Trimin1|347958|estExt_Genemark1.C_Ctg_170127 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347958
Unique NameTrimin1|347958|estExt_Genemark1.C_Ctg_170127
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length269
Homology
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BLAST of jgi.p|Trimin1|347958 vs. uniprot
Match: A0A835Z5I7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I7_9STRA)

HSP 1 Score: 449 bits (1154), Expect = 4.980e-158
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0 
Query:    1 MRRVIAALVFAFVGDKCANAFTPAAPNGPAGNNRHIAASSTAQATPTHQLSSWASSIENIASRLDAIIWGGRTGTTSDAAAIAATATPHAVDEEVLRRRGIRHSIVEKRRRSLELEAELQSLLRIAGGKPSKMELNEVHRLSGELEALQAAXXXXXXXXXEAGVHIGNAARAGGGAWRLLFAETARSGSSASGVLXXXXXXXXXXXXXXXXAIGSCAVVTYASQNLRIERGTNGELRVFRRLLAAPECACADGAEQCCSSGEQWFWPL 268
            MRRVIAALVFAFVGDKCANAFTPAAPNGPAGNNRHIAASSTAQATPTHQLSSWASSIENIASRLDAIIWGGRTGTTSDAAAIAATATPHAVDEEVLRRRGIRHSIVEKRRRSLELEAELQSLLRIAGGKPSKMELNEVHRLSGELEALQAAXXXXXXXXXEAGVHIGNAARAGGGAWRLLFAETARSGSSASGVLXXXXXXXXXXXXXXXXAIGSCAVVTYASQNLRIERGTNGELRVFRRLLAAPECACADGAEQCCSSGEQWFWPL
Sbjct:    1 MRRVIAALVFAFVGDKCANAFTPAAPNGPAGNNRHIAASSTAQATPTHQLSSWASSIENIASRLDAIIWGGRTGTTSDAAAIAATATPHAVDEEVLRRRGIRHSIVEKRRRSLELEAELQSLLRIAGGKPSKMELNEVHRLSGELEALQAAXXXXXXXXXEAGVHIGNAARAGGGAWRLLFAETARSGSSASGVLXXXXXXXXXXXXXXXXAIGSCAVVTYASQNLRIERGTNGELRVFRRLLAAPECACADGAEQCCSSGEQWFWPL 268
[Close]
BLAST of jgi.p|Trimin1|347958 vs. uniprot
Match: A0A835YZX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZX8_9STRA)

HSP 1 Score: 126 bits (316), Expect = 2.930e-31
Identity = 100/226 (44.25%), Postives = 119/226 (52.65%), Query Frame = 0 
Query:   53 WASSIENIASRLDAIIWGGRTGTTSDAAAIAATATPHAVDEEVLRRRGIRHSIVEKRRRSLELEAELQSLLRIAGGKPSKMELNEVHRLSGELEALQAAXXXXXXXXXEAGV----HIGNAARAGGGAWRLLFAETARSGSSASGVLXXXXXXXXXXXXXXXXAI-GSCAVVTYASQNLRIERGTNGELRVFRR-----LLAAPECACADGAEQCCSSGEQWFWPL 268
            W+ S+E +A+RLD  IWG       +AAA A   T  A+DEE+LRRR IR ++VE RRR L LEAEL SLLRIAG +PS+ EL  +HR + ELEA+ AA XXXXXXXX          G     GGGAW  L+AE    G+    +L                A  G+   VTY SQNLRI RG  GEL V+RR                         EQWFWPL
Sbjct:   50 WSESLEAVAARLDDFIWGRHWS--DNAAATADDGTAQALDEELLRRRSIRGAVVETRRRCLALEAELTSLLRIAGARPSRTELGAIHRAAAELEAVAAAEXXXXXXXXXXXXXXSPRAGPTTGGGGGAWAALYAEDGVGGARGGRLLLRALGGGGGLAGDVAAAERGAADRVTYVSQNLRIARGPCGELSVYRRSAXXXXXXXXXXXXXXXXXXXXXEAEQWFWPL 273
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347958 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z5I7_9STRA4.980e-158100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZX8_9STRA2.930e-3144.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:967786..969305 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347958mRNA_3439Tribonema minus UTEX_B_3156 mRNAContig_17 967774..969305 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347958|estExt_Genemark1.C_Ctg_170127 ID=Trimin1|347958|estExt_Genemark1.C_Ctg_170127|Name=jgi.p|Trimin1|347958|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=269bp
MRRVIAALVFAFVGDKCANAFTPAAPNGPAGNNRHIAASSTAQATPTHQL
SSWASSIENIASRLDAIIWGGRTGTTSDAAAIAATATPHAVDEEVLRRRG
IRHSIVEKRRRSLELEAELQSLLRIAGGKPSKMELNEVHRLSGELEALQA
AEAAAAAAAAEAGVHIGNAARAGGGAWRLLFAETARSGSSASGVLLRRVL
RRSGAAAAAAAAIGSCAVVTYASQNLRIERGTNGELRVFRRLLAAPECAC
ADGAEQCCSSGEQWFWPL*
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