mRNA_15240 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A836CJR5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJR5_9STRA) HSP 1 Score: 668 bits (1723), Expect = 3.840e-235 Identity = 559/559 (100.00%), Postives = 559/559 (100.00%), Query Frame = 1 Query: 1 METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLREAGCGWDRRXXXXXXXXXXXXXXXXXXXXXAPICKNTAIKDAAGREHLRAVQWLHVRGSFYEFALHESVSAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHARRSPWDETTCAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADGILPPLPKAGGRGIIWGHVPTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLLAQGARCDDVQPLLDIAALSGDVGLLQWSHSVGADLDLQTLVRSAVSHGHFEVLAWMHTEGLLLRAHDGLRQHATLSXXXXXXXXXXXXXXXXXLLTDEDVCVTAXXXXXXXXXXXXXXXXXXXXXXXXXTLFTNGGAGYAYDNVPQRFKEVIYLAQTRGCTCPIHEHCPIPREDLEVSEPGVIWEYDSDTVHDPEFFPWYRRYVTEDAP 1677 METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLREAGCGWDRRXXXXXXXXXXXXXXXXXXXXXAPICKNTAIKDAAGREHLRAVQWLHVRGSFYEFALHESVSAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHARRSPWDETTCAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADGILPPLPKAGGRGIIWGHVPTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLLAQGARCDDVQPLLDIAALSGDVGLLQWSHSVGADLDLQTLVRSAVSHGHFEVLAWMHTEGLLLRAHDGLRQHATLSXXXXXXXXXXXXXXXXXLLTDEDVCVTAXXXXXXXXXXXXXXXXXXXXXXXXXTLFTNGGAGYAYDNVPQRFKEVIYLAQTRGCTCPIHEHCPIPREDLEVSEPGVIWEYDSDTVHDPEFFPWYRRYVTEDAP Sbjct: 1 METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLREAGCGWDRRXXXXXXXXXXXXXXXXXXXXXAPICKNTAIKDAAGREHLRAVQWLHVRGSFYEFALHESVSAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHARRSPWDETTCAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADGILPPLPKAGGRGIIWGHVPTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLLAQGARCDDVQPLLDIAALSGDVGLLQWSHSVGADLDLQTLVRSAVSHGHFEVLAWMHTEGLLLRAHDGLRQHATLSXXXXXXXXXXXXXXXXXLLTDEDVCVTAXXXXXXXXXXXXXXXXXXXXXXXXXTLFTNGGAGYAYDNVPQRFKEVIYLAQTRGCTCPIHEHCPIPREDLEVSEPGVIWEYDSDTVHDPEFFPWYRRYVTEDAP 559
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A836CII6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CII6_9STRA) HSP 1 Score: 112 bits (280), Expect = 5.380e-23 Identity = 72/179 (40.22%), Postives = 92/179 (51.40%), Query Frame = 1 Query: 868 AGGRGIIWG--------------HVPTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLLAQGARCD----------------------------DVQPLLDIAALSGDVGLLQWSH-SVG-ADLDLQTLVRSAVSHGHFEVLAWMHTEGLLLRAHDGLRQHAT 1272 AG RG WG ++P +A +G ++ LKYV+ENGC W + C AA +GD++MLD+ +A GA CD DV+PLL AAL+G V LLQW S+G + D+ LVR+A G EVLAWMH GLL+RAHD LRQ AT Sbjct: 204 AGERGFPWGSHKAAACVELIHRDYMPVVAAKGDSIEVLKYVIENGCEWD------QRVCSEAAGRGDVQMLDWAVANGAPCDYAEVTKRAWRAGRTAQLEVTKWLHTRGEDVKPLLVDAALAGHVPLLQWGRRSLGFSTTDVPALVRAAAKGGSVEVLAWMHAAGLLMRAHDDLRQLAT 376
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A835ZGN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGN6_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.100e-8 Identity = 33/58 (56.90%), Postives = 36/58 (62.07%), Query Frame = 1 Query: 1 METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLREAGCGWDRR 174 M TAV+HVV + L QWAV GGG S CA AAR GQL LQWLR+ C WD R Sbjct: 72 MMTAVEHVVDNFSLFQWAVDAGGGGCPKSADLCASAARSGQLPLLQWLRDGDCEWDNR 129
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A836CK28_9STRA (Pept_C1 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK28_9STRA) HSP 1 Score: 682 bits (1760), Expect = 1.900e-248 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 1 Query: 1 RMAFDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP 978 RMAFDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP Sbjct: 1 RMAFDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP 326
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S2BCN1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BCN1_9STRA) HSP 1 Score: 361 bits (926), Expect = 3.170e-119 Identity = 166/288 (57.64%), Postives = 205/288 (71.18%), Query Frame = 1 Query: 157 KVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE--TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY------------KAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP 978 K G S + GW++ +DCAAC +YP NYT+ N+P FDWRA + T V +Q YCGSCWSFSTA DIEGK + ATG+ V LS+QQLVACD K GC+GG PY AMQY++ GG+++E YPYK +CAWG CG+ GTPTCD+D + ++K V+ IGGWQMVA+G YEDL+ A+VKNGPISI LNA GM+YY AGAID PCEPT LDHAVL+VG+G +D + YW++KNSWG WGE GYYR+V+G NHCG+ANFA+TSVIK P Sbjct: 202 KFDGSKFSSDEVGWVSVQDCAACALYPHFSNYTMGNLPDSFDWRAIGDVVTDVKNQKYCGSCWSFSTAQDIEGKHYFATGERVRLSEQQLVACDTKD---WGCDGGYPYRAMQYISQVGGMLHEASYPYKGICAWGACGNEEAGTPTCDSDTLNTNIKSGNVSAIGGWQMVAMGEDYEDLMRVALVKNGPISISLNANGMDYYVHGVVGCSNDDCNAGAIDVHTPCEPTALDHAVLLVGYGTEDDIPYWLIKNSWGDLWGEDGYYRLVRGSNHCGVANFAITSVIKAP 486
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: F0Y246_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y246_AURAN) HSP 1 Score: 326 bits (835), Expect = 1.220e-107 Identity = 167/328 (50.91%), Postives = 217/328 (66.16%), Query Frame = 1 Query: 1 RMAFDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE-TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAP--KGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDTTLPCEPTTLDHAVLVVGFG-EQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972 R ++ ++ + R + D E RRFA F+ NLA ID LN ANP A+F GI+S + + W++ DCAAC +P G+Y + N+P +FDWRA T V +Q YCGSCWSFS+AGDIEG FLA ++ LS QQLV+C+ GC+GG P+AAM+YV+ GGLV +DYPYK +C CG GTPTCD + + G L VA I G+Q VA+GA+YEDL+ A+VKNGP+S+ NA GME+Y AG +D PC+PT LDHAVL+VG+G E V YW++KNSW + WGEGGYYR+V+G N CG+AN V SV K Sbjct: 7 RDLYEQFKRRERRDF-DDAEDARRFAIFRRNLATIDTLNAANPAAVF-GITSFCDRTDEERQSVAWVSASDCAACDRFPHFGDYDMGNLPDDFDWRALGAVTAVKNQKYCGSCWSFSSAGDIEGTMFLAGDDLISLSTQQLVSCNTYNY---GCDGGWPFAAMEYVSHFGGLVPMDDYPYKGICMDNMCGGTEIFTGTPTCDKELLNGHLAAGDVAAIEGYQFVAMGAEYEDLMHVALVKNGPLSLAFNANGMEFY-AGGVDHHFPCDPTALDHAVLLVGYGTETFDVPYWLIKNSWDTEWGEGGYYRLVRGVNACGVANMVVHSVHK 328
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S2W4U9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4U9_9STRA) HSP 1 Score: 320 bits (820), Expect = 5.200e-103 Identity = 158/294 (53.74%), Postives = 198/294 (67.35%), Query Frame = 1 Query: 133 ALFEGISSKVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE-TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY-------------KAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972 A+F+ +SSK N+S W++ DCAAC + YT N+P FDWR T V +Q YCGSCW+FSTA D+EG FLATG++ LS+QQLVAC+ A GC+GG PY AMQY+ GGLV ++ Y YK +CAWG CG+ GTPTC T+ + L+ VA IGG+Q+V+LGA+YE LL A+VKNGPISI NA GM+YY AGAID PC+P+ LDHAVL+VG+G + GV YWV+KNSWG WGE GYYR+V+G NHCG+ANFAV SV+K Sbjct: 214 AVFDALSSK----NMSFGMVPWVSASDCAACKRFEHFSLYTWDNLPENFDWRELGAVTDVKNQKYCGSCWTFSTAADLEGTHFLATGELESLSEQQLVACN---TADWGCDGGYPYRAMQYIHKFGGLVTDDAYGYKGICAWGDCGTPVAGTPTCHTEILNAELESKRVASIGGYQLVSLGAEYEALLRLALVKNGPISIAFNANGMDYYLHGVVGCSAENYCDAGAIDHHTPCDPSYLDHAVLIVGYGVEAGVPYWVIKNSWGDAWGEDGYYRIVRGSNHCGVANFAVHSVVK 500
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S2BRB8_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BRB8_9STRA) HSP 1 Score: 285 bits (728), Expect = 1.770e-91 Identity = 146/287 (50.87%), Postives = 179/287 (62.37%), Query Frame = 1 Query: 175 ISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWR-AKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKD---SAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYK----------------AGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKD 975 IS Q W + CAAC YP YT N P FDWR T V +Q YCGSCW+FSTA D+EG FLAT +++ LS+QQ+VACD ++ +GC GG YAAMQYV TGGLV +D PYK V GTPTCDT+ + LK S H G+Q VA+G YED +AT ++KNGP+S+ +NA GMEYY+ AG+I TT PC+PT+LDH VL V +G QDG +YWV+KNSWGS WGE GYYR +G NHCG+AN V SV K+ Sbjct: 12 ISVGQVEWADIDMCAACERYPGFKKYTSENRPDNFDWRDLGAVTEVKNQKYCGSCWTFSTAADVEGTHFLATDELISLSEQQIVACD---SSMDGCEGGYMYAAMQYVEKTGGLVSYDDMPYKGVFM-----DYMLGTPTCDTEAINSVLKSDDLSKFGHSEGFQFVAMGPDYEDRMATILLKNGPLSVGINANGMEYYEFGITGCETIAGSTYCEAGSISTTTPCDPTSLDHGVLAVAYGVQDGTDYWVIKNSWGSEWGEDGYYRQTRGDNHCGVANMVVHSVYKN 290
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S2DDK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDK6_9STRA) HSP 1 Score: 283 bits (723), Expect = 6.860e-91 Identity = 141/278 (50.72%), Postives = 179/278 (64.39%), Query Frame = 1 Query: 139 FEGISS--KVKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYETP-VSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCG-SAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY------------KAGAIDTTLPCEPTTLDHAVLVVGFGEQDG----VEYWVVKNSWGSWWGEGGYYR 912 + G+ S K G + KSQ GWI DCAAC +YP +Y ++NMPT FDWRA + +Q YCGSCW+FST D+EGK FLATG++ S+QQL+ACDQ R GC+GG AAMQY+ GGLV EE YPYK +CAW C + TPTC+T + LK +VAHIG WQMVA+G+ +E+ + +M+KNGPISI +NA M++Y +AG ID C+PT LDHAVL VG+G DG V YW++KNSWG WGE GY+R Sbjct: 39 YTGLDSDDKYTGRQMEKSQVGWIDPADCAACNLYPNFSHYDMSNMPTGFDWRAYGAVSHIRNQKYCGSCWTFSTVADVEGKHFLATGELKNFSEQQLIACDQGR-INWGCDGGYQQAAMQYLVDVGGLVEEEVYPYKGICAWDACDQNISYSTPTCNTTLLNQELKSMSVAHIGSWQMVAMGSDWEEPMVLSMLKNGPISISINAHAMDFYIHGIVGCNHKYCEAGKIDHKKNCDPTELDHAVLAVGYGTSDGTSDGVPYWIIKNSWGKDWGEDGYWR 315
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: F0Y300_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y300_AURAN) HSP 1 Score: 285 bits (730), Expect = 1.350e-90 Identity = 154/341 (45.16%), Postives = 201/341 (58.94%), Query Frame = 1 Query: 10 FDSYRTQHARAYASDGEAERRFAAFKLNLALIDALNDANPLALF-----------EGISSKVKGPNISK-SQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE-TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYYKAGAIDT--TLPCEPTTLDHAVLVVGFGEQ--DG---VEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972 FD + +++++Y + E RF F NL IDALN NP ALF E ++ P+I+ ++ GW + DCAAC +YP G Y + N+P +FDWR T V +Q YCGSCWSFSTA D+EG +LATG + + QQLV C+ GC+GG P+AAMQY++ GG+V E PYK + + + L+D VAHI GWQMVA+GA YE L+ +VKNGP+SI NA GM+YY G C+PT+LDHAVLVVG+G Q DG V YWV+KNSW WGE GYYR+V+G N CG+AN V S++K Sbjct: 89 FDQFIDEYSKSYDTTHEYNDRFTIFSKNLNYIDALNTQNPHALFGLNVFADQTEEERSKRRMTDPSITNYTRVGWASGSDCAACNLYPAFGEYDMGNLPDDFDWRELGAVTRVKNQAYCGSCWSFSTAADLEGTHYLATGDLESYAPQQLVECNTMNL---GCDGGYPFAAMQYLSHFGGMVTWETMPYKKI------------------ELLNEKLEDGDVAHISGWQMVAMGADYESLMRVTLVKNGPLSIAFNANGMDYYVHGVDGDGDMFTCDPTSLDHAVLVVGYGVQHTDGNGKVPYWVIKNSWDDVWGEDGYYRLVRGSNACGVANMVVHSIVK 408
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S3K4M5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4M5_9STRA) HSP 1 Score: 282 bits (721), Expect = 4.210e-88 Identity = 140/294 (47.62%), Postives = 182/294 (61.90%), Query Frame = 1 Query: 178 SKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWRAKYE-TPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY--------------KAGAID--------TTLPCEPTTLDHAVLVVGFGEQD----GVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIKDP 978 ++ +F W + DCAAC + GNY NMP FDWR T V +Q YCGSCWSFSTA D+EG W+LAT +++ S QQLV C+ GC+GG P+AAMQY++ GG++ +D PY V G + P GTPTC+T + +K VAHIGGWQMVALG +YEDL+ ++KNGP+SI NA GM+YY +AG++ C+PT+LDHAVL VG+G Q + YW++KNSWG WGE GYYR+V+G N CG+AN V SV+KDP Sbjct: 217 AQGEFAWASASDCAACRKFTAFGNYNFGNMPDNFDWRTLGAVTSVKNQAYCGSCWSFSTAADVEGTWYLATDELISRSPQQLVECNTMNL---GCDGGYPFAAMQYLSHIGGMLSWDDLPYDKVFE-GDALANPVGTPTCNTHLINEKMKTHQVAHIGGWQMVALGDEYEDLMRVVLLKNGPLSIAFNANGMDYYIHGVAGGCSSAEDCEAGSVSHPDIDGEGDMFTCDPTSLDHAVLAVGYGVQTTDNGDIPYWLIKNSWGDAWGEDGYYRLVRGTNACGVANMVVHSVVKDP 506
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S2GII5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GII5_9STRA) HSP 1 Score: 275 bits (703), Expect = 2.110e-87 Identity = 140/290 (48.28%), Postives = 180/290 (62.07%), Query Frame = 1 Query: 160 VKGPNISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWR-AKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKD--SAVAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY----------------KAGAIDTTLPCEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972 V G + Q W +DCAAC MYP+ +Y N PT+FDWR + V +Q YCGSC+SFSTA +IEG FLATG + S+QQ+VACD +GC+GG Y AMQY+A GGLV E+ YPYK V GTP CDTD + L+ S + HI +Q VA+GA++E+L+ ++KNGP+++ +NA GM+YY AGAIDTT PC+PT LDH VL VG+G Q+G EYWV+KNSWG WGE GYYR+ +G +HCG+AN V K Sbjct: 67 VGGEKLKAGQVRWGGVDDCAACAMYPDFSDYNYTNHPTDFDWRDLGAVSDVKNQKYCGSCYSFSTAQNIEGVHFLATGNLTTFSEQQIVACDFLN---DGCDGGYMYRAMQYIADFGGLVSEDAYPYKAVMM-----DYKLGTPHCDTDLLNEKLEGDGSNIGHISSYQWVAMGAEFENLMKIFLLKNGPLALAVNANGMDYYVHGITGCKTIAGWEYCDAGAIDTTTPCDPTELDHGVLAVGYGNQEGSEYWVIKNSWGPQWGEDGYYRLERGTDHCGVANMVTHGVYK 348
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A7S2BSW9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BSW9_9STRA) HSP 1 Score: 270 bits (690), Expect = 3.730e-86 Identity = 149/293 (50.85%), Postives = 179/293 (61.09%), Query Frame = 1 Query: 175 ISKSQFGWITEEDCAACGMYPELGNYTLANMPTEFDWR-AKYETPVSSQGYCGSCWSFSTAGDIEGKWFLATGQVVELSKQQLVACDQKRNAAEGCNGGLPYAAMQYVASTGGLVYEEDYPYKNVCAWGTCGSAPKGTPTCDTDQVRGSLKDSA--VAHIGGWQMVALGAQYEDLLATAMVKNGPISIVLNAVGMEYY----------------KAGAID------TTLP--CEPTTLDHAVLVVGFGEQDGVEYWVVKNSWGSWWGEGGYYRVVKGQNHCGLANFAVTSVIK 972 IS Q W + CAAC YP YT N P FDWR T V +Q YCGSCW+FSTA DIEG FLATG + S+QQ VACD GC+GG +AAMQYVA G LV EE YPY V + TPTCDTD + L+ +AHI G+QMVA+GA+YEDL+AT M+KNGP+SI +NA GM+YY +AGAID +T+ C PT LDH VL+V +GEQDGV+YWV+KNSW WGE GYYR+ +G N CG++NFA SV K Sbjct: 12 ISVGQVEWADIDMCAACERYPGFKKYTSENRPDNFDWRDLGAVTEVKNQKYCGSCWTFSTAQDIEGTHFLATGNLTSFSEQQFVACDTYNY---GCDGGWMFAAMQYVADFGILVSEEAYPYMGVMM-----TYNLPTPTCDTDLLNSKLEGDGDDIAHIEGYQMVAMGAEYEDLMATYMLKNGPLSIAINANGMDYYVHGIVGCETIAGSEYCEAGAIDAPSDGDSTMEHTCNPTDLDHGVLLVAYGEQDGVDYWVIKNSWAETWGEDGYYRIERGVNKCGVSNFAQHSVYK 296 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_15240 ID=mRNA_15240|Name=jgi.p|Trimin1|178460|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1680bp|location=Sequence derived from alignment at Contig_170:64230..66043+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGAGACTGCAGTGCAGCACGTCGTCGCCGACCTGCCGCTTCTTCAGTGback to top protein sequence of jgi.p|Trimin1|178460 >Trimin1|178460|e_gw1.170.19.1 ID=Trimin1|178460|e_gw1.170.19.1|Name=jgi.p|Trimin1|178460|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=560bp METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLREback to top mRNA from alignment at Contig_170:64230..66043+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_15240 ID=mRNA_15240|Name=jgi.p|Trimin1|178460|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1814bp|location=Sequence derived from alignment at Contig_170:64230..66043+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_170:64230..66043+ >mRNA_15240 ID=mRNA_15240|Name=jgi.p|Trimin1|178460|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1680bp|location=Sequence derived from alignment at Contig_170:64230..66043+ (Tribonema minus UTEX_B_3156 )back to top |