Trimin1|347969|estExt_Genemark1.C_Ctg_170144 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|347969
Unique Name	Trimin1\|347969\|estExt_Genemark1.C_Ctg_170144
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	182

Homology

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BLAST of jgi.p|Trimin1|347969 vs. uniprot
Match: M4BN95_HYAAE (ADP-ribosylation factor n=8 Tax=Oomycota TaxID=4762 RepID=M4BN95_HYAAE)

HSP 1 Score: 362 bits (929), Expect = 1.300e-126
Identity = 175/180 (97.22%), Postives = 180/180 (100.00%), Query Frame = 0

Query:    1 MGLAFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLQKK 180
            MG+AFSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQW+IQACCATTGDGLYEGLDWLSATLQKK
Sbjct:    1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKK 180

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BLAST of jgi.p|Trimin1|347969 vs. uniprot
Match: K3WYT4_GLOUD (ADP-ribosylation factor n=30 Tax=Stramenopiles TaxID=33634 RepID=K3WYT4_GLOUD)

HSP 1 Score: 362 bits (928), Expect = 1.850e-126
Identity = 174/180 (96.67%), Postives = 180/180 (100.00%), Query Frame = 0

Query:    1 MGLAFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLQKK 180
            MG+AFSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDS+LLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQW+IQACCATTGDGLYEGLDWLSATLQKK
Sbjct:    1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKK 180

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BLAST of jgi.p|Trimin1|347969 vs. uniprot
Match: A0A0P1B1D9_PLAHL (Adp-ribosylation factor n=17 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1B1D9_PLAHL)

HSP 1 Score: 360 bits (925), Expect = 1.150e-125
Identity = 174/180 (96.67%), Postives = 180/180 (100.00%), Query Frame = 0

Query:    1 MGLAFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLQKK 180
            MG+AFSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQW+IQACCATTGDGLYEGLDWLSATLQK+
Sbjct:    1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKQ 180

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BLAST of jgi.p|Trimin1|347969 vs. uniprot
Match: B8BS84_THAPS (ADP-ribosylation factor n=39 Tax=Eukaryota TaxID=2759 RepID=B8BS84_THAPS)

HSP 1 Score: 348 bits (892), Expect = 6.120e-121
Identity = 170/182 (93.41%), Postives = 177/182 (97.25%), Query Frame = 0

Query:    1 MGLAFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLR--HRQWYIQACCATTGDGLYEGLDWLSATLQKK 180
            MGL FSR++ERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSND DR+DAARDE+HRMLNEDELRD+VLLVFANKQDLPNAMSAAEMTDKLGLHGLR  +RQWYIQACCATTGDGLYEGLDWLSATL K+
Sbjct:    1 MGLTFSRLFERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDSDRIDAARDEMHRMLNEDELRDAVLLVFANKQDLPNAMSAAEMTDKLGLHGLRPSYRQWYIQACCATTGDGLYEGLDWLSATLVKR 182

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BLAST of jgi.p|Trimin1|347969 vs. uniprot
Match: A0A7S2W572_9STRA (ADP-ribosylation factor n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W572_9STRA)

HSP 1 Score: 347 bits (891), Expect = 1.380e-120
Identity = 166/179 (92.74%), Postives = 174/179 (97.21%), Query Frame = 0

Query:    1 MGLAFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLQK 179
            MGL FSRIW+RMFG++EMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEY+NISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDR+DAARDELHRMLNEDELR+S+LLVFANKQDLPNAMSAAEMT+KLGLH LR R WYIQACCATTGDGLYEGLDWLSATL K
Sbjct:   15 MGLTFSRIWDRMFGRREMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTEKLGLHNLRGRSWYIQACCATTGDGLYEGLDWLSATLTK 193

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BLAST of jgi.p|Trimin1|347969 vs. uniprot
Match: A0A7S1TNC0_9STRA (ADP-ribosylation factor n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNC0_9STRA)

HSP 1 Score: 337 bits (864), Expect = 1.100e-116
Identity = 160/180 (88.89%), Postives = 170/180 (94.44%), Query Frame = 0

Query:    1 MGLAFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLQKK 180
            MGL+FS IW R  G +EMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQG+IFVVDSNDRDRVDAARDELHRM+ EDELR++ LLVFANKQDLPNAM+AAE+T KLGLH +RHRQWYIQACCATTGDGLYEGLDWLSATL K+
Sbjct:    1 MGLSFSAIWARFMGNREMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGVIFVVDSNDRDRVDAARDELHRMMGEDELREATLLVFANKQDLPNAMNAAELTQKLGLHDMRHRQWYIQACCATTGDGLYEGLDWLSATLNKR 180

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BLAST of jgi.p|Trimin1|347969 vs. uniprot
Match: A0A5D6YTC8_9STRA (ADP-ribosylation factor n=3 Tax=Stramenopiles TaxID=33634 RepID=A0A5D6YTC8_9STRA)

HSP 1 Score: 327 bits (839), Expect = 4.070e-113
Identity = 158/164 (96.34%), Postives = 164/164 (100.00%), Query Frame = 0

Query:    1 MGLAFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGD 164
            MG+AFSR++ER+FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDS+LLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQW+IQACCATTGD
Sbjct:    1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGD 164

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BLAST of jgi.p|Trimin1|347969 vs. uniprot
Match: K0RB38_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RB38_THAOC)

HSP 1 Score: 329 bits (843), Expect = 4.130e-112
Identity = 161/170 (94.71%), Postives = 166/170 (97.65%), Query Frame = 0

Query:   13 FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLR--HRQWYIQACCATTGDGLYEGLDWLSATLQKK 180
            FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSND DR+DAARDE+HRMLNEDELRD+VLLVFANKQDLPNAMSAAEMTDKLGLHGLR  +RQWYIQACCATTGDGLYEGLDWLSATL K+
Sbjct:  103 FGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDSDRIDAARDEMHRMLNEDELRDAVLLVFANKQDLPNAMSAAEMTDKLGLHGLRPSYRQWYIQACCATTGDGLYEGLDWLSATLVKR 272

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BLAST of jgi.p|Trimin1|347969 vs. uniprot
Match: A0A7S2WSJ8_9STRA (Hypothetical protein n=3 Tax=Stramenopiles TaxID=33634 RepID=A0A7S2WSJ8_9STRA)

HSP 1 Score: 327 bits (838), Expect = 4.380e-112
Identity = 157/179 (87.71%), Postives = 169/179 (94.41%), Query Frame = 0

Query:    1 MGLAFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLQK 179
            MGL  S+I ER+FGK EMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETV+YKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDR++ AR+ELH+M+NEDELRD+V+LVFANKQDLPNAM+AAE+TDKLGLH LR R WYIQA CATTGDGLYEGLDWLSATL K
Sbjct:   42 MGLHISKIMERLFGKTEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVDYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIEPAREELHKMINEDELRDAVILVFANKQDLPNAMTAAEITDKLGLHSLRSRNWYIQATCATTGDGLYEGLDWLSATLTK 220

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BLAST of jgi.p|Trimin1|347969 vs. uniprot
Match: A0A0K9PPG6_ZOSMR (ADP-ribosylation factor n=6 Tax=Liliopsida TaxID=4447 RepID=A0A0K9PPG6_ZOSMR)

HSP 1 Score: 324 bits (830), Expect = 1.620e-111
Identity = 155/180 (86.11%), Postives = 169/180 (93.89%), Query Frame = 0

Query:    1 MGLAFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWYIQACCATTGDGLYEGLDWLSATLQKK 180
            MGL+FSR++ R+F KKEMRILMVGLDAAGKTTILYKLKLGE+VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHY+QNTQGLIFVVDSNDRDRV  ARDELHRMLNEDELRD+VLLVFANKQDLPNAM+AAE+TDKLGLH LR R WYIQ+ CAT+G+GLYEGLDWLS+ +  K
Sbjct:    1 MGLSFSRLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSSNIASK 180

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347969 vs. uniprot

BLAST of jgi.p|Trimin1|347969 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
M4BN95_HYAAE	1.300e-126	97.22	ADP-ribosylation factor n=8 Tax=Oomycota TaxID=476...	[more]
K3WYT4_GLOUD	1.850e-126	96.67	ADP-ribosylation factor n=30 Tax=Stramenopiles Tax...	[more]
A0A0P1B1D9_PLAHL	1.150e-125	96.67	Adp-ribosylation factor n=17 Tax=Peronosporaceae T...	[more]
B8BS84_THAPS	6.120e-121	93.41	ADP-ribosylation factor n=39 Tax=Eukaryota TaxID=2...	[more]
A0A7S2W572_9STRA	1.380e-120	92.74	ADP-ribosylation factor n=2 Tax=Rhizochromulina ma...	[more]
A0A7S1TNC0_9STRA	1.100e-116	88.89	ADP-ribosylation factor n=2 Tax=Phaeomonas parva T...	[more]
A0A5D6YTC8_9STRA	4.070e-113	96.34	ADP-ribosylation factor n=3 Tax=Stramenopiles TaxI...	[more]
K0RB38_THAOC	4.130e-112	94.71	Uncharacterized protein (Fragment) n=1 Tax=Thalass...	[more]
A0A7S2WSJ8_9STRA	4.380e-112	87.71	Hypothetical protein n=3 Tax=Stramenopiles TaxID=3...	[more]
A0A0K9PPG6_ZOSMR	1.620e-111	86.11	ADP-ribosylation factor n=6 Tax=Liliopsida TaxID=4...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 119..140 score: 35.56 coord: 19..42 score: 52.7 coord: 74..99 score: 33.26 coord: 47..71 score: 33.65
IPR006689	Small GTPase superfamily, ARF/SAR type	SMART	SM00178	sar_sub_1	coord: 3..177 e-value: 9.5E-25 score: 98.2
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 6..176 e-value: 5.2E-79 score: 263.8
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 e-value: 4.4E-131 score: 451.5
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 18..152 e-value: 5.1E-4 score: -59.6
None	No IPR available	PANTHER	PTHR11711:SF368	OS01G0265100 PROTEIN	coord: 1..180
None	No IPR available	PROSITE	PS51417	ARF	coord: 11..177 score: 26.05588
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 16..140 e-value: 2.0E-23 score: 81.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 4..181 e-value: 6.5E-82 score: 275.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..178
IPR024156	Small GTPase superfamily, ARF type	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 1..180
IPR045872	ADP-ribosylation factor 1-5	CDD	cd04150	Arf1_5_like	coord: 18..176 e-value: 3.23762E-123 score: 342.079

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_17	contig	Contig_17:1101031..1101576 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347969	mRNA_3458	Tribonema minus UTEX_B_3156	mRNA	Contig_17 1101031..1101803 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|347969|estExt_Genemark1.C_Ctg_170144 ID=Trimin1|347969|estExt_Genemark1.C_Ctg_170144|Name=jgi.p|Trimin1|347969|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=182bp
MGLAFSRIWERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIG
FNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRV
DAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRH
RQWYIQACCATTGDGLYEGLDWLSATLQKKG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006689	Small_GTPase_ARF/SAR
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase
IPR024156	Small_GTPase_ARF
IPR045872	Arf1-5-like