Trimin1|347956|estExt_Genemark1.C_Ctg_170123 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347956
Unique NameTrimin1|347956|estExt_Genemark1.C_Ctg_170123
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length310
Homology
BLAST of jgi.p|Trimin1|347956 vs. uniprot
Match: A0A835Z7Q3_9STRA (Polyketide_cyc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q3_9STRA)

HSP 1 Score: 604 bits (1557), Expect = 4.480e-218
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0
Query:    1 MRCLLLLALGLAAVAARKELTPHPHQGLSDPYPPGKPETELASKDIQLLRDGKLVQQSFKKGGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEVETFRNGTEAIKTRMVMNVFGAKFDNHIYHTYFKSLSSLTWTLDYARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKAVSEANMWLKREAEAKFAKDKVSGQQLGKRGGTGGGVFGGFSLKGAGQHAAAPAAVXXXXXXXXEFTIAGTALGVARKAATFGVGYGAGWFMHARAVRRRSEEE 309
            MRCLLLLALGLAAVAARKELTPHPHQGLSDPYPPGKPETELASKDIQLLRDGKLVQQSFKKGGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEVETFRNGTEAIKTRMVMNVFGAKFDNHIYHTYFKSLSSLTWTLDYARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKAVSEANMWLKREAEAKFAKDKVSGQQLGKRGGTGGGVFGGFSLKGAGQHAAAPAAVXXXXXXXXEFTIAGTALGVARKAATFGVGYGAGWFMHARAVRRRSEEE
Sbjct:    1 MRCLLLLALGLAAVAARKELTPHPHQGLSDPYPPGKPETELASKDIQLLRDGKLVQQSFKKGGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEVETFRNGTEAIKTRMVMNVFGAKFDNHIYHTYFKSLSSLTWTLDYARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKAVSEANMWLKREAEAKFAKDKVSGQQLGKRGGTGGGVFGGFSLKGAGQHAAAPAAVXXXXXXXXEFTIAGTALGVARKAATFGVGYGAGWFMHARAVRRRSEEE 309          
BLAST of jgi.p|Trimin1|347956 vs. uniprot
Match: D8LT21_ECTSI (Polyketide_cyc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT21_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 2.240e-83
Identity = 132/236 (55.93%), Postives = 161/236 (68.22%), Query Frame = 0
Query:    3 CLLLLALGLAAVAARKELTPHPHQGLSDPYPPGKPETELASKDIQLLRDGKLVQQSFK-----KGGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEVETFRNGTEAIKTRMVMNVFGAKFDNHIYHTYFKSLSSLTWTLDYARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKAVSEANMWLKREAEAKFAKDKVSGQQLG 233
            C+L L  G+A  +A  E   HPHQG   PY PG P+  L  K    L  G LVQ   K      GG  GRALAVQD++AP +YVWDRILDFGNY KMVPKV +C NYE ET RNGTE IKT + +NVFG K ++  YHTYF S SS+TWTLDY ++STLDDSVG+W+V   P + KQ   +WSRVYYS  LR+P W+PGIV+ +L KKA+ EA  W+KRE+E K+  D  +G+ LG
Sbjct:   30 CMLFLP-GVAQGSAAAEA--HPHQGKVKPYKPGMPDIVLTKKQRTDLDGGDLVQDMLKGETDEDGGKGGRALAVQDVNAPAEYVWDRILDFGNYNKMVPKVTECKNYETETLRNGTEIIKTNLKLNVFGVKLNSFFYHTYFPSKSSMTWTLDYTKKSTLDDSVGFWHVATHPSQDKQ--ADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKYKADFAAGRTLG 260          
BLAST of jgi.p|Trimin1|347956 vs. uniprot
Match: A0A7S2R0C2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0C2_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.740e-52
Identity = 92/208 (44.23%), Postives = 124/208 (59.62%), Query Frame = 0
Query:   22 PHPHQGLSDPYPPGKPETELASKDIQLLRDGKLVQQSFKKGGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEVETFRNG-----TEAIKTRMVMNVFGAKFDNHIYHTYFKSLSSLTWTLDYARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKAVSEANMWLKREAEAKFAK 224
            PHPH G   P+ PG P+  L  K +Q+L  GK  +     G G GR L VQD+HAP D VW RILD+ NY KMVPK V   NY+V   +       +E I TRM + +   K +  I H Y+ SL+SLTWTLDY ++S  DDS GYWY+ P PDK     Q W+RVYYS  + +  W+P   ++F+  KA+ +A  W+K+ +E ++ K
Sbjct:   36 PHPHNGKVTPFEPGDPKVPLDGKALQILESGKPYKTQIDSGAG-GRGLVVQDVHAPSDVVWGRILDYDNYSKMVPKTVDSRNYDVTKMKPSKKDPLSEIIFTRMKVGLPLLKLEFFIKHLYYPSLNSLTWTLDYTKKSDFDDSCGYWYIIPHPDKP----QSWTRVYYSVEVSMFDWIPKFALDFISAKALVDATAWVKKFSELEYQK 238          
BLAST of jgi.p|Trimin1|347956 vs. uniprot
Match: A0A6U4DG12_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4DG12_9STRA)

HSP 1 Score: 182 bits (461), Expect = 3.530e-51
Identity = 95/219 (43.38%), Postives = 132/219 (60.27%), Query Frame = 0
Query:   14 VAARKELTPHPHQGLSDPYPPGKPETELASKDIQLLRDGKLVQQSFK-KGGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEVE----TFRNGTE-AIKTRMVMNV-FGAKFDNHIYHTYFKSLSSLTWTLDYARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKAVSEANMWLKREAEAKFAKD 225
            + A     PH H+G  DP+ PG P   L SK + +L  G+  Q +    G  +GR L VQ++HAPPD VWDRILDF +Y  MVP+  +C NY+ +    T R+  E  I T+  + +    K   ++ H Y+ +LSSLTWTLDY+++S  DDSVGYWYV P PD+       WSRVYYS  + +  WVP  VVNF+  KA+++A  W+K+ +E K+  D
Sbjct:   44 ILASDPSVPHAHKGKQDPFSPGDPNVSLDSKALSILSSGQPFQTTIHVPGSTSGRGLVVQEVHAPPDAVWDRILDFNHYADMVPRTFECKNYDEQKHKATKRDPLEQTIYTKFKVGLPLIPKMSFYVKHLYYPTLSSLTWTLDYSKKSDFDDSVGYWYVVPHPDRLG-----WSRVYYSIAVSMFDWVPKTVVNFMSTKALTDATGWVKKFSEEKWKSD 257          
BLAST of jgi.p|Trimin1|347956 vs. uniprot
Match: A0A4D9DD14_9STRA (Polyketide_cyc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DD14_9STRA)

HSP 1 Score: 176 bits (447), Expect = 3.110e-50
Identity = 92/214 (42.99%), Postives = 126/214 (58.88%), Query Frame = 0
Query:   25 HQGLSDPYPPGKPETELASKDIQLLRDGKLVQQSFKKGGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEVE-TFRNGTEAIKTRMVMNVFGAKFDNHIYHTYFKSLSSLTWTLDYARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKA--VSEANMWLKREAEAKFAKDKVSGQQLGKR 235
            H GL  P+ PG P   L   +++ LR G+ V+Q    G G GR L +QD+ APP+ VW RI+DF  Y +MVP+V  C NY V+  +  G + I TRM + V G   +  I+H YF  L+++ WTLDY R S LDDSVGYW+V P PD    D + WSRVYYS  +R+  W+P  V N L+ +A  +S+    ++   E    + K +G  LGKR
Sbjct:   37 HNGLVKPFKPGPPSIRLKKTEVEKLRKGEAVKQQLSSGSG-GRGLVIQDVEAPPEVVWGRIMDFPAYTRMVPRVSLCENYRVQDNYLQGLKEIFTRMRLTVMGFNVEYFIHHKYFPKLNTVVWTLDYNRESDLDDSVGYWHVIPHPDP---DREHWSRVYYSIDMRLKSWMPSFVKNVLKNQAPDLSKVRDNMREARENWCRRLKEAGASLGKR 246          
BLAST of jgi.p|Trimin1|347956 vs. uniprot
Match: A0A7S0I6R2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6R2_9EUKA)

HSP 1 Score: 176 bits (445), Expect = 4.010e-49
Identity = 100/220 (45.45%), Postives = 126/220 (57.27%), Query Frame = 0
Query:    1 MRCLLLLALGLAAVAARKELTPHPHQGLSDPYPPGKPETELASKDIQLLRDGKLV-QQSFKKGGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEVETFRNGTEAIKTRMVMNVFGAKFDNHIYHTYFKSLSSLTWTLDYARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKAVSEANMWLKREAE 219
            MR LL L L L A  A     PH + G++ P+   KP+  L   +   L  G+ V +Q     G  GRALAVQD+ A P+ VW+RIL F  YPKMV  V +C+ Y+  T RNGT+ I+TRM + V G   +  I HTY   L  LTWTLDYAR S L DSVGYW V P            SRV+YS    +P WVPG VV  + KKA+++A  W+K E+E
Sbjct:   22 MRLLLCLLLQLRAGRAADASKPHMNGGVNPPFASAKPQVSLTGSEETALAAGRAVTRQVANANGKGGRALAVQDVAASPETVWNRILAFPEYPKMVTGVQECSVYDTSTHRNGTQTIRTRMKLGVMGVSLEYFIEHTYAPRLGVLTWTLDYARLSDLIDSVGYWAVVPHARTPGA-----SRVFYSVDAALPSWVPGFVVTAVTKKALTDATSWVKVESE 236          
BLAST of jgi.p|Trimin1|347956 vs. uniprot
Match: A0A4D9CYH6_9STRA (Polyketide_cyc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYH6_9STRA)

HSP 1 Score: 177 bits (448), Expect = 6.500e-49
Identity = 87/211 (41.23%), Postives = 126/211 (59.72%), Query Frame = 0
Query:   22 PHPHQGLSDPYPPGKPETELASKDIQLLRDGKLVQQSFKKGGGAG-RALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEVETFRNGTEAIKTRMVMNVFGAKFDNHIYHTYFKSLSSLTWTLDYARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKAVSEANMWLKREAEAKFAKDKVSGQQ 231
            PH H+G+ + Y    P   L    ++ L  G  V++  +  G AG R + VQD+HAP   V DRILDF NY KMVP V +C NY      +G   ++TR V+++ G K +  + H Y  S+ +LTWTLDY R+S L+D+ GYW V P   + K  V +WSRV+YS  LR+P WVP +VVN L  +A++ A  W+K ++E  +    +SG++
Sbjct:   68 PHTHRGMLEKYELKVPRLALDKAAVERLERGYPVKKQIQAAGRAGGRGIVVQDVHAPASVVMDRILDFDNYNKMVPNVAQCGNYAKRKLMHGDVELRTRYVLSIIGFKLEYFVRHLYRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGK--VGDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSERAYQTSALSGER 276          
BLAST of jgi.p|Trimin1|347956 vs. uniprot
Match: A0A7S4NBB6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NBB6_9STRA)

HSP 1 Score: 170 bits (431), Expect = 9.780e-48
Identity = 90/220 (40.91%), Postives = 129/220 (58.64%), Query Frame = 0
Query:   11 LAAVAARKELTPHPHQGLSDPYPPGKPETELASKDIQLLRDGKLVQQSFKKGGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEV----ETFRNGTE-AIKTRMVMNVFGAKFDNHIYHTYFKSLSSLTWTLDYARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKAVSEANMWLKREAEAKFAKD 225
            + AV A     PH H+G+ DP+ PG P+ +L      +L  G+  Q   + G  +GR L VQD+ AP + VW RILD+ +Y  MVP+ V+  NYEV     + +N  E  I TRM +     K +  + H ++ SL SLTWTLDY ++S LDDS GYWYV P PD    D    +RVYYS  + +  W P  VV+F+  +A+++A  W+K+ +E ++AKD
Sbjct:   32 IPAVRASDFSAPHAHRGVVDPFRPGDPKVKLDGGARSVLGSGRPYQAQIRSGSSSGRGLVVQDVDAPTECVWSRILDYDHYSDMVPRTVESQNYEVVQHKPSKKNPLERTIYTRMKVGFPMIKLEFFVRHMHYPSLRSLTWTLDYTKKSDLDDSCGYWYVIPHPD----DPDRRTRVYYSVQVSMFDWAPKFVVDFMSSRALTDATGWVKKYSELEWAKD 247          
BLAST of jgi.p|Trimin1|347956 vs. uniprot
Match: A0A6U3P4E9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3P4E9_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.350e-47
Identity = 96/215 (44.65%), Postives = 128/215 (59.53%), Query Frame = 0
Query:   22 PHPHQGLSDPYPPGKPETELASKDIQLLRDGKLVQQSFKKGGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEV----ETFRNGTE-AIKTRMVMNVFGAKFDNHIYHTYFKSLSSLTWTLDYARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKAVSEANMWLKREAE---AKFAKDKVS 228
            PH HQG+  P+  G P+ +L  K + +L  GK  Q   + G  AGR + VQD+ AP D VW RILD+ NY  MVPK V+  NY+V     T  N  E  I TRM +     K +  I H YF S +SLTWTLDY + S  +DS GYWYV P PDK      +W+RVYYS  + +  WVP  VV+F+  KA+++A  W+K+ +E   +K AK++VS
Sbjct:   33 PHSHQGVVTPFERGDPKVKLDKKALTILTSGKPYQTQIQSGT-AGRGMVVQDIDAPTDVVWGRILDYDNYANMVPKTVESKNYKVIDHKPTKANPLEQTIYTRMKVGFPMLKLEFFIKHLYFPSENSLTWTLDYDKSSDFNDSCGYWYVVPHPDKP-----DWTRVYYSVEVALFDWVPKFVVDFMSSKALTDATAWVKKYSELEWSKQAKNRVS 241          
BLAST of jgi.p|Trimin1|347956 vs. uniprot
Match: A0A4P5W088_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A4P5W088_9DELT)

HSP 1 Score: 164 bits (416), Expect = 1.940e-46
Identity = 85/209 (40.67%), Postives = 126/209 (60.29%), Query Frame = 0
Query:   11 LAAVAARKELTPHPHQGLSDPYPPGKPETELASKDIQLLRDGKLVQQSFKKGGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVKCNNYEVETFRNGTEAIKTRMVMNVFGAKFDNHIYHTYFKSLSSLTWTLDYARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKAVSEANMWLKREAE 219
            +A+V A     PHPH+G+  PY    P   L+S D+  L  GK+V +  +   G GR + V +++A P  +W +I+D+ +YPKMV KV +C NY V    +G E + TR ++NV GA  + +I+H+Y    S LTWTLDY+R+S LDDSVGYW V P   +        SR+ YS  +R   +VPG + + + KK +++A  W+KRE+E
Sbjct:    5 VASVLAADPSAPHPHKGVVTPYTSAPPPVSLSSADLATLSTGKVVLKQQQVASG-GRGVVVVNINATPTRIWSKIVDYAHYPKMVDKVAECGNYRV----SGNE-MYTRFLLNVMGADVEYYIHHSYHPEASYLTWTLDYSRKSDLDDSVGYWRVTPLTTEPAL-----SRLEYSVDIRFTGYVPGFIQDAISKKGLTDATSWVKRESE 202          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347956 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z7Q3_9STRA4.480e-218100.00Polyketide_cyc domain-containing protein n=1 Tax=T... [more]
D8LT21_ECTSI2.240e-8355.93Polyketide_cyc domain-containing protein n=2 Tax=E... [more]
A0A7S2R0C2_9STRA1.740e-5244.23Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A6U4DG12_9STRA3.530e-5143.38Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A4D9DD14_9STRA3.110e-5042.99Polyketide_cyc domain-containing protein n=2 Tax=M... [more]
A0A7S0I6R2_9EUKA4.010e-4945.45Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A4D9CYH6_9STRA6.500e-4941.23Polyketide_cyc domain-containing protein n=2 Tax=M... [more]
A0A7S4NBB6_9STRA9.780e-4840.91Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
A0A6U3P4E9_9STRA1.350e-4744.65Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A4P5W088_9DELT1.940e-4640.67Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 71..221
e-value: 3.8E-6
score: 28.7
IPR005031Coenzyme Q-binding protein COQ10, START domainPFAMPF03364Polyketide_cyccoord: 75..209
e-value: 1.3E-6
score: 28.6
NoneNo IPR availableCDDcd07812SRPBCCcoord: 73..220
e-value: 5.32142E-5
score: 40.3844
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 73..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:921808..926789 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347956mRNA_3435Tribonema minus UTEX_B_3156 mRNAContig_17 921434..926792 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347956|estExt_Genemark1.C_Ctg_170123 ID=Trimin1|347956|estExt_Genemark1.C_Ctg_170123|Name=jgi.p|Trimin1|347956|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=310bp
MRCLLLLALGLAAVAARKELTPHPHQGLSDPYPPGKPETELASKDIQLLR
DGKLVQQSFKKGGGAGRALAVQDLHAPPDYVWDRILDFGNYPKMVPKVVK
CNNYEVETFRNGTEAIKTRMVMNVFGAKFDNHIYHTYFKSLSSLTWTLDY
ARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVN
FLEKKAVSEANMWLKREAEAKFAKDKVSGQQLGKRGGTGGGVFGGFSLKG
AGQHAAAPAAVEEEEDEDEEFTIAGTALGVARKAATFGVGYGAGWFMHAR
AVRRRSEEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR005031COQ10_START