Trimin1|353661|estExt_Genemark1.C_Ctg_1760027 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353661
Unique NameTrimin1|353661|estExt_Genemark1.C_Ctg_1760027
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length625
Homology
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A835ZCD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD8_9STRA)

HSP 1 Score: 1189 bits (3076), Expect = 0.000e+0
Identity = 624/624 (100.00%), Postives = 624/624 (100.00%), Query Frame = 0
Query:    1 MSMPFWTAHRIKLVLPTASAATRREAVVAVLAICMPEGLNLPDSEMLAALERAAQSGGERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTPEGSTSSHAPGAINNMVSTHDGVHSMKLYHPTQQXXXXXXXXXXAMSDFYSHVYHQHLVLPSAFNCPPNGANNTSTPNTWLMDLMDGLGGAGVNSSVSAAAAADAEFHALHADALHGDMGGDDGIDMWSSLGNNLASIAFQNSAALGEGGDARRLLAGDAQQQQQLSGAACTHFDNRPADLTHGGDAQTVMDMDGAHVGGAXXXXXXXXXXXXXXXXXXXDTEGGNELFQDFVGSFLQQVPFEAVDVWVPLARQETGGRVVLFHAGYFTNELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD 624
            MSMPFWTAHRIKLVLPTASAATRREAVVAVLAICMPEGLNLPDSEMLAALERAAQSGGERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTPEGSTSSHAPGAINNMVSTHDGVHSMKLYHPTQQXXXXXXXXXXAMSDFYSHVYHQHLVLPSAFNCPPNGANNTSTPNTWLMDLMDGLGGAGVNSSVSAAAAADAEFHALHADALHGDMGGDDGIDMWSSLGNNLASIAFQNSAALGEGGDARRLLAGDAQQQQQLSGAACTHFDNRPADLTHGGDAQTVMDMDGAHVGGAXXXXXXXXXXXXXXXXXXXDTEGGNELFQDFVGSFLQQVPFEAVDVWVPLARQETGGRVVLFHAGYFTNELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD
Sbjct:    1 MSMPFWTAHRIKLVLPTASAATRREAVVAVLAICMPEGLNLPDSEMLAALERAAQSGGERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTPEGSTSSHAPGAINNMVSTHDGVHSMKLYHPTQQXXXXXXXXXXAMSDFYSHVYHQHLVLPSAFNCPPNGANNTSTPNTWLMDLMDGLGGAGVNSSVSAAAAADAEFHALHADALHGDMGGDDGIDMWSSLGNNLASIAFQNSAALGEGGDARRLLAGDAQQQQQLSGAACTHFDNRPADLTHGGDAQTVMDMDGAHVGGAXXXXXXXXXXXXXXXXXXXDTEGGNELFQDFVGSFLQQVPFEAVDVWVPLARQETGGRVVLFHAGYFTNELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD 624          
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: D8LER0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER0_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 6.340e-116
Identity = 256/648 (39.51%), Postives = 323/648 (49.85%), Query Frame = 0
Query:   68 RTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTPEGSTSSHAPGAINNMVSTHD---GVHSMKLYHPTQQXXXXXXXXXXAMSDFYSHVYHQHLVLPSAFNCPPNGANNTSTPNTWLMDLMDGLGGAGVNSSVSAAAAADA--EFHALHADALHGDMGGDD-----GIDMWSSLGNNLASIAFQNSAAL----------GEGGDARRLLAGDAQQQQQLSGAACTHFDNRPADLTHGGDAQTVMDMDGAHVGGAXXXXXXXXXXXXXXXXXXXDTEGGN--------------------------------------------------------------------ELFQDFVGSFLQQVPFEAVDVWVPLARQET-GGRVVLFHAGYFTN--ELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD 624
            RTGRWHSYET+YAQ ++ DF+AGT+P+ EGTKL + LC +LNC+ +RLSKKLKIGK+++   P R    E IA HR  Q+R+S+LEEMFLMAE QT RG A T ILSE +Q EWRERF+ HAHTVNQKL++AW WNS++R     SDA++K         G   GG            VQ   +G+ +     A+ N++ +     G H M+ +       XXXXXXXX                                   +L  +    GGAG   S           + H   A  + G   G D     G ++WSSL NNLAS+ +QNS A+          G G     L  G     +  +    +  D     L  GG+  +  +      GG                     + GGN                                                                      F+DF+G+FL Q+PFEAVDVWVPL  Q+  G  VVLFHAGYFTN  ELEEWG+YSTNFSF +G+GLPGRV+ +N SEWQE+V  L H  FLRLNGA+  GIRT+FGVPVVSR GVTFVIVFYSR  V ++  ++AFIERTV +WKFDA VD
Sbjct:  153 RTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEMFLMAESQTNRGVANTQILSECIQKEWRERFIGHAHTVNQKLKNAWDWNSSRRKAELSSDALSK---------GQAAGG------------VQG--QGTHNVSLVQAMGNVIQSWQQGQGQHGMQRFPSANGDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLSAMTQQRGGAGAGFSWLEQQTGQGCQQRHGQGAPQIQGSHEGMDDMEGFGEELWSSLENNLASMGYQNSVAIEDMDPDLNNHGNGQWTGALAQGQGPLGENTTAGTSSTLDE--PQLFIGGNGSSNSNT----AGGPGVATLRDAGRGNPGRPAWQPSTGGNMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSHRFEDFIGNFLDQIPFEAVDVWVPLCNQDQEGSEVVLFHAGYFTNVKELEEWGDYSTNFSFRQGQGLPGRVYANNKSEWQENVVNLNHAHFLRLNGAMNIGIRTSFGVPVVSRWGVTFVIVFYSRVAVQMDADMKAFIERTVSAWKFDATVD 771          
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A836CDJ8_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ8_9STRA)

HSP 1 Score: 276 bits (705), Expect = 6.330e-85
Identity = 143/214 (66.82%), Postives = 162/214 (75.70%), Query Frame = 0
Query:   40 NLPDSEMLAALERAAQSGGERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGP----SGSDAITKFLNTMVPQPGPQT--GGDFALSPMAPLFLVQ 247
            ++  SE L  L     +       D ELRTGRWH YET YAQH+++DFEAGTLPIGEGTKLA+LLCRLLNCNQTRLSKKLKIGKRFYAH P R  T EAIAAH VRQRR+SELEEMFLMAE QT RGA TTP LSEKMQ EWRERFV HAH++NQKL+DAWSWNS +R       + S AI K L+++ P     +  GGDF++SPMAPLFLVQ
Sbjct:   55 DMTQSEGLQVLPVEPHNNEPAENADTELRTGRWHHYETQYAQHLMEDFEAGTLPIGEGTKLATLLCRLLNCNQTRLSKKLKIGKRFYAHGPTRIRTPEAIAAHSVRQRRISELEEMFLMAEAQTARGALTTPGLSEKMQTEWRERFVGHAHSMNQKLKDAWSWNSKRRVSDLSTTNTSAAINKLLSSIAPTSSSNSTGGGDFSVSPMAPLFLVQ 268          
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A6H5KFM7_9PHAE (RING-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFM7_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 1.650e-61
Identity = 136/351 (38.75%), Postives = 182/351 (51.85%), Query Frame = 0
Query:   51 ERAAQSGGERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTPE------GSTSSHAPGAINNMVSTHDGVHSMKLYHPTQQXXXXXXXXXXAMSDFYSHVYHQHLVLPSAFNCPPNGANNTSTPNTWLMDLMDGLGGAGVNSSVSAAAAADAEFHALHADALHGDMGGDDGIDMWSSLGNNLASIAFQNSAAL 395
            E   + GG+R   + + RTGRWHSYET+YAQ ++ DF+AGT+P+ EGTKL + LC +LNC+ +RLSKKLKIGK+++   P R    E IA HR  Q+R+S+LEEMFLMAE QT RG A T ILSE +Q EWRERF+ HAHTVNQKL++AW WNS++R     SDA++K L+++ P  G Q     A+  +APL LV    +      G  +  A G     VS    V ++       Q           +         Q          PP   ++        MD M+G G                                    ++WSSL NNLAS+ +QNS A+
Sbjct:  139 EEDERKGGDR---EHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEMFLMAESQTNRGVANTQILSECIQKEWRERFIGHAHTVNQKLKNAWDWNSSRRKAELSSDALSKLLSSITPSKGEQ-----AMGHLAPLMLVSQNGDNNNGNQGQATGGAQGQGTQNVSLAQAVGNVAFLSAMAQQRGGAGAGFSWLEQQTGQGCQQRYGQ----GAPPMQGSHEG------MDDMEGFG-----------------------------------EELWSSLENNLASLGYQNSVAI 436          
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: D8LLI7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLI7_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 4.290e-53
Identity = 99/196 (50.51%), Postives = 130/196 (66.33%), Query Frame = 0
Query:   58 GERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSN-KRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTPEG 252
            G R   + + RTGRWHS+ET+YAQ ++ DF+AGTLP+ EGTKL +LLC +LNC+ +RLSKKLKIGK+ +     R  T E IA HR  Q+R+S+LEEMFLMAE +  RG A    LSE +Q EWRER V HA  VNQ+L++AW WNS+ KR     ++  T  LN ++    P    D  ++ +APLFL  H  +G
Sbjct:  106 GAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEMFLMAESRANRGMANAETLSECIQKEWRERLVEHALAVNQRLKNAWDWNSSRKRAERKRAELSTNALNKLLSTITPNQSSDSTVNHLAPLFLTNHNADG 301          
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A6H5JBQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ8_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 1.410e-52
Identity = 96/150 (64.00%), Postives = 116/150 (77.33%), Query Frame = 0
Query:  478 FQDFVGSFLQQVPFEAVDVWVPLA-RQETGGRVVLFHAGYFTN--ELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD 624
            F+ F+ +FL QVPFEAVDVWVPL  R + G  VVLFHAGYFTN  EL+EWG+YSTNFSF +G+G+PGRVFGSN SE+ E+V  L  +MFLRLNGA K GI T+F +PVVSR GVTFVIVFY+R T+ ++   + FIE  VR W+ DA VD
Sbjct:  135 FEQFIANFLDQVPFEAVDVWVPLCDRDQEGSEVVLFHAGYFTNVKELDEWGDYSTNFSFRQGQGIPGRVFGSNQSEFHENVVNLDLSMFLRLNGARKIGIGTSFALPVVSRWGVTFVIVFYTRATIQLDAEKKVFIENMVRGWELDATVD 284          
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: D8LLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI8_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 2.890e-45
Identity = 115/261 (44.06%), Postives = 149/261 (57.09%), Query Frame = 0
Query:  373 GIDMWSSLGNNLASIAFQNSAALGEGGDARRLL---------AGDAQQQQQ-LSG------AACTHFDNRPADLTHGGDAQTVMDMDGAHVGGAXXXXXXXXXXXXXXXXXXXDTEGGNEL-----FQDFVGSFLQQVPFEAVDVWVPLA-RQETGGRVVLFHAGYFTN--ELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAF 609
            G D  SSL  NL S+A++NS  + E  D +            AG  QQQ+Q ++G      +A +   ++ + +  G ++ +          GA                     +GG  L     F+ F+ +FL QVPFEAVDVWVPL  R + G  VVLFHAGYFTN  EL+EWG+YSTNFSF +G+G+PGRVFGSN SE+ E+V  L  +MFLRLNGA K GI T+F +PVVSR GVTFVIVFY+R T+       AF
Sbjct:   56 GDDHLSSLEQNLTSLAYKNSMVI-EKMDQKPPFSASIEQWPQAGQGQQQEQGVTGGNPGKDSASSLNGSQMSAMDVGANSSSSTGTPSDVAAGAPPAGGGPAAAGTGEGKEKTGRDGGAALNDDHPFEHFIANFLDQVPFEAVDVWVPLCDRDQEGSDVVLFHAGYFTNVKELDEWGDYSTNFSFRQGQGIPGRVFGSNQSEFHENVVNLDLSMFLRLNGARKIGIGTSFALPVVSRWGVTFVIVFYTRATIQGEKRESAF 315          
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A7S3UXI5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXI5_HETAK)

HSP 1 Score: 149 bits (375), Expect = 9.280e-38
Identity = 78/163 (47.85%), Postives = 104/163 (63.80%), Query Frame = 0
Query:  475 NELFQDFVGSFLQQVPFEAVDVWVPLARQE--TGGR------VVLFHAGYFTNE-----LEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD 624
            N+ FQD++  FL  +PFEA DVWVP+ +++  T G       V L HAG+F+       L+ WGEYST FSF +G GLPGR + S    W+ ++  +   MFLR  GA   GI T F VPV S RGVTFVIVFYS+  +  N  ++ FIERTV++W+FDAN++
Sbjct:   27 NQKFQDYIAKFLNSIPFEAADVWVPVIKRQPATDGAPAQASGVTLCHAGHFSQHQPSGNLKHWGEYSTAFSFPEGVGLPGRAYASRFPAWK-NIRAMSQEMFLRKKGADLCGINTAFAVPVTSCRGVTFVIVFYSQAELLENANVKLFIERTVQTWEFDANMN 188          
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A7S3UTL1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTL1_HETAK)

HSP 1 Score: 97.1 bits (240), Expect = 1.260e-17
Identity = 50/127 (39.37%), Postives = 69/127 (54.33%), Query Frame = 0
Query:  500 LARQETGGRVVLFHAGYFTN--ELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD 624
            L  +  GG VVL H G       L  W  +S  F F+   GL GRV G N  EWQ+DV  +    FLR  GA   G+RT FG+P+ S RG  FV+ FYS +       +  ++E +V+SWKF ++++
Sbjct:  309 LGGERPGGEVVLCHGGSVEKAPHLRGWAAFSQQFEFQDNVGLIGRVVGQNRCEWQQDVGSMLPYEFLRCEGARSFGLRTAFGIPIRSERGAKFVVCFYSTQRFARREEVARYLEGSVQSWKFSSSLE 435          
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A1Z5KJS1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJS1_FISSO)

HSP 1 Score: 93.2 bits (230), Expect = 5.110e-16
Identity = 62/153 (40.52%), Postives = 86/153 (56.21%), Query Frame = 0
Query:  478 FQDFVGSFLQQ--VPFEAVDVWVPLARQETG--GRVVLFHAGYFTN---------ELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVH-VNPALRAFIERTVRS 616
            F + + SF++Q  +PFE VD+WVP   +  G    + L+HAG  T           + E+GEYST FSF  G GLPGRV+ ++   W+  +H     +F R  GA   G++T FGVPVVS+     V+VFYS   VH + P L+  +ER V S
Sbjct:  402 FVEELVSFIEQENLPFEHVDLWVPSFAEGDGPGNEMRLYHAGQGTRGDLDASLYYRMCEYGEYSTKFSFAVGHGLPGRVYCTDKPSWERHIHEQDPKIFERAGGAKMYGVKTGFGVPVVSKSIGRIVVVFYS---VHDIQPDLQ-MMERIVAS 550          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCD8_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LER0_ECTSI6.340e-11639.51RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CDJ8_9STRA6.330e-8566.82RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5KFM7_9PHAE1.650e-6138.75RING-type domain-containing protein (Fragment) n=1... [more]
D8LLI7_ECTSI4.290e-5350.51RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JBQ8_9PHAE1.410e-5264.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLI8_ECTSI2.890e-4544.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3UXI5_HETAK9.280e-3847.85Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3UTL1_HETAK1.260e-1739.37Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z5KJS1_FISSO5.110e-1640.52Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029016GAF-like domain superfamilyGENE3D3.30.450.40coord: 474..601
e-value: 5.7E-6
score: 27.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..474
NoneNo IPR availablePANTHERPTHR35213FAMILY NOT NAMEDcoord: 62..158
coord: 524..600

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_176contigContig_176:278339..292298 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353661mRNA_16997Tribonema minus UTEX_B_3156 mRNAContig_176 278339..292298 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353661|estExt_Genemark1.C_Ctg_1760027 ID=Trimin1|353661|estExt_Genemark1.C_Ctg_1760027|Name=jgi.p|Trimin1|353661|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=625bp
MSMPFWTAHRIKLVLPTASAATRREAVVAVLAICMPEGLNLPDSEMLAAL
ERAAQSGGERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKL
ASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVS
ELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAW
SWNSNKRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTP
EGSTSSHAPGAINNMVSTHDGVHSMKLYHPTQQQQQAQQQQAAAMSDFYS
HVYHQHLVLPSAFNCPPNGANNTSTPNTWLMDLMDGLGGAGVNSSVSAAA
AADAEFHALHADALHGDMGGDDGIDMWSSLGNNLASIAFQNSAALGEGGD
ARRLLAGDAQQQQQLSGAACTHFDNRPADLTHGGDAQTVMDMDGAHVGGA
ASGGGGGLSRDDGPAEEEEDTEGGNELFQDFVGSFLQQVPFEAVDVWVPL
ARQETGGRVVLFHAGYFTNELEEWGEYSTNFSFEKGEGLPGRVFGSNTSE
WQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTV
HVNPALRAFIERTVRSWKFDANVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029016GAF-like_dom_sf