Trimin1|353620|estExt_Genemark1.C_Ctg_1730022 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353620
Unique NameTrimin1|353620|estExt_Genemark1.C_Ctg_1730022
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length321
Homology
BLAST of jgi.p|Trimin1|353620 vs. uniprot
Match: A0A835Z6R4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6R4_9STRA)

HSP 1 Score: 593 bits (1528), Expect = 2.760e-213
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0
Query:    1 MKLSPRLETADASARRAGMSTATAAVIRHVPMAKAFSPRTIYMVRESLASTTAKGATEYHAAVVEAQLQETPVMQGALTGAGGGDSGGRASYTVTMECPVEELFEGDSKGFEGAIHLHDATGQLYMLALCEGNHCAQKQKGREKGNGVLVVTKKVVKDDGTCSWQTIRHMKVPSSAMFQDYSGINIQQGTGRVLISSXXXXXXXXXXXXXXXXXXXXXESQLWVGRMSLCSDGRFDPMKSELEGGVVFDFPRNDACEIIYCNLEASFVGVTWVTDHLIVAVSDRMKGGGAQPSRCQAKDQSIHVFALPESWEKSLQATLP 320
            MKLSPRLETADASARRAGMSTATAAVIRHVPMAKAFSPRTIYMVRESLASTTAKGATEYHAAVVEAQLQETPVMQGALTGAGGGDSGGRASYTVTMECPVEELFEGDSKGFEGAIHLHDATGQLYMLALCEGNHCAQKQKGREKGNGVLVVTKKVVKDDGTCSWQTIRHMKVPSSAMFQDYSGINIQQGTGRVLISSXXXXXXXXXXXXXXXXXXXXXESQLWVGRMSLCSDGRFDPMKSELEGGVVFDFPRNDACEIIYCNLEASFVGVTWVTDHLIVAVSDRMKGGGAQPSRCQAKDQSIHVFALPESWEKSLQATLP
Sbjct:    1 MKLSPRLETADASARRAGMSTATAAVIRHVPMAKAFSPRTIYMVRESLASTTAKGATEYHAAVVEAQLQETPVMQGALTGAGGGDSGGRASYTVTMECPVEELFEGDSKGFEGAIHLHDATGQLYMLALCEGNHCAQKQKGREKGNGVLVVTKKVVKDDGTCSWQTIRHMKVPSSAMFQDYSGINIQQGTGRVLISSXXXXXXXXXXXXXXXXXXXXXESQLWVGRMSLCSDGRFDPMKSELEGGVVFDFPRNDACEIIYCNLEASFVGVTWVTDHLIVAVSDRMKGGGAQPSRCQAKDQSIHVFALPESWEKSLQATLP 320          
BLAST of jgi.p|Trimin1|353620 vs. uniprot
Match: A0A812YL60_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YL60_SYMMI)

HSP 1 Score: 200 bits (508), Expect = 5.020e-59
Identity = 102/226 (45.13%), Postives = 139/226 (61.50%), Query Frame = 0
Query:   92 YTVTMECPVEELFEGDSKGFEGAIHLHDATGQLYMLALCEGNHCAQKQKGREKGNGVLVVTKKVVKDDGT---------CSWQTIRHMKVPSSAMFQDYSGINIQQGTGRVLISSXXXXXXXXXXXXXXXXXXXXXESQLWVGRMSLCSDGRFDPMKSELEGGVVFDFPRNDACEIIYCNLEASFVGVTWVTDHLIVAVSDRMKGGGAQPSRCQAKDQSIHVFALP 308
            Y V   CP E  F G SKGFEGA+ L DA G+LYML LCEGN C + ++GR KG+G +V+ + V   DGT         C W+TIR++K+P++A FQDYS I I +  GRV ++S                     ES++W+G+++   +G FDP+KSE     V +FPR+  CE++YCN+E    G+ WV+D L+V VSD+MK  G QP RC  KDQSIH+F +P
Sbjct:   86 YEVLRSCPSEMEFSGSSKGFEGAVGLKDAKGELYMLGLCEGNFCDEGKRGRVKGHGEVVLMQFV---DGTKDNVGAHHGCMWKTIRYLKIPATAHFQDYSAITINRN-GRVAVASQE-------------------ESKVWLGQLTHVDNGVFDPVKSEFVDEKVLNFPRDSNCEVVYCNIE----GIHWVSDELLVGVSDKMKSNGKQPFRCLEKDQSIHMFVMP 284          
BLAST of jgi.p|Trimin1|353620 vs. uniprot
Match: A0A7S4C0T9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0T9_CHRCT)

HSP 1 Score: 195 bits (496), Expect = 2.030e-55
Identity = 99/227 (43.61%), Postives = 138/227 (60.79%), Query Frame = 0
Query:   89 RASYTVTMECPVEELFEGDSKGFEGAIHLHDATGQLYMLALCEGNHCAQKQKGREKGNG-VLVVTKKVVKDDGTCSWQTIRHMKVPSSAMFQDYSGINIQQGTGRVLISSXXXXXXXXXXXXXXXXXXXXXESQLWVGRMSLCSDGRFDPMKSELEGGVVFDFPRNDACEIIYCNLEASFVGVTWVTD------HLIVAVSDRMKGGGAQPSRCQAKDQSIHVFALP 308
            R +YTV   CP E  FEG SKGFEGAI L    G+LY+L LCEGNHC +++KG++ GNG V+V+T+K   ++  C W T+  +++PSSA F DYS I +   T  V I+S                      SQ+W+G++   ++G FDP K++L G  V+DFPRN  C++ YCN+E    GV W++D       ++ AVSD+MK  G Q   C+ KDQSIH+FA+P
Sbjct:  240 RLNYTVIETCPSEMTFEGTSKGFEGAISLRGKDGRLYILGLCEGNHCKEEEKGKDAGNGRVVVMTRKQATNEFGCVWATVATLEIPSSANFVDYSAITLHSVTQAVAITSQE-------------------NSQVWIGKLEGGANGLFDPEKAKLTGDSVYDFPRNVNCDLQYCNIE----GVEWISDGGEGTPQVLAAVSDKMKSKGKQKFTCKEKDQSIHLFAIP 443          
BLAST of jgi.p|Trimin1|353620 vs. uniprot
Match: A0A7S4DAL8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAL8_HETAK)

HSP 1 Score: 194 bits (492), Expect = 2.330e-55
Identity = 109/278 (39.21%), Postives = 153/278 (55.04%), Query Frame = 0
Query:   41 IYMVRESLASTTAKGAT----------EYHAAVVEAQLQETPVMQGALTGAGGGDSGGRASYTVTMECPVEELFEGDSKGFEGAIHLHDATGQLYMLALCEGNHCAQKQKGREKGNGVLVVTKKVVKDDGTCSWQTIRHMKVPSSAMFQDYSGINIQQGTGRVLISSXXXXXXXXXXXXXXXXXXXXXESQLWVGRMSLCSDGRFDPMKSELEGGVVFDFPRNDACEIIYCNLEASFVGVTWVTDHLIVAVSDRMKGGGAQPSRCQAKDQSIHVFALP 308
            +Y+VRES+ ++    ++          EYHA V +  L  T    G               Y+V   CP    FEGDSKG EGA  +    G  Y+L LCEGN+CA+  KG+++GNG ++V KK    +G CSW T+R M++P SA FQDYS I+I   +GR+ I+S                     ESQ+W+G  +      FDP+ +E   G V++FPR+D CE++YCN+E    G+ W+ D+++VA SD+MK   +Q  RC  KDQSIHVF LP
Sbjct:  158 LYVVRESIDTSGGTDSSDSGDSDSADREYHAVVEKVFLNATDPNVG---------------YSVQESCPTVYQFEGDSKGLEGATMVRGVDGAEYILGLCEGNYCAEGDKGKDRGNGRVIVLKKT---EGACSWDTVRLMEIPKSADFQDYSAISISW-SGRIAITSQE-------------------ESQVWIGEFTSFDSLLFDPVNTEFGEGKVYNFPRDDNCEVVYCNIE----GIHWINDNMLVAASDKMKKS-SQDWRCFDKDQSIHVFVLP 392          
BLAST of jgi.p|Trimin1|353620 vs. uniprot
Match: B7FPJ1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPJ1_PHATC)

HSP 1 Score: 192 bits (489), Expect = 1.220e-54
Identity = 111/275 (40.36%), Postives = 150/275 (54.55%), Query Frame = 0
Query:   42 YMVRESLASTTAKGATEYHAAVVEAQLQETPVMQGALTGAGGGDSGGRASYTVTMECPVEELFEGDSKGFEGAIHLHDATGQLYMLALCEGNHCAQKQKGREKGNGVLVVTKKVVKDDGTCSWQTIRHMKVPSSAMFQDYSGINIQQGTGRVLISSXXXXXXXXXXXXXXXXXXXXXESQLWVGRMSLCSDG--------RFDPMKSELEGGVVFDFPRNDACEIIYCNLEASFVGVTWVTDHLIVAVSDRMKGGGAQPSRCQAKDQSIHVFALP 308
            Y+VRES+ ST       YHA + E  L                   G  +Y V  +CP E  FEGDSKGFEGAI +HD  G L +L LCEGN+C++ +K  +KG+G++V  +K V DDG+C W+T+  + +P +A F DYS + + +  G+V ISS                     ESQLWVG++   +D          FDP   +     +FDFP+ND C  +YCN+E    GV W+ D +I+AVSD+MK  G Q  RC  KDQS+HVF LP
Sbjct:  196 YVVRESIQSTD----KTYHAIIEELSL-------------------GEEAYEVVEQCPAEFEFEGDSKGFEGAIAVHDLNGTLTVLGLCEGNYCSESKKD-DKGHGMVVAMQKGVSDDGSCEWKTVTTISIPKTAFFADYSAMTMDK-KGKVAISSQE-------------------ESQLWVGKLLGQNDAGLWDILNIAFDPDHKDK----LFDFPKNDQCATVYCNIE----GVHWIGDDMILAVSDKMKSKGKQDFRCFDKDQSVHVFVLP 418          
BLAST of jgi.p|Trimin1|353620 vs. uniprot
Match: A0A7S0L7J8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L7J8_9EUKA)

HSP 1 Score: 184 bits (467), Expect = 1.330e-51
Identity = 99/228 (43.42%), Postives = 132/228 (57.89%), Query Frame = 0
Query:   90 ASYTVTMECPVEELFEGDSKGFEGAIHLHDATGQLYMLALCEGNHCAQKQKGREKGNGVLVVTKKVVKDDGTCSWQTIRHMKVPSSAMFQDYSGINIQQGTGRVLISSXXXXXXXXXXXXXXXXXXXXXESQLWVGRMSLCSDGRFDPMKSELEGGVVFDFPRNDA-CEIIYCNLEASFVGVTWVTDH--------LIVAVSDRMKGGGAQPSRCQAKDQSIHVFALP 308
            +SYTV   C  E  FEGDSKGFEG   L    G LY+L LCEGNHC++K  G++ G+G +VV  +    DG C W+T+R + +PSS  F DYS I I   T  V ++S                      SQLWVG+++  +DG FDP+ +E   G V+DFPR+D+ CE  YCN+E    G+ W++           +VAVSD+MK  G QP+ C  KDQSIH+F+LP
Sbjct:  195 SSYTVVETCLSEMTFEGDSKGFEGGTSLRGKDGVLYVLGLCEGNHCSEKN-GKDVGHGKVVVMAREETPDG-CRWKTVRQLNLPSSVRFVDYSAIAIHHSTQSVAVTSQE-------------------NSQLWVGQLAGGADGAFDPLAAEFSEGKVYDFPRSDSSCEATYCNIE----GIHWISGSGEGGTMPSTLVAVSDKMKSKGRQPAICHDKDQSIHLFSLP 397          
BLAST of jgi.p|Trimin1|353620 vs. uniprot
Match: A0A8J2STX4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2STX4_9STRA)

HSP 1 Score: 174 bits (440), Expect = 6.530e-47
Identity = 97/230 (42.17%), Postives = 125/230 (54.35%), Query Frame = 0
Query:   92 YTVTMECPVEELFEGDSKGFEGAIHLHDATGQLYMLALCEGNHCAQKQKGREKGNGVLVVTKKVVKDD-----GTCSWQTIRHMKVPSSAMFQDYSGINIQQGTGRVLISSXXXXXXXXXXXXXXXXXXXXXESQLWVGRMSLCSDGRFDPMKSELEGGVVFDFPRNDACEIIYCNLEASFVGVTWVTD--------HLIVAVSDRMKGGGAQPSRCQAKDQSIHVFALP 308
            Y V   CP E LF+GDSKGFEGA  +  A G LY+L LCEGNHC+  Q G++ G+G ++V   + ++D     G C W+T+R + +P    F DYS + I   T  V I+S                      SQ+WVG +S  SDG FDPM +E   G V+DFPR   C + YCN+E    G+ WV D          +V VSD+MKG G QP  C  KDQS H+F LP
Sbjct:  274 YAVLDSCPSEMLFDGDSKGFEGARSIRGADGVLYVLGLCEGNHCSS-QTGKDVGHGKVIV---MAREDEGGPTGGCYWKTVRTIDLPMKE-FVDYSALAIHHRTKAVAITSQE-------------------NSQVWVGELSTGSDGEFDPMTAEFSKGKVYDFPRAATCAVQYCNIE----GIEWVDDGGADEDAPRTLVGVSDKMKGKGKQPFTCLEKDQSFHLFQLP 475          
BLAST of jgi.p|Trimin1|353620 vs. uniprot
Match: A0A7S1XJ02_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ02_9STRA)

HSP 1 Score: 169 bits (427), Expect = 5.850e-46
Identity = 93/221 (42.08%), Postives = 126/221 (57.01%), Query Frame = 0
Query:   92 YTVTMECPVEELFEGDSKGFEGAIHLHDATGQLYMLALCEGNHCAQKQKGREKGNGVLVVTKKVVKDDGTCSWQTIRHMKVPSSAMFQDYSGINIQQGTGRVLISSXXXXXXXXXXXXXXXXXXXXXESQLWVGRMSLCSDGRF--DPMKSELEGGVVFDFPRN-DACEIIYCNLEASFVGVTWV-TDHLIVAVSDRMKGGGAQPSRCQAKDQSIHVFALP 308
            Y +   C V+  FEGDSKGFEGAI L D  G+L+ + LCEGN CA+   G++KG+G +V+  K    DG C W T + + +P SA FQDYS I ++   G V ISS                      +Q+WVG+  L  DG F  D  + + + G V+DFPR+ D C + YCN+E    G+ +   D L++AVSD+MK  G Q  +C  KDQS HVF+LP
Sbjct:  176 YEIEDACRVDFEFEGDSKGFEGAIGLKDKDGKLFFIGLCEGNGCAEGDAGKDKGHGKIVIASKGTDGDGKCLWTTEKTLPIPRSAYFQDYSAIAMR-ADGTVAISSQE-------------------NAQVWVGKFKLADDGFFALDVAEFDDDVGEVYDFPRSVDGCSVEYCNVE----GIHFTDNDRLLLAVSDKMKSRGKQNYKCLGKDQSAHVFSLP 372          
BLAST of jgi.p|Trimin1|353620 vs. uniprot
Match: A0A7S2Q461_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q461_9STRA)

HSP 1 Score: 169 bits (429), Expect = 8.310e-46
Identity = 99/253 (39.13%), Postives = 134/253 (52.96%), Query Frame = 0
Query:   58 EYHAAVVEAQLQETPVMQGALTGAGGGDSGGRASYTVTMECPVEELFEGDSKGFEGAIHLHDATGQLYMLALCEGNHCAQKQKGREKGNGVLVVTKKVVKDDGT-CSWQTIRHMKVPSSAMFQDYSGINIQQGTGRVLISSXXXXXXXXXXXXXXXXXXXXXESQLWVGRMSLCSDGRFDPMKSELE-GGVVFDFPRNDACEIIYCNLEASFVGVTWVTDHLIVAVSDRMKGGGAQPSRCQAKDQSIHVFALP 308
            EYHA + E +L E                     YTV  EC  E  FEGDSKGFEGA+   D  G LY++ LCEGNHC++ +K  + GNG +V+ KK    + T C W+T+R + +PSSA F DYS I+I Q  GRV I+S                      S +W+G+     +G  DP+  + E    V  FP++  C  IYCN+E    G+ ++ D +++AVSD+MK  G Q  RC  KDQSIH F +P
Sbjct:  210 EYHAIIEELELSEN-------------------DYTVVNECRCEFEFEGDSKGFEGAVGFPDEDGVLYIVGLCEGNHCSESRKN-DVGNGRVVLMKKSEDPEMTQCVWETVRVVNIPSSAAFLDYSAIDITQD-GRVAITSQE-------------------HSAVWLGQAKGIDNGIIDPIGFDFEVKSKVLQFPKDGGCHTIYCNIE----GIHFMNDDMLMAVSDKMKSKGRQDFRCHDKDQSIHAFVIP 418          
BLAST of jgi.p|Trimin1|353620 vs. uniprot
Match: A0A7S3L566_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L566_9STRA)

HSP 1 Score: 165 bits (417), Expect = 5.310e-45
Identity = 100/272 (36.76%), Postives = 143/272 (52.57%), Query Frame = 0
Query:   40 TIYMVRESLASTTAKGATEYHAAVVEAQLQETPVMQGALTGAGGGDSGGRASYTVTMECPVEELFEGDSKGFEGAIHLHDATGQLYMLALCEGNHCAQKQKGREKGNGVLVVTKKVVKDDGTCSWQTIRHMKVPSSAMFQDYSGINIQQGTGRVLISSXXXXXXXXXXXXXXXXXXXXXESQLWVGRMSLCSDGRFDPMKSEL---EGGVVFDFPRNDACEIIYCNLEASFVGVTWVTDHLIVAVSDRMKGGGAQPSRCQAKDQSIHVFALP 308
            T Y+VRES+     +    YHA + E  L     +                 +T+  +C  E  FEGDSKGFEG   +HD  G+ Y+LALCEGN C +K+    +GNG +VV K + + D +C W T++ ++VP  A F DYS + I++  G V I+S                     +S LW+GR+   +        SEL   + G +F FP+N+ CE IYCN+E    G+ W+ D  ++AVSD+  G G +  RC +KDQS+HVFALP
Sbjct:   95 TYYIVRESVLHDELQS---YHAIIEEIDLHRHRDVS--------------EQFTINRKCRTEFQFEGDSKGFEGVWAIHDIEGEFYLLALCEGNRCREKEH-TSRGNGRIVVMK-LNETDTSCVWNTVKILEVPHDAYFADYSAMAIRED-GYVAITSQE-------------------DSMLWIGRLFGKNPETGHWNVSELAFDQVGEMFSFPKNENCETIYCNIE----GIHWLDDGTLIAVSDKTHGEGDEDFRCYSKDQSVHVFALP 323          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353620 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6R4_9STRA2.760e-213100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A812YL60_SYMMI5.020e-5945.13Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A7S4C0T9_CHRCT2.030e-5543.61Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4DAL8_HETAK2.330e-5539.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B7FPJ1_PHATC1.220e-5440.36Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S0L7J8_9EUKA1.330e-5143.42Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A8J2STX4_9STRA6.530e-4742.17Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1XJ02_9STRA5.850e-4642.08Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2Q461_9STRA8.310e-4639.13Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3L566_9STRA5.310e-4536.76Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_173contigContig_173:169652..175745 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353620mRNA_15885Tribonema minus UTEX_B_3156 mRNAContig_173 169652..176361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353620|estExt_Genemark1.C_Ctg_1730022 ID=Trimin1|353620|estExt_Genemark1.C_Ctg_1730022|Name=jgi.p|Trimin1|353620|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=321bp
MKLSPRLETADASARRAGMSTATAAVIRHVPMAKAFSPRTIYMVRESLAS
TTAKGATEYHAAVVEAQLQETPVMQGALTGAGGGDSGGRASYTVTMECPV
EELFEGDSKGFEGAIHLHDATGQLYMLALCEGNHCAQKQKGREKGNGVLV
VTKKVVKDDGTCSWQTIRHMKVPSSAMFQDYSGINIQQGTGRVLISSQDY
SGINIQQGTGRVLISSQEESQLWVGRMSLCSDGRFDPMKSELEGGVVFDF
PRNDACEIIYCNLEASFVGVTWVTDHLIVAVSDRMKGGGAQPSRCQAKDQ
SIHVFALPESWEKSLQATLP*
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