mRNA_15235 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353551 vs. uniprot
Match: A0A835ZF69_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF69_9STRA) HSP 1 Score: 902 bits (2331), Expect = 0.000e+0 Identity = 456/456 (100.00%), Postives = 456/456 (100.00%), Query Frame = 1
Query: 1 MRKSFAAKVAKVARAPSQPVLQYNQEQDEXXXXVQQQPLQQWDFSSRRVVCEASEEFSGVAAAASSSLPCENNFVKDIHFSPDGTCLLAASEDCKLRLYEAPDPDRGDGSSSSGAPPWRCCLQYNEGETIYSMAWYPHMSSSTPASCCFVTTARDHPLHLWCAYTGALRATYRGYDHLDELSSALSVAFNAAGTHIWGGHPGGCLRCWDITRPGREYQTRSTVPKGKKCRGRGQTGLISALAFAPDGSGLFAAGAYSRSVCLYDESAXXXXXXXXXXXXXRWSGKGPGVVAELSPGDVKMGGVTALRWHPDGNRLFSGGRMDDAVVCWDVRSGRAPLRTFARPAATNQRFGVDVDASGRYLVTGASDGCARVHNVASGALVSALADLPDAVGGVSFSPAAPLLAVATGQRHFPQCDDDEVHGGDGTEETLLRRNVIRIYDMRGSDRPAQEAVGMNE 1368
MRKSFAAKVAKVARAPSQPVLQYNQEQDEXXXXVQQQPLQQWDFSSRRVVCEASEEFSGVAAAASSSLPCENNFVKDIHFSPDGTCLLAASEDCKLRLYEAPDPDRGDGSSSSGAPPWRCCLQYNEGETIYSMAWYPHMSSSTPASCCFVTTARDHPLHLWCAYTGALRATYRGYDHLDELSSALSVAFNAAGTHIWGGHPGGCLRCWDITRPGREYQTRSTVPKGKKCRGRGQTGLISALAFAPDGSGLFAAGAYSRSVCLYDESAXXXXXXXXXXXXXRWSGKGPGVVAELSPGDVKMGGVTALRWHPDGNRLFSGGRMDDAVVCWDVRSGRAPLRTFARPAATNQRFGVDVDASGRYLVTGASDGCARVHNVASGALVSALADLPDAVGGVSFSPAAPLLAVATGQRHFPQCDDDEVHGGDGTEETLLRRNVIRIYDMRGSDRPAQEAVGMNE
Sbjct: 1 MRKSFAAKVAKVARAPSQPVLQYNQEQDEXXXXVQQQPLQQWDFSSRRVVCEASEEFSGVAAAASSSLPCENNFVKDIHFSPDGTCLLAASEDCKLRLYEAPDPDRGDGSSSSGAPPWRCCLQYNEGETIYSMAWYPHMSSSTPASCCFVTTARDHPLHLWCAYTGALRATYRGYDHLDELSSALSVAFNAAGTHIWGGHPGGCLRCWDITRPGREYQTRSTVPKGKKCRGRGQTGLISALAFAPDGSGLFAAGAYSRSVCLYDESAXXXXXXXXXXXXXRWSGKGPGVVAELSPGDVKMGGVTALRWHPDGNRLFSGGRMDDAVVCWDVRSGRAPLRTFARPAATNQRFGVDVDASGRYLVTGASDGCARVHNVASGALVSALADLPDAVGGVSFSPAAPLLAVATGQRHFPQCDDDEVHGGDGTEETLLRRNVIRIYDMRGSDRPAQEAVGMNE 456
BLAST of jgi.p|Trimin1|353551 vs. uniprot
Match: A0A8K1FL14_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL14_PYTOL) HSP 1 Score: 280 bits (715), Expect = 2.580e-86 Identity = 159/395 (40.25%), Postives = 223/395 (56.46%), Query Frame = 1
Query: 157 ASEEFSGVAAAASSSLPCENNFVKDIHFSPDGTCLLAASEDCKLRLYEAPDPDRGDGSSSSGAPPWRCCLQYNEGETIYSMAWYPHMSSSTPASCCFVTTARDHPLHLWCAYTGALRATYRGYDHLDELSSALSVAFNAAGTHIWGGHPGGCLRCWDITRPGREYQTRSTVPKGKKCRGRGQTGLISALAFAPDGSGLFAAGAYSRSVCLYDESAXXXXXXXXXXXXXRWSGKGPGVVAELSPGDVKMGGVTALRWHPDGNRLFSGGRMDDAVVCWDVRSGRAPLRTFARPAATNQRFGVDVDASGRYLVTGASDGCARVHNVASGALVSALADLPDAVGGVSFSPAAPL--LAVATGQRHFPQCDDDEVHGGDGTEETLL----RRNVIRIYDM 1323
AS EF+G+ A S NNF K + SPDG C+L +SED LR++E P + D S LQ EG +Y AWYP+M+S PA+C F++T+RDHP+H+W AYTG LRATYR +DHLDE+++A SVAFNA G I+ G+ +R +DIT+P R++ +R K +K R GQ G+IS L F PD S ++AAG+Y+ + C+Y E L D G+T +++ PDG LF+G R D ++ CWD+R +++F R A TNQR D+ +GRYL TG+ DG A +++V++G LV +PDAV GVSF P A +AV TGQRH+ DD +RN +R+++
Sbjct: 61 ASHEFNGMNHAVSG----HNNFTKGVKVSPDGLCMLTSSEDHILRIFELPSEENADVEQLS-------ILQAKEGGAVYDYAWYPYMTSQDPATCIFISTSRDHPIHMWDAYTGQLRATYRAFDHLDEITAAFSVAFNATGDKIFAGYDR-MIRFFDITQPSRDFVSRPLC-KTRKSRD-GQRGIISTLHFNPDHSKIYAAGSYNGTTCIYTEDTGEEL---------------------LCLRDHDGHGITQVQFSPDGRYLFTGARRDGSIHCWDIRQSVQVVQSFTRQAETNQRVEFDLHCTGRYLATGSRDGRALLYDVSTGELVDENIRMPDAVNGVSFFPDATRGRVAVTTGQRHYDLPDDSXXXXXXXXXXXXXXXXSQRNALRVFEF 420
BLAST of jgi.p|Trimin1|353551 vs. uniprot
Match: A0A662X8T5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X8T5_9STRA) HSP 1 Score: 275 bits (704), Expect = 1.910e-84 Identity = 164/421 (38.95%), Postives = 226/421 (53.68%), Query Frame = 1
Query: 127 DFSSRRVVCEASEEFSGVAAAASSSLPCENNFVKDIHFSPDGTCLLAASEDCKLRLYEAPDPDRGDGSSSSGAPPWRCCLQYNEGETIYSMAWYPHMSSSTPASCCFVTTARDHPLHLWCAYTGALRATYRGYDHLDELSSALSVAFNAAGTHIWGGHPGGCLRCWDITRPGREYQTRSTVPKGKKCRGR-GQTGLISALAFAPDGSGLFAAGAYSRSVCLYDESAXXXXXXXXXXXXXRWSGKGPGVVAELSPGDVKMGGVTALRWHPDGNRLFSGGRMDDAVVCWDVRSGRAPLRTFARPAATNQRFGVDVDASGRYLVTGASDGCARVHNVASGALVSALADLPDAVGGVSF--SPAAPLLAVATGQRHFPQCDDDEVHGGDGTEETLLR-----------RNVIRIYDMRGSDRPAQ 1347
D RV+ A EEF V+ C NNF K + SPDG CLL S+D LRL+E SS + P LQ EG T+Y AWYP MSS+ P+SC FV+T+RDHP+HLW AYTGALRA+YR +DHLDEL+SA SVAFNA G ++ G +R +D+++P R++ R P K R R GQ GLIS+L F PD S ++AAG+Y+ + C+Y E L+ D G++ +R+ P G L++ R D ++ CWD+R+ L TF R A +NQR DV G+YL TG+ G +++ +GAL+ LPD GVSF P+ LAV++GQRH+ D +V DG + + RN++++YD + Q
Sbjct: 56 DTMRPRVLFTAYEEFDAVSPL------CRNNFTKGVKVSPDGLCLLTNSDDHVLRLFEM---------SSDQSQPHSSILQAREGGTVYDYAWYPFMSSANPSSCIFVSTSRDHPVHLWDAYTGALRASYRSFDHLDELASAQSVAFNATGDKLFAGFDR-MIRFFDLSQPSRDFHAR---PLSKTRRSRKGQRGLISSLHFNPDFSKIYAAGSYAGTTCVYTEDEGEEL---------------------LALRDHDGRGISQVRFSPCGRFLYTAARRDPSIHCWDIRATNQILHTFHRVADSNQRVEFDVHCGGKYLATGSRSGRVLLYDTQTGALLDERIQLPDCANGVSFFPDPSRATLAVSSGQRHYDLPSDMQVEEEDGDADKAVEIADKTDGRPPYRNLLQVYDFQAPQEQIQ 436
BLAST of jgi.p|Trimin1|353551 vs. uniprot
Match: A0A7S3V0G4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V0G4_9STRA) HSP 1 Score: 273 bits (697), Expect = 3.940e-83 Identity = 158/391 (40.41%), Postives = 216/391 (55.24%), Query Frame = 1
Query: 169 FSGVAAAASSSLPCENNFVKDIHFSPDGTCLLAASEDCKLRLYEAPDPDRGDGSSSSGAPPWRCCLQYNEGETIYSMAWYPHMSSSTPASCCFVTTARDHPLHLWCAYTGALRATYRGYDHLDELSSALSVAFNAAGTHIWGGHPGGCLRCWDITRPGREYQTRSTVPKGKKCRGRGQTGLISALAFAPDGSGLFAAGAYSRSVCLYDESAXXXXXXXXXXXXXRWSGKGPGVVAELSPGDVKMGGVTALRWHPDGNRLFSGGRMDDAVVCWDVRSGRAPLRTFARPAATNQRFGVDVDASGRYLVTGASDGCARVHNVASGALVSALADLPDAVGGVSFSPA-APLLAVATGQRHFPQCDDDEVHGGDGTEETLLRRNVIRIYDMRGSDR 1338
F + S S C + F K + FS DG+C+L+ +D LR++E GS S P R LQ +EGE IY WYP+ SS P +CCF + ++DHP+HLW AY G LRATY D DEL+ +S+ FN G I G C+ +DI+RPG + + R TVP K G Q GLIS AF PD SG+ AAG+YS+S+CLY E+ +AEL+ GGVT L + P+ N L SG R ++ + WD+R P+ + R TNQR D+D SG+Y+VTG++DG AR++N+ +GALV+ + PD V G +F P + ++TGQRHF CDDD + GD T L N I+++ DR
Sbjct: 100 FQLLGKTESESEDCRS-FFKGVKFSGDGSCILSCGDDNILRVFETQGIVTQKGSKSKLFP--RSVLQISEGECIYDYGWYPNSDSSDPVTCCFASISKDHPVHLWDAYNGTLRATYSPIDEKDELARVISLCFNPFGNKIAAGGES-CMYIFDISRPGTQTEYRKTVPTKKSKEG--QRGLISCFAFKPDCSGVIAAGSYSKSICLYAENDSNR------------------TIAELTG---HKGGVTNLLFTPNCNYLLSGSRKENEIFHWDIRMSITPVNRYERRVETNQRIYFDIDPSGKYMVTGSTDGDARIYNILTGALVATMPHQPDTVNGAAFHPRNRGTILISTGQRHFKYCDDD--NEGDNINSTAL--NSIQMWTQLMDDR 459
BLAST of jgi.p|Trimin1|353551 vs. uniprot
Match: A0A2D4C9P1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9P1_PYTIN) HSP 1 Score: 271 bits (693), Expect = 4.300e-83 Identity = 159/397 (40.05%), Postives = 222/397 (55.92%), Query Frame = 1
Query: 169 FSGVAAAASSSLPCENNFVKDIHFSPDGTCLLAASEDCKLRLYEAPDPDRGDGSSSSGAPPWRCCLQYNEGETIYSMAWYPHMSSSTPASCCFVTTARDHPLHLWCAYTGALRATYRGYDHLDELSSALSVAFNAAGTHIWGGHPGGCLRCWDITRPGREYQTRSTVPKGKKCRGRGQTGLISALAFAPDGSGLFAAGAYSRSVCLYDESAXXXXXXXXXXXXXRWSGKGPGVVAELSPGDVKMGGVTALRWHPDGNRLFSGGRMDDAVVCWDVRSGRAPLRTFARPAATNQRFGVDVDASGRYLVTGASDGCARVHNVASGALVSALADLPDAVGGVSF--SPAAPLLAVATGQRHF--PQCDD------DEVHGGDGTEETLLRRNVIRIYDMRG 1329
FS A A ++ NNF + + +PDG C+L +SED LRL++ PD G G A P R +Q EG +Y WYP M SS P SC FV+T+RD P+H+W AYTGALRATYR +DHLDE+++A SVAFNA G ++ G+ +R +DITRP R+++TR+ K ++ R GQ G+IS L F PD S ++AAG+Y+ + +Y E L D GVT +++ P GN L++ R D + CWDVR +++F+R A TNQR DV +GRYL+TG+ DG A +++V +G +PDAV GVSF P+ +A++TGQRH+ P DD D D TE LR + + + G
Sbjct: 50 FSATAEFADATAAVPNNFTRGVKVAPDGLCVLTSSEDQCLRLFDVPDDQDGAGX----AAPVRSSVQAKEGGAVYDFCWYPFMRSSDPTSCIFVSTSRDQPIHMWDAYTGALRATYRAFDHLDEITAAFSVAFNATGDKLFAGYDR-TIRVFDITRPSRDFETRALC-KTRRSRD-GQRGIISTLHFNPDHSRVYAAGSYNGTTYVYSEDTGEEI---------------------LCLRDHDGRGVTQVQFSPCGNYLYTAARRDATINCWDVRHSLQVVQSFSRLADTNQRIEFDVHCTGRYLMTGSRDGRALLYDVPTGERXDDRLAMPDAVNGVSFFPDPSRARVAISTGQRHYEIPGVDDSDGXDEDXEASXDATERQRLRX-ALHVVEFEG 417
BLAST of jgi.p|Trimin1|353551 vs. uniprot
Match: A0A7S2GDB9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GDB9_9STRA) HSP 1 Score: 270 bits (689), Expect = 5.510e-83 Identity = 159/384 (41.41%), Postives = 210/384 (54.69%), Query Frame = 1
Query: 205 PCENNFVKDIHFSPDGTCLLAASEDCKLRLYEAPDPDRGDGSSSSGAPPWRCCLQYNEGETIYSMAWYPHMSSSTPASCCFVTTARDHPLHLWCAYTGALRATYRGYDHLDELSSALSVAFNAAGTHIWGGHPGGCLRCWDITRPGREYQTRSTVPKGKKCRGRGQTGLISALAFAPDGSGLFAAGAYSRSVCLYDESAXXXXXXXXXXXXXRWSGKGPGVVAELSPGDVKMGGVTALRWHPDGNRLFSG---GRMDDA--VVCWDVRSGRAPLRTFARPAATNQRFGVDVDASGRYLVTGASDGCARVHNVASGALVSALADLPDAVGGVSFSPAAPLLAVATGQRHFPQCD--DDEVHGGDGTE--------ETLLRRNVIR 1311
P N+F K + +SPDGTC+L+A + L LYE P S G+ W L EGET+Y WYPHM S P +C F +T+RDHP+HLW A+TG +RATYR YDHLDE +A S+AF+ GT + G+ C+R +D+ PGR R T K G Q G+ISALA AP+ S L+AAG+YS S+ LYD + G +GGVT L++ DG LFSG G DA V+CWDVR L ++ R A+T QR D+D +GRYLVTG G A+V+++ SGA+V D V GVSF P PLLA++TG RH D D GDG + ++++ +N +R
Sbjct: 3 PSLNHFTKGVAWSPDGTCILSADDSNALNLYELP---------SDGSTQWSPVLAPREGETVYDYKWYPHMRSDQPVTCVFASTSRDHPIHLWDAFTGTIRATYRAYDHLDENVAAYSMAFSEDGTQLLAGY-NRCVRVFDLAHPGRPISDRPTSASRKAKTG--QRGIISALAVAPESS-LYAAGSYSESIVLYDLRSGKCRLEMETCCH--------------DTGASIIGGVTQLQFSRDGRFLFSGSRRGHTPDASHVICWDVRQTGEMLASYPRDASTYQRIQFDLDPTGRYLVTGDEGGKAKVYDLTSGAVVKEYPRQGDVVNGVSFHPTLPLLAISTGTRHADTADVVQDSAETGDGMDTEPTTDLHQSIIEQNFVR 359
BLAST of jgi.p|Trimin1|353551 vs. uniprot
Match: K3WVC6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVC6_GLOUD) HSP 1 Score: 266 bits (680), Expect = 1.910e-81 Identity = 161/402 (40.05%), Postives = 223/402 (55.47%), Query Frame = 1
Query: 142 RVVCEASEEFSGVAAAASSSLPCENNFVKDIHFSPDGTCLLAASEDCKLRLYEAPDPDRGDGSSSSGAPPWRCCLQYNEGETIYSMAWYPHMSSSTPASCCFVTTARDHPLHLWCAYTGALRATYRGYDHLDELSSALSVAFNAAGTHIWGGHPGGCLRCWDITRPGREYQTRSTVPKGKKCRGR-GQTGLISALAFAPDGSGLFAAGAYSRSVCLYDESAXXXXXXXXXXXXXRWSGKGPGVVAELSPGDVKMGGVTALRWHPDGNRLFSGGRMDDAVVCWDVRSGRAPLRTFARPAATNQRFGVDVDASGRYLVTGASDGCARVHNVASGALVSALADLPDAVGGVSF--SPAAPLLAVATGQRHF---PQCDDDEVHGGDGTEETLLRRNVIRIYDMRG 1329
R+V A EEF S SL NNF K + SPDG C+L SED LRL+E D + ++S LQ EG +Y AWYP M+S P SC FV+T+RD P+H+W AYTG LRATYR YDHLDE+++A S+AFN G I+ G +R +DI++P R+++ R P K R R GQ G+IS + F PD S ++AAG+Y + C+Y E +G ++ L D K G+T +++ PDG LF+ R D + CWD+R+ L TF R A TNQR D+ +GRYL +G+ DG ++++ +G LV LPDA GVSF P+A +AV +GQRH+ P +DD D + + RN + +Y+ G
Sbjct: 18 RLVFHAHEEFQ---QQRSPSLSAFNNFTKGVKVSPDGLCMLTNSEDHVLRLFEMSDDVQAPAATS--------ILQAKEGGAVYDFAWYPFMNSQVPESCIFVSTSRDQPVHMWDAYTGDLRATYRAYDHLDEIAAANSIAFNTTGDKIFCGFDR-MIRFFDISQPSRDFKAR---PLSKTRRSREGQRGIISTIHFNPDHSKIYAAGSYGGTTCIYTED------------------RGEELLC-LRDHDGK--GITQVQFSPDGRFLFTAARRDSRIHCWDIRNSNQILYTFHRIADTNQRIEFDLHCAGRYLASGSQDGKVLLYDLLTGELVDDGVRLPDAANGVSFFPDPSAARVAVTSGQRHYDLPPDMEDD-----DEVVKRVESRNALHVYEYNG 378
BLAST of jgi.p|Trimin1|353551 vs. uniprot
Match: A0A0P1A8N8_PLAHL (Guanine nucleotide-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8N8_PLAHL) HSP 1 Score: 264 bits (674), Expect = 1.740e-80 Identity = 157/397 (39.55%), Postives = 220/397 (55.42%), Query Frame = 1
Query: 157 ASEEFSGVAAAASSSLPCENNFVKDIHFSPDGTCLLAASEDCKLRLYEAPDPDRGDGSSSSGAPPWRCCLQYNEGETIYSMAWYPHMSSSTPASCCFVTTARDHPLHLWCAYTGALRATYRGYDHLDELSSALSVAFNAAGTHIWGGHPGGCLRCWDITRPGREYQTRSTVPKGKKCRGR-GQTGLISALAFAPDGSGLFAAGAYSRSVCLYDESAXXXXXXXXXXXXXRWSGKGPGVVAELSPGDVKMGGVTALRWHPDGNRLFSGGRMDDAVVCWDVRSGRAPLRTFARPAATNQRFGVDVDASGRYLVTGASDGCARVHNVASGALVSALADLPDAVGGVSF--SPAAPLLAVATGQRHFPQCDDDEVHGGDGTEETLLRRNVIRIYDMRGSDR 1338
AS+EFS + + C NNF K + SPDG CLL S+D LRL+E + D +S LQ EG IY WYP MSS+ P SC FV+T+RD P+HLW AYTG LRA+YR +DH+DEL+SA S+AFN GT ++ G +R +D+++P R++Q R P K R R GQ GLIS L F PD S ++AAG+Y+ + C+Y E KG ++ G G+T +++ P G LF+ R D + CWD+R+ L TF R A TN R D+ G+YL TG+ GC +++V +GAL++ LPD GVSF P +LAV++GQRH+ +D + D + + NV+++YD + R
Sbjct: 32 ASKEFSFTSPS------CSNNFTKGVKVSPDGLCLLTNSDDHVLRLFEV--CNEFDSTS---------LLQCKEGNAIYDFEWYPFMSSADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELTSAHSLAFNTTGTKLFAGFDR-MIRYFDLSQPSRDFQAR---PLSKTRRSRDGQRGLISTLDFNPDHSQIYAAGSYAGTTCVYTED------------------KGEELLTLRDHGGR---GITQVKFSPCGRFLFTAARQDAQIHCWDIRASNEILHTFNRVADTNLRIEFDLHCGGKYLATGSRSGCVMLYDVMTGALLNENIRLPDCANGVSFFPDPTRAMLAVSSGQRHYDLPED--MQDEDESWNKKVAANVVQVYDFQNPQR 384
BLAST of jgi.p|Trimin1|353551 vs. uniprot
Match: A0A1Y1ISL7_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ISL7_KLENI) HSP 1 Score: 265 bits (677), Expect = 1.350e-79 Identity = 149/392 (38.01%), Postives = 213/392 (54.34%), Query Frame = 1
Query: 217 NFVKDIHFSPDGTCLLAASEDCKLRLYEAP---------DPDRGDGSSSSGAPPWRCCLQYNEGETIYSMAWYPHMSSSTPASCCFVTTARDHPLHLWCAYTGALRATYRGYDHLDELSSALSVAFNAAGTHIWGGHPGGCLRCWDITRPGREYQTRSTVPKGKKCRGRGQTGLISALAFAPDGSGLFAAGAYSRSVCLYDESAXXXXXXXXXXXXXRWSGKGPGVVAELSPGDVKMGGVTALRWHPDGNRLFSGGRMDDAVVCWDVRSGRAPLRTFARPAA-TNQRFGVDVDASGRYLVTGASDGCARVHNVASGALVSALADLPDAVGGVSFSPAAPLLAVATGQRHFPQCDDDEVHGGDGTEETLLRRNV-IRIYDMRGSDRPAQEAVG 1359
NF+K + +SPDGT L SED KLR+++ P D + D S ++ W EGE +Y AW+P+M +S PA+CCFV T+RD P+HLW AYTG LR TYRGY+ DE+++A SVAF+ G +W G+ C+R +D+ RPGREY TV K GQ G+IS L+ +PD GL AAG+Y R+V +Y E+ + +L GG+T +++ DG L+SG R D +++CWDVR + +R ++ TNQR D++ GR+L TG DGC RV ++ +G L + PD V G F P PL+A A+G+R F D+D+ E+ +R +V I + + P A G
Sbjct: 77 NFLKGVKWSPDGTSFLTNSEDAKLRVFDLPADTLQRPALDSEVEDDSVAAALTIW-------EGEIVYDFAWFPNMHASDPATCCFVATSRDKPVHLWDAYTGQLRGTYRGYNDKDEVTAAFSVAFSTGGDRLWCGYEQ-CIRVFDVARPGREYTEHMTVNGVTK---EGQAGIISCLSASPDHGGLVAAGSYDRTVGIYSEA----------------------MAEQLFVLSGHTGGITQVQFSRDGTYLYSGARKDGSILCWDVRYTVGEVYRLSRESSNTNQRIAFDIEPGGRHLATGGEDGCVRVFDLTTGELKATHRAAPDTVNGFGFHPMLPLVATASGERRFRVWDEDDEEDEREAEDEGMRNSVSIWRFACSWPEGPVSSADG 435
BLAST of jgi.p|Trimin1|353551 vs. uniprot
Match: A0A6A3FPX2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FPX2_9STRA) HSP 1 Score: 262 bits (669), Expect = 1.630e-79 Identity = 162/420 (38.57%), Postives = 232/420 (55.24%), Query Frame = 1
Query: 106 QQPLQQWDFSSR-RVVCEASEEFSGVAAAASSSLPCENNFVKDIHFSPDGTCLLAASEDCKLRLYEAPDPDRGDGSSSSGAPPWRCCLQYNEGETIYSMAWYPHMSSSTPASCCFVTTARDHPLHLWCAYTGALRATYRGYDHLDELSSALSVAFNAAGTHIWGGHPGGCLRCWDITRPGREYQTRSTVPKGKKCRGRGQTGLISALAFAPDGSGLFAAGAYSRSVCLYDESAXXXXXXXXXXXXXRWSGKGPGVVAELSPGDVKMGGVTALRWHPDGNRLFSGGRMDDAVVCWDVRSGRAPLRTFARPAATNQRFGVDVDASGRYLVTGASDGCARVHNVASGALVSALADLPDAVGGVSF--SPAAPLLAVATGQRHF----PQCDDDEVHGGDGTE------ETLLRRNVIRIYDMR 1326
Q P+ +D + R ++ AS+EFS V+AA C NNF K + SPDG CLL S+D LRL+E GD S SS + LQ EG T+Y WYP MSS+ P SC FV+T+RD P+HLW AYTG LRA+YR +DH+DEL+SA S+AFN+ GT ++ G +R +D+++P R+++ R + K ++ R +GQ GLIS L F PD S ++AAG+Y + C+Y E L+ D G++ +++ P G LF+ R D + CWD+R+ L TF R A TNQR D+ GRYL TG+ +++V +G L+ LPD GVSF P ++AV++GQRH+ DD+E D E + RNV+++Y ++
Sbjct: 18 QPPVFSYDAAMRPQLQFTASKEFSNVSAA------CSNNFTKGVKVSPDGLCLLTNSDDHTLRLFEV----SGDASQSSSS-----ILQAREGGTVYDYQWYPFMSSADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELASAQSLAFNSTGTKLFAGFDR-MIRYFDLSQPSRDFRARP-LTKTRRSR-KGQRGLISTLHFNPDHSKIYAAGSYGGTTCVYTEDEGEEL---------------------LALRDHDGRGISQVKFSPCGRFLFTAARRDARIHCWDIRATNEILHTFNRVADTNQRVEFDLHCGGRYLATGSQTCRVMLYDVLTGELLDQSIRLPDCANGVSFFPDPYRAIVAVSSGQRHYNLPEDMQDDEEGATADIAEIGMKATASTQPRNVLQVYGIQ 398 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353551 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15235 ID=mRNA_15235|Name=jgi.p|Trimin1|353551|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1389bp|location=Sequence derived from alignment at Contig_170:3810..11884- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGAAAGAGCTTTGCCGCCAAGGTAGCCAAGGTCGCCAGGGCACCCAGback to top protein sequence of jgi.p|Trimin1|353551 >Trimin1|353551|estExt_Genemark1.C_Ctg_1700002 ID=Trimin1|353551|estExt_Genemark1.C_Ctg_1700002|Name=jgi.p|Trimin1|353551|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=457bp MRKSFAAKVAKVARAPSQPVLQYNQEQDEQQEEVQQQPLQQWDFSSRRVVback to top mRNA from alignment at Contig_170:3810..11884- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15235 ID=mRNA_15235|Name=jgi.p|Trimin1|353551|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8075bp|location=Sequence derived from alignment at Contig_170:3810..11884- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_170:3810..11884- >mRNA_15235 ID=mRNA_15235|Name=jgi.p|Trimin1|353551|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1371bp|location=Sequence derived from alignment at Contig_170:3810..11884- (Tribonema minus UTEX_B_3156 )back to top |