Trimin1|353571|estExt_Genemark1.C_Ctg_1710025 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353571
Unique NameTrimin1|353571|estExt_Genemark1.C_Ctg_1710025
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length496
Homology
BLAST of jgi.p|Trimin1|353571 vs. uniprot
Match: A0A836CLK2_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK2_9STRA)

HSP 1 Score: 984 bits (2543), Expect = 0.000e+0
Identity = 495/495 (100.00%), Postives = 495/495 (100.00%), Query Frame = 0
Query:    1 MALGRSEHVYAETACSAHNSSAVTPSGSNGEGYRPPQPRDLDAVSSLPPDLVPRALTPEERGALHAAFARPDTQPVVSIDGNSVSADRFFAGLRPGGWLNDEVINCWLATLRLRFPRTVFANTQFYANLMAGYPSIRAGVCYCFKHVVKWCEGRSGEKSGLARLWRDPTVSKFVVPVHMSGNHWVLVAADFNTHTVTEYDSLGAGEAEGGGGEDGAGMEDENGASLSRSYHVLMFLEDLSFWTAGDDSAQLPHWWELASAPEAPRHPDTCSCGVFAAFAAAAVAAAPRGASPDFLSYSIPHARGQEWRRAQACRAALMRETIARVLVSDSSREEERKAALAAQATARTTTLGDPPDSGHARMSYAINSSISSSSIKLDVRLAAPFSRGTVVKHLADRLGCEAWFHQGKSRGFLLGGSNDAVPTVSGSADKLLELLSALLSSGPAGFSQDMRMSLRVTNMSPSMLCRLLNLVPGAVAAGQGAVSHSAQQTLSHFNI 495
            MALGRSEHVYAETACSAHNSSAVTPSGSNGEGYRPPQPRDLDAVSSLPPDLVPRALTPEERGALHAAFARPDTQPVVSIDGNSVSADRFFAGLRPGGWLNDEVINCWLATLRLRFPRTVFANTQFYANLMAGYPSIRAGVCYCFKHVVKWCEGRSGEKSGLARLWRDPTVSKFVVPVHMSGNHWVLVAADFNTHTVTEYDSLGAGEAEGGGGEDGAGMEDENGASLSRSYHVLMFLEDLSFWTAGDDSAQLPHWWELASAPEAPRHPDTCSCGVFAAFAAAAVAAAPRGASPDFLSYSIPHARGQEWRRAQACRAALMRETIARVLVSDSSREEERKAALAAQATARTTTLGDPPDSGHARMSYAINSSISSSSIKLDVRLAAPFSRGTVVKHLADRLGCEAWFHQGKSRGFLLGGSNDAVPTVSGSADKLLELLSALLSSGPAGFSQDMRMSLRVTNMSPSMLCRLLNLVPGAVAAGQGAVSHSAQQTLSHFNI
Sbjct:    1 MALGRSEHVYAETACSAHNSSAVTPSGSNGEGYRPPQPRDLDAVSSLPPDLVPRALTPEERGALHAAFARPDTQPVVSIDGNSVSADRFFAGLRPGGWLNDEVINCWLATLRLRFPRTVFANTQFYANLMAGYPSIRAGVCYCFKHVVKWCEGRSGEKSGLARLWRDPTVSKFVVPVHMSGNHWVLVAADFNTHTVTEYDSLGAGEAEGGGGEDGAGMEDENGASLSRSYHVLMFLEDLSFWTAGDDSAQLPHWWELASAPEAPRHPDTCSCGVFAAFAAAAVAAAPRGASPDFLSYSIPHARGQEWRRAQACRAALMRETIARVLVSDSSREEERKAALAAQATARTTTLGDPPDSGHARMSYAINSSISSSSIKLDVRLAAPFSRGTVVKHLADRLGCEAWFHQGKSRGFLLGGSNDAVPTVSGSADKLLELLSALLSSGPAGFSQDMRMSLRVTNMSPSMLCRLLNLVPGAVAAGQGAVSHSAQQTLSHFNI 495          
BLAST of jgi.p|Trimin1|353571 vs. uniprot
Match: A0A835Z1W2_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1W2_9STRA)

HSP 1 Score: 362 bits (929), Expect = 2.940e-115
Identity = 209/350 (59.71%), Postives = 236/350 (67.43%), Query Frame = 0
Query:   12 ETACSAHNSSAVTPSGSNGEGYRPPQPRDLDAVSSLPPDLVPRALTPEERGALHAAFARPDTQ-PVVSIDGNSVSADRFFAGLRPGGWLNDEVINCWLATLRLRFPRTVFANTQFYANLMAGYPSIRAG--VCYCFKHVVKWCEGRSGEKSGLARLWRDPTVSKFVVPVHMSGNHWVLVAADFNTHTVTEYDSLGAGEAEGGGGEDGAGMEDENGASLSRSYHVLMFLEDLSFWTAGDDSAQLPHWWELA--SAPEAPRHPDTCSCGVFAAFAAAAVAAAPRGASPDFLSYSIPHARGQEWRRAQACRAALMRETIARVLVSDSSREE-ERKAALAAQATARTTTLGDPP 355
            +TA  AH+S AV             QP+D D + SLPPDL+PR LTPEERGAL A FA+ DT  P  S+ G  VS  R F+ LRPGGWLNDEV+NCWLATLR RFP TVFANTQFY  LMAG P I  G  V Y FK+V KWCEGR GE+SGLARLWRDP V++FVVPVH  GNHWVLVAAD NTH V+EYDS+G GEA+GGG E+G       GA   +                 D +A  P  W +   +  EAPR PD CSCGVFAAFAAAAVAAAP+GA PDFLSYSIPHA+G  WR AQ  RAALMRET+ARVL+++SSREE ER A     ATA    LG  P
Sbjct:    6 QTAGRAHDSVAVP--------LAKMQPQDPDPIGSLPPDLLPRRLTPEERGALDAIFAQEDTDAPAASVGGTPVSG-RSFSRLRPGGWLNDEVLNCWLATLRPRFPGTVFANTQFYTTLMAGIPHIPMGLGVGYHFKNVEKWCEGRRGEESGLARLWRDPAVTRFVVPVHARGNHWVLVAADLNTHVVSEYDSMGTGEAQGGGVEEG-------GAERIKE----------------DRTALPPGRWGVGRVTVSEAPRQPDACSCGVFAAFAAAAVAAAPQGAPPDFLSYSIPHAQGPAWRSAQTLRAALMRETVARVLLAESSREEAERTAEQTELATAAEVLLGMAP 323          
BLAST of jgi.p|Trimin1|353571 vs. uniprot
Match: A0A836CJQ5_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ5_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.310e-42
Identity = 93/140 (66.43%), Postives = 103/140 (73.57%), Query Frame = 0
Query:  347 RTTTLGDPPDSGHARMSYAINSSISSSSIKLDVRLAAPFSRGTVVKHLADRLGCEAWFHQGKSRGFLLGGSNDAVPTVSGSADKLLELLSALLSSGPAGFSQDMRMSLRVTNMSPSMLCRLLNLVPGAVAAGQGAVSHSA 486
            RTTTLG+PPD GHAR SYA  SSISSS IKLDVRL  P  RG VV+ LA++LGCEAWFH+  S GF+ GGSNDAVPTVSG ADKLLELLSAL  SGPAGF+QDMR SLRVTN+    L R L+   G V    G  +  A
Sbjct:  190 RTTTLGNPPDEGHARTSYACKSSISSSGIKLDVRLVTPIFRGAVVRDLAEKLGCEAWFHKSTSLGFMPGGSNDAVPTVSGCADKLLELLSALPPSGPAGFAQDMRTSLRVTNLRS--LGRELHRGEGEVLCNTGYANQPA 327          
BLAST of jgi.p|Trimin1|353571 vs. uniprot
Match: A0A7S2NR69_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NR69_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 1.720e-10
Identity = 60/205 (29.27%), Postives = 81/205 (39.51%), Query Frame = 0
Query:   93 LRPGGWLNDEVINCWLATLRLR------------------FPRTVFANTQFYANLMAGYPSIRAGVCYCFKHVVKWCEGRSGEKSGLARLWRDPTVSKFVVPVHMSGNHWVLVAADFNTHTVTEYDSLGAGEAEGGGGEDGAGMEDENGASLSRSYHVLMFLEDLSFWTAGDDSAQLPH----WWELASAPEAPRHPDTCSCGVF 275
            LRPG WLNDEVIN +   L +R                   PR  F  T FY  L  G      G  Y +K V +W +           +++   V   +VP+H  GNHW L   +F       YDSL  GE                G  L+   H+  +L D S     +D  Q+P+    W ++A   + PR  +   CGVF
Sbjct:   14 LRPGCWLNDEVINLFFKLLDVREKDAVAAKAAGLTDAFTQAPRCHFCQTNFYTKLSGG------GGSYDYKSVKRWTKKID--------IFQKELV---IVPIHCHGNHWTLAVINFKLKRFEYYDSLFGGE----------------GMILT---HLRRWLTDES-----NDKKQVPYDTSDWTDIAFKKDMPRQKNGSDCGVF 177          
BLAST of jgi.p|Trimin1|353571 vs. uniprot
Match: A0A0A9MLB5_ARUDO (ULP_PROTEASE domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9MLB5_ARUDO)

HSP 1 Score: 70.9 bits (172), Expect = 1.670e-9
Identity = 56/160 (35.00%), Postives = 75/160 (46.88%), Query Frame = 0
Query:   54 RALTPEERGALHAAF--ARPDTQPVVSIDGNSVSADRF-FAGLRPGGWLNDEVINCWLATLRLR-------FPRTVFANTQFYANLMAGYPSIRAGVCYCFKHVVKWCEGRSGEKSGLARLWRDPTVSKFVVPVHMSGNHWVLVAADFNTHTVTEYDSLG 203
            + LT EE  A+H     + P ++ +V  + +++   +  F  LRPGGWLNDEVIN +L  L+ R       F +  F NT FY  L  G    + G  Y +K V +W   R   K G   +  D    K  VPVH    HW L   +   HT    DSLG
Sbjct:  180 KPLTDEEENAVHDCLYSSGPSSKVLVLHESSNIEVTKEKFRCLRPGGWLNDEVINLYLELLKEREKREPKKFLKCHFFNTFFYKKLACG----KLG--YDYKSVKRWTTHR---KLGYELIECD----KIFVPVHKD-IHWCLAVINMKEHTFQYLDSLG 325          
BLAST of jgi.p|Trimin1|353571 vs. uniprot
Match: A0A5J9WFX6_9POAL (ULP_PROTEASE domain-containing protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9WFX6_9POAL)

HSP 1 Score: 68.9 bits (167), Expect = 7.060e-9
Identity = 59/175 (33.71%), Postives = 78/175 (44.57%), Query Frame = 0
Query:   39 RDLDAVSSLPPDLVPRALTPEERGALH-AAFAR-PDTQPVVSIDGNSVSADRF-FAGLRPGGWLNDEVINCWLATLR-------LRFPRTVFANTQFYANLMAGYPSIRAGVCYCFKHVVKWCEGRSGEKSGLARLWRDPTVSKFVVPVHMSGNHWVLVAADFNTHTVTEYDSLG 203
            R LD         + + LT EE   +H   F R P ++ +VS + +++   +  F  LRPGGWLNDEVIN +L  L+        RF +  F NT FY  L  G         Y +K V +W   R   K G   +  D    K  VPVH    HW L   +   +T    DSLG
Sbjct:  165 RKLDQAPKEDLSELFKPLTDEEEDEVHDCLFGRGPSSKVLVSHESSNIEISKEKFRCLRPGGWLNDEVINLYLELLKEREKREPKRFLKCHFFNTFFYKKLACGKNG------YDYKSVKRWTTQR---KLGYELIDCD----KIFVPVHKD-IHWCLAIINMKKNTFQYLDSLG 325          
BLAST of jgi.p|Trimin1|353571 vs. uniprot
Match: A0A444ZG34_ARAHY (ULP_PROTEASE domain-containing protein n=13 Tax=Arachis TaxID=3817 RepID=A0A444ZG34_ARAHY)

HSP 1 Score: 69.3 bits (168), Expect = 7.390e-9
Identity = 72/252 (28.57%), Postives = 107/252 (42.46%), Query Frame = 0
Query:   32 GYRPPQPRDLDAVSSLPPDLVPRALTPEERGALHAAFARPDTQPVVSIDGNSVS-ADRFFAGLRPGGWLNDEVINCWLATLR-------LRFPRTVFANTQFYANLMAGYPSIRAGVCYCFKHVVKWCEGRSGEKSGLARLWRDPTVSKFVVPVHMSGNHWVLVAADFNTHTVTEYDSLGAGEAEGGGGEDGAGMEDENGASLSRSYHVLMFLEDLSFWTAGDDSAQLPHWWELASAPEAPRHPDTCSCGVF 275
            G+   +P+  + V  +P +    ALT EE   + +AF     + +V+ D +++  +   F  LRPG WLNDEVIN +L  L+        RF +  F NT FY  L++G    R+G  Y FK V +W   R   K G   +  D    K  VP+H    HW L   +         DSL              GM+++    L+R Y     ++++   T  D        WE     + P   +   CGVF
Sbjct:  286 GFELLRPKKAEPVEEVPREPF-LALTEEEEDEVASAFLANRRKILVTHDESNIEISGEKFQCLRPGAWLNDEVINLYLELLKEREKRDPQRFLKCHFFNTFFYKKLISG----RSG--YDFKSVRRWTSQR---KLGYGLIECD----KIFVPIHKE-IHWCLAIINKKDQKFQYLDSL-------------KGMDNQVLKVLARYY-----VDEVKDKTGKDLDVSS---WEKEFVEDLPEQENGYDCGVF 501          
BLAST of jgi.p|Trimin1|353571 vs. uniprot
Match: A0A444ZG71_ARAHY (ULP_PROTEASE domain-containing protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A444ZG71_ARAHY)

HSP 1 Score: 67.8 bits (164), Expect = 1.780e-8
Identity = 58/179 (32.40%), Postives = 83/179 (46.37%), Query Frame = 0
Query:   32 GYRPPQPRDLDAVSSLPPDLVPRALTPEERGALHAAFARPDTQPVVSIDGNSVS-ADRFFAGLRPGGWLNDEVINCWLATLR-------LRFPRTVFANTQFYANLMAGYPSIRAGVCYCFKHVVKWCEGRSGEKSGLARLWRDPTVSKFVVPVHMSGNHWVLVAADFNTHTVTEYDSL 202
            G+   +P+  + V  +P +    ALT EE   + +AF     + +V+ D +++  +   F  LRPG WLNDEVIN +L  L+        RF +  F NT FY  L++G    R+G  Y FK V +W   R   K G   +  D    K  VP+H    HW L   +         DSL
Sbjct:  243 GFELLRPKKAEPVEEVPREPF-LALTEEEEDEVASAFLANRRKILVTHDESNIEISGEKFQCLRPGAWLNDEVINLYLELLKEREKRDPQRFLKCHFFNTFFYKKLISG----RSG--YDFKSVRRWTSQR---KLGYGLIECD----KIFVPIHKE-IHWCLAIINKKDQKFQYLDSL 406          
BLAST of jgi.p|Trimin1|353571 vs. uniprot
Match: A0A2E4IZM5_9BACT (ULP_PROTEASE domain-containing protein n=1 Tax=Opitutaceae bacterium TaxID=2006848 RepID=A0A2E4IZM5_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 1.460e-7
Identity = 57/181 (31.49%), Postives = 80/181 (44.20%), Query Frame = 0
Query:   95 PGGWLNDEVINCWLATLRLRFPRTVFANTQFYANLMAGYPSIRAGVCYCFKHVVKWCEGRSGEKSGLARLWRDPTVSKFVVPVHMSGNHWVLVAADFNTHTVTEYDSLGAGEAEGGGGEDGAGMEDENGASLSRSYHVLMFLEDLSFWTAGDDSAQLPHWWELASAPEAPRHPDTCSCGVF 275
            P  WLNDE+IN +LA +  R  + VF +T F A L            Y +++V +W +     K G   L RD    K  +PV+ + +HWVLV  D    TV+ YDSLG               +DE         +V+ +LED+S    G  + +    W      E PR  +   CGVF
Sbjct:  117 PKTWLNDEIINFYLALVAER-TKKVFFSTYFIAKLYKD----NKDEYYMYENVKRWTD-----KLGYDILERD----KIFIPVNQNRDHWVLVIVDLPNTTVSYYDSLGE--------------KDETCTG-----NVVRWLEDVS---EGRGNKRDEGRWRKEYVSE-PRQDNCYDCGVF 260          
BLAST of jgi.p|Trimin1|353571 vs. uniprot
Match: A0A833QNP1_9POAL (Putative ubiquitin-like-specific protease 1B isoform X2 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QNP1_9POAL)

HSP 1 Score: 64.3 bits (155), Expect = 2.010e-7
Identity = 48/153 (31.37%), Postives = 71/153 (46.41%), Query Frame = 0
Query:   59 EERGALHAAFARPDTQPVVSIDGNSVSADR-FFAGLRPGGWLNDEVINCWLATLRLR-------FPRTVFANTQFYANLMAGYPSIRAGVCYCFKHVVKWCEGRSGEKSGLARLWRDPTVSKFVVPVHMSGNHWVLVAADFNTHTVTEYDSLG 203
            +E    +A F R     +V+ + +++   +     LRPGGWLNDEVIN +L  L+ R       F +  F NT FY  L+ G         Y +K V +W    + +K G + +  D    K  VP+H  G HW L   +    ++   DSLG
Sbjct:  173 DEEEVDNALFGRDSHTILVTHESSNIEITKEIIRCLRPGGWLNDEVINLYLELLKERERRQPDRFLKCHFFNTFFYKKLIGGNDG------YDYKAVRRWT---TQKKLGYSLINCD----KIFVPIH-KGTHWCLAVINVKQKSLQYLDSLG 311          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353571 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CLK2_9STRA0.000e+0100.00ULP_PROTEASE domain-containing protein n=1 Tax=Tri... [more]
A0A835Z1W2_9STRA2.940e-11559.71ULP_PROTEASE domain-containing protein n=1 Tax=Tri... [more]
A0A836CJQ5_9STRA1.310e-4266.43BTB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2NR69_9EUKA1.720e-1029.27Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A0A9MLB5_ARUDO1.670e-935.00ULP_PROTEASE domain-containing protein n=1 Tax=Aru... [more]
A0A5J9WFX6_9POAL7.060e-933.71ULP_PROTEASE domain-containing protein n=1 Tax=Era... [more]
A0A444ZG34_ARAHY7.390e-928.57ULP_PROTEASE domain-containing protein n=13 Tax=Ar... [more]
A0A444ZG71_ARAHY1.780e-832.40ULP_PROTEASE domain-containing protein n=1 Tax=Ara... [more]
A0A2E4IZM5_9BACT1.460e-731.49ULP_PROTEASE domain-containing protein n=1 Tax=Opi... [more]
A0A833QNP1_9POAL2.010e-731.37Putative ubiquitin-like-specific protease 1B isofo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.395.10Adenoviral Proteinase; Chain Acoord: 52..306
e-value: 1.5E-22
score: 82.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..221
NoneNo IPR availablePANTHERPTHR12606:SF1DENEDDYLASE 1, ISOFORM C-RELATEDcoord: 55..276
NoneNo IPR availablePANTHERPTHR12606SENTRIN/SUMO-SPECIFIC PROTEASEcoord: 55..276
IPR003653Ulp1 protease family, C-terminal catalytic domainPFAMPF02902Peptidase_C48coord: 98..284
e-value: 1.6E-8
score: 34.7
IPR003653Ulp1 protease family, C-terminal catalytic domainPROSITEPS50600ULP_PROTEASEcoord: 83..283
score: 14.468725
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 56..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_171contigContig_171:142559..146150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353571mRNA_15347Tribonema minus UTEX_B_3156 mRNAContig_171 142559..147609 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353571|estExt_Genemark1.C_Ctg_1710025 ID=Trimin1|353571|estExt_Genemark1.C_Ctg_1710025|Name=jgi.p|Trimin1|353571|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=496bp
MALGRSEHVYAETACSAHNSSAVTPSGSNGEGYRPPQPRDLDAVSSLPPD
LVPRALTPEERGALHAAFARPDTQPVVSIDGNSVSADRFFAGLRPGGWLN
DEVINCWLATLRLRFPRTVFANTQFYANLMAGYPSIRAGVCYCFKHVVKW
CEGRSGEKSGLARLWRDPTVSKFVVPVHMSGNHWVLVAADFNTHTVTEYD
SLGAGEAEGGGGEDGAGMEDENGASLSRSYHVLMFLEDLSFWTAGDDSAQ
LPHWWELASAPEAPRHPDTCSCGVFAAFAAAAVAAAPRGASPDFLSYSIP
HARGQEWRRAQACRAALMRETIARVLVSDSSREEERKAALAAQATARTTT
LGDPPDSGHARMSYAINSSISSSSIKLDVRLAAPFSRGTVVKHLADRLGC
EAWFHQGKSRGFLLGGSNDAVPTVSGSADKLLELLSALLSSGPAGFSQDM
RMSLRVTNMSPSMLCRLLNLVPGAVAAGQGAVSHSAQQTLSHFNI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003653Peptidase_C48_C
IPR038765Papain-like_cys_pep_sf