Trimin1|353616|estExt_Genemark1.C_Ctg_1730014 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353616
Unique NameTrimin1|353616|estExt_Genemark1.C_Ctg_1730014
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length762
Homology
BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A836CJN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN0_9STRA)

HSP 1 Score: 1008 bits (2606), Expect = 0.000e+0
Identity = 761/761 (100.00%), Postives = 761/761 (100.00%), Query Frame = 0
Query:    1 MLVGGPFAIGAPSGALAPHKPASQQXXXXXXXXXXXXXXXLAHPLPDQQPSARKHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPLLGHLLPAAAAAVDRGAVPDEPWQRRHRQPHSPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAPANTSRCEERDPPAPRLASLLPAAAIADAIVHXXXXXXXXXXXXXXRWQPVLTPHQRLQXXXXVEEWGQQRXXXXXXADSDEQPGRKRSRTDAEPAHRNGGSSARRDGGAAVRPALPLTMSGNANGASAAQQQDGKRKGKFSAEESARVEASIRDYCALHNVSVERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGESRAHTDLRLVEELLETGAEDESEITWAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALSSSSGGGAPALHLACRAIGRKAVSKRRGDAHKHTKARTSTQFIITAPDMNLALYLSHPIASTRWIRLRSRIPGSAAMSFVAALRECRAGLLDAVHAIDNGERPRAKGKRHKTPQQRVVGSLPGGVSDXXXXXXXXXXYYGDE 761
            MLVGGPFAIGAPSGALAPHKPASQQXXXXXXXXXXXXXXXLAHPLPDQQPSARKHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPLLGHLLPAAAAAVDRGAVPDEPWQRRHRQPHSPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAPANTSRCEERDPPAPRLASLLPAAAIADAIVHXXXXXXXXXXXXXXRWQPVLTPHQRLQXXXXVEEWGQQRXXXXXXADSDEQPGRKRSRTDAEPAHRNGGSSARRDGGAAVRPALPLTMSGNANGASAAQQQDGKRKGKFSAEESARVEASIRDYCALHNVSVERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGESRAHTDLRLVEELLETGAEDESEITWAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALSSSSGGGAPALHLACRAIGRKAVSKRRGDAHKHTKARTSTQFIITAPDMNLALYLSHPIASTRWIRLRSRIPGSAAMSFVAALRECRAGLLDAVHAIDNGERPRAKGKRHKTPQQRVVGSLPGGVSDXXXXXXXXXXYYGDE
Sbjct:    1 MLVGGPFAIGAPSGALAPHKPASQQXXXXXXXXXXXXXXXLAHPLPDQQPSARKHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPLLGHLLPAAAAAVDRGAVPDEPWQRRHRQPHSPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAPANTSRCEERDPPAPRLASLLPAAAIADAIVHXXXXXXXXXXXXXXRWQPVLTPHQRLQXXXXVEEWGQQRXXXXXXADSDEQPGRKRSRTDAEPAHRNGGSSARRDGGAAVRPALPLTMSGNANGASAAQQQDGKRKGKFSAEESARVEASIRDYCALHNVSVERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGESRAHTDLRLVEELLETGAEDESEITWAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALSSSSGGGAPALHLACRAIGRKAVSKRRGDAHKHTKARTSTQFIITAPDMNLALYLSHPIASTRWIRLRSRIPGSAAMSFVAALRECRAGLLDAVHAIDNGERPRAKGKRHKTPQQRVVGSLPGGVSDXXXXXXXXXXYYGDE 761          
BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A6T7HTI9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HTI9_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.880e-27
Identity = 78/230 (33.91%), Postives = 108/230 (46.96%), Query Frame = 0
Query:  323 GKFSAEESARVEASIRDYCALHNVSVERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLP------KTEIPWDFISAQHGTRSRVMCLKKMENIM 546
            GKFS EES  V   I +YC    +S  RLC +  HK E++GAW  I+  LP RTVQ+                                               G +      RGPWSD+E+Q L QLV   G KW  I+  +GR +++CRDKYRE+N E +  G W   E E L  L+ +  KV P+T ++++       +  +PW  IS Q G RSR+ C KK + ++
Sbjct:   71 GKFSPEESEIVRRGIEEYCERKGISTARLCSECDHKSELKGAWMEISRNLPLRTVQSVYRH-------------------------------------------GLRQLHPFSRGPWSDEEVQTLLQLVTRMGKKWSTIQQTLGRTADSCRDKYREINSE-YIKGRWKENETELLLRLIREQLKVDPNTEVAEMANMVESQQIVLPWSTISKQIGKRSRLSCFKKWQKLI 256          
BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A7S4JZX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JZX3_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.120e-25
Identity = 68/232 (29.31%), Postives = 108/232 (46.55%), Query Frame = 0
Query:  320 KRKGKFSAEESARVEASIRDYCALHNVSVERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTE------IPWDFISAQHGTRSRVMCLKKMENI 545
            +  GKF+  E+A V  +I +YCA  N++  RLC +  HK E++GAW  IA  LP RTVQ+                                               G +      RGPWS++E++ L  +V  +G KW  I++ + R +++CRDK+RE++ + +  G W   E E L  L+ +  +  P+  + +L K        +PW  IS + G RSR+ C KK + +
Sbjct:   19 RNNGKFTPAETAVVRRAIEEYCAAKNITTSRLCSECDHKAELKGAWMEIARRLPHRTVQSVYRH-------------------------------------------GLRQLHPFKRGPWSEEEVKLLLDMVNRYGKKWSAIQSKLHRSADSCRDKHREMSSD-YVKGRWKEGETELLKRLIREHLRTNPNADIVELGKRVEAEDIVLPWSSISKRMGKRSRLSCFKKWQKM 206          
BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A6H5K2Z7_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z7_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.540e-24
Identity = 81/273 (29.67%), Postives = 126/273 (46.15%), Query Frame = 0
Query:  319 GKRKGKFSAEESARVEASIRDYCALHNVSVERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPD---TRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGES--RAHTDLRLVEELLETGAEDESEITWA 586
            G + GK+S  ES  V  +I+ Y + + ++VE LCQDG      + AW  IA  LP+R+VQ+                                               G +       GPW+D+E+ QL+ LV  HG KW  I   +GR ++ACRDK REL P   + G W   EE+ L++L+ D  + + D     L+     ++PW  ++    +R+R+ C KK + +     Q+    R  S   A  +L  V+ +++TGA DESE+ W+
Sbjct:   93 GMKGGKYSNTESKIVVDAIKSYASANAITVESLCQDGSRSVGSKRAWLSIANCLPDRSVQSIYRH-------------------------------------------GIRQLHGMKMGPWTDEEVAQLKLLVSTHGNKWSEIGKKVGRSADACRDKSRELIPTP-QEGPWTEQEEKLLNKLIMDRMECSEDMSEVMLTGDEDVDVPWAEVARIIKSRNRIACRKKWDYLQMQRRQKRQYVRDTSGSAASVNLAFVKAIIDTGAADESELNWS 321          
BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A1Y1IKR6_KLENI (Uncharacterized protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IKR6_KLENI)

HSP 1 Score: 85.5 bits (210), Expect = 9.390e-14
Identity = 68/277 (24.55%), Postives = 114/277 (41.16%), Query Frame = 0
Query:  323 GKFSAEESARVEASIRDYCALHNVS---VERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFF----------KVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGESRAHTDLRLVEELLETGAEDESEITWA 586
            G FS EE   + A++ +Y    N+    +E+L     HK E++GAW  IA  LPER+V+                                                         +G WS +E ++L+ L    GPKW  I + +GR+ +AC+DK+R +   + + G W   E E+L  L+ +            +V    ++ D    +I W  ISA+ G R+   CL+   ++++    R      E     D  +++ ++E+GA  E E+ WA
Sbjct:  204 GAFSKEEDEIIRAAVAEYIEERNLGEDGIEKLLNTRKHK-EVQGAWLEIARCLPERSVKRVHARACRLLHGGNY------------------------------------------KGRWSREEEERLQTLHAQLGPKWVQIGSMMGRLPDACKDKWRIIGVTDKKKGQWSPKESEQLSRLVQESLSQKRIRTSVERVVDGRQVRD----DIDWTAISARMGVRTANQCLRHWYDVLAPGMVRTGTGVEEWGGEDDQLMLQRIVESGATSEPEVEWA 433          
BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A3P3YA00_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YA00_PLABS)

HSP 1 Score: 74.7 bits (182), Expect = 2.340e-10
Identity = 60/201 (29.85%), Postives = 84/201 (41.79%), Query Frame = 0
Query:  321 RKGKFSAEESARVEASIRDYCALHNVS---VERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPK 518
            +KG+F+  E   +  ++ DY   H++    ++ LC     + E+RGAW IIA+ LP R+V +                                                 +  AD   G W+DD+I  LRQLV  HG KW LI + I R+  +CRDKYR L   E R   W   EEE    LL    +   DT   +LP+
Sbjct:  123 QKGRFTPGEKEILRKAVLDYVREHDLGDAGIQMLCAKK-RRPELRGAWSIIAQCLPHRSVSSCYHFCT-------------------------------------------RAFADRSTGKWTDDDIALLRQLVAKHGRKWTLIGSMIERLPCSCRDKYRLL---EKRGSKWTLDEEE----LLVQHMRAYGDTVPLELPR 272          
BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A7R9ADU9_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9ADU9_9CRUS)

HSP 1 Score: 72.8 bits (177), Expect = 1.960e-9
Identity = 47/150 (31.33%), Postives = 79/150 (52.67%), Query Frame = 0
Query:  437 GPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGESRAHTD-LRLVEELLETGAEDESEITW 585
            GP+S +E++ L+QLV +HG  W+LI   +GR  E+ +D+YR L  ++ R G W+  EE++L     D           ++  + I W  ++   GTRS   C  K  + +   + +E++  G    H D L LVE++    A++E +I W
Sbjct:  304 GPYSQEEVEALKQLVSIHGKNWKLIGAALGRSGESIKDRYR-LVRDDCRNGKWNEEEEQKLS----DAVHQVCGQESGEMAVSGINWTEVAQIVGTRSEKQCRNKWLHCL---YWKESK--GSVWTHKDDLILVEKIGALNAKEEGDIDW 443          
BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: UPI0018849292 (cyclin-D-binding Myb-like transcription factor 1 isoform X1 n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018849292)

HSP 1 Score: 71.2 bits (173), Expect = 4.810e-9
Identity = 46/156 (29.49%), Postives = 79/156 (50.64%), Query Frame = 0
Query:  437 GPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMS------AEFQREARARGESRAHTDLRLVEELLETGAEDESEITWA 586
            G ++DDE++QLR L  +HG KW+ I   +GR + + +D+ R L  +    G W + EEERL + ++D  +  P  +++    + I W  ++ +  TRS   C  K  N +S       E+ RE           D  L++ L ++G  +E +I W+
Sbjct:  296 GRYTDDEVEQLRNLRAIHGNKWQTIGALMGRSAASVKDRVRVLR-DNCNQGKWLKEEEERLEQAVYDLTQTLPGQQVT----SGINWAAVAQKVITRSEKQCRSKWLNNLSWKTTGGEEWTRE----------DDKHLIDVLSDSGLAEEGDIDWS 436          
BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: K0TH64_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TH64_THAOC)

HSP 1 Score: 68.9 bits (167), Expect = 1.470e-8
Identity = 45/160 (28.12%), Postives = 68/160 (42.50%), Query Frame = 0
Query:  325 FSAEESARVEASIRDYCALHNVSVERLCQDGG-----HKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYREL 479
            +S +E   ++ ++ DYC  ++V+V +LC  GG     H   IRGAW +IA+ LP RTV +                                                        RG WS+DEI+ L +LV +HG KW+ I+  +GR +  CR K+ +L
Sbjct:   35 YSEDEVRTLQLAVHDYCESNDVTVSQLC--GGADHTVHNKRIRGAWQVIAQCLPHRTVLSVYRKALRRFHTHT-------------------------------------------RGKWSEDEIRSLLRLVELHGHKWKSIQDKLGRSATDCRLKFFDL 149          
BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: UPI001C920106 (cyclin-D-binding Myb-like transcription factor 1 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C920106)

HSP 1 Score: 66.6 bits (161), Expect = 1.290e-7
Identity = 42/149 (28.19%), Postives = 74/149 (49.66%), Query Frame = 0
Query:  437 GPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGESRAHTDLRLVEELLETGAEDESEITW 585
            G +++DE++QLR L  +HG +W  I   +GR + + +D+ R L  +    G W + EEERL + ++D  +  P   ++    + I W  ++ Q  TR+   C  K  N ++ +         E     D RL++ L E    +ES++ W
Sbjct:  273 GRYTEDEVEQLRNLRAIHGNRWGTIGALMGRSAASVKDRVRVLR-DNCNQGKWLKEEEERLEQAVYDLTETLPGQPVT----SGINWAAVAQQVITRTEKQCRSKWLNNLNWKTM----GGDEWTRDDDYRLIDVLYELQLSEESDVDW 412          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353616 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A836CJN0_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6T7HTI9_9STRA2.880e-2733.91Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S4JZX3_9STRA2.120e-2529.31Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A6H5K2Z7_9PHAE1.540e-2429.67MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A1Y1IKR6_KLENI9.390e-1424.55Uncharacterized protein (Fragment) n=1 Tax=Klebsor... [more]
A0A3P3YA00_PLABS2.340e-1029.85Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]
A0A7R9ADU9_9CRUS1.960e-931.33Hypothetical protein n=1 Tax=Darwinula stevensoni ... [more]
UPI00188492924.810e-929.49cyclin-D-binding Myb-like transcription factor 1 i... [more]
K0TH64_THAOC1.470e-828.13Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
UPI001C9201061.290e-728.19cyclin-D-binding Myb-like transcription factor 1 n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..72
NoneNo IPR availableGENE3D1.10.10.60coord: 433..481
e-value: 2.3E-9
score: 38.8
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 439..497
e-value: 3.2E-11
score: 43.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 720..761
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 746..761
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..327
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..444
NoneNo IPR availablePANTHERPTHR46380CYCLIN-D-BINDING MYB-LIKE TRANSCRIPTION FACTOR 1coord: 436..695
coord: 24..379
IPR001005SANT/Myb domainSMARTSM00717santcoord: 485..548
e-value: 5.4
score: 11.5
coord: 435..482
e-value: 9.8E-10
score: 48.3
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 431..480
score: 8.292662
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 438..479
e-value: 7.79443E-8
score: 47.185
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 436..484
score: 14.529616
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 436..497

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_173contigContig_173:107910..115539 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353616mRNA_15876Tribonema minus UTEX_B_3156 mRNAContig_173 107891..115539 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353616|estExt_Genemark1.C_Ctg_1730014 ID=Trimin1|353616|estExt_Genemark1.C_Ctg_1730014|Name=jgi.p|Trimin1|353616|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=762bp
MLVGGPFAIGAPSGALAPHKPASQQQPQQQQRQQQLPQQQLAHPLPDQQP
SARKHKKKKKKRRQQEQEQQEQSPQQSQERHHQHQRPIQDQQQQPQAPLL
GHLLPAAAAAVDRGAVPDEPWQRRHRQPHSPQQRRQQQQRSPAAQQPKSR
QERRQQQRQQRRQLPATSSNDDSSDESAQEDEPAPANTSRCEERDPPAPR
LASLLPAAAIADAIVHRQQQRQQQQQQQQQRWQPVLTPHQRLQQQQQVEE
WGQQRQRQRQQADSDEQPGRKRSRTDAEPAHRNGGSSARRDGGAAVRPAL
PLTMSGNANGASAAQQQDGKRKGKFSAEESARVEASIRDYCALHNVSVER
LCQDGGHKGEIRGAWHIIAEALPERTVQARRRRRGGGRGGGGGGSGGGSS
GGGGGGGGGSGGGGGSSDGSSSGGDSGCKGSADPPRGPWSDDEIQQLRQL
VRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHEL
LWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEF
QREARARGESRAHTDLRLVEELLETGAEDESEITWAKSRAHTDSRSVEEL
LETGAEDESKITWAKALALSSSSGGGAPALHLACRAIGRKAVSKRRGDAH
KHTKARTSTQFIITAPDMNLALYLSHPIASTRWIRLRSRIPGSAAMSFVA
ALRECRAGLLDAVHAIDNGERPRAKGKRHKTPQQRVVGSLPGGVSDDDDD
SSDEDDYYGDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf