Trimin1|353630|estExt_Genemark1.C_Ctg_1740012 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353630
Unique NameTrimin1|353630|estExt_Genemark1.C_Ctg_1740012
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length174
Homology
BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: A0A835Z651_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z651_9STRA)

HSP 1 Score: 308 bits (788), Expect = 2.240e-105
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query:    1 MPRAPDSVNAADLQQRILDLRTREARRSKERTAEQSAEDAVMSEQXXXXXXXXXXXXXLMKRMRSAFVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVDSLRQRFNQLYSSPDDAW 173
            MPRAPDSVNAADLQQRILDLRTREARRSKERTAEQSAEDAVMSEQXXXXXXXXXXXXXLMKRMRSAFVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVDSLRQRFNQLYSSPDDAW
Sbjct:    1 MPRAPDSVNAADLQQRILDLRTREARRSKERTAEQSAEDAVMSEQXXXXXXXXXXXXXLMKRMRSAFVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVDSLRQRFNQLYSSPDDAW 173          
BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: A0A7S4D7C7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7C7_HETAK)

HSP 1 Score: 100 bits (249), Expect = 3.500e-22
Identity = 49/115 (42.61%), Postives = 75/115 (65.22%), Query Frame = 0
Query:   59 LMKRMRSAFVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVDSLRQRFNQLYSSPDDAW 173
            L+K ++  +VL++N G  +EGIYTL +  +NI LG+E++ EA +YA+MLKAQ+F  P+P+ +   E+  FC++S    ++VPKGS LTPPEAN  D +     ++     P  AW
Sbjct:  171 LLKSIKEVWVLLYNVGTDNEGIYTLSIGEENIALGWENKLEAQKYAMMLKAQDFFVPTPEMIPTEEMVIFCKDSNCLFEVVPKGSNLTPPEANVPDPE-----YDPSKVPPPPAW 280          
BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: K9TRH9_9CYAN (Uncharacterized protein n=2 Tax=Oscillatoriaceae TaxID=1892254 RepID=K9TRH9_9CYAN)

HSP 1 Score: 90.9 bits (224), Expect = 1.970e-20
Identity = 41/90 (45.56%), Postives = 64/90 (71.11%), Query Frame = 0
Query:   67 FVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVD 156
            FVL+FNP   +EGI+TL + ++N +L FES  +A RYAL+L+AQ+F SP+P+ L   E+++FCR++G   KL+ +G    PPE N  +++
Sbjct:    4 FVLLFNPRTENEGIHTLRIGDRNTILMFESEDDATRYALLLEAQDFASPTPEPLDSEEIEEFCRDAGYDSKLIHEGELAIPPETNLEELE 93          
BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: A0A8J6SU97_9CYAN (DUF3110 domain-containing protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6SU97_9CYAN)

HSP 1 Score: 90.5 bits (223), Expect = 3.650e-20
Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 0
Query:   67 FVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVDSLRQRFNQLYSSP 169
            FVL++N G  +EGI+TL + ++N+VL FE+  +A RYA+ML+AQ+F SP  + L+  E+++FC+ +G   KLVP GS   PPE N    D   +     +S P
Sbjct:    4 FVLLYNAGTENEGIHTLKIGDRNVVLMFETEDDATRYAMMLEAQDFGSPDVEGLEAEEVEEFCQSAGYESKLVPDGSLAVPPETNVDSPDWRPEADPPEFSEP 106          
BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: U5QKM3_9CYAN (Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 TaxID=1183438 RepID=U5QKM3_9CYAN)

HSP 1 Score: 89.4 bits (220), Expect = 8.060e-20
Identity = 47/119 (39.50%), Postives = 70/119 (58.82%), Query Frame = 0
Query:   67 FVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKT----------------DVDSLRQRFNQLYSSP 169
            +VLIFN G  +EGIYTL V ++NIV+ FES  +A+ YA +L+AQ+F  P  + ++  E+KQFC +S +GL +V  G  + PPE +K                 ++D +R    +LYS P
Sbjct:    4 WVLIFNAGSENEGIYTLSVQDKNIVVAFESEDDALCYANLLEAQDFMVPQVERIESEEIKQFCEDSDLGLIVVEAGKLMLPPEQSKEAFDWQPGQKSEERAGGELDRMRSMLERLYSKP 122          
BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: UPI0014081418 (DUF3110 domain-containing protein n=1 Tax=Aphanocapsa montana TaxID=327565 RepID=UPI0014081418)

HSP 1 Score: 89.0 bits (219), Expect = 1.170e-19
Identity = 48/120 (40.00%), Postives = 76/120 (63.33%), Query Frame = 0
Query:   67 FVLIFNPGQASEGIYTLWVNN-------QNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEAN--KTD------------VDSLRQRFNQL 165
            +VL+FN G ++EGI+TL + +       Q++VL FE   +A+R+AL+L+AQ+F SPS + +  AE+ +FCRESG+ ++ + KG+   PPEAN  KTD            +D +RQ+  +L
Sbjct:    4 YVLLFNTGTSNEGIHTLKIKDPEHEQLEQDVVLAFEEEDDAMRFALLLEAQDFPSPSVEAISEAEITEFCRESGLRMQFIAKGTLAVPPEANLEKTDWQRDEARTSESELDRIRQQLERL 123          
BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: A0A7C3VUB0_9CYAN (DUF3110 domain-containing protein n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A7C3VUB0_9CYAN)

HSP 1 Score: 88.6 bits (218), Expect = 1.940e-19
Identity = 42/103 (40.78%), Postives = 70/103 (67.96%), Query Frame = 0
Query:   67 FVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVDSLRQRFNQLYSSP 169
            FVL+FN    +EGI+TL + ++N+VL FES  +A RYA+ML+AQ+F +P+P+ +   E+++FC+++G   +LVP+G+   PPE+N    D    +  +  +SP
Sbjct:    4 FVLLFNARTENEGIHTLRMGDRNVVLMFESEDDAARYAMMLEAQDFGAPTPEGIDSEEVEEFCQDAGYESQLVPEGALAIPPESNVEQPDWEPDKPPETAASP 106          
BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: UPI0016883DBE (DUF3110 domain-containing protein n=1 Tax=unclassified Leptolyngbya TaxID=2650499 RepID=UPI0016883DBE)

HSP 1 Score: 87.8 bits (216), Expect = 3.380e-19
Identity = 43/92 (46.74%), Postives = 66/92 (71.74%), Query Frame = 0
Query:   67 FVLIFNPGQASEGIYTLWV--NNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVD 156
            +VL+FNPG  +EGIYTL +  +++N+VL FES ++A RY L+L+AQ+F SPS + ++  E+++FC E+     LVP+G+   PPE N  DV+
Sbjct:    4 YVLLFNPGTENEGIYTLKMQEDDRNVVLMFESEEDATRYGLLLEAQDFLSPSVEPIESEEVEEFCEEAEYECVLVPEGTLAIPPETNLDDVE 95          
BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: A0A8J7K656_9CYAN (DUF3110 domain-containing protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A8J7K656_9CYAN)

HSP 1 Score: 87.8 bits (216), Expect = 3.660e-19
Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 0
Query:   67 FVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVD 156
            FVL+FN    +EGI+TL VN  N+VL FES  +A+RY LML+AQ+F SP+ +     E+++FC+ +G   KLVP G+   PPE N    D
Sbjct:    4 FVLLFNARTENEGIHTLKVNGDNVVLMFESEDDALRYGLMLEAQDFASPTAEAFDQEEIEEFCQGAGYECKLVPAGTLAIPPETNVDQTD 93          
BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: A0A846FF03_9CYAN (DUF3110 domain-containing protein n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FF03_9CYAN)

HSP 1 Score: 87.8 bits (216), Expect = 4.280e-19
Identity = 44/92 (47.83%), Postives = 64/92 (69.57%), Query Frame = 0
Query:   67 FVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEAN--KTDVD 156
            FVL+FN    +EGI+TL VN +N+VL FE+  +A+RY LML+AQ+  +P+ + +  AE+++FC+ +G   KLVP G+   PPE N  KTD D
Sbjct:    4 FVLLFNARTENEGIHTLKVNGRNVVLMFEAEDDAIRYGLMLEAQDLPTPTVEVIDAAEIEEFCQTAGYEFKLVPDGTLEMPPETNVEKTDWD 95          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353630 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z651_9STRA2.240e-105100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D7C7_HETAK3.500e-2242.61Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K9TRH9_9CYAN1.970e-2045.56Uncharacterized protein n=2 Tax=Oscillatoriaceae T... [more]
A0A8J6SU97_9CYAN3.650e-2042.72DUF3110 domain-containing protein n=4 Tax=Cyanobac... [more]
U5QKM3_9CYAN8.060e-2039.50Uncharacterized protein n=1 Tax=Gloeobacter kilaue... [more]
UPI00140814181.170e-1940.00DUF3110 domain-containing protein n=1 Tax=Aphanoca... [more]
A0A7C3VUB0_9CYAN1.940e-1940.78DUF3110 domain-containing protein n=2 Tax=Oscillat... [more]
UPI0016883DBE3.380e-1946.74DUF3110 domain-containing protein n=1 Tax=unclassi... [more]
A0A8J7K656_9CYAN3.660e-1947.78DUF3110 domain-containing protein n=2 Tax=Pseudana... [more]
A0A846FF03_9CYAN4.280e-1947.83DUF3110 domain-containing protein n=1 Tax=Cyanothe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021503Protein of unknown function DUF3110PFAMPF11360DUF3110coord: 67..149
e-value: 1.8E-27
score: 95.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_174contigContig_174:106843..114661 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353630mRNA_16388Tribonema minus UTEX_B_3156 mRNAContig_174 106348..114686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353630|estExt_Genemark1.C_Ctg_1740012 ID=Trimin1|353630|estExt_Genemark1.C_Ctg_1740012|Name=jgi.p|Trimin1|353630|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=174bp
MPRAPDSVNAADLQQRILDLRTREARRSKERTAEQSAEDAVMSEQKSAED
AMMSEQKALMKRMRSAFVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEA
VRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEA
NKTDVDSLRQRFNQLYSSPDDAW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021503DUF3110