGCACATCTGT
GAAATGTGCCTGCTCTGCAATGCTGCATCTGCATGCACATTCAAGTGCTG
GTTGCAGAACTGCTCACGCTTCCTACATCAAAGCGCCGTTTGCGCAGGCA
TGTGCATCATGGTCGGCTTTTCATCGAACCCGCATTAGACTGATGCTCAC
ACAGAGTGTCTATGTCATGGAATCATGTGCAGTAATGTACGCAGCATGCT
CGGCTTTTCATGCCTTACGAAATTTCTATCGCCTTCAAACACGCAAATGC
AACATCTGGCCGACCCAGCATGATCACACGGGGTTACTGGCCTTATGCAC
CATAACGATTAGCACAAACACCACCTTAAGGATACAGTTAGCCTAATCTG
CCCTTTACAAGCGCCGCCAACTGGGTGCACAAAAGCTCTGCCGTTGCGCT
GTCAATTGCGCTGAGGGCTGAGATATGACTCAGGCATTGCGTAATCTCTT
CTGCGCCGCTGCCGTTACCGCCACGTGCAGGACCATGATGTAGAGCCTGA
GGCCTAGTCGCCGCTACCACCACAAGCACCAACAGAGGTGGTTGTGCGCG
TGTACCTGCACAATTGGCGAACATCCCGATGATCTGGTGCGATCGCAACC
AAGGTCGTCGTCACCAGGTGCTGGGTGTACGGTGGTGCAAGCCAGGGACT
TGGAGGCTCAGCTCTACGCGCGGAATTCGTCACCTAGAGGCAACCCTTAC
TTTGGCATCATCTGTCCTGGGGGTGCGTTACATGTGCTGGTTTTGTCACC
GTGCTGGCGGCACGCATGTCTGCAAGATGCGCTGCCAGCAAAGCAGAGCG
GCCTTCATTCTGCCGTCCGTTGAGCGCTCTCTACGGAGGAGGCGTCTCAG
TCCTTTTTCAATGCACTGCGTGTTTGGCTGTCATCAACGTGGACATCTGT
AATGTTGTGCCCATGCCTTCTGCTGTGCCTGCCATGTCACCATTGAGTGG
ATGCCAATTGGCACAACATGGAAGCAGACGGATCCATAACTTACATTCGT
TGCATGCCATTGTGTGTTTTGGATCGCGGGCAAGATCAACTGCAGCATGT
GTTTCAGCAGGGCATGCACTCGCCGTCGTAGTGAGAATTCATTCAACCAG
CCACAACGACTTTGACAGTGTACCATATAATCAGCCAGGGTTGTCTCTCG
TGCCAACACTGCCCCCCAGACGACGACATGCCCCAGAGCACCGCAGTGCG
GAGCAATGCTGCTTGACTCCTTGCAATCCTACTCAATTTGCGCGTCCCAT
TGACTCCTTGCAATCCTACTCAATTTGCGCGTCCCATGCACAATGGTCAA
GCAGTAAAGCGTCCGCTTACGGTATGATGGCGACATAAATTCATGCATGA
TGATGTCGGTGCACGCCCTGCTTGATGATCAACTTGCCGAGCCTGACTTG
TTTGGGCCATGCCAAGTACTGCACTGGTGCATGCAATAGCATGTGATCCT
GTGCATGGCACCACTGGCAGCTCAAGCCTGTGATGTGTTTGTGAGCTCAC
CCTACAGACTCAGTCGGACATGCAACCTTCGCGAGGTATTGAGGGTCTGG
CATTTTGACTACGAATGAATCAAGACTATGACATTGTCATGTTGGTCTGC
AGTGACTGCATGATCTTTTGCAACAAGGCACTTAATGCCAATGCCAGTTG
CCACATCATCAAGCTGCAGACGATCTGCCTCCTTCACAATCGTCAACATG
CAAGTCATTAAACACATGAGCGTTAAGCGCAACATTGATCTTGCCAAGCT
TAGGAAAAGACTTGACGATGTGTGGCGTGTTGCTCAGTCTTGAAAGCTTC
ATGTGGGACACTCACCGCATGCCAGCCATTCTTGAACTCGCGCTCGCAAT
AAGATGCCGCAGAAGAGCATTGCGCTGTCAGTAGTCTGCGTAAGGTCTCT
GTGACCACTATGTGCCTGGTCTGCCACACATTTGTAGAGAGAAACAAATC
CAGATGCAACACGTGAACCTGCATTCAATGTTGGATGTCACTGTGATTAG
AACACCTGAAGCAGTACGCGACGCGGACCTTGTGCTGTGAGCATGGCAAA
CCATCAGCGGGCGCATGAAGTGCTACAAAAGCAATGATGCCTGTATCGCG
CATACAACAACCAGACGCACTACATACAGGGCAAACAGGGAGACTCAGGA
GACAGGTTGCTTGGCATGGCCCAATCATATGCAATCATCATGTGCATTGC
CAACCTCAGAACCGCCTTCGTCCCATTCTTTTTCTCAAACGCACTCAGTT
CACACACACTTTGCCAGACGAAAGACTCCGAAACAGTCCGCGACTGGCAG
ATCCCAGCAAATGTGGCCATCCTCACCACCCCCAGCAACATATTGCCCTT
GCCGCCACTGCACATTATGAGATGACGAGCGCACTGCCTTCGGTTGTATG
CACACAATTTCGCTTGCGGTGTACGTAGCGTTGTGCGCGCACAGCCTGCG
GTAATGTATGCTGCATTGCAGCTACATTTGCAGTGCTTGCTAGTCACTGA
AAGCCCCCCCTTTGCTCTTGAGCTGTATATACCTAAGCCATTTTTGCTCT
TGTTGGTGCTGCTAATGTGCCTCTAGCGCTCTGCCTCCCCCATGCGCATG
CACACGGGCTGACCCCCCCCCCCCCCCACACACACACACACACTCCTCCC
CTCACCATTAATCTACTTGGCTCAGGGCCTGCCTCACAACAGCGTACTGC
ATGCTTATACTCTAATTGCGCACAGCCCCCACACTCATCGCTTGGGACTC
CACAGCGGGGACAACGCCTCCGCTGTTGAGCAGCGCACACCGTGCAGCGG
TGAGTTGCACTGCAGGTGGTGCCGTTGTCGTTATGTACTGGTGATATTGC
TGCTGTGCTGCTCTCTAACCGTCAGCTCTGCTGCTGTTAACTGCTGGTGG
TGAAAGAGTCCGCGTCCCTGGCAGGTGCGGACGGCGCAGCAGTTGCGGTT
ACGGCAGGTGTGTCTGCGTCCGTGCCGGCCACCGCAGCAGTGCTCGATTT
ATTGGCGCGCTGTGAAATGTGCCATGGTTGCGGCGATTTAAAAGCCAGTC
GGCGCTGCGCCATCACCTTCATCCTGCAGTTGGGAGCGACCGCAGCAAAA
TTGAGGGAGCAAATGTGAGACACTTTCTCACAAGTGACTGAGAAATCACA
TGACATTACCATAGCTCACGTATATTTAAATAGGCCAAAAAGCAGGTCGC
TGTGAGTCGTCGCGATGCTCAGTCAGAGTCACTACACCCTGGTGCAAGAC
ACAATGCACAAGTCATGCTTGTGTGGACTTGAAAGCATATGTAGGACACA
AGTGCACCGCGCACATTCCTGAGAGGCATTATACCAGCATACACTAGAAA
ATGCGGGCATTGTCGGCGCTGCAGGTGCTTTTCATGATGCGCATCAGTGA
TGTGACACATGAGCTTGTGAACACTGTTGACTGTAGTTCCGAACAGTGAA
GGTTCACATATGTAAATACACAAACTCCTTTTAACAATGATGTGGCAAGA
CAATGCGGCGTGTCTGTCAAGATGTTCACCATGATATCAGCAACGTACTG
GTAAATGAGGGTTTACTGGCATTGCCAGCAGCGCTGCATACTTTGAAGCA
TGTAATTTGCAGGTCATGTATTTTCTCTACAGCAGGCACCCTCTCTGACT
GTGTGGTACATCAACTATGCCAACGCGCATACGCTCGCTAGCAAACAACC
AGAGTTGAAGAGTGGGCGTTGAAGATATATTTGGGTGTGGCAAATGCTCA
CCTCATTTTCTGCAGAGGCGTCGGACACATAGCCCTCTGGTCGCACTGCT
GCATGAAACGCCTCCGCCTCTGACTCAGACACCGCCAAGTCAGACTCTGC
GTCAGCCCGCGGAGACCCTGAGTCAGACTGGAAGTCTTGGTCAGACAGCA
GCCAGATTGCTTCATCCTCTTGGTGCTGTGGGGAGAAACATCACCAATAT
CAGGAGAGCGCAAATGAGGCCTAGGCTCTGTCTCTCGTGTGATTGGGCAG
CGTTACATCACCCGCTGCAATCGTTGTCTACGAGTCAATCAGGTGGGCCA
AAAGGTAGGCTGCAATGATGTCGGCACAGAGCACTTGCTGTCAGTCTTAC
TGTATTGTTCGTTTGGTACATGGACAACACTTTGCAAGTAGCACATGTTT
GTGATGATGACGTACATAAATTAGAGATGCTGCGCGCGTGGTCATCTCAA
CATGCAGCATACCATCGTAAAGAGGACATGAGGAATCACATATGTTCACG
TTTTCCATGATGCGCAACGGCAGTGTGACACTGAGTATACAACGAGGTTT
AATGAATGTGAGTAGACACTTCACCTGATGACATGAGAACACTGCGGCTT
GATCTTGACAACAATCTCCAATTGTGACAACATGGGTAAAGCCTACAGCC
AAAGCGTGTCGGCTGTCGTCGTCAGCAGGGCTGCATGCTTTTTGACAGTC
CATCACTGGTCAGCGAACTAGAGTATCCGATTAGGGTTGAAGTGTCTCAA
AAATGCTCACCTTGTCGGTCGCACTGGGCGCATCGTTGTGCACAGCTGCA
GGGGTACCATCCGCCTCTGCCGCCGACTCAGCCTGAGGCCCGCCTGCAGG
CTCTTGCTGCCCAGACTGAGTCCCGCTCAGATGAGGGGGCTCATGCTGCT
GCTGCTGCTGATGCTCTTGCTGCTGCTGCTGCTCTTGCTGCTGCGCGCGC
CGCTGCTGCTGCTGCTGCTGTAGCTCTCCTTGCTGCCGCTGCTGCTGCTG
CTGCGGCTGGCGCTGCTGCTACGGCCGCGGCGGGCGCCACTGCCGCTCCT
GTTCTTCACGCCCCTGCCCCTGCTGCTGCTGCTGCAGCGGGCGCTGCTGT
GGCTGGCGCTGCTCATGTTCCTGCTGCTGCCGCACCTGCTGCTGCCGCTG
CTGTTGTGGCTGCTGGCGATGCGCGGGGGGGAGTCTCGGGGCTTGGAGCG
CTGCTGATGCTGCCTTGATGCCTGCCGCTGTGGCACACTGGCTTAGTGAT
GCAGCAGAGAGTCAAGATGAGTCGTGAGGAGTCCTAAGTCCTCGCGCGCG
CGCTGTAGCCTCACACGACCCCCCCCCCCTCGCTTCACGTTTCTCCCTCC
TTCCATACCCTGCATTCTGTACGGTTTAGACTTGTAAACAGGGTAGAAGC
TGGTTGACTGGCGGCAGTCCGTCTAGCGTCCTGGAGCCCCC

Coding sequence (CDS) from alignment at Contig_177:101018..108558+

>mRNA_15675 ID=mRNA_15675|Name=jgi.p|Trimin1|353664|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=864bp|location=Sequence derived from alignment at Contig_177:101018..108558+ (Tribonema minus UTEX_B_3156 )
ATGACGGGGGGGTGCGAGGCTGTTGCTGCTGCTGCGCCAGAGGGACTCGC
GCAAGGAGGTGAGGAGCAGCAAGGGCTGGACACTGGCAGGCGCGCAGCGC
TGCAGGCGAAGCTGACTCAGCAGGAGCAGGAGATGAAGCGCGAGCACCAG
CGCCTCCGCGCGCAGCAGCAGCGCCGGCACGAACTTCAACTGGAAGCTCA
GCGGATGACACAGCGCCACGACCGAGAGCAGCTGACGCTGAGGATCGCAA
AGGAAGTGTATCAGCAGAAGTGGTACGCAACCTATTCGCTCCTTGCCGAG
GACACGAGCGCTGGACACGAGGGGCCGGACATCGGCATCGCTTTACACAC
GGTCAAAACGGAGGTGACACAGACAGCAGAAGCGGCGGCTTTCGATGCAG
GGTACACCGACGCGCGCAAGGTGCGCATTGCCGTTCTTAAAAACGAGATC
AAGAACCAGGAGGCACTGAAAGAGGGGCAACAGCAGCAGCGGCAGCACCA
GCAGCACCAGCAGCAGGACAAGGAGGAGGGCGGTGCTGCAAAATCTGCAA
GGGCCCCGGGCGGCCTTGGGCGTCGTAGTGCGCGCGTTGTGACGGACGAA
CTGGCAGCACCAGAGCCACCAGCCGAGACGCTCTCCTTGCTGCCGCTGCT
GCTGCTGCTGCGGCTGGCGCTGCTGCTACGGCCGCGGCGGGCGCCACTGC
CGCTCCTGTTCTTCACGCCCCTGCCCCTGCTGCTGCTGCTGCAGCGGGCG
CTGCTGTGGCTGGCGCTGCTCATGTTCCTGCTGCTGCCGCACCTGCTGCT
GCCGCTGCTGTTGTGGCTGCTGGCGATGCGCGGGGGGGAGTCTCGGGGCT
TGGAGCGCTGCTGA