Trimin1|353594|estExt_Genemark1.C_Ctg_1720017 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353594
Unique NameTrimin1|353594|estExt_Genemark1.C_Ctg_1720017
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length538
Homology
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A835Z6T6_9STRA (Wheel domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T6_9STRA)

HSP 1 Score: 875 bits (2261), Expect = 0.000e+0
Identity = 537/537 (100.00%), Postives = 537/537 (100.00%), Query Frame = 0
Query:    1 MSPTYRTVALALHWMEAQRRTVALRRGSASDTRDRSAQRDATSAPPGPPRLHRVRWRDAPRLRVSCATHGGAHTGTARESRKARTGVTMRGIGAPPHEGNERFKRTRLNKMYFKHAALFYTEAIKHAVMAEQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAFRDEADCADEVKASCGASLTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRVRALRGLDTPEAAEKARAEVKQRARSADFDPNKARWLHVHPKCTVSQLLTHPEHVAAGGMVTLHVYARGSEAHAQFLRYNAPRIRELEP 537
            MSPTYRTVALALHWMEAQRRTVALRRGSASDTRDRSAQRDATSAPPGPPRLHRVRWRDAPRLRVSCATHGGAHTGTARESRKARTGVTMRGIGAPPHEGNERFKRTRLNKMYFKHAALFYTEAIKHAVMAEQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAFRDEADCADEVKASCGASLTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRVRALRGLDTPEAAEKARAEVKQRARSADFDPNKARWLHVHPKCTVSQLLTHPEHVAAGGMVTLHVYARGSEAHAQFLRYNAPRIRELEP
Sbjct:    1 MSPTYRTVALALHWMEAQRRTVALRRGSASDTRDRSAQRDATSAPPGPPRLHRVRWRDAPRLRVSCATHGGAHTGTARESRKARTGVTMRGIGAPPHEGNERFKRTRLNKMYFKHAALFYTEAIKHAVMAEQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAFRDEADCADEVKASCGASLTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRVRALRGLDTPEAAEKARAEVKQRARSADFDPNKARWLHVHPKCTVSQLLTHPEHVAAGGMVTLHVYARGSEAHAQFLRYNAPRIRELEP 537          
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: D7FKE3_ECTSI (Wheel domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKE3_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 3.500e-40
Identity = 123/440 (27.95%), Postives = 178/440 (40.45%), Query Frame = 0
Query:   99 GNERFKRTRLNKMYFKHAALFYTEAIKHAVMAEQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDAS-HAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAFRDEADCADEVKASCGASLTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRVRALRGLDTPEAAEKARAEVKQRARSADFDPNKARWLHVHPKCTVSQLLTHPEHVAAGGMVTLHVYARGSEAHAQFLRYNAPRIRELEP 537
            GN+RFKR + N MYF+HA   YTE +++  + E+T ++  +   +L+NRA ANL +KNYG            S R+ CDE+L L PG+                         VKC +RK                             L +++  C    + A +  AA               +    A GV LGPS FD S H    + L    D   D   ++WP+LLLYP  GQSD++++  + D +  HLA  FPE GPP PWD + +EYRCS L  Y  L          D   E +    A ++                                                  A E +R   ++ A +A       RW  VHP CT+ ++L+  +HV AG   TL ++ +  ++H  FLR +  RI  L+P
Sbjct:   88 GNDRFKRGKKNAMYFRHAQQAYTEGLRNVRLGEETPELTAMVVALLSNRAMANLALKNYG------------SCRKDCDEALALSPGH-------------------------VKCLYRKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKIKKECGRALKAAEDATAALNREKEERLERLAAVWDECEAAGVKLGPSGFDESNHEQRNAFLPMADDEHGDKGGVIWPVLLLYPQYGQSDLIQAFRDADMLAEHLAAAFPEEGPPAPWDTS-FEYRCSELVIYLPLRPVEPSPSVFDWVAEFEKMEAAKVSG-------------------------------------------------AEEMSRRSKERAAATAAAAARPQRWARVHPGCTLLRILSFEDHVVAGATPTLLLFPKDGQSHKDFLRDSGGRIFTLDP 440          
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A507C9A7_9FUNG (Wheel domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C9A7_9FUNG)

HSP 1 Score: 94.0 bits (232), Expect = 3.260e-17
Identity = 86/289 (29.76%), Postives = 124/289 (42.91%), Query Frame = 0
Query:   97 HEGNERFKRTRLNKMYFKHAALFYTEAIKHAVMAEQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPAS----KELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAY 381
            ++GNE FK  R     +K A +FY+  + H        D + L  T+L NRAAA++ + NY              V   C  +L+L P N                         VK ++R A+A   L++++EAVDCC  GLEIDP +    +EL  + T+   EA    E   A    ++A         +A   R +  G     A+  H           D  ++ L  P+L LYP   QSD + +  E DT G H+  VF +   PPPWDA   EY   +L+ Y
Sbjct:   74 NQGNEAFKERR-----YKDARVFYSRGLDHKC------DDIDLNTTLLVNRAAAHIELGNY------------RQVLLDCAAALKLSPKN-------------------------VKAFYRSARACTALERFEEAVDCCERGLEIDPTNDALKRELEVIETK-RGEAVKHQEAKRAQQLEIQAQDQALSDALKARNIRSIETGSGIHPAAEDHHILL-------DPATNTLSIPVLFLYPEYSQSDFIAAFNENDTFGEHIHTVFDD---PPPWDAKK-EYLPDKLDVY 302          
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A1V9YFH9_9STRA (Wheel domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFH9_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 8.420e-16
Identity = 98/320 (30.63%), Postives = 136/320 (42.50%), Query Frame = 0
Query:   97 HEGNERFKR-TRLNKMYFKHAALFYTEAIKHAVMA---------------EQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRT---RCAAEAR-----DA--AERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAF 390
            ++GN+ F    + NK Y+ +A   Y++A+ + + A               ++   M  L AT+L NRAAA+L +KNYG            S R     +L+  P N                         +K  +R AKA   LK+ ++ +  C  GL IDP +KEL  LR    R   E R     DA  A++A A     R  C          A RGV +G    D +      D     D D +   + WP+LLLY   GQSD ++S  ERD    HLA +FPE GP   WD   ++Y  S+L  YA      AF
Sbjct:   64 NKGNKMFADGKKFNKNYYSYALKEYSDALAYGLKALASPTPAEELAKMDIDEPIVMTTLMATILTNRAAAHLALKNYG------------SCRSDAARALKYDPKN-------------------------LKAIYRGAKASSLLKKPEDTLRYCAVGLAIDPNNKELLALRVDGDRILEEQRVQRELDAFKAKKAHAMTDKFRKLC----------ALRGVRVGRGVLDDARV---KDFEGKADLDEEGV-MCWPVLLLYDEYGQSDFIQSFGERDMFIEHLANMFPEEGPFCFWDQR-HDYVASQLVVYAAADVVPAF 331          
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A024GLS2_9STRA (Wheel domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GLS2_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 4.750e-14
Identity = 85/317 (26.81%), Postives = 142/317 (44.79%), Query Frame = 0
Query:   98 EGNERFKRTRLNKM-YFKHAALFYTEAIKHAVMA-----EQTA---DMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTEL---------RTRCAAEARDAA-ERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAFRDEAD 395
            +GNE F+  + + + Y++ A  +Y++AI + + A     EQ A   ++  L A + +NR+A +L +KNYG                 C     +  G                          +K YFR AKA + L++  + +  C+EGL+IDP+SK+L +L         + +   + +D   ++  +     R+ C           AR + +G S F+        +LAP    ++++++++WP+L LY     SD+V +  E DT   HLA +FPEGGP   WD     Y+ S L  Y R   +  F  E D
Sbjct:   64 KGNEMFQTAKKHNLNYYRDALQYYSKAIAYGLEALKSTPEQRAPSYNITALMAQIYSNRSAVHLALKNYGS----------------CRSDAAVAIGYDCKH---------------------IKSYFRGAKASQKLQKPHDTLRYCMEGLQIDPSSKQLQQLEKEARLLLQKIQSEMDQKDREHQQRRSQVARYRSWCV----------ARRIRVGRSLFEDQRVRQ-YELAP--HVENETNDMVWPVLFLYDEYQTSDLVEAFGEHDTFVEHLANMFPEGGPYCEWDIEE-SYQASNLLLYVRANESIPFHTEED 329          
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A1W0A4K1_9STRA (Wheel domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4K1_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.070e-13
Identity = 91/320 (28.44%), Postives = 133/320 (41.56%), Query Frame = 0
Query:   97 HEGNERFKRTRLNKMYFKHAALFYTEAIKHA-----------VMAEQTAD----MVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRT---RCAAEARDA-------AERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAFR 391
            ++GN+ F   + NK Y+ +A   YT+A  +            V+A+   D    M +L AT+L+NRAAA+L +KNYG            S R     +L+  P N                         +K  +R AKA   LK+ ++ +  C  GL IDP +KEL  LR    R   E R         A++  A     R  C            R + +G +  D +      D     D D +   + WP+L LY   GQSD ++  +E+D    HLA +FPE GP   WD    +Y  S+L+ Y       AF+
Sbjct:   64 NKGNKMFSDGKKNKNYYGYAIKEYTDAFTYGLKALAEPTDPDVLAKMDLDEPIVMDKLMATILSNRAAAHLSLKNYG------------SCRSDAARALKYDPKN-------------------------IKAIYRGAKASSLLKKPEDTLRYCSVGLTIDPTNKELLALRKDGDRILEEQRVQRELDEFKAKKKYAMTEKYRKLCTM----------RNIRVGRAVIDDARV---KDFEGKADLDEEGV-MGWPVLFLYDEYGQSDFIQCFSEQDMFIEHLANMFPEDGPFCFWDKR-QDYVASKLQIYVAADVVPAFK 331          
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A168KTU1_ABSGL (Wheel domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168KTU1_ABSGL)

HSP 1 Score: 77.4 bits (189), Expect = 1.140e-11
Identity = 75/274 (27.37%), Postives = 112/274 (40.88%), Query Frame = 0
Query:   97 HEGNERFKRTRLNKMYFKHAALFYTEAIKHAVMAEQTADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALG---PSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWD 367
            ++GN+ FK     K+ ++ A  FYT AI         +D   + A   ANRAA NL + NYG             V R C + L L P N                         VK  +R A+ L  L + DEA DCCV  L +DP +  + +L+ +      D  +RAAA    ++           A   R + +     + +DA+   +          D+DS  + WP+  LYP + +SD ++   E +T   HL V+      P PWD
Sbjct:   84 NQGNDCFKA---GKLKYQDAVSFYTRAID-----TDCSDQALMEACY-ANRAAVNLELGNYG------------KVLRDCAKCLELNPSN-------------------------VKALYRSARGLFQLDRPDEAYDCCVHCLAVDPDNIPVQQLQAKIKKRQDDLKQRAAAKAERLQKEQQAKQQKSDALERRRITINVQDKAMYDAAAIQY----------DADSDTVTWPVFFLYPEHKESDYIQQFDENNTFQDHLDVMLEN---PAPWD 298          
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A0F4ZEU7_9PEZI (Wheel domain-containing protein n=1 Tax=Thielaviopsis punctulata TaxID=72032 RepID=A0A0F4ZEU7_9PEZI)

HSP 1 Score: 75.5 bits (184), Expect = 6.010e-11
Identity = 70/248 (28.23%), Postives = 103/248 (41.53%), Query Frame = 0
Query:  134 ADMVRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTELRTRCAAEARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAY 381
            AD   +  ++ ANRAA NL ++N+             +    C  +LRL P N                         VKC++R AKAL  + + D+A D    GL +DPA+  L   +    A     AE+     XX             A AARG+       +      G+ +   PD D  +S L++P LLLYP + +SD ++  +E D + AHL  +FP      PWD     Y  + +E Y
Sbjct:  142 ADQRAMLESLYANRAACNLELRNF------------RACWTDCTGALRLNPRN-------------------------VKCWYRSAKALLAVDRLDDAADAAARGLAVDPANAALQSTQAAVVARRAAIAEKERREQXXXDTQTRRRELVRTALAARGIRT--RVTEKPPPMEGAAVRLLPDEDDPTSSLVFPTLLLYPTDYESDFIKEWSELDALDAHLGYIFPL-----PWDKDG-NYTLANVECY 344          
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: A0A7S2AVY6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AVY6_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.140e-10
Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 0
Query:  475 ADFDPNKARWLHVHPKCTVSQLLTHPEHVAAGGMVTLHVYARGSEAHAQFLRYNAPRIRELEP 537
            AD  P+   W+ +HP CT+  L+ +PEHV AGG++TLH+Y + SEAH  F++     I+EL P
Sbjct:   59 ADQHPDDQTWVKIHPACTMGDLIKYPEHVLAGGVLTLHMYPKNSEAHRNFVKACKAGIKELMP 121          
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Match: W9YKM2_9EURO (Wheel domain-containing protein n=1 Tax=Capronia coronata CBS 617.96 TaxID=1182541 RepID=W9YKM2_9EURO)

HSP 1 Score: 74.3 bits (181), Expect = 1.380e-10
Identity = 72/250 (28.80%), Postives = 106/250 (42.40%), Query Frame = 0
Query:  137 VRLRATVLANRAAANLGIKNYGXXXXXXXXXXXXSVRRHCDESLRLQPGNSXXXXXXNVNVXXXXXXXXXXXXXXVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPAS----KELTELRTRCAA-EARDAAERAAAAXXXVRAXCXXXXXXFRAAAARGVALGPSAFDASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVGAHLAVVFPEGGPPPPWDAAAYEYRCSRLEAY 381
            + L   +  NRA  NL +KNY             S    C  +LR+ P N                         VK ++R A AL  L +  EA+D    G++IDP +    K L ++RTR  A E +D   +A                  R     G    P+  DA        +  +PDP S +S+L +P++LLYP + QSD++++ AE+DT+  HL+ + P      PWD    EYR   +E Y
Sbjct:  145 IALEEQLYTNRALCNLELKNY------------RSTTLDCAAALRINPTN-------------------------VKAHYRSAAALLALDKVLEALDVASRGIKIDPENGALKKLLDQIRTRAKAKEEQDRRRQAELRRRQQEKATLDAALRARKIQLHGSKHSPNLEDAV-------IRLSPDPLSPTSQLEFPVMLLYPMHNQSDLIKAWAEKDTINQHLSYILPL-----PWDGK-NEYRMDTVECY 344          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353594 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6T6_9STRA0.000e+0100.00Wheel domain-containing protein n=1 Tax=Tribonema ... [more]
D7FKE3_ECTSI3.500e-4027.95Wheel domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A507C9A7_9FUNG3.260e-1729.76Wheel domain-containing protein n=1 Tax=Synchytriu... [more]
A0A1V9YFH9_9STRA8.420e-1630.63Wheel domain-containing protein n=1 Tax=Achlya hyp... [more]
A0A024GLS2_9STRA4.750e-1426.81Wheel domain-containing protein n=1 Tax=Albugo can... [more]
A0A1W0A4K1_9STRA2.070e-1328.44Wheel domain-containing protein n=1 Tax=Thraustoth... [more]
A0A168KTU1_ABSGL1.140e-1127.37Wheel domain-containing protein n=1 Tax=Absidia gl... [more]
A0A0F4ZEU7_9PEZI6.010e-1128.23Wheel domain-containing protein n=1 Tax=Thielaviop... [more]
A0A7S2AVY6_9STRA1.140e-1046.03Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W9YKM2_9EURO1.380e-1028.80Wheel domain-containing protein n=1 Tax=Capronia c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 153..186
e-value: 350.0
score: 1.4
coord: 212..245
e-value: 3.8E-5
score: 33.1
IPR044059Cns1/TTC4, wheel domainPFAMPF18972Wheelcoord: 315..383
e-value: 1.4E-12
score: 47.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 97..278
e-value: 2.7E-17
score: 64.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 143..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..51
NoneNo IPR availablePANTHERPTHR46035:SF1TETRATRICOPEPTIDE REPEAT PROTEIN 4coord: 95..528
NoneNo IPR availablePANTHERPTHR46035TETRATRICOPEPTIDE REPEAT PROTEIN 4coord: 95..528

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_172contigContig_172:109130..112594 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353594mRNA_15801Tribonema minus UTEX_B_3156 mRNAContig_172 109130..112627 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353594|estExt_Genemark1.C_Ctg_1720017 ID=Trimin1|353594|estExt_Genemark1.C_Ctg_1720017|Name=jgi.p|Trimin1|353594|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=538bp
MSPTYRTVALALHWMEAQRRTVALRRGSASDTRDRSAQRDATSAPPGPPR
LHRVRWRDAPRLRVSCATHGGAHTGTARESRKARTGVTMRGIGAPPHEGN
ERFKRTRLNKMYFKHAALFYTEAIKHAVMAEQTADMVRLRATVLANRAAA
NLGIKNYGRAAANLGIKSYGSVRRHCDESLRLQPGNSLRLKPGNVNVRRD
CDESLRLQPGNVKCYFRKAKALEGLKQYDEAVDCCVEGLEIDPASKELTE
LRTRCAAEARDAAERAAAAAAAVRAACDAAARAFRAAAARGVALGPSAFD
ASHAHFGSDLAPTPDPDSDSSELLWPLLLLYPANGQSDVVRSVAERDTVG
AHLAVVFPEGGPPPPWDAAAYEYRCSRLEAYARLGAARAFRDEADCADEV
KASCGASLTSSAAAAALQRALSDALPPLLLLLPLPPPSPPPPLLLPPRVR
ALRGLDTPEAAEKARAEVKQRARSADFDPNKARWLHVHPKCTVSQLLTHP
EHVAAGGMVTLHVYARGSEAHAQFLRYNAPRIRELEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR044059Csn1/TTC4_wheel
IPR011990TPR-like_helical_dom_sf