mRNA_16388 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353630
Unique Name	mRNA_16388
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: A0A835Z651_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z651_9STRA)

HSP 1 Score: 308 bits (789), Expect = 1.100e-102
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 2

Query:   26 MPRAPDSVNAADLQQRILDLRTREARRSKERTAEQSAEDAVMSEQXXXXXXXXXXXXXLMKRMRSAFVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVDSLRQRFNQLYSSPDDAW 544
            MPRAPDSVNAADLQQRILDLRTREARRSKERTAEQSAEDAVMSEQXXXXXXXXXXXXXLMKRMRSAFVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVDSLRQRFNQLYSSPDDAW
Sbjct:    1 MPRAPDSVNAADLQQRILDLRTREARRSKERTAEQSAEDAVMSEQXXXXXXXXXXXXXLMKRMRSAFVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVDSLRQRFNQLYSSPDDAW 173

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BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: A0A7S4D7C7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7C7_HETAK)

HSP 1 Score: 100 bits (249), Expect = 2.110e-20
Identity = 49/115 (42.61%), Postives = 75/115 (65.22%), Query Frame = 2

Query:  200 LMKRMRSAFVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVDSLRQRFNQLYSSPDDAW 544
            L+K ++  +VL++N G  +EGIYTL +  +NI LG+E++ EA +YA+MLKAQ+F  P+P+ +   E+  FC++S    ++VPKGS LTPPEAN  D +     ++     P  AW
Sbjct:  171 LLKSIKEVWVLLYNVGTDNEGIYTLSIGEENIALGWENKLEAQKYAMMLKAQDFFVPTPEMIPTEEMVIFCKDSNCLFEVVPKGSNLTPPEANVPDPE-----YDPSKVPPPPAW 280

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BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: K9TRH9_9CYAN (Uncharacterized protein n=2 Tax=Oscillatoriaceae TaxID=1892254 RepID=K9TRH9_9CYAN)

HSP 1 Score: 90.9 bits (224), Expect = 7.880e-19
Identity = 41/90 (45.56%), Postives = 64/90 (71.11%), Query Frame = 2

Query:  224 FVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVD 493
            FVL+FNP   +EGI+TL + ++N +L FES  +A RYAL+L+AQ+F SP+P+ L   E+++FCR++G   KL+ +G    PPE N  +++
Sbjct:    4 FVLLFNPRTENEGIHTLRIGDRNTILMFESEDDATRYALLLEAQDFASPTPEPLDSEEIEEFCRDAGYDSKLIHEGELAIPPETNLEELE 93

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BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: A0A8J6SU97_9CYAN (DUF3110 domain-containing protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6SU97_9CYAN)

HSP 1 Score: 90.1 bits (222), Expect = 1.990e-18
Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 2

Query:  224 FVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVDSLRQRFNQLYSSP 532
            FVL++N G  +EGI+TL + ++N+VL FE+  +A RYA+ML+AQ+F SP  + L+  E+++FC+ +G   KLVP GS   PPE N    D   +     +S P
Sbjct:    4 FVLLYNAGTENEGIHTLKIGDRNVVLMFETEDDATRYAMMLEAQDFGSPDVEGLEAEEVEEFCQSAGYESKLVPDGSLAVPPETNVDSPDWRPEADPPEFSEP 106

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BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: U5QKM3_9CYAN (Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 TaxID=1183438 RepID=U5QKM3_9CYAN)

HSP 1 Score: 89.0 bits (219), Expect = 4.190e-18
Identity = 47/119 (39.50%), Postives = 70/119 (58.82%), Query Frame = 2

Query:  224 FVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKT----------------DVDSLRQRFNQLYSSP 532
            +VLIFN G  +EGIYTL V ++NIV+ FES  +A+ YA +L+AQ+F  P  + ++  E+KQFC +S +GL +V  G  + PPE +K                 ++D +R    +LYS P
Sbjct:    4 WVLIFNAGSENEGIYTLSVQDKNIVVAFESEDDALCYANLLEAQDFMVPQVERIESEEIKQFCEDSDLGLIVVEAGKLMLPPEQSKEAFDWQPGQKSEERAGGELDRMRSMLERLYSKP 122

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BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: UPI0014081418 (DUF3110 domain-containing protein n=1 Tax=Aphanocapsa montana TaxID=327565 RepID=UPI0014081418)

HSP 1 Score: 88.6 bits (218), Expect = 5.970e-18
Identity = 48/120 (40.00%), Postives = 76/120 (63.33%), Query Frame = 2

Query:  224 FVLIFNPGQASEGIYTLWVNN-------QNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEAN--KTD------------VDSLRQRFNQL 520
            +VL+FN G ++EGI+TL + +       Q++VL FE   +A+R+AL+L+AQ+F SPS + +  AE+ +FCRESG+ ++ + KG+   PPEAN  KTD            +D +RQ+  +L
Sbjct:    4 YVLLFNTGTSNEGIHTLKIKDPEHEQLEQDVVLAFEEEDDAMRFALLLEAQDFPSPSVEAISEAEITEFCRESGLRMQFIAKGTLAVPPEANLEKTDWQRDEARTSESELDRIRQQLERL 123

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BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: A0A7C3VUB0_9CYAN (DUF3110 domain-containing protein n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A7C3VUB0_9CYAN)

HSP 1 Score: 88.6 bits (218), Expect = 7.020e-18
Identity = 42/105 (40.00%), Postives = 71/105 (67.62%), Query Frame = 2

Query:  224 FVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVDSLRQRFNQLYSSPDD 538
            FVL+FN    +EGI+TL + ++N+VL FES  +A RYA+ML+AQ+F +P+P+ +   E+++FC+++G   +LVP+G+   PPE+N    D    +  +  +SP +
Sbjct:    4 FVLLFNARTENEGIHTLRMGDRNVVLMFESEDDAARYAMMLEAQDFGAPTPEGIDSEEVEEFCQDAGYESQLVPEGALAIPPESNVEQPDWEPDKPPETAASPPE 108

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BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: UPI0016883DBE (DUF3110 domain-containing protein n=1 Tax=unclassified Leptolyngbya TaxID=2650499 RepID=UPI0016883DBE)

HSP 1 Score: 87.8 bits (216), Expect = 1.180e-17
Identity = 43/92 (46.74%), Postives = 66/92 (71.74%), Query Frame = 2

Query:  224 FVLIFNPGQASEGIYTLWV--NNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVD 493
            +VL+FNPG  +EGIYTL +  +++N+VL FES ++A RY L+L+AQ+F SPS + ++  E+++FC E+     LVP+G+   PPE N  DV+
Sbjct:    4 YVLLFNPGTENEGIYTLKMQEDDRNVVLMFESEEDATRYGLLLEAQDFLSPSVEPIESEEVEEFCEEAEYECVLVPEGTLAIPPETNLDDVE 95

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BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: A0A8J7K656_9CYAN (DUF3110 domain-containing protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A8J7K656_9CYAN)

HSP 1 Score: 87.8 bits (216), Expect = 1.280e-17
Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 2

Query:  224 FVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEANKTDVD 493
            FVL+FN    +EGI+TL VN  N+VL FES  +A+RY LML+AQ+F SP+ +     E+++FC+ +G   KLVP G+   PPE N    D
Sbjct:    4 FVLLFNARTENEGIHTLKVNGDNVVLMFESEDDALRYGLMLEAQDFASPTAEAFDQEEIEEFCQGAGYECKLVPAGTLAIPPETNVDQTD 93

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BLAST of jgi.p|Trimin1|353630 vs. uniprot
Match: A0A846FF03_9CYAN (DUF3110 domain-containing protein n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FF03_9CYAN)

HSP 1 Score: 87.8 bits (216), Expect = 1.500e-17
Identity = 44/92 (47.83%), Postives = 64/92 (69.57%), Query Frame = 2

Query:  224 FVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEAVRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEAN--KTDVD 493
            FVL+FN    +EGI+TL VN +N+VL FE+  +A+RY LML+AQ+  +P+ + +  AE+++FC+ +G   KLVP G+   PPE N  KTD D
Sbjct:    4 FVLLFNARTENEGIHTLKVNGRNVVLMFEAEDDAIRYGLMLEAQDLPTPTVEVIDAAEIEEFCQTAGYEFKLVPDGTLEMPPETNVEKTDWD 95

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353630 vs. uniprot

BLAST of jgi.p|Trimin1|353630 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z651_9STRA	1.100e-102	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S4D7C7_HETAK	2.110e-20	42.61	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
K9TRH9_9CYAN	7.880e-19	45.56	Uncharacterized protein n=2 Tax=Oscillatoriaceae T...	[more]
A0A8J6SU97_9CYAN	1.990e-18	42.72	DUF3110 domain-containing protein n=4 Tax=Cyanobac...	[more]
U5QKM3_9CYAN	4.190e-18	39.50	Uncharacterized protein n=1 Tax=Gloeobacter kilaue...	[more]
UPI0014081418	5.970e-18	40.00	DUF3110 domain-containing protein n=1 Tax=Aphanoca...	[more]
A0A7C3VUB0_9CYAN	7.020e-18	40.00	DUF3110 domain-containing protein n=2 Tax=Oscillat...	[more]
UPI0016883DBE	1.180e-17	46.74	DUF3110 domain-containing protein n=1 Tax=unclassi...	[more]
A0A8J7K656_9CYAN	1.280e-17	47.78	DUF3110 domain-containing protein n=2 Tax=Pseudana...	[more]
A0A846FF03_9CYAN	1.500e-17	47.83	DUF3110 domain-containing protein n=1 Tax=Cyanothe...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_174	contig	Contig_174:106348..114686 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353630\|estExt_Genemark1.C_Ctg_1740012
Description	Protein of unknown function (DUF3110)
COG category	S
Max annot lvl	1117\|Cyanobacteria
EggNOG OGs	COG0457@1\|root,COG0457@2\|Bacteria,1G70P@1117\|Cyanobacteria,1HBHQ@1150\|Oscillatoriales
Evalue	3.23e-21
Seed ortholog	56110.Oscil6304_5690
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Protein of unknown function DUF3110
Ec32 ortholog	Ec-12_004380.1
TranscriptId	353952
Track	FilteredModels1
ProteinId	353630

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353630	gene_16388	Tribonema minus UTEX_B_3156	gene	Contig_174 106348..114686 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353630	Trimin1\|353630\|estExt_Genemark1.C_Ctg_1740012	Tribonema minus UTEX_B_3156	polypeptide	Contig_174 106843..114661 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16388_7	exon_16388_7	Tribonema minus UTEX_B_3156	exon	Contig_174 106348..106908 -
exon_16388_6	exon_16388_6	Tribonema minus UTEX_B_3156	exon	Contig_174 109250..109336 -
exon_16388_5	exon_16388_5	Tribonema minus UTEX_B_3156	exon	Contig_174 110262..110340 -
exon_16388_4	exon_16388_4	Tribonema minus UTEX_B_3156	exon	Contig_174 110920..111038 -
exon_16388_3	exon_16388_3	Tribonema minus UTEX_B_3156	exon	Contig_174 113315..113347 -
exon_16388_2	exon_16388_2	Tribonema minus UTEX_B_3156	exon	Contig_174 113410..113526 -
exon_16388_1	exon_16388_1	Tribonema minus UTEX_B_3156	exon	Contig_174 114641..114686 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_16388	UTR3_16388	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_174 106348..106842 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16388	CDS_16388	Tribonema minus UTEX_B_3156	CDS	Contig_174 114641..114661 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_16388	UTR5_16388	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_174 114662..114686 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_174:106348..114686-
coding sequence from alignment at Contig_174:106348..114686-

spliced messenger RNA

>mRNA_16388 ID=mRNA_16388|Name=jgi.p|Trimin1|353630|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1042bp|location=Sequence derived from alignment at Contig_174:106348..114686- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTCATTTGGAGGGGAGGGAGACACTATGCCTAGGGCCCCAGACAGCGTCA
ACGCGGCGGACTTGCAGCAGCGCATCTTGGATCTGCGGACGCGGGAGGCG
CGGCGCTCTAAGGAACGCACTGCGGAACAGTCTGCAGAGGACGCCGTGAT
GAGCGAACAAAAGTCCGCGGAGGATGCCATGATGAGCGAACAAAAGGCTC
TGATGAAGCGGATGCGCAGTGCGTTTGTCCTCATCTTCAACCCCGGGCAG
GCCAGCGAAGGCATCTACACCCTCTGGGTCAACAACCAGAACATTGTTCT
CGGCTTCGAATCCAGGCAGGAGGCGGTGAGGTACGCGCTGATGCTGAAGG
CGCAGGAGTTCCACAGCCCATCGCCGCAGGAGCTGAAGCTAGCTGAACTG
AAGCAGTTCTGCAGAGAGTCTGGAGTGGGCCTCAAGCTGGTGCCCAAGGG
CTCAGGGCTCACACCGCCGGAGGCAAACAAGACGGACGTGGACTCGCTGC
GTCAGCGCTTCAACCAGCTGTACTCCAGCCCCGATGACGCATGGTGAGCG
CTGCCACGCCGGGCAGTGACTCTCCCACAGGGAGAAGTCACGCTCCAACT
TCAACTTTCATGTCAACGCCAGTGCCATTAGCAACGGATAGAGACAAGAG
AGAGAGAGAGAGATGGAAGGAGAATTGGCTCTGGTGGTTATGGTACCCTA
CATCAGATCAGAACGAGCGAATGGCAGAGCGACCGCCGCCTGAGAGTCCC
TGGACATGAGGGGCTTGAAGTTCGTACTTCAAAGGTGACGGGGAGCTAAT
GTATGTGGAGAGAGAGAGAGAGAGACAGTCATAAAGGCGGTGCACAACGT
GAAGGGGCCTGTGCATGTGTGCTGGTCTGTGTGATAACCGCTGGGCAAAG
AGCACCTGTAAGTACATTACGAGCATAGACAGAGAGAGCGCGCCACTTTA
GCACGCGCCAGCAACGCTGCTGCTGCGCCTAGAGGAGTGAGAGTCGGAGT
CAGAGTGGTCATTCCGTTTTCTGTGTAATGGACACACACGTT

protein sequence of jgi.p|Trimin1|353630

>Trimin1|353630|estExt_Genemark1.C_Ctg_1740012 ID=Trimin1|353630|estExt_Genemark1.C_Ctg_1740012|Name=jgi.p|Trimin1|353630|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=174bp
MPRAPDSVNAADLQQRILDLRTREARRSKERTAEQSAEDAVMSEQKSAED
AMMSEQKALMKRMRSAFVLIFNPGQASEGIYTLWVNNQNIVLGFESRQEA
VRYALMLKAQEFHSPSPQELKLAELKQFCRESGVGLKLVPKGSGLTPPEA
NKTDVDSLRQRFNQLYSSPDDAW*

mRNA from alignment at Contig_174:106348..114686-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16388 ID=mRNA_16388|Name=jgi.p|Trimin1|353630|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8339bp|location=Sequence derived from alignment at Contig_174:106348..114686- (Tribonema minus UTEX_B_3156 )
CTCATTTGGAGGGGAGGGAGACACTATGCCTAGGGCCCCAGACAGCGTAA
GTGACAGCGTGAGTTAGTGCTGCTGGGAGACTTGAGTTTTTTCACTTGTT
GAAGCTCATTCTATCATGTCAAATTGCTCTCAAGGGCAGTGGTTAAACCC
ACCATGGAACAGGGGGTGTGGGGGGCTCAATTGCGTCGTGAGGGGGGTGG
CGGCAGGACTAGGGGGGTGGGGGGGAGGGGGGAGGGACGTACCAGGATTG
ATCTAATTTTCTGCTGTAAAACATACAGTCACAAGAGGCTGAGGGAAAAT
GAGACGAAAAGCAATGAGTGCCGTGCACAGTTGAAGTTAGGCAGCCGAGG
CTGCATGTTCTTGAAGTTCCAACTGAACTGGCGCAAGCAAGTGCTCTGAG
CGCTGCTGCTAATTGCGGGCATCTATCGCGCAGCGACTTCGGTGTTTGGC
GTGTCCGGACCTCCAGCGTGGCAACTTGCTTTGGTAGGCTGCTGGATGAG
ATTTTTTTTTTCCATTTTCCGACCAAACTTATCGCTTCAAGCTCATTGAT
CGGATGTGCGTATGTTCTTTGAATTGCCAGTAGCCTGTAATACGCGCGCT
GTTACATGCGGCAGACTTGTAGCAGCGCGTTCAGGGTGACACTGGTACCA
GCCTCAGCGCTGCCACGTTTCTGCCAAATGTATACATAAAGACGCACAGG
AGAATGCGGCGGACCTGCAGCAGAAGCGCAATTAGGTTGAAGCAAGCGTG
TATACCTGCCTACCCCTGTTGGCGCTGACAAAATTATGCCATGCACACAA
ACACACGCATGCCATGATTAAGAACACGGTCGTTGGTTGAAGGCACTGGC
GGCTCACCACACTTTGTCACCTAGAGCTCTACGATCTTTTGATTAGTTTC
CATTGACACATAACATGTCCGCGCGCATCAAGATCAAGCGCTTATGCCTA
CCCCTGGTGGCGCTGACACACTCTTGCCATGCACACAAGCACATGCATGC
CATGCATCGTCAACACATACATGTGCGCGCAAATCACAACAAGCGCTTAC
ACCTGCTCACTGCTGTGGGCGCTGACACGCTTTACTTTTGCCATGCATAC
ACATACTTGTAAATAAACATATATATATATATATATATATATACACACAC
GTGTGCGCAGGTCAACGCGGCGGACTTGCAGCAGCGCATCTTGGATCTGC
GGACGCGGGAGGCGCGGCGCTCTAAGGAACGCACTGCGGAACAGTCTGCA
GAGGACGCCGTGATGAGCGAACAAAAGGTAAGTCGAGGTTGACGCTCCGT
GCGCTGAAGTTACGCTCCAAGGAACGCGCTGCGGAACAGTCCGCGGAGGA
TGCCATGATGAGCGAACAAAAGGTATGTTGACATTTCGTGCGCTGAAGTG
GACGTTCCATGCGCTGAGTGCATTGAGGTTGACGCTCCATACGCTGAGGC
TGACGTTCCATGCGCTGAGCTTGACGCTGCATGCATTCAGGTTGACGCTC
CGGTAGCGCTTCTGCTGCTTCAGCTCTTCTGGAGCGAGGGACCTAGTTCT
GCATCATAGAGGTGCAGTAGGAATTGCTGAGAATCCGCTGCGGAACAGTC
AGATGAGAATGCCGTGATGAGCGAACGAAAGGTAAGTTGGGGTTGACGTT
CCACGCGCGCAGGTTACGCTCCAAAGAACTCGCGGCGAAACAATCTGCGG
AGGATGCTGTAATGAGCAAAATATAAGTTGAGGTTGACGCTCCTGCTGCT
CGAGTTCGCGAGGAGTGCTGTGATGATGTCTGTTGGTTTGGCACCGATGG
CCTCCAGCATACCCCGGTCGCCGCAGCTGAGTCGTGGTGCATTTGTTGAG
CGATGTGCACGGGGGGACAGCGGGAACTGCTCGCACTGCTATGAGTCAAA
CGGAAGTTACCACAGAACAAACCAGGCGAGATGCTGCAAGTGGAAGTGCA
GAATTGTGGGTTGAAGCTGACTCTACACCCGTCGACCCTTCCGTGAAGTA
TCTGGAGTTGCTGCTTGCATGGCTGTGTTGCCTAAGTACACTCAAAAGTG
CTGGGATATACAGCAAGACTTCAGGTTTCCTCAGCGATGCATACCCCGAT
ACATATATACATACCTGCGCTGCGTTGCGATTGCCCTGCTGTAGCAGCAG
CCAAAAATGCGAACGCCACCAGGTAGGTTTATAGACCAGGGCTTCCTCAG
GTTAGGGCCAGGTTTTGGGTTGAAACGGCAACTCTTCAATGATACCATCA
TGCCCAGAAGAATCGAGCAACTGAATACGTAAGCGGTACTGGTACTGATG
GCTTTGTCAGGTTTGAACAGCAGACTCCGCCGTTGTTTCAGAGTGCCACA
AGTAACTTCCCTGCTGATTGGCTGTACATGCTTTGCCATGACCTTTGTGC
ATGGCGTCGCCGGTCTCCATACACTGCTTTGCCCGCTATCACTTTACAGC
AAACTTCAAGCGTCTTGAAGCTGCAGTTACTTAATAACAAGTACACACAC
GGAACCTCAAGTCTGCCCTGAGTTCATTTTTCAACTTGAAGTGAATACAT
GATTACTTCCAATCTCTGTTTTTCAGCACACAATTGTAATGACCTAGCTC
TTTTGAATTTCATGCTCCTCACCTAGATCACCTCCATCTTGAATGCAAGC
CATTGAATTGAATTAACACACATGCCACCACGCAAACTTCAACCTGTCGC
AAGCGCTGTTGAAGCGGATATGCAGTGCATTTGTCCTCAACTTCAACCCG
TGCACTCGGCCTTGGTAAGCCAAGTCATTGAAGTCACCACATGCCAACTT
CAATGTGCTGCAGTTACTTAATAACAAGTACACACACGGAACCTCAAGTC
TGCCCTGAGTTCATTTTTCAACTTGAAGTGAATACATGATTACTTCCAAT
CTCTGTTTTTCAGCACACAATTGTAATGACCTAGCTCTTTTGAATTTCAT
GCTCCTCACCTAGATCACCTCCATCTTGAATGCAAGCCATTGAATTGAAT
TAACACACATGCCACCACGCAAACTTCAGCCTGTCGCAAGCGCTGTTGAA
GCTGATATGCAGTGCATTTGTCCTCAACTTCAACCCGTGCACTCGGCCTT
GGTAAGCCAAGTCATTGAAGTCACCACATGCCAACTTCAATGTGCTGCAG
GCCCTGCCGGGCACTTGCCCTTCTGAAAGACTAGTCATTTGAATCACCGC
ATGCCAACTTCAATTTGTTGCAGGCTTTGATGAAGCGGACGTGCAGTGCG
TTTGTCCTCATTTTAAACTGGGCACTCGCCCTTTCCCTCATCTTCCATCG
CAGATCTGAACGTTCAGGAGGATTAAGTACTGATCATGTTACATTTGCTG
CACGAGATATTCATCCGACACAATACGGCCGTTTATGTCCTAGTACTTTC
CTTTAAGTAATTTATACGAATCATTACTTTTTTTATCTTGGACGTTATTG
TTCCGTAAACGAGATATTATCTTTTTTAATACAGGCTAGATCAACTTGAG
ACGCAGGAAATGGCCTGAAAACAAATCTTAGTAGAGCCTGTTTTTGCGAT
AAACAGGTCATTGAAGTCACCACATATGAACCCGCGCACTCGCCCTTTTG
GAAGACAAGTCATTGAAGTCACCGCATGCCAACTTCAACTTGTTGCAGGC
TCTGATGAAGCGGATGCGCAGTGCGTTTGTCCTCATCTTCAACCCCGGGC
AGGCCAGCGAAGGCATCTACACCCTCTGGGTCAACAACCAGAACATTGTT
CTCGGCTTCGAATCCAGGTAAACGGATCAGGGTTAGCTGCAGATTGCGCC
TTTGAAACTTGCACTAGCAACAGGCGGGCAGTTTTTGCGACGCACTGCTT
GCAACTATCTACATGGCAGTGAGCTGTGGCCAGTCTCACATAATTGAACA
TCGCATGCCCTGACTGGGTGTCATGTTATGCGGTGTGTGTGTTGCATGAC
TATACAAGAAGGCAACATTTCGAGCATCTGCAATTGACTTGTGCAATGAA
AGCGGCTGCGCAGTGCCGCAGTGAAGCGTTAGCCATGGTGCTTGCAACAA
TCGTCACACATGTGCTTGTTCGTCCGTGTACTCTGAAGCGAAGCATCCAA
GTCTATCCATGCACATCAATAATACATCATGTATTCTGCTAGTACCCTTC
AAAGCGAATGATGCGTATACAAGCCGCACATGCAGGTATGCATGTTCACA
ACCAATTTCATGTGCGCACGCGGCGCACAATATACCAACACGAAGCACGC
ATGGTGATATATCTGAACAATGTGCCTATATGATGCATTCTATGGTTCTT
ACTCTGTGGCCCTGCGCACGCTGTTCCTCACGCGATGCGTGTGCAGGCAG
GAGGCGGTGAGGTACGCGCTGATGCTGAAGGCGCAGGAGTTCCACAGCCC
ATCGCCGCAGGAGCTGAAGCTAGCTGTGAGTACAATCAACACACACAGAC
TCTCAAATATTCAGTGAACTAATAAAATCACCAGCGGATTTTTTGGTGTA
TACCTTGAAGTTTGGTTCAAGACTGCCGTCGGTCCTGTAGCGTTGGGCTG
TGCAGGTATGCCTATGCAAATATTCCCCAAGGAAAGGCACATGACAGGCT
TACAGGTACTCAATTGAGCATCACCTTGTCAAGGAGAGTTCTTTTTTTTT
CTTGTATTTTAAAAGACTGCCGGGGTCATGTACCAGGTGGTTAGGCCTAC
TTCAAAATTGAAGTATCATATGTAAAGCGCAGGAGCTCCACAGTCTATCG
ATGCAGGAGCCGGAGCTAGCTGTGAGTACATACACAGGTTCACATTATTT
CATGAAGCATTTTTAACCAAGGGCAGTGGGGGAGTTCTTCAAATGTATGT
GTTTTCCAAGACTGCCGTCGGTCTCTCAGCGCTGTGCAGGCAACAGCAGC
ACCGTGGACGCCAACTTGGTGAGGTTGCAGGAGTTTGACCCGGGAGCTGG
TCTCGGTGACTGGTACAACAAAAGACGTGAACGCAGAATAGTGTATGGCG
CGATACTGTTTGTTTTAGAGTCACATCTGGTTCAAAAGCAGGCTGTTGTG
CTGGTTCCCCAAATGTGGAGCTTTCAAGTCTCGATTTGAAGTACTTGGTC
GTCGGGAAAGGCGCAGGTGGTGGCGAGCGAATCATTTGTTGGAGCCCGGG
GATGCAGTATCACCCTTACAACAGCAGTGCGATGGTGTATGACTGTCAGC
ATCATCGGCTTCAACATTACGGCAGGTGGCATCAAATTAGAGCTGCACTG
ACCTTGTTTTTCATCGGCAAACCTAGCTGCGTTGTAGCACATATTGGTCC
TAATGGCATTGTTGTCCGCTGTGTGCGCAAAAATGTTTGTCGTTTGTCAG
GAACTGAAGCAGTTCTGCAGAGAGTCTGGAGTGGGCCTCAAGCTGGTGCC
CAAGGGCTCAGGGCTCACACCGCCGGAGGCAAACAAGGTATGCAGTCATG
CTTGGACATTTCCACTGCAGCCTGGGTTGGAATAGATGCTATGGCTAGGG
GGTGACAGAAAGCGCTGACAGATGCACGTGTCTGAGCTTGTGCCCATGTC
CAACAAAGCTTGTGCCCATGTCCAACAAACGTGATGACAGCCTAGGCTGA
AATAGACTACGGTTAGGGGTAGGGGGTAGGGGGTTTCATGAAGTGCTGGC
AGATGCATGTGCTTGCGCTTGTGCAAACGTTCATGACAACGTGCTGACAA
GTGTACTTGACAGAGTTTTGTTGAAATCGTGCAAACACTGAGGCATTGGC
TACATCAGTTGAACTCACAAGCTCACATCGATCAGCAGCAGCAACCTGAC
ACCCGCTTCTCTGCCTCTCCCCCCGTGCGCATTGTTACCGTTGCACATGG
CGGTTACACGTGCAACCGCTCAACTTTTGAAAATACTAAGACATAGGCTA
ACACCACTTCACAGAGCGTGCATTGAGGAGCAGATGTACTTCAACATCTA
ATTTTCTGTGCCCCCCCCTGTGTGCTTTGTCACTGCAGCCTGAGTTGGAG
TACGATCCCATCGAACATGCTTCTTCTAAGCGACGACAACATCTGCGCCA
GGGGGACCCCCTCCTCTCACAGGTACTCAATGATTTAATAAACTAAGTGC
TCTGCCAACCACGTTGTTGACATGCTTGAGACAAACGTGATGCTGCCGCC
GCTGCATCAATGCGCTTGTACGTATATAAATGGGTTCGAAGTAATTACGT
ATGTATAGGGTTGCCGGCCAGCGTATAATGGGATTTCCTATATGGCGTAT
AACGTATAATTATAACGTATATATAATCTATACTGCGTATAGCAACGTAT
ATTAATTAGCCAAAATCTGAAGACAACCTTCGATTGAATTTTTTTTTCTT
TACGCACAATTGTGTCAATCTTCAAGAGTCCAGAACACCCGTCATATTCT
GCTAGTTCAAGCATACCTGGAAGTTAGCAGCATTGCCACTTGTTCAACTT
TGCTGCCATACCAAACAACCAGCATTAATGTGTGCACCCACGCATGCACT
GTATGCGCCTTGTACTCCAGATTTCAACACGATGCTAGGCTTGTTCTTGT
AAGTAAATACTGCACAAACAGTGGTGCTGCACATGTCATGGCATAGCAGC
TGCCAATGCACATGGTCAGACTCAGGTGCATCACAGCCAGTCACCAGCAG
CAATTCGAACACCAAGTATAGTCGGTCCATGCAATGCAGTGCATGCTCAA
CATACTTCGATCTATCTCAACAGTACTGTTCACCAGGCACCAAGCATGAC
ATCAAAAATTGATCCCTGCAAAACGACTGTAGTTTTAAAAAACAAACTGA
ACCATCTTCCATCTGTCCAGTGTGCGAATAAACAGCTTTCGTCATGTTCA
ACATCAGAAGTTGAAGTTCTGGGAAGTTTGATCCGTCACCTGTACGACCT
CAGCACACACGCCACGAACCACCATAGCTGCAGAGGCCTCCGCATAGCTG
ATGATGACCGTAGCCTCACATTCGTCACGCATACCATGCGTTGAGGAGGC
GTTGTGGAGCAGCAAGCCAGGCTTGTGCTGGGAGGTGATGGCTGCAGCTG
ATTGAATGGACCAGTGAGTGCAGCCCACTGACTACAGCGTGCAGGTGTTG
AGGTATCGAAATGTTCCGACCCTTCAGATGCTTCGTTTAACGCAGGAGCG
TGCGGCAGCAGCTCTACGCTGCTTCCGCATCGCGGAAACACGCCGTATGC
GGCAAAACAGTCATTATAATCCAAAGCGTACATCGAAATCGATATAACGA
TTATTATAACGCATATATACCTATAACGTATAATATAATATACGTTATAC
GCAGTTGGCAACCCTACGTATGTATGTAAGCACTGAGCATGCCTCTTCTA
AGCGACGACAACTTCTGTGCCAGAGGGACCCTCTCCTCTCACAGGTAATT
GAATGTTTCAATGAACCAATTGCGCAGCCTACCACGTTGCTGACAGGCTC
GAGACAAATGTGATGTTGTTGACAAGCTCGAGTCAATTGTGATGCTGCGG
CAGCCGCATTCATACACGTGTATGCATGCACTGAGCATATGCAGGCCTCC
GTGAACAAGCCCTCTGCCTGCCTTCACCGTTTGCAGAACAGCAAGCAGCT
GTGATGTCGAAGCACGCGTGTGCATGCATCTCTCTGCAGCAGAACAGACC
CACACTGTTTCACTCTGTTCAGCTTCAAACTTCAAACTCTGCCTCTCCTC
CTGAGGCACGTGACAGCCTGTCGGCTTCTGTGTGGTGTACCAAGTACTGA
CCTTAACTTCAACTGTTTGTGGTGTCAGACGGACGTGGACTCGCTGCGTC
AGCGCTTCAACCAGCTGTACTCCAGCCCCGATGACGCATGGTGAGCGCTG
CCACGCCGGGCAGTGACTCTCCCACAGGGAGAAGTCACGCTCCAACTTCA
ACTTTCATGTCAACGCCAGTGCCATTAGCAACGGATAGAGACAAGAGAGA
GAGAGAGAGATGGAAGGAGAATTGGCTCTGGTGGTTATGGTACCCTACAT
CAGATCAGAACGAGCGAATGGCAGAGCGACCGCCGCCTGAGAGTCCCTGG
ACATGAGGGGCTTGAAGTTCGTACTTCAAAGGTGACGGGGAGCTAATGTA
TGTGGAGAGAGAGAGAGAGAGACAGTCATAAAGGCGGTGCACAACGTGAA
GGGGCCTGTGCATGTGTGCTGGTCTGTGTGATAACCGCTGGGCAAAGAGC
ACCTGTAAGTACATTACGAGCATAGACAGAGAGAGCGCGCCACTTTAGCA
CGCGCCAGCAACGCTGCTGCTGCGCCTAGAGGAGTGAGAGTCGGAGTCAG
AGTGGTCATTCCGTTTTCTGTGTAATGGACACACACGTT

Coding sequence (CDS) from alignment at Contig_174:106348..114686-

>mRNA_16388 ID=mRNA_16388|Name=jgi.p|Trimin1|353630|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=522bp|location=Sequence derived from alignment at Contig_174:106348..114686- (Tribonema minus UTEX_B_3156 )
ATGCCTAGGGCCCCAGACAGCGTCAACGCGGCGGACTTGCAGCAGCGCAT
CTTGGATCTGCGGACGCGGGAGGCGCGGCGCTCTAAGGAACGCACTGCGG
AACAGTCTGCAGAGGACGCCGTGATGAGCGAACAAAAGTCCGCGGAGGAT
GCCATGATGAGCGAACAAAAGGCTCTGATGAAGCGGATGCGCAGTGCGTT
TGTCCTCATCTTCAACCCCGGGCAGGCCAGCGAAGGCATCTACACCCTCT
GGGTCAACAACCAGAACATTGTTCTCGGCTTCGAATCCAGGCAGGAGGCG
GTGAGGTACGCGCTGATGCTGAAGGCGCAGGAGTTCCACAGCCCATCGCC
GCAGGAGCTGAAGCTAGCTGAACTGAAGCAGTTCTGCAGAGAGTCTGGAG
TGGGCCTCAAGCTGGTGCCCAAGGGCTCAGGGCTCACACCGCCGGAGGCA
AACAAGACGGACGTGGACTCGCTGCGTCAGCGCTTCAACCAGCTGTACTC
CAGCCCCGATGACGCATGGTGA