mRNA_15796 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353591
Unique Name	mRNA_15796
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353591 vs. uniprot
Match: A0A836CLI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLI8_9STRA)

HSP 1 Score: 1145 bits (2963), Expect = 0.000e+0
Identity = 711/711 (100.00%), Postives = 711/711 (100.00%), Query Frame = 1

Query:  112 MATGGAGQAWDQRRMRLLWCAIGGGVAVVTGGKLASLDVRLQQADALAKLGITVPPPGSGWGQGGGGDEASFQMVLRTLNLYRERHGNLRVPEGFIVPKEEPWPKERVRAAKEALKADNFTAACAKLRAIYGQSLPAAPNSGGKGNGKRKHPSLGEPGEQGAWGWRLARRVYSMTFWQSFVAGNAKRRDALEKLGFVWGRLQPNYNLLLEALVIYKSLHGSLHVPRNFIVPDEEPWPQSXXXXXXXXXXXXXXXXXSVRGRSXXXXXXXXXXXXXXXXXXXXXXVRDMRLGRVVTRVRGMGFIFDPFQESFERVRVGLEHYRNITGRMGPVPVRFQVPHEPPWPTALWGFQLGRRLHAVRAEHRYIRTNPLRIRQLNDAAFQWQSRAEAAFARLVRGIKVRDAGAKHRTSDGKCNSFMFARRVRGVKAYKVIMESVTIPVAFTVPPEDPWPQELWGFRLGTALRDVRVKGYYLNKPATRVQRIAQLQALGVWPVTALNPAAVDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAIGTGALQLRERQHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAALEHRSCCDGDACAGVGSRERAMHALLVALRAYRAAHGAAGPPVSFVVPAAEPWPREAWGVKLGARLRDIRRGRVRADRYGAAVTAELETHLGAPLPAQGKER 2244
            MATGGAGQAWDQRRMRLLWCAIGGGVAVVTGGKLASLDVRLQQADALAKLGITVPPPGSGWGQGGGGDEASFQMVLRTLNLYRERHGNLRVPEGFIVPKEEPWPKERVRAAKEALKADNFTAACAKLRAIYGQSLPAAPNSGGKGNGKRKHPSLGEPGEQGAWGWRLARRVYSMTFWQSFVAGNAKRRDALEKLGFVWGRLQPNYNLLLEALVIYKSLHGSLHVPRNFIVPDEEPWPQSXXXXXXXXXXXXXXXXXSVRGRSXXXXXXXXXXXXXXXXXXXXXXVRDMRLGRVVTRVRGMGFIFDPFQESFERVRVGLEHYRNITGRMGPVPVRFQVPHEPPWPTALWGFQLGRRLHAVRAEHRYIRTNPLRIRQLNDAAFQWQSRAEAAFARLVRGIKVRDAGAKHRTSDGKCNSFMFARRVRGVKAYKVIMESVTIPVAFTVPPEDPWPQELWGFRLGTALRDVRVKGYYLNKPATRVQRIAQLQALGVWPVTALNPAAVDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAIGTGALQLRERQHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAALEHRSCCDGDACAGVGSRERAMHALLVALRAYRAAHGAAGPPVSFVVPAAEPWPREAWGVKLGARLRDIRRGRVRADRYGAAVTAELETHLGAPLPAQGKER
Sbjct:    1 MATGGAGQAWDQRRMRLLWCAIGGGVAVVTGGKLASLDVRLQQADALAKLGITVPPPGSGWGQGGGGDEASFQMVLRTLNLYRERHGNLRVPEGFIVPKEEPWPKERVRAAKEALKADNFTAACAKLRAIYGQSLPAAPNSGGKGNGKRKHPSLGEPGEQGAWGWRLARRVYSMTFWQSFVAGNAKRRDALEKLGFVWGRLQPNYNLLLEALVIYKSLHGSLHVPRNFIVPDEEPWPQSXXXXXXXXXXXXXXXXXSVRGRSXXXXXXXXXXXXXXXXXXXXXXVRDMRLGRVVTRVRGMGFIFDPFQESFERVRVGLEHYRNITGRMGPVPVRFQVPHEPPWPTALWGFQLGRRLHAVRAEHRYIRTNPLRIRQLNDAAFQWQSRAEAAFARLVRGIKVRDAGAKHRTSDGKCNSFMFARRVRGVKAYKVIMESVTIPVAFTVPPEDPWPQELWGFRLGTALRDVRVKGYYLNKPATRVQRIAQLQALGVWPVTALNPAAVDAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAIGTGALQLRERQHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAALEHRSCCDGDACAGVGSRERAMHALLVALRAYRAAHGAAGPPVSFVVPAAEPWPREAWGVKLGARLRDIRRGRVRADRYGAAVTAELETHLGAPLPAQGKER 711

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BLAST of jgi.p|Trimin1|353591 vs. uniprot
Match: D7G5K9_ECTSI (HA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5K9_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 1.100e-51
Identity = 142/443 (32.05%), Postives = 190/443 (42.89%), Query Frame = 1

Query:  310 GDEASFQMVLRTLNLYRERHGNLRVPEGFIVPKEEPWPKERVRAAKEALKADNFTAACAKLRAIYGQSLPAAPNSGGKGNGKRKHPSLGEPGEQGAWGWRLARRVYSMTFWQSFVAGNAKRRDALEKLGFVWGRLQPNYNLLLEALVIYKSLHGSLHVPRNFIVPDEEPWPQSXXXXXXXXXXXXXXXXXSVRGRSXXXXXXXXXXXXXXXXXXXXXXVRDMRLGRVVTRVRG-----------------MGFIFDPFQESFERVRVGLEHYRNITGRMGPVPVRFQVPHEPPWPTALWGFQLGRRLHAVRAEHRYIRTNPLRIRQLNDAAFQWQSRAEAAFARLVRGIKVRDAGAKHRTSDGKCNSFMFARRVRGVKAYKVIMESVTIPVAFTVPPEDPWPQELWGFRLGTALRDVRVKGYYLNKPATRVQRIAQLQALGVW 1587
            GD A ++  L  L  Y  +HGNL + + +++P EE                DN            G  L              +H            GWRL ++VY+M FW+  V     RR  L KLGFVWGRLQ  YNL LEAL+ Y+ + G L VP +F+VP+ EPWP S                                              + MRLG  V  VR                  +GF++D     F +V   L  Y+   G +  VPV F VP  PPW   LWG  LG+R+  +RA HRYIR +P RIR LN+  F+W    +A++  +VR +K                     R+++G          +++P +F VP   PWPQ  WG RLGTAL D+R KG YL K   R QR  +L+ LGV+
Sbjct:  164 GDRAEYESALVALKAYHRQHGNLLLTQNYVMPDEE----------------DN------------GNML--------------EHR-----------GWRLGQKVYTMKFWKRHVRDRPSRRAELAKLGFVWGRLQDEYNLFLEALLAYRDIEGCLLVPTSFVVPETEPWPLSC---------------------------------------------QGMRLGAKVAGVRNQSLYVRTDVARWYQLDAIGFVWDLSDAPFRQVYDALLQYKAEHGNLH-VPVAFSVPSSPPWHQDLWGLALGQRVLDIRATHRYIRNDPERIRLLNEVGFRWTDATKASYGNVVRALKA-------------------YRKIKG--------RDLSVPSSFVVPSFLPWPQSCWGLRLGTALVDIRSKGRYL-KGEERQQRRMELERLGVF 479

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BLAST of jgi.p|Trimin1|353591 vs. uniprot
Match: A0A1Z5KBG8_FISSO (HA domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBG8_FISSO)

HSP 1 Score: 143 bits (361), Expect = 6.100e-34
Identity = 101/349 (28.94%), Postives = 154/349 (44.13%), Query Frame = 1

Query:  598 WGWRLARRVYSMTFWQSFVAGNAKRRDALEKLGFVWGRLQPNYNLLLEALVIYKSLHGSLHVPRNFIVP-DEEPWPQSXXXXXXXXXXXXXXXXXSVRGRSXXXXXXXXXXXXXXXXXXXXXXVRDMRLGRVVTRVRGMGFIFDPFQESFERVRVGLEHYRNIT--GRMGP--------VPVRFQVPHEPP-WPTALWGFQLGRRLHAVRAEHRYIRTNPLRIRQLNDAAFQWQSRAEAAFARLVRGIKVRDAGAKHRTSDGKCNSFMFARRVRGVKAYKVIMESVTIPVAFTVPPED-------PWPQELWGFRLGTALRDVRVKGYYLNKPATRVQRIAQLQALGVW 1587
            +G  L+  VY+M +WQ  +     R   L +LGFVW RLQP +NL+LEAL+ Y +LHG + VP  F+VP  +  WP++                  +R R                       +R         ++ G+GF++D  +E F +    + HY  +   G   P        VP ++ VP E P WP A WG+ LG + HAVR +  Y++ +P R R L +  F+W   +   +  +V    +                             K+   S+ +P+ F VP  D       PWP+ LWG  LG  L+D+R+KG Y+  P  + +RI QL+ LG +
Sbjct:   40 YGLDLSSTVYNMKWWQLHIQQRPDRVAELNRLGFVWERLQPEWNLVLEALITYYNLHGHVLVPNQFVVPLGDVQWPRATWGIPLGKSVYR------IRARHDF--------------------LRGPTAEARRQQLDGLGFVWDVHEERFLKFYNVVWHYAQLEQCGPFSPGERTQVLKVPAQYVVPCEDPQWPEAFWGYPLGVKCHAVRQKGLYVKKHPERRRLLEELGFRWTGNSNLGWLEVVHAAAIYS---------------------------KLHNRSLDVPIKFVVPKPDEWTEVEWPWPEHLWGLPLGQRLKDIRLKGAYVKGPK-KEERIRQLETLGFY 334

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BLAST of jgi.p|Trimin1|353591 vs. uniprot
Match: B8C2M9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2M9_THAPS)

HSP 1 Score: 145 bits (365), Expect = 8.150e-34
Identity = 114/435 (26.21%), Postives = 173/435 (39.77%), Query Frame = 1

Query:  316 EASFQMVLRTLNLYRERHGNLRVPEGFIVPKEEPWPKERVRAAKEALKADNFTAACAKLRAIYGQSLPAAPNSGGKGNGKRKHPSLGEPGEQGAW-GWRLARRVYSMTFWQSFVAGNAKRRDALEKLGFVWGRLQPNYNLLLEALVIYKSLHGSLHVPRNFIVPDEEPWPQSXXXXXXXXXXXXXXXXXS-VRGRSXXXXXXXXXXXXXXXXXXXXXXVRDMRLGRVVTRVRGMGFIFDPFQESFERVRVGLEHYRNITGRMGPVPVRFQVP--HEPPWPTALWGFQLGRRLHAVRAEHRYIRTNPLRIRQLNDAAFQWQSRAEAAFARLVRGIKVRDAGAKHRTSDGKCNSFMFARRVRGVKAYKVIMESVTIPVAFTVPPED------PWPQELWGFRLGTALRDVRVKGYYLNKPATRVQRIAQLQALG-VW 1587
            + ++   L+ L  Y   HG+L +P  F+VP  + +P+E                                                        W G + ARR+Y+M +W   VA N+ R   L KL F+WGRLQ  ++L +E+LV Y S++G + VP +FIVP E+ WP++                   V G++                      ++  R  ++  ++     +       F  +RV               P +F VP  HE  WP  LW +QLG +  AVR +  Y++ +P R RQL +  F+W   A   +  +V       A A +    G+                      + +P  F VP         PWP++LWG RLG  L+DVR+KG Y+ K      R+AQL+ALG VW
Sbjct:   79 DLTYNSALQVLTAYHTIHGDLVIPRKFVVPATDEYPRE--------------------------------------------------------WHGTKPARRIYNMRWWALHVAQNSDRVAQLNKLDFIWGRLQSEWSLFMESLVYYYSIYGDVLVPVSFIVPREDDWPKACWDFPLGDFAHRIRFRNDFVTGKNAHERRSQLDGLGYVWDVNEYKYMKFFRALKIFDKLEKKRTVQSTTSREFSTIRV---------------PSKFVVPSGHENGWPEDLWDYQLGAKTMAVRQKQLYVKNHPDRKRQLEEIGFRWSGNATLGWLDVVH------AAAIYSQMHGRV---------------------LNVPFDFVVPEPPRAQESWPWPEQLWGLRLGQRLKDVRLKGSYI-KGKDGPTRVAQLEALGFVW 414

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BLAST of jgi.p|Trimin1|353591 vs. uniprot
Match: A0A7S4K5S7_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K5S7_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.290e-31
Identity = 130/460 (28.26%), Postives = 177/460 (38.48%), Query Frame = 1

Query:  304 GGGDEASFQ---MVLRTLNLYRERHGNLRVPEGFIVPKEEPWPKERVRAAKEALKADNFTAACAKLRAIYGQSLPAAPNSGGKGNGKRKHPSLGEPGEQGAW-GWRLARRVYSMTFWQSFVAGNAKRRDALEKLGFVWGRLQPNYNLLLEALVIYKSLHGSLHVPRNFIVP--DEEPWPQSXXXXXXXXXXXXXXXXXSVRGRSXXXXXXXXXXXXXXXXXXXXXXVRDMRLGRVVTRVRGMGFIFDPFQESFERVRVGLEHYRNITGRMGP------------------------VPVRFQVPH--EPPWPTALWGFQLGRRLHAVRAEHRYIRTNPLRIRQLNDAAFQWQSRAEAAFARLVRGIKVRDAGAKHRTSDGKCNSFMFARRVRGVKAYKVIMESVTIPVAFTVPPED--PWPQELWGFRLGTALRDVRVKGYYLNKPATRVQRIAQLQALG 1581
            GGG  A ++     +  L  Y   HG+L +P  F+VP  E +P+E                                                        W G  L+  VY M +WQ  V  NA R   L  LGFVW RLQP +NL+LEALV Y    G + VP +F+VP  D+E WP++                  +R  S                      +R         ++ G+GF++D  + +F R    L+H+R +  R                           VP  F VP   E  WP  LWG  LG +  A+R +  Y++  P R R L +  FQW   A   + ++V    V  +    RT D   N  + A         +     V   V  T   ED  PWP++LWGF LG  L+DVR+KG YL   A   +R AQL ALG
Sbjct:   50 GGGRAAMYRPYGSAIEALRAYHSVHGDLVIPRRFVVPGSEEYPEE--------------------------------------------------------WHGIDLSSSVYDMRWWQLHVRSNADRVAELNSLGFVWERLQPEWNLVLEALVAYSMKCGHVLVPSSFVVPRGDDETWPRATW---------------GIRLGSCVHRMRIRHDF-----------LRGPTAASRKAQLDGLGFVWDVNERAFLRTYRALKHFRRMERRGXXXXXXXXXXXXXXXXXXXRRYKALRVPSTFVVPEGEERGWPEDLWGLPLGAKCSAIRHKGLYVKNQPDRQRALEELGFQWSGNATLGWLQVVHAAAV-FSRLHGRTLDVPINFVVPAPPTHRAPDEQESDGGVDHRVTGT---EDAWPWPEQLWGFPLGQRLKDVRLKGAYLTGDAASSRR-AQLDALG 422

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BLAST of jgi.p|Trimin1|353591 vs. uniprot
Match: A0A7S3DW30_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DW30_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.610e-30
Identity = 115/444 (25.90%), Postives = 169/444 (38.06%), Query Frame = 1

Query:  322 SFQMVLRTLNLYRERHGNLRVPEGFIVPKEEPWPKERVRAAKEALKADNFTAACAKLRAIYGQSLPAAPNSGGKGNGKRKHPSLGEPGEQGAWGWR---LARRVYSMTFWQSFVAGNAKRRDALEKLGFVWGRLQPNYNLLLEALVIYKSLHGSLHVPRNFIVP-DEEPWPQSXXXXXXXXXXXXXXXXXS-VRGRSXXXXXXXXXXXXXXXXXXXXXXVRDMRLGRVVTRVRGMGFIFDPFQESFERVRVGLEHYRNIT--------GRMGP--VPVRFQVPHEPPWPTALWGFQLGRRLHAVRAEHRYIRTNPLRIRQLNDAAFQWQSRAEAAFARLVRGIKVRDAGAKHRTSDGKCNSFMFARRVRGVKAYKVIMESVTIPVAFTVP--PED-------PWPQELWGFRLGTALRDVRVKGYYLNKPATRVQRIAQLQALG 1581
            +++  L  L +Y   HG++ +P  F++P E+                                               ++ P +          WR   L   VY+M +WQ  V    +R   L +LGFVW RLQP +NL+LEAL+ Y S++G + VP  F+VP   + WP++                   +RG S                       RD        ++ G+GF++D  +  F      L H+  +          R  P  VP  + VP  P WP  +WG+ LG R  A+R +  YI+  P R   L++  F W   A+  +  +V    +      HR  D                          +P  F VP  PED       PWP+ LWG  LG  L+DVR KG YL+      +R+ QL ALG
Sbjct:   94 TYESALHALRIYHSIHGDVVIPRRFVIPAED-----------------------------------------------QRFPQI----------WRNVDLGGVVYNMRWWQKHVQQRPERVAQLNELGFVWERLQPEWNLVLEALITYSSIYGHVLVPSKFVVPYGNDQWPKATWGITLGDCIYRIRARNDFLRGSSSIAR-------------------RD--------QLDGLGFVWDVHEHRFRTFYGTLRHFARLNQMGAFSKDARTKPLRVPSTYTVPKSPEWPRGVWGYPLGARCSAIRQKELYIKGEPQRRMMLDELGFHWSGNADFGWLVVVHAAAIYSR-LHHRKLD--------------------------VPSHFKVPYPPEDLVDKDEWPWPEHLWGLPLGQRLKDVRCKGAYLHGELGEKRRM-QLDALG 425

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BLAST of jgi.p|Trimin1|353591 vs. uniprot
Match: A0A7S4EQH0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQH0_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.680e-28
Identity = 102/340 (30.00%), Postives = 152/340 (44.71%), Query Frame = 1

Query:  610 LARRVYSMTFWQSFVAGNAKRRDALEKLGFVWGRLQPNYNLLLEALVIYKSLHGSLHVPRNFIVP-DEEPWPQSXXXXXXXXXXXXXXXXXSVRGRSXXXXXXXXXXXXXXXXXXXXXXVRDMRLGRVVTRVRGMGFIFDPFQESFERVRVGLEHYRNITGRMG--------PVPVRFQVPHEPPWPTALWGFQLGRRLHAVRAEHRYIRTNPLRIRQLNDAAFQWQSRAEAAFARLVRGIKVRDAGAKH-RTSDGKCN---SFMFARRVRGVKAYKVIMESVTIPVAFTVPPED---PWPQELWGFRLGTALRDVRVKGYYLNKPATRVQRIAQLQALG 1581
            LA  VY+M +WQ  V     R   L ++GF+W RLQP +NL+ E+L+IYK+L+G++ VP  F+VP D++ WP++                  +R R                                  ++  +GF++D  +  F +    LE Y  I  +           VP +F +P    WPT+LWG++LG R   VR +  YI+ +  R++ L D  F             +R ++V  A A + + +D K +    F+     R V A     E+   P    V   D   PWP+ LW F LG  LRD+RVKG YL   +   +R  QL ALG
Sbjct:  201 LAGTVYTMRWWQRHVKNQPNRVSELNRIGFIWERLQPEWNLIFESLIIYKALYGNILVPSTFVVPNDDDRWPKACWGISLGNSVY------KIRNRGDYLGGINNNSHSRRE------------------QLDALGFVWDVQELRFSKFSTALELYGKIEQKQQRSSHSGALKVPSQFVIPRSSRWPTSLWGYRLGERCTQVRQKELYIKGHAHRVKILADLGFYLSGGNNN-----LRWLEVVHAAAVYSQMNDKKLDVPTKFVVPAPPRRVAASPKDDENERDPGPSRVVGSDDAWPWPEYLWEFPLGQRLRDIRVKGNYLKGKSGGARR-KQLDALG 510

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BLAST of jgi.p|Trimin1|353591 vs. uniprot
Match: K0R3Q0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R3Q0_THAOC)

HSP 1 Score: 129 bits (324), Expect = 2.190e-28
Identity = 119/451 (26.39%), Postives = 170/451 (37.69%), Query Frame = 1

Query:  325 FQMVLRTLNLYRERHGNLRVPEGFIVPKEEPWPKERVRAAKEALKADNFTAACAKLRAIYGQSLPAAPNSGGKGNGKRKHPSLGEPGEQGAW-GWRLARRVYSM-TFWQSFVAGNAKRRDALEKLGFVWGRLQPNYNLLLEALVIYKSLHGSLHVPRNFIVPDEEPWPQSXXXXXXXXXXXXXXXXXSVRGRSXXXXXXXXXXXXXXXXXXXXXXVRDMRLGRVVTRV-------------RGMGFIFDPFQESFERVRVGLEHYRNITGRMGPV--PVRFQVPHEPPWPTALWGFQLGRRLHAVRAEHRYIRTNPLRIRQLNDAAFQWQSRAEAAFARLVRGIKVRDAGAKHRTSDGKCNSFMFARRVRGVKAYKVIMESV-TIPVAFTVP--PED---------PWPQELWGFRLGTALRDVRVKGYYLNKPATRVQRIAQLQALG-VW 1587
            ++  LR L  +   HG+L +P  F+VP    +P E                                                        W G RL+  VY+   FW   +A    R   L KLGF+W RLQP +NL +EAL +YK++HG + VP  F+VP    W ++                  +R R                        R ++LG+  TR                +GF++D  +  F++    ++++R I  +   V  P +F VP E  WP  LW + LG R  AVR +  Y++  P R R L +  F  Q                 D  AK            +   V+    Y  +   V  +P+ F VP  P D         PWP+ LWG +LG  L+DVR KG YL      ++R AQL  LG VW
Sbjct:   53 YESTLRVLQSFYNIHGDLVIPRNFVVPASNEYPVE--------------------------------------------------------WHGVRLSAYVYTRHRFWSKHIAERKDRAAQLGKLGFLWERLQPEWNLFIEALSVYKAIHGDVLVPAKFVVPRSGEWSKACWELPLGSTVQR------IRIRHDYLTGDNSYE-------------RRLQLGKEETRFIVCVFSFLPEPEPDRLGFVYDVSEVKFDKFLTAVKYFRAIKRQRSTVRIPSKFVVPREKGWPEELWDYPLGARSLAVRQKQLYVKGRPDRQRDLEEVGFMLQ-----------------DGNAK----------LGWLAVVQAAAIYSQMHNKVLNVPLNFVVPGPPLDADVNCYENWPWPRRLWGLKLGQRLKDVRQKGAYLKGSDAGIRR-AQLNQLGFVW 400

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BLAST of jgi.p|Trimin1|353591 vs. uniprot
Match: A0A1E7FAY6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAY6_9STRA)

HSP 1 Score: 123 bits (308), Expect = 8.190e-27
Identity = 96/347 (27.67%), Postives = 145/347 (41.79%), Query Frame = 1

Query:  610 LARRVYSMTFWQSFVAGNAKRRDALEKLGFVWGRLQPNYNLLLEALVIYKSLHGSLHVPRNFIVP-DEEPWPQSXXXXXXXXXXXXXXXXXSVRGRSXXXXXXXXXXXXXXXXXXXXXXVRDMRLGRVVTRVRGMGFIFDPFQESFERVRVGLE-------HYRNITGRMGPVPVRFQVPHEPPWPTALWGFQLGRRLHAVRAEHRYIRTNPLRIRQLNDAAFQWQSRAEAAFARLVRGIKVRDAGAKHRTSDGKCNSFMFARRVRGVKAYKVIME-SVTIPVAFTVPPED--------------PWPQELWGFRLGTALRDVRVKGYYLNKPATRVQRIAQLQALG 1581
            LA  VY+M +WQ  +     R   L K+GFVW RLQP +NL+LE+L++YK+L+G++ VP NF VP D++ W ++                  +R R                                  ++  +GF++D  +  F +  + L+       H+  I  +   VP ++ VP    WP  LWG++LG R   +R +  YI+ +P R++ L D  F                            + G  N+  +   V     Y  +   S+ +P  F VP                 PWP+ LWG  LG  LRD+RVKG YL    +  +R  QL ALG
Sbjct:   53 LAGTVYNMRWWQEHIKEQPDRVSELNKMGFVWERLQPEWNLILESLIMYKALNGNVLVPSNFTVPHDDDRWSKACWGISLGNSVY------KIRNRGDHLSGNNPNAFSRRK------------------QLDAIGFVWDVQELRFTKFCIALQLFGRIEQHHDTIAVK---VPSQYIVPRSSRWPNELWGYRLGERCTQIRQKELYIKGHPHRLKILADYGFY--------------------------ITGGSNNNLRWLEVVHAAAVYSQMNNNSLDVPSKFVVPAPPRRIASLVVGSDDAWPWPECLWGVPLGQRLRDIRVKGNYLKGKNSDARR-QQLDALG 345

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BLAST of jgi.p|Trimin1|353591 vs. uniprot
Match: A0A448YWN7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YWN7_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.050e-26
Identity = 116/459 (25.27%), Postives = 166/459 (36.17%), Query Frame = 1

Query:  325 FQMVLRTLNLYRERHGNLRVPEGFIVPKEEPWPKERVRAAKEALKADNFTAACAKLRAIYGQSLPAAPNSGGKGNGKRKHPSLGEPGEQGAW-GWRLARRVYSMTFWQSFVAGNAKRRDALEKLGFVWGRLQPNYNLLLEALVIYKSLHGSLHVPRNFIVP-DEEPWPQSXXXXXXXXXXXXXXXXXSVRGRSXXXXXXXXXXXXXXXXXXXXXXVRDMRLGRVVTRVRGMGFIFDPFQESFERVRVGLEHY---------RNITGRMGPVPVRFQVPHEPPWPTALWGFQLGRRLHAVRAEHRYIRTNPLRIRQLNDAAFQWQSRAEAAFARLVRGIKVRDAGAKHRTSDGKCNSFMFARRVRGVKAYKVIMES-VTIPVAFTVPPED----------------------------PWPQELWGFRLGTALRDVRVKGYYLNKPATRVQRIAQLQALG 1581
            F+  L+ L  + + H +L +P  F+VP+   +P                                                          W G  LA  VY+M +WQ  V     R   L ++GFVW RLQP +NL+LE+L+IYK++ GS  VP  F+VP D+  WP++                  +R R                        R+        ++  +GF++D  +  F +    LE Y          N +G +  VP +F VP    WPT +WG+ LG R   VR +  YI+ +P R+R L D  F                           TS G  N+  +   V     Y  +  + + +P  F VP                               PWP+ LW F LG  LRD+RVKG YL       +R  QL ALG
Sbjct:  161 FEDTLQALQAFHDEHSHLVIPRRFVVPESSSYPS--------------------------------------------------------VWHGIDLAGTVYTMRWWQRHVKNQPDRVSELNRIGFVWERLQPEWNLILESLIIYKAIFGSTLVPSTFVVPNDDNRWPKACWGISLGNSVY------KIRNRGDYLG------------------ARNSNSLSRRAQLDAIGFVWDVQELRFSKFTTALELYGKVEQHHQESNHSGALK-VPSKFVVPRSSRWPTDMWGYPLGERCTQVRQKELYIKGHPDRVRILADLGFY--------------------------TSGGN-NNLRWLEVVHAAAVYSQMNNNQLDVPTKFVVPAPPRXXXXXXXXXXXXXDSGASRLVGSDDAWPWPEYLWNFPLGQRLRDIRVKGNYLKGENGDARR-RQLDALG 510

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353591 vs. uniprot

BLAST of jgi.p|Trimin1|353591 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CLI8_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D7G5K9_ECTSI	1.100e-51	32.05	HA domain-containing protein n=2 Tax=Ectocarpus Ta...	[more]
A0A1Z5KBG8_FISSO	6.100e-34	28.94	HA domain-containing protein n=1 Tax=Fistulifera s...	[more]
B8C2M9_THAPS	8.150e-34	26.21	Uncharacterized protein n=1 Tax=Thalassiosira pseu...	[more]
A0A7S4K5S7_9STRA	1.290e-31	28.26	Hypothetical protein n=3 Tax=Odontella aurita TaxI...	[more]
A0A7S3DW30_9STRA	2.610e-30	25.90	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
A0A7S4EQH0_9STRA	1.680e-28	30.00	Hypothetical protein n=1 Tax=Pseudo-nitzschia aust...	[more]
K0R3Q0_THAOC	2.190e-28	26.39	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
A0A1E7FAY6_9STRA	8.190e-27	27.67	Uncharacterized protein n=1 Tax=Fragilariopsis cyl...	[more]
A0A448YWN7_9STRA	1.050e-26	25.27	Uncharacterized protein n=1 Tax=Pseudo-nitzschia m...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_172	contig	Contig_172:86849..96308 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353591\|estExt_Genemark1.C_Ctg_1720012
Description	Helicase associated domain
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2B9HJ@1\|root,2S0TY@2759\|Eukaryota
Evalue	1.08e-52
Seed ortholog	2880.D7G5K9
Hectar predicted targeting category	signal peptide
Ec32 ortholog description	Helicase-associated
Ec32 ortholog	Ec-22_001050.1
TranscriptId	353913
Track	FilteredModels1
ProteinId	353591

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353591	gene_15796	Tribonema minus UTEX_B_3156	gene	Contig_172 86849..96308 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353591	Trimin1\|353591\|estExt_Genemark1.C_Ctg_1720012	Tribonema minus UTEX_B_3156	polypeptide	Contig_172 86960..96308 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_15796_1	exon_15796_1	Tribonema minus UTEX_B_3156	exon	Contig_172 86849..86972 +
exon_15796_2	exon_15796_2	Tribonema minus UTEX_B_3156	exon	Contig_172 87152..87219 +
exon_15796_3	exon_15796_3	Tribonema minus UTEX_B_3156	exon	Contig_172 87923..88156 +
exon_15796_4	exon_15796_4	Tribonema minus UTEX_B_3156	exon	Contig_172 88464..88621 +
exon_15796_5	exon_15796_5	Tribonema minus UTEX_B_3156	exon	Contig_172 89467..89529 +
exon_15796_6	exon_15796_6	Tribonema minus UTEX_B_3156	exon	Contig_172 90349..90525 +
exon_15796_7	exon_15796_7	Tribonema minus UTEX_B_3156	exon	Contig_172 90651..90719 +
exon_15796_8	exon_15796_8	Tribonema minus UTEX_B_3156	exon	Contig_172 90774..90850 +
exon_15796_9	exon_15796_9	Tribonema minus UTEX_B_3156	exon	Contig_172 91457..91491 +
exon_15796_10	exon_15796_10	Tribonema minus UTEX_B_3156	exon	Contig_172 92119..92189 +
exon_15796_11	exon_15796_11	Tribonema minus UTEX_B_3156	exon	Contig_172 92849..92947 +
exon_15796_12	exon_15796_12	Tribonema minus UTEX_B_3156	exon	Contig_172 93620..93775 +
exon_15796_13	exon_15796_13	Tribonema minus UTEX_B_3156	exon	Contig_172 93884..93944 +
exon_15796_14	exon_15796_14	Tribonema minus UTEX_B_3156	exon	Contig_172 94785..94832 +
exon_15796_15	exon_15796_15	Tribonema minus UTEX_B_3156	exon	Contig_172 95502..96308 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_15796	UTR5_15796	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_172 86849..86959 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_15796	CDS_15796	Tribonema minus UTEX_B_3156	CDS	Contig_172 86960..86972 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_172:86849..96308+
coding sequence from alignment at Contig_172:86849..96308+

spliced messenger RNA

>mRNA_15796 ID=mRNA_15796|Name=jgi.p|Trimin1|353591|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2247bp|location=Sequence derived from alignment at Contig_172:86849..96308+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGGAAGGGGATGGCCGGATAGGTGGTCGGTGCTGCCGAGGTCATGTTTCT
TCAGGCTCTGGGAAAAAGTGGCGGGGGTGGAGGGCGATAACGTCGCGGCA
GAGCTGTTGAGATGGCGACAGGCGGCGCGGGCCAGGCGTGGGATCAGCGG
CGGATGCGGCTGCTGTGGTGCGCCATTGGCGGCGGCGTGGCGGTGGTGAC
TGGCGGCAAGCTGGCGAGCCTGGACGTGCGCTTGCAGCAGGCGGATGCAC
TGGCAAAGCTGGGCATCACCGTGCCGCCGCCAGGCAGCGGCTGGGGGCAA
GGCGGGGGCGGCGACGAGGCATCTTTTCAGATGGTGCTGCGGACGCTGAA
TCTGTACCGCGAGCGCCATGGGAATCTGAGGGTGCCGGAGGGGTTCATTG
TGCCTAAAGAAGAGCCGTGGCCTAAGGAGCGAGTGCGGGCCGCCAAGGAA
GCGCTCAAGGCCGACAACTTTACGGCCGCCTGCGCTAAACTCCGCGCCAT
CTACGGGCAGTCCCTGCCAGCCGCGCCTAACAGCGGCGGCAAGGGTAACG
GCAAGCGCAAGCACCCCTCCCTCGGCGAGCCGGGCGAGCAGGGAGCGTGG
GGCTGGCGGCTGGCGCGGCGGGTGTACTCCATGACTTTCTGGCAGAGCTT
TGTGGCGGGCAACGCGAAGCGGCGCGACGCGCTGGAGAAGCTGGGCTTTG
TGTGGGGGCGCCTGCAGCCCAACTACAACCTGCTGCTGGAGGCGCTGGTC
ATCTACAAGAGCCTCCACGGGTCGCTGCACGTGCCGCGCAATTTTATCGT
TCCCGATGAGGAGCCCTGGCCGCAGTCGCTGCACGTGCCGCGCGACTGTA
TCGTCTCCGACGAGAAGCCCTTGCCGCAGTCCGTCCGAGGCAGGAGCCTC
GATGGGTCGCTGCACGTGCCGCGCAATTTCATCGTTCCCGACGAGGAGCC
CTGGCTGCAGTCCGTCCGAGACATGCGGCTGGGGCGCGTCGTGACGCGCG
TGCGCGGCATGGGCTTCATTTTTGACCCCTTCCAGGAGTCCTTCGAGCGC
GTGCGTGTGGGTCTAGAGCACTACAGGAACATCACGGGACGCATGGGGCC
AGTTCCCGTGCGCTTCCAGGTGCCGCACGAACCTCCCTGGCCGACCGCGC
TGTGGGGGTTCCAACTCGGCCGCAGGCTGCACGCGGTGCGCGCCGAGCAC
CGCTACATCCGCACCAACCCGCTGCGCATCCGCCAGCTCAACGACGCCGC
GTTCCAGTGGCAGTCGCGCGCGGAGGCGGCGTTCGCGCGCCTCGTCCGCG
GCATTAAGGTGCGCGACGCCGGTGCGAAGCACCGCACATCGGACGGCAAG
TGCAACTCGTTCATGTTCGCGCGCCGCGTGCGCGGCGTCAAGGCCTACAA
GGTCATCATGGAGTCGGTGACGATACCCGTCGCTTTTACGGTGCCCCCCG
AGGACCCCTGGCCGCAGGAGCTGTGGGGCTTCCGCCTCGGCACCGCGCTG
CGCGACGTGCGCGTCAAGGGCTACTACCTCAACAAGCCGGCCACGCGCGT
GCAGCGCATCGCACAGCTGCAGGCGCTCGGCGTCTGGCCCGTCACAGCGC
TCAACCCGGCTGCAGTGGACGCTGCTGCAGCTGACAGCGCCGCAGGCTCT
GGCCGCGGCAGCAGTGCGGCAGCCGCCGCCGCAATTGGTGCCGCTGGTGC
TGCCGCCAGCAGCGGCGGTGCTGCTGCCAACAGTGCCATTGGGACGGGCG
CGCTGCAGCTGCGTGAGCGGCAGCACGCCGCCGGCGCCGCGTCGCCGCAG
GAACAGCAGCGGCATGCGCGCCGCGTGTCCTCTGCCATGCTGCGGCAGCA
GAGCAGCGCCGGCGGCGGCAGCGGCGCTGCGGCCGCCGTGCTGCAGCAGC
GCGGCGCGAGCGGCGCGGCAGCCGTCGCGACCGCCGCGCTCGAGCACCGC
AGCTGCTGCGACGGCGACGCGTGCGCCGGCGTCGGGAGCCGCGAGCGCGC
CATGCATGCGCTGCTGGTGGCGCTGCGCGCGTACCGCGCGGCGCACGGCG
CCGCCGGCCCGCCCGTCTCGTTTGTCGTGCCCGCCGCCGAGCCGTGGCCG
CGCGAGGCGTGGGGGGTGAAGCTGGGGGCGCGGCTGCGCGACATCCGGCG
CGGTCGTGTGCGCGCGGACCGGTACGGCGCGGCGGTGACGGCGGAGCTCG
AGACGCACCTGGGCGCGCCGCTGCCGGCGCAGGGCAAGGAGCGCTGA

protein sequence of jgi.p|Trimin1|353591

>Trimin1|353591|estExt_Genemark1.C_Ctg_1720012 ID=Trimin1|353591|estExt_Genemark1.C_Ctg_1720012|Name=jgi.p|Trimin1|353591|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=712bp
MATGGAGQAWDQRRMRLLWCAIGGGVAVVTGGKLASLDVRLQQADALAKL
GITVPPPGSGWGQGGGGDEASFQMVLRTLNLYRERHGNLRVPEGFIVPKE
EPWPKERVRAAKEALKADNFTAACAKLRAIYGQSLPAAPNSGGKGNGKRK
HPSLGEPGEQGAWGWRLARRVYSMTFWQSFVAGNAKRRDALEKLGFVWGR
LQPNYNLLLEALVIYKSLHGSLHVPRNFIVPDEEPWPQSLHVPRDCIVSD
EKPLPQSVRGRSLDGSLHVPRNFIVPDEEPWLQSVRDMRLGRVVTRVRGM
GFIFDPFQESFERVRVGLEHYRNITGRMGPVPVRFQVPHEPPWPTALWGF
QLGRRLHAVRAEHRYIRTNPLRIRQLNDAAFQWQSRAEAAFARLVRGIKV
RDAGAKHRTSDGKCNSFMFARRVRGVKAYKVIMESVTIPVAFTVPPEDPW
PQELWGFRLGTALRDVRVKGYYLNKPATRVQRIAQLQALGVWPVTALNPA
AVDAAAADSAAGSGRGSSAAAAAAIGAAGAAASSGGAAANSAIGTGALQL
RERQHAAGAASPQEQQRHARRVSSAMLRQQSSAGGGSGAAAAVLQQRGAS
GAAAVATAALEHRSCCDGDACAGVGSRERAMHALLVALRAYRAAHGAAGP
PVSFVVPAAEPWPREAWGVKLGARLRDIRRGRVRADRYGAAVTAELETHL
GAPLPAQGKER*

mRNA from alignment at Contig_172:86849..96308+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_15796 ID=mRNA_15796|Name=jgi.p|Trimin1|353591|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9460bp|location=Sequence derived from alignment at Contig_172:86849..96308+ (Tribonema minus UTEX_B_3156 )
CGGAAGGGGATGGCCGGATAGGTGGTCGGTGCTGCCGAGGTCATGTTTCT
TCAGGCTCTGGGAAAAAGTGGCGGGGGTGGAGGGCGATAACGTCGCGGCA
GAGCTGTTGAGATGGCGACAGGCGGTAGAGATGGGGTTGGTGGGGGCCGT
CTAAGCTCTGCCTCGTCGATTCGCGTGTGTTGCCGAAAATAGCTCGCCAC
CATCAAGGTGTGAATCAAACACGAATGGACAGCGAGGACTTCAAGTAAGT
GAAGTTTGGCAAACCCAACTTTTGAGGGTGCCGCTGGACACGGCCGCGGG
CAGGCGCGGGCCAGGCGTGGGATCAGCGGCGGATGCGGCTGCTGTGGTGC
GCCATTGGCGGCGGCGTGGCGGTGACTGCCGCTGCCAGTGCCCTGGGCGC
TCCTCAGGCTGCTTTCAGACCTTTGGGTGCTCTCGGCACGCAGCACCTCT
ACCGACCATGCAGCGCGCGGCAGGCTGCGCCGGCTTCAGGCGACCACTTT
AATCCAGTCTCCGACAGCTTTCCCAATGCGACTGTGCCTGGCGGCAAAGT
TGCGCAGGTGTGTCAAGGAGAGCTGCATGCGTGCGCGTACGTAGCAAAGC
AATCATGCTGCACCATCAGGGGAAGCACTTTGACCAAACTATGCACGTGC
TATTTCAGCTACATCTGCGCTGCTGACGATCGCATGGCGCGCGAAGAGAA
CTGCTCTGTCCTGCCATGCGTCTTTTCGAATGAATGTCCGCTTTCAACCA
TGCAGGCATGCTGCTTGCAATGATGATGATGATGATGCCGCCAAGTATCG
CAAGAGCCGTACAGCAACCCATCAGCATACTCTACCATGATGTACTGTGT
GGCTGATTTGCACGCCGTAATTGCCACAGCTGAATGGCAGACATTGGCCC
TGTCGACATTCAGACCAGGATCGCCTCACCCTAAGAGTGTACCTACTGCC
GACCAAATATTGAGTGCTGCCGACTCATCAGACGTCGCTGACAGCAAGCA
AGACGTCTCTGCTGAGTCTTATGTTCTTTTGTCCTCATCTAACAAACCAA
TGTCACACGCATTCCTGCTGACAGGTGGTGACTGGCGGCAAGCTGGCGAG
CCTGGACGTGCGCTTGCAGCAGGCGGATGCACTGGCAAAGCTGGGCATCA
CCGTGCCGCCGCCAGGCAGCGGCTGGGGGCAAGGCGGGGGCGGCGACGAG
GCATCTTTTCAGATGGTGCTGCGGACGCTGAATCTGTACCGCGAGCGCCA
TGGGAATCTGAGGGTGCCGGAGGGGTTCATTGTGCCTAAAGAAGAGCCGT
GGCCTAAGGTGAGCAAGCATTTGTGGGCTCTCCGTGCAGCATCTTTTTCA
CTGTCAGTCGTTTCTAGTCATTACGTAGTGATGCTGGCGATGACTTCAAT
CTGACGTATCTCATTAGTGTAAGGTCTGCATCATCTGCTCTACTGGCGCA
CTCTTATGGTTCACGACGGCTCCGGCAAAGCCATTTCATCGCTTATGGTA
TTTCTAGAATTCGTTTCCAAGTTTCTTGCATTGCTCAGCTTTGACACAAT
GAGAGCAATATGCACGATGCATGTGCTTCGCTGAAATGACATCAATTGGC
AGAGAAAAGAATCAGGAGCGAGTGCGGGCCGCCAAGGAAGCGCTCAAGGC
CGACAACTTTACGGCCGCCTGCGCTAAACTCCGCGCCATCTACGGGCAGT
CCCTGCCAGCCGCGCCTAACAGCGGCGGCAAGGGTAACGGCAAGCGCAAG
CACCCCTCCCTCGGCGAGCCGGGGTCTAACCCCAAGCCTGGCCTGCCACT
AACCCGACGCCTTACAACAGCTGGGAGTGCGGCCGCTGCGGCGCCATCGT
CACTACCGGCGAGCGCTCCTGCGGCTCAGCTCAGTGTAGAGATAACAGGC
GCCCTGGCAACGGCCGCAAACGCTGCCGCCAGCGCGACCGGCGCGACGGG
GCCCCTACTACTCCAGCGCCTGCGCCGGCGGTCGCAGTTGCGGCCGTTGC
CGATGCGCCTGTTGTCTCTAAACTCAGCTGAGCTGTGATGGTCGGCGTAG
CGCGCGCCGGCAGTGACGATGACGCCACAGCGGTTGCACTCCCGGTTGTT
GTGAGGAGGATGAGGCAGGCCAGGCTTGGGATAAGGCGCCGGCTCGCCGA
GGAAGGGGTGCTTGCGCTTGCCGTTGCCCATGCCGCCGCCCTGAGGCGCA
TCGCAGGGACTGCCCCTAGATGGCGTGAAGTTGATCGCACGCCGCCTTGG
AGGTGTCGGCCCTGAATCACATCAACGAGTAGCTGCTCTGAGCTGCCTGC
AGCACTTGTTCGCAGCGCCACCGTCGCGGCCATCGCATCGCATTGGCACA
GTGACAAAGCTATACAGCACACAGGCGGGAACTGTCAGGGTTTTGCAATT
GACGTGTGTCCTTCGAGACTGGTTGATATGTTTGGGCAATCAGCAGTAAT
TCTGTAATGCCATCGAATGACTATGTTTCCCTACGTAGAACATTGCTTCC
TAAGGCTTCTGCTGGAACGTGAGCACTGCAGGGCGTGTTACAACTTCAAC
ACCTGCTGCAGTTACTGCAATCTACATGTTCGTCTCACGCACGTTGTGGC
GTGTCACCCGCACTGGAGCGAGCAGGGAGCGTGGGGCTGGCGGCTGGCGC
GGCGGGTGTACTCCATGACTTTCTGGCAGAGGTCAGTTTCGGTACAGCAA
ACGGGTACAGAGAGAGGTACAGAGTACACCATGATATTGCACAGCACAGC
ACACTCTCGACTCAAATGTATGGGGGGGGGGGGGTGTCACAGACCTGCTT
GGTCAAGCACCATAGATGTGCAAATGACCACATTGCATGGTGTAGATCTC
TGTCTGGGACGCTGACATTTGTGCTGCTGTGGAAAGTACTTGCGTTGTCT
TTTGCCCAGAATGTCTGTGGTCTCCATGAACAGAAAGGCGCACACTCGGA
AAAAAAAAAGACTGTCTCTGTCACAGTCACAGACATACAGTTGCATGCGG
GCATTGGCAGTCACATCGGTTACAAATTTGCAAATGCCTTGCGTGTAGAG
GCCTACTTCAACTCGTGGTCACGCCGTATTTGGTGAGTCAGGCATCGGCC
AGAGCAATCTTCAACATGTTGATTTTCATGTACTTATGGGGTACACTATC
TGCTGAACCTCTTTGCAGCGAGATATGCATTATATACGGCGCAAGTGCTG
AACCAGTAACTGGGGTATGCACGAATAGTACCAGCGGTGCCCTGTTGAGC
AACGTCGTGGTGCACACAAGAAGGTAACTGGTCATTGCACAATGGCCTAC
GCTGATAGGTTGCTACCCAGATGCCAAATATGCAGCAAAGTCATGCAGTT
CATCAGTTGCATTCCATCATAGACACGAAGCCGCACTCACTGCAATTTGG
GCGCGGTGGCCATCCACAACTGTGCCGTGCAGCGAAGCCATCACTCCAAG
AACCTCGTCCAGTCAAACTGGCGCGTTCCTCTGTCCGCTGCCCTGTGCAG
CTTTGTGGCGGGCAACGCGAAGCGGCGCGACGCGCTGGAGAAGCTGGGCT
TTGTGTGGGGGCGCCTGCAGCCCAACTACAACCTGCTGCTGGAGGCGCTG
GTCATCTACAAGAGCCTCCACGGGTCGCTGCACGTGCCGCGCAATTTTAT
CGTTCCCGATGAGGAGCCCTGGCCGCAGTCCGTCCGAGGTAGGTGACGCG
CCGATTGGCTTATTGTTGAAGTTGAAGTTGGTGTTCAAAGATGAAGTTCA
ACAACATTGTTGAAGTTTGAATGGTCGCTATCATTTCCAACAGCCTTCAC
AGGTCGCTGCACGTGCCGCGCGACTGTATCGTCTCCGACGAGAAGCCCTT
GCCGCAGTCCGTCCGAGGCAGGTGATGCGCCGACTGGCTAGTTGTTGAAG
ATGAAGTAGCTGTTGTCAGTTACAGGAGCCTCGATGGGTCGCTGCACGTG
CCGCGCAATTTCATCGTTCCCGACGAGGAGCCCTGGCTGCAGTCCGTCCG
AGGTAGGTGACGCGCCATTTTTTGAAGTTGAAGTGGCTAGGCATCTCCAC
ATGCCGCTACGGGTCCCTACATATGTCATGCGACTTCATTGTCCCCAATG
GGGAGCCCTCACTGCAGCCCATTCGAGGAACCTAGGTGATGGTATGATGA
CTAGTGATTGGAGGTTGAACTGGGCCTCAATGGGTTGCTGCACATGCCCG
GGGGGGGGGTGCGTCACAGATGTGGAGCCCTGACCGCAGTCTGTTTGAGG
TAGCTGACGCCCCCCCGACAGCTATTATTCGAACTTGAAGTAGGTAGTGG
GTGAATTTCAAGTGTGCGTAACAGGACGGCTGGAGATGCGTTGACCTACG
CGATAAGTGCAGCGATGATATACATGTGCACATAAGAAGTACATCAATCA
GCTCATCCTGTGTGCAGTCCCTTTGTATAACCATCAGGGAGCGGCATCGC
CAGACAAAGACAACAATCAGCTCGCCCTGCAGGCGCTGCTTTGCACGCCC
CTCAGAAGCCACTTGCGCTGATGTTGCCTTTCAAGCCTTTTAAAAACGAG
TCATTCACATTCGCGTGCGCGCCTCCTGCCGTCCGCCGCCTCCGCACGCT
CACCGCAGACATGCGGCTGGGGCGCGTCGTGACGCGCGTGCGCGTGGACG
GTGTGTACATACAGGGGCGTCCGGACCGCTGGTACCAGCTGCAGGCAAGT
CGCTGCATGAACTACATACTTCAAAGTAGTAAACTTCAAGTGCTCTAGTA
AAAAGTGCGCGTGGACGGCGTGTACAGAATGTCTGTGCAATTTCCGAGTT
GGTGTAAACACAAAAGTATTTCAATCAAATGTCTTTGGAATAGATAGCTT
TTGCGTGCAGCTGCAGAGCACTGCAGCAGTGCTCGTGGGCGTGTGCAATG
TTTGTCTGCGCAGGCTGTGCAGAGTTCAATTGAGCGCAGGTGCTTATGGT
GCTGATTAGTCGTCTCTCTCTCTCTCTCTCCGAGTGCCCACACGCGTTGC
AATTTAGCAAGAGTTGTGTGAAACTGCATTGGCAACAACAGCGCGGTTTC
TGACGATGAGGATGAAGTCGCATCACATGCGCACGAGGCGCTATGCCGTC
AGTGTGTGTATGTGTACATATGAACGCGTGATGGAAGACATTGAACAAAA
CACAGGTGTGCTGCCCATAAATGCCGAGAAGAGATCTTGCAGCAGCACCA
GCTGAGCAATTGCGTGTCTACTGTGCTGATCTTGCTGCTGCTGCTGCTGC
CGCCGCCGCCGCCTCTGCAGGGCATGGGCTTCATTTTTGACCCCTTCCAG
GAGTCCTTCGAGCGCGTGCGTGTGGGTCTAGAGCACTACAGGTTAGCCAC
AAGGGCATCCAAGATTGGTGGAGATGCTTGTTCACCCGGCAAGGGCAGCC
CGCCTCAATACGCGAAGAGTGCCCTGCTTGTCCTTGTGTTTTTTTGTTGA
ATTGAAGTCATTATGGCCGCTCACCTGGGGGTGCTTCGGACCCCGCACGC
CACACCATGTCGCCACGACCGTGACCCAGTGACCGCCTGCTCAGGCGCGC
TCGACGCACTAGCTCAAGTATCTTCAAGCGATGAAGCAATGGGCATAGTG
TTGAAGGTGTGCCTTCATTCATCATTGTGACAGTGCTCGGCATGTTTGTT
ACGCCGCCAAACGTGATTTTTCACTGCGTTCTTCTTCTGCTGTCTGCACC
GCAGCACAGTTCTGCACAAAAGGCCTTTCGCCTAACATTGTTCCTGTCGG
AAATTGGCTGCCTGATGTAGGCTTGACCAGTCCCCCCCCCCCCCCCCCCG
CCCTTCCTCTCATTTGTCTACAAATTACCCTGTTGCTTGCTTGCCTCTCG
CAATGCGCCTGCAAAGCAATGACAGGAGGGTGTCTTACTTGAAGTACTTC
CTACCCTGTGCATGCAGACTACGTGAACCCTTGAATTCGCCTCTCAGAGT
AAGCAGCGCGCCATATAACCGCAGCACATGCCCCGCTCACCCCCTGCCAG
GAACATCACGGGACGCATGGGGCCAGTTCCCGTGCGCTTCCAGGTGCCGC
ACGAACCTCCCTGGCCGACCGCGCTGTGGGGGTTCCAACTCGGCCGCAGG
TGAGCGCTGCTGCTTTCAACTTCAACACTATGTGCCTGTCCAGGGTCCAG
TGACGTTGTGAAAGATACGGTTGGGACACCAGTGAGCAGCGTTGATGACA
AACTCTGCTGTTCGCACGGGCGCAGCTCAAGGATTGTGTAGCGATCCTCG
CGATTTCAGCTTGGGTCCATCACGCTTGATACACAGTGTCATATTGGGCT
CGTGCGTTTGCAGTAATGCATACTTCGGAAAGTAGGTTTGGAGCAGCTTG
TGTCGGGCGCCTGTGTAAGTGGGAGGTGCTGCGGGAGTGGGTGATCCAGA
AACCGCGGCCGTGATCCAGCGGGGTCAATGCCGATTCACCGGGCCATCGC
CGCCCGCCGACACCAACGACCATCATCCTTGCTGTCACGGCAGCGTGGTC
TGGCTTTCACGATCGCTCTCACCTTGCACGACGCCCACCTACGCCTGCCT
GCGCGCGCGTGCCCGGGCCCACAGGCTGCGCGCGGTGCGCGCCGAGCACT
GCCACATCCATCCGTTTGCTGACAATGAGTGACGATAACGTTTTTGCCAC
CGCGACATTGTTTGCTGCAGAGGCGCTGCTTCCGTGCAGATTGTCGCTTC
TGATTACCACAGCCCCCCCCCCCTCCCCCCCCCCCCCCCCCCGCTGGTGT
GTGCGTGTTTTCGCGCTGCAGGCTGCACGCGGTGCGCGCCGAGCACCGCT
ACATCCGCACCAACCCGCTGCGCATCCGCCAGCTCAACGACGCCGCGTTC
CAGTGGCAGTCGCGCGCGGAGGCGGCGTTCGCGCGCCTCGTCCGCGGCAT
TAAGGTGCGCGACGCCGGTGCGAAGCAGTATGGATTTACGTATATTGTGT
ATTCACGGCGTGCTGATCATTGAGATTGAGATGCTCTTGCGTACAACAGA
GGGCATGGCAGGTTTGTGTTTTTTCTTCAGCGTAGCCGCACATCGGACGG
CAAGTGCAACTCGTTCATGTTCGCGCGCCGCGTGCGCGGCGTCAAGGTGC
ACAATGCCGGCGTCGAATGGCGCGCTTCCATGCATATCGTATATTCATGC
CACACGCGCCACCCATTGCGATGGTCATGCATACGTAGGGCATGGCGGAA
TGCCGTTCCAGCACGGCGCACGGCTGAGAGGCAGGTGCAACATTTCCGCG
TTCGCGCGCCGCGTCCGCGGCATCAAGGCGCGCGCGTGAAGCCAGTGTCA
AGCAGTGCACTTCCAAGTATGGGAACGAGTCAGAAGGCTGCAGTGCTCTA
GGTGCCAAGTATATGGTATATCATGGCACACGTGGCAAGTGGTGTACTTC
CAACTGTATCGTATACATGCATGACACACTCGGCGTTGATCGCGCTGGTC
AAGCGCATGTAGGGCATGGCGGGTCGCTGGGTGAGCGGAGCGCTCGGCTG
ACAGCATGTATGATTATACGTCCTTCATGGCGTGCTCTCTGTTGGAGTGC
TTCTGCGCGGGCTGCCGGGACCGCTGCTGCTGGTTCAGCAATGCTCAGCG
CAGGCGCCGGTGATCACTGATCGTGCACCGCACGGCGGCGTTGAACCACT
GCACCTTATCAATGGGCTCATGGACCCTTCTGCTGACCGCAAGAGTGTCT
GCATGCCTTGTCCGAGGCACCTAGGCGCGAGTATGTACTGATGCAAACGT
GTATTGATGCGCACGTGAAGTGCGGTCTCGAACTCGACAGCGCGTTCATG
CGCAAACTTCTTGAGCGAGGCGCAGTTTGTCAGGCTCGTCTTCACCAACT
GTTTGGTACCTGGCGCCCTAGAGGTGTAGACGCTGACAACACTAATCGTG
TGTGCCTGCCGCTGCCTGCTGGCTCTGTTGCCGCAGGCCTACAAGGTCAT
CATGGAGTCGGTGACGATACCCGTCGCTTTTACGGTCAGTGTCTGCATGC
CCAGCACTCAGCATTATGCTTCGGAGACTTTCATTGTACATTAAAGTGTT
TTTGCCTTCTTCACGGCATCACTGCAGCATTGGGGGGCACTCCTGTGACC
GTTCCTGGGCAGTGGATTGTCATTTTCGGCTACAAATCAGAGTCGAAGTC
CGCTGACCTGATCGTCTTGCACCAGTGCCCACGTATAAACGCACTGTTTG
CCAACAGGTCGCTGCTGCAACACCTTTCATGTGCAGCACTCGTTGCTGCA
AAACCGTCTTTGTGCAGCATGCGCCATGCATGCCACTCCGGTTCACCGAC
ATGCAGTTGCATGCATGCACCTGCTTGAGCGCACAATACTGTGATCAGTA
CTTTTCAAAGGTTCGAACACGAGTTCGTGACTGTGTGTGTCAGTTGCAGT
TCTTCTTGAAGTATGTGCCGTCTTGTGCGGCTCGCGTGAAGATGGTAAAT
GTCAGCTATTGACGACTCCCTTGAAACCCTCCAGCGCCGCAAAACTATGC
ACTCTTGGTTCTGTTTGTGCCTGTGATGCGATTCATCACGCCGCCGCACC
CCGCCTGCCCTAGGTTCACGAACGAGTACTACGTCATGTACACATGGAGC
AGGGTAAACGCGCTCGTGCGTTCAGCAAGTCTTCCCTGCTCCGCTGTGCC
CAGGTGCCCCCCGAGGACCCCTGGCCGCAGGAGCTGTGGGGCTTCCGCCT
CGGCACCGCGCTGCGCGACGTGCGCGTCAAGGGCTACTACCTCAACAAGC
CGGCCACGCGCGTGCAGCGCATCGCACAGCTGCAGGCGCTCGGCGTCTGG
CCCGTCACAGCGCTCAACCCGGCTGCAGTGGACGCTGCTGCAGCTGACAG
CGCCGCAGGCTCTGGCCGCGGCAGCAGTGCGGCAGCCGCCGCCGCAATTG
GTGCCGCTGGTGCTGCCGCCAGCAGCGGCGGTGCTGCTGCCAACAGTGCC
ATTGGGACGGGCGCGCTGCAGCTGCGTGAGCGGCAGCACGCCGCCGGCGC
CGCGTCGCCGCAGGAACAGCAGCGGCATGCGCGCCGCGTGTCCTCTGCCA
TGCTGCGGCAGCAGAGCAGCGCCGGCGGCGGCAGCGGCGCTGCGGCCGCC
GTGCTGCAGCAGCGCGGCGCGAGCGGCGCGGCAGCCGTCGCGACCGCCGC
GCTCGAGCACCGCAGCTGCTGCGACGGCGACGCGTGCGCCGGCGTCGGGA
GCCGCGAGCGCGCCATGCATGCGCTGCTGGTGGCGCTGCGCGCGTACCGC
GCGGCGCACGGCGCCGCCGGCCCGCCCGTCTCGTTTGTCGTGCCCGCCGC
CGAGCCGTGGCCGCGCGAGGCGTGGGGGGTGAAGCTGGGGGCGCGGCTGC
GCGACATCCGGCGCGGTCGTGTGCGCGCGGACCGGTACGGCGCGGCGGTG
ACGGCGGAGCTCGAGACGCACCTGGGCGCGCCGCTGCCGGCGCAGGGCAA
GGAGCGCTGA

Coding sequence (CDS) from alignment at Contig_172:86849..96308+

>mRNA_15796 ID=mRNA_15796|Name=jgi.p|Trimin1|353591|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2136bp|location=Sequence derived from alignment at Contig_172:86849..96308+ (Tribonema minus UTEX_B_3156 )
ATGGCGACAGGCGGCGCGGGCCAGGCGTGGGATCAGCGGCGGATGCGGCT
GCTGTGGTGCGCCATTGGCGGCGGCGTGGCGGTGGTGACTGGCGGCAAGC
TGGCGAGCCTGGACGTGCGCTTGCAGCAGGCGGATGCACTGGCAAAGCTG
GGCATCACCGTGCCGCCGCCAGGCAGCGGCTGGGGGCAAGGCGGGGGCGG
CGACGAGGCATCTTTTCAGATGGTGCTGCGGACGCTGAATCTGTACCGCG
AGCGCCATGGGAATCTGAGGGTGCCGGAGGGGTTCATTGTGCCTAAAGAA
GAGCCGTGGCCTAAGGAGCGAGTGCGGGCCGCCAAGGAAGCGCTCAAGGC
CGACAACTTTACGGCCGCCTGCGCTAAACTCCGCGCCATCTACGGGCAGT
CCCTGCCAGCCGCGCCTAACAGCGGCGGCAAGGGTAACGGCAAGCGCAAG
CACCCCTCCCTCGGCGAGCCGGGCGAGCAGGGAGCGTGGGGCTGGCGGCT
GGCGCGGCGGGTGTACTCCATGACTTTCTGGCAGAGCTTTGTGGCGGGCA
ACGCGAAGCGGCGCGACGCGCTGGAGAAGCTGGGCTTTGTGTGGGGGCGC
CTGCAGCCCAACTACAACCTGCTGCTGGAGGCGCTGGTCATCTACAAGAG
CCTCCACGGGTCGCTGCACGTGCCGCGCAATTTTATCGTTCCCGATGAGG
AGCCCTGGCCGCAGTCGCTGCACGTGCCGCGCGACTGTATCGTCTCCGAC
GAGAAGCCCTTGCCGCAGTCCGTCCGAGGCAGGAGCCTCGATGGGTCGCT
GCACGTGCCGCGCAATTTCATCGTTCCCGACGAGGAGCCCTGGCTGCAGT
CCGTCCGAGACATGCGGCTGGGGCGCGTCGTGACGCGCGTGCGCGGCATG
GGCTTCATTTTTGACCCCTTCCAGGAGTCCTTCGAGCGCGTGCGTGTGGG
TCTAGAGCACTACAGGAACATCACGGGACGCATGGGGCCAGTTCCCGTGC
GCTTCCAGGTGCCGCACGAACCTCCCTGGCCGACCGCGCTGTGGGGGTTC
CAACTCGGCCGCAGGCTGCACGCGGTGCGCGCCGAGCACCGCTACATCCG
CACCAACCCGCTGCGCATCCGCCAGCTCAACGACGCCGCGTTCCAGTGGC
AGTCGCGCGCGGAGGCGGCGTTCGCGCGCCTCGTCCGCGGCATTAAGGTG
CGCGACGCCGGTGCGAAGCACCGCACATCGGACGGCAAGTGCAACTCGTT
CATGTTCGCGCGCCGCGTGCGCGGCGTCAAGGCCTACAAGGTCATCATGG
AGTCGGTGACGATACCCGTCGCTTTTACGGTGCCCCCCGAGGACCCCTGG
CCGCAGGAGCTGTGGGGCTTCCGCCTCGGCACCGCGCTGCGCGACGTGCG
CGTCAAGGGCTACTACCTCAACAAGCCGGCCACGCGCGTGCAGCGCATCG
CACAGCTGCAGGCGCTCGGCGTCTGGCCCGTCACAGCGCTCAACCCGGCT
GCAGTGGACGCTGCTGCAGCTGACAGCGCCGCAGGCTCTGGCCGCGGCAG
CAGTGCGGCAGCCGCCGCCGCAATTGGTGCCGCTGGTGCTGCCGCCAGCA
GCGGCGGTGCTGCTGCCAACAGTGCCATTGGGACGGGCGCGCTGCAGCTG
CGTGAGCGGCAGCACGCCGCCGGCGCCGCGTCGCCGCAGGAACAGCAGCG
GCATGCGCGCCGCGTGTCCTCTGCCATGCTGCGGCAGCAGAGCAGCGCCG
GCGGCGGCAGCGGCGCTGCGGCCGCCGTGCTGCAGCAGCGCGGCGCGAGC
GGCGCGGCAGCCGTCGCGACCGCCGCGCTCGAGCACCGCAGCTGCTGCGA
CGGCGACGCGTGCGCCGGCGTCGGGAGCCGCGAGCGCGCCATGCATGCGC
TGCTGGTGGCGCTGCGCGCGTACCGCGCGGCGCACGGCGCCGCCGGCCCG
CCCGTCTCGTTTGTCGTGCCCGCCGCCGAGCCGTGGCCGCGCGAGGCGTG
GGGGGTGAAGCTGGGGGCGCGGCTGCGCGACATCCGGCGCGGTCGTGTGC
GCGCGGACCGGTACGGCGCGGCGGTGACGGCGGAGCTCGAGACGCACCTG
GGCGCGCCGCTGCCGGCGCAGGGCAAGGAGCGCTGA