Trimin1|353588|estExt_Genemark1.C_Ctg_1720009 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353588
Unique NameTrimin1|353588|estExt_Genemark1.C_Ctg_1720009
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length273
Homology
BLAST of jgi.p|Trimin1|353588 vs. uniprot
Match: A0A836CJP2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP2_9STRA)

HSP 1 Score: 520 bits (1340), Expect = 3.060e-186
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
Query:    1 MTSHFDWCPDFELAEADAEQQRHVFDELQRRDDWLLAKRPWLLPGPNLWSAELAAAATEAANLAAEREAMALVLSDISPSISTGVRTLSFILDVMGTRLLEVTEAADSEGVARPSGMLSVFVTTGSAAVETPERLGSALRCGIDTLALANSCAAQEAAGASGSVQVVQRLQQLSMRVSHQAMRGAIRARRTNLLFELPALAAERSLPLTLDAWAQAASAVIGAGRDVAQQKALLIWLSQRVRPWPVWWRTFLCYAAAEAGHLAILQYLMHDD 272
            MTSHFDWCPDFELAEADAEQQRHVFDELQRRDDWLLAKRPWLLPGPNLWSAELAAAATEAANLAAEREAMALVLSDISPSISTGVRTLSFILDVMGTRLLEVTEAADSEGVARPSGMLSVFVTTGSAAVETPERLGSALRCGIDTLALANSCAAQEAAGASGSVQVVQRLQQLSMRVSHQAMRGAIRARRTNLLFELPALAAERSLPLTLDAWAQAASAVIGAGRDVAQQKALLIWLSQRVRPWPVWWRTFLCYAAAEAGHLAILQYLMHDD
Sbjct:    1 MTSHFDWCPDFELAEADAEQQRHVFDELQRRDDWLLAKRPWLLPGPNLWSAELAAAATEAANLAAEREAMALVLSDISPSISTGVRTLSFILDVMGTRLLEVTEAADSEGVARPSGMLSVFVTTGSAAVETPERLGSALRCGIDTLALANSCAAQEAAGASGSVQVVQRLQQLSMRVSHQAMRGAIRARRTNLLFELPALAAERSLPLTLDAWAQAASAVIGAGRDVAQQKALLIWLSQRVRPWPVWWRTFLCYAAAEAGHLAILQYLMHDD 272          
BLAST of jgi.p|Trimin1|353588 vs. uniprot
Match: A0A835ZEP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP5_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.860e-53
Identity = 116/220 (52.73%), Postives = 138/220 (62.73%), Query Frame = 0
Query:   63 LAAEREAMALVLSDISPSISTGVRTLSFILDVMGTRLLEVTEAADS------EGVARPSGMLSVFVTTGSAAVETPERLGSALRCGIDTLALANSCAAQEAAGASGSVQVVQRLQQLSMRVSH----QAMRGAIRARRTNLLFELPALAAERSLPLTLDAWAQAASAVIGAGRDVAQQKALLIWLSQRVRPWPVWWRTFLCYAAAEAGHLAILQYLMHDD 272
            LAAEREAM LVLSDISPS   GV  L++ L+ MG RLLE+   A S         AR  G   V VT+GSA VETP RL  AL  G D  AL  SC  Q AAG SGS++V+ RL+QL M VS     Q + GA RARRT +L+ LPALA E    +    W  A   V+ +  D  +QKA+LIWLSQ+VRPWPVW+ T LC+ AAE G LA L++LMH D
Sbjct:    3 LAAEREAMLLVLSDISPSSKDGVTILAYTLEAMGARLLELVPVARSWRTAYMSVTARQQGAAWVCVTSGSAVVETPARLEMALARGADVPALVKSCDVQRAAGTSGSMEVIHRLRQLGMVVSDGVVLQVLIGATRARRTGVLYRLPALALESGEQVDHQTWTYAGICVLRSAYDEEEQKAVLIWLSQQVRPWPVWYCTRLCHIAAENGRLAALKFLMHKD 222          
BLAST of jgi.p|Trimin1|353588 vs. uniprot
Match: A0A835YZ94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ94_9STRA)

HSP 1 Score: 173 bits (439), Expect = 3.060e-47
Identity = 118/270 (43.70%), Postives = 142/270 (52.59%), Query Frame = 0
Query:   63 LAAEREAMALVLSDISPSISTGVRTLSFILDVMGTRLLEVTEAADSEGV--------------------------------------------------------ARPSGMLSVFVTTGSAAVETPERLGSALRCGIDTLALANSCAAQEAAGASGSVQVVQRLQQLSMRVSH----QAMRGAIRARRTNLLFELPALAAERSLPLTLDAWAQAASAVIGAGRDVAQQKALLIWLSQRVRPWPVWWRTFLCYAAAEAGHLAILQYLMHDD 272
            LAAEREAM LVLSDISPS + GV  L++ L+ MG RLLEVTEA +S+                                                          AR  G   V VT+GSA VETP RL  AL  G D  AL  SC  Q AAG SGS++V+ RL+QL M VS     Q + GA  ARRT +L+ LPALA E    +    W  A   V+ +  D  +QKA+LIWLSQ+VRPWPVW+ T LC+ AAE G LA L++LMH D
Sbjct:    3 LAAEREAMLLVLSDISPSSNGGVTILAYTLEAMGARLLEVTEATESDDARACAPSRSEVVGDGPRRAVLANPQLLESVLSFVGRGHRLYLVPVARSWRTAYMSVTARQQGAAWVCVTSGSAVVETPARLEMALARGADVPALVKSCDVQRAAGTSGSMEVIHRLRQLGMVVSDGVVLQVLIGATCARRTGVLYRLPALALESGEQVDHQTWTYAGICVLRSAYDEEEQKAVLIWLSQQVRPWPVWYCTCLCHTAAENGRLASLKFLMHKD 272          
BLAST of jgi.p|Trimin1|353588 vs. uniprot
Match: A0A835ZI44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI44_9STRA)

HSP 1 Score: 154 bits (389), Expect = 5.140e-40
Identity = 110/270 (40.74%), Postives = 138/270 (51.11%), Query Frame = 0
Query:   59 EAANLAAEREAMALVLSDISPSISTGVRTLSFILDVMGTRLLEVTEAADSEGV--------------------------------------------------------ARPSGMLSVFVTTGSAAVETPERLGSALRCGIDTLALANSCAAQEAAGASGSVQVVQRLQQLSMRVSHQAMRGAIRARRTNLLFELPALAAERSLPLTLDAWAQAASAVIGAGRDVAQQKALLIWLSQRVRPWPVWWRTFLCYAAAEAGHLAILQYLMHDD 272
            EAA+LAAEREAM LVL DI PS  +GVR+L+  +  MGTRL EV EA  S+                                                          A+  G  SV VT G+AAVE PERL  AL CGI+   L  +   Q AAGASGS++VV+RL  L M +S  A+ GA  ARRT ++  L ALA      +TL  W            D  +Q+A LIWLSQ++RPWPVW+ T LC+ AAE G LA L++L+H+D
Sbjct:    2 EAAHLAAEREAMLLVLGDICPSADSGVRSLTCTVQAMGTRLQEVMEAVSSDDARANAGSPSEAEGDGPRGAVLANPQLLASIINFMKCGHWLYLTPVARSWRTAYMSVTAQREGAPSVCVTWGTAAVEAPERLAMALACGINVQRLTRAYFVQNAAGASGSMEVVRRLHGLGMPISDGALIGA--ARRTGVMNRLLALALGSGEQVTLSTWLFVGLCTFSDAYD-GEQRAALIWLSQQMRPWPVWFCTVLCHTAAEKGQLAALKFLIHED 268          
BLAST of jgi.p|Trimin1|353588 vs. uniprot
Match: A0A836CDJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ7_9STRA)

HSP 1 Score: 139 bits (349), Expect = 5.590e-35
Identity = 80/161 (49.69%), Postives = 103/161 (63.98%), Query Frame = 0
Query:  112 ARPSGMLSVFVTTGSAAVETPERLGSALRCGIDTLALANSCAAQEAAGASGSVQVVQRLQQLSMRVSHQAMRGAIRARRTNLLFELPALAAERSLPLTLDAWAQAASAVIGAGRDVAQQKALLIWLSQRVRPWPVWWRTFLCYAAAEAGHLAILQYLMHDD 272
            AR  G+  V VT+GSAAVETPER   AL CGI   AL NS  AQ AAGASGS++V++ L +L +  S   +  A RARRT +L+  P LA ER++ + +  W       +    +  QQ+A LIWLSQ+VRP PVW+ + LC  AAE G LA L++LMHDD
Sbjct:    5 ARQQGVPWVCVTSGSAAVETPERQEMALACGISVPALTNSSDAQCAAGASGSMEVIRHLHRLGVPTSDAVLFSAARARRTGILYRFPVLARERNVQVKMSTWMAVYERFLSDSYNDEQQRAALIWLSQQVRPLPVWYCSSLCVTAAENGQLAALKFLMHDD 165          
BLAST of jgi.p|Trimin1|353588 vs. uniprot
Match: A0A836CP87_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP87_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.380e-34
Identity = 80/164 (48.78%), Postives = 108/164 (65.85%), Query Frame = 0
Query:  111 VARPSGMLSVFVTTGSAAVETPERLGSALRCGIDTL--ALANSCAAQEAAGASGSVQVVQRLQQLSMRVSHQAMRGAIRARRTNLLFELPALAAERSLPLTLDAWAQAASAVIGAGRDVAQQKALLIWLSQRVRPWPVWWRTFLCYAAAEAGHLAILQYLMHDD 272
            +A+  G+  V  T+  AAVE+P+RL  AL CGI     +L  SC   +AAGASGS++VV+RL  L +RVS   +  A RARRT +L+ LPAL  E    +TL  W    ++++GA  D  + KA+L+WLSQ+VRPWPVW+ T LC+ AA  G LA L++LMHDD
Sbjct:   24 MAQQEGVPWVCATSPPAAVESPQRLEMALACGITVHVPSLHYSCNVFDAAGASGSMEVVRRLHGLGLRVSC-VLPSAARARRTGILYRLPALVQESGDEVTLHTWVLVQASILGAAYDDNELKAVLVWLSQQVRPWPVWYCTLLCHTAARKGRLAALKFLMHDD 186          
BLAST of jgi.p|Trimin1|353588 vs. uniprot
Match: A0A835YUZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ6_9STRA)

HSP 1 Score: 128 bits (321), Expect = 8.580e-31
Identity = 75/160 (46.88%), Postives = 99/160 (61.88%), Query Frame = 0
Query:  113 RPSGMLSVFVTTGSAAVETPERLGSALRCGIDTLALANSCAAQEAAGASGSVQVVQRLQQLSMRVSHQAMRGAIRARRTNLLFELPALAAERSLPLTLDAWAQAASAVIGAGRDVAQQKALLIWLSQRVRPWPVWWRTFLCYAAAEAGHLAILQYLMHDD 272
            R   +  V VT G AAVETPERL  AL  GID   L ++ +AQEAAGASGS++V+ RL  L M +S  A+ GA  AR    L+ L  LA  R++ + L+ W      VI    D  Q+ A L+WLS++VRPWPVW+ T+LC++AA  G  A L+Y M+ D
Sbjct:  132 RQQSVPCVCVTVGPAAVETPERLEMALEHGIDVPILTSTYSAQEAAGASGSMEVILRLCHLGMPISCAALLGAACARHIGTLYRLCTLAQRRNVLVRLETWTALHERVIHCSHDDEQRLAALVWLSRQVRPWPVWFCTYLCHSAANGGRQAALKYFMNKD 291          
BLAST of jgi.p|Trimin1|353588 vs. uniprot
Match: A0A835YNS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNS1_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.320e-22
Identity = 66/161 (40.99%), Postives = 85/161 (52.80%), Query Frame = 0
Query:  112 ARPSGMLSVFVTTGSAAVETPERLGSALRCGIDTLALANSCAAQEAAGASGSVQVVQRLQQLSMRVSHQAMRGAIRARRTNLLFELPALAAERSLPLTLDAWAQAASAVIGAGRDVAQQKALLIWLSQRVRPWPVWWRTFLCYAAAEAGHLAILQYLMHDD 272
            AR  G+  V VT  +A  E P RL   L CG+   A   S   +EAAGASGS +V++R++QL M  +                     +AAE    +TL  W      ++    D AQQ+A LIWLSQ  RPWPVW+ T LC+ AAE G LA L++LM DD
Sbjct:   77 ARRQGVPWVCVTAAAAVAEAPARLEMGLACGVRLPARGGSFDVEEAAGASGSTEVIRRMRQLGMSAA--------------------GVAAECGEHMTLQTWIDLVPHILCDAYDGAQQEAALIWLSQHARPWPVWYCTHLCFTAAENGQLAALKFLMRDD 217          
BLAST of jgi.p|Trimin1|353588 vs. uniprot
Match: A0A836CD13_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD13_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 3.370e-13
Identity = 56/112 (50.00%), Postives = 69/112 (61.61%), Query Frame = 0
Query:   95 MGTRLLEVTEAADSEGVARPSGMLSVFVTTGSAAVETPERLGSALRCGIDTLALANSCAAQEAAGASGSVQVVQRLQQLSMRVSHQAMRGAIRARRTNLLFELPALAAERSL 206
            MG+RL EVTEAA+ +   +P  +L           ETPERL  AL CGI   AL  S +AQ AAGASGS++V+QRL Q  M +S+  + GA  ARRT  L+ LPALA E  L
Sbjct:    1 MGSRLAEVTEAANIDH--KPETVL-----------ETPERLEMALACGISVPAL-TSYSAQHAAGASGSMEVIQRLLQRGMPISNAVLVGAASARRTGTLYRLPALALEHGL 98          
BLAST of jgi.p|Trimin1|353588 vs. uniprot
Match: A0A835YM44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM44_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.970e-11
Identity = 51/129 (39.53%), Postives = 76/129 (58.91%), Query Frame = 0
Query:  112 ARPSGMLSVFVTTGSAAVETPERLGSALRCGIDTLALANSCAAQEAAGASGSVQVVQRLQQLSMRVSHQAMRGAIRARRTNLLFELPALAAERSLPLTLDAWAQAASAVIGAGRDVAQQKALLIWLSQR 240
            AR  G+  V VT+  AA E+  RL +AL CG++   L  + A   A GASGS++V++R QQL +      + GAI AR T++L+ +P LA E    +T   WA+ A+ +     D  ++KA L+WLSQ+
Sbjct:   66 ARRQGVPWVCVTSVPAAAESLARLETALACGLEA-PLFFADAVPAAIGASGSLEVIRRAQQLRLMSLSNVVTGAIGARHTDILYMVPTLALEGGTQVTFLMWARLAAHLFCTAADDDKRKAALVWLSQQ 193          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353588 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A836CJP2_9STRA3.060e-186100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEP5_9STRA1.860e-5352.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZ94_9STRA3.060e-4743.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZI44_9STRA5.140e-4040.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDJ7_9STRA5.590e-3549.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CP87_9STRA1.380e-3448.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YUZ6_9STRA8.580e-3146.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNS1_9STRA1.320e-2240.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CD13_9STRA3.370e-1350.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YM44_9STRA1.970e-1139.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_172contigContig_172:61863..62969 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353588mRNA_15793Tribonema minus UTEX_B_3156 mRNAContig_172 61826..63144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353588|estExt_Genemark1.C_Ctg_1720009 ID=Trimin1|353588|estExt_Genemark1.C_Ctg_1720009|Name=jgi.p|Trimin1|353588|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=273bp
MTSHFDWCPDFELAEADAEQQRHVFDELQRRDDWLLAKRPWLLPGPNLWS
AELAAAATEAANLAAEREAMALVLSDISPSISTGVRTLSFILDVMGTRLL
EVTEAADSEGVARPSGMLSVFVTTGSAAVETPERLGSALRCGIDTLALAN
SCAAQEAAGASGSVQVVQRLQQLSMRVSHQAMRGAIRARRTNLLFELPAL
AAERSLPLTLDAWAQAASAVIGAGRDVAQQKALLIWLSQRVRPWPVWWRT
FLCYAAAEAGHLAILQYLMHDD*
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